mRNA_H-paniculata_contig42317.10824.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig42317.10824.1 vs. uniprot
Match: D8LD91_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD91_ECTSI) HSP 1 Score: 120 bits (302), Expect = 1.330e-30 Identity = 59/74 (79.73%), Postives = 64/74 (86.49%), Query Frame = 1
Query: 13 DHRQECWFCLASPTLEDHLVCSVADEVYLAQPKARSKRSLVPGHVLIIPVSHQQRYSELSVEGAQEAERYKQSF 234
D R ECWFCLASP LEDHLVCSVADE+YLAQPK LVPGHVLI+PVSHQQRYSELS EGA+EAE+YK+SF
Sbjct: 253 DGRLECWFCLASPQLEDHLVCSVADEIYLAQPKG----GLVPGHVLIVPVSHQQRYSELSAEGAKEAEQYKESF 322
BLAST of mRNA_H-paniculata_contig42317.10824.1 vs. uniprot
Match: A0A836CFA8_9STRA (CwfJ C-terminus 1-domain-containing protein-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFA8_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 5.950e-18 Identity = 42/71 (59.15%), Postives = 53/71 (74.65%), Query Frame = 1
Query: 13 DHRQECWFCLASPTLEDHLVCSVADEVYLAQPKARSKRSLVPGHVLIIPVSHQQRYSELSVEGAQEAERYK 225
D ++ECWFCLASPTLE+HLV +VA+E Y+A PK LVP HVLI+P++H QRYSELS +E E +K
Sbjct: 602 DQQRECWFCLASPTLEEHLVTNVAEEAYVALPKG----GLVPDHVLIVPIAHIQRYSELSDACVKEVEAFK 668
BLAST of mRNA_H-paniculata_contig42317.10824.1 vs. uniprot
Match: A0A7S2F7S3_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F7S3_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 7.290e-14 Identity = 38/76 (50.00%), Postives = 46/76 (60.53%), Query Frame = 1
Query: 7 PPDHRQECWFCLASPTLEDHLVCSVADEVYLAQPKARSKRSLVPGHVLIIPVSHQQRYSELSVEGAQEAERYKQSF 234
P R +CWFCLASP LE HL+ SVA+ VYLA PK +VP HVL++P+ H R S+L E RYKQ
Sbjct: 117 PSFERHDCWFCLASPQLEAHLIVSVAEHVYLAIPKG----GMVPQHVLLVPIDHVTRQSDLGPPVLSELLRYKQGL 188
BLAST of mRNA_H-paniculata_contig42317.10824.1 vs. uniprot
Match: T0PL36_SAPDV (HIT domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0PL36_SAPDV) HSP 1 Score: 72.8 bits (177), Expect = 3.170e-13 Identity = 34/73 (46.58%), Postives = 46/73 (63.01%), Query Frame = 1
Query: 16 HRQECWFCLASPTLEDHLVCSVADEVYLAQPKARSKRSLVPGHVLIIPVSHQQRYSELSVEGAQEAERYKQSF 234
+R ECWFCLA+PT+E HL+ S+ DE Y+A PK +VP HVLIIP+ H LS A E +++K +
Sbjct: 283 NRSECWFCLATPTVETHLIVSIGDEAYVAIPKG----PIVPDHVLIIPIQHVSSMRSLSPAAAAEVDKFKSAL 351
BLAST of mRNA_H-paniculata_contig42317.10824.1 vs. uniprot
Match: C3Y265_BRAFL (Uncharacterized protein n=3 Tax=Branchiostoma TaxID=7737 RepID=C3Y265_BRAFL) HSP 1 Score: 72.4 bits (176), Expect = 4.360e-13 Identity = 37/76 (48.68%), Postives = 45/76 (59.21%), Query Frame = 1
Query: 7 PPDHRQECWFCLASPTLEDHLVCSVADEVYLAQPKARSKRSLVPGHVLIIPVSHQQRYSELSVEGAQEAERYKQSF 234
PP CWFCLASP +E HLV SV D YLA K LVP HVLI+P+ H Q E++ E +E E+YK +
Sbjct: 316 PPKPTGPCWFCLASPEVEKHLVVSVGDHTYLALAKG----GLVPDHVLILPIGHYQSMVEVTAEVHEEIEKYKSAL 387
BLAST of mRNA_H-paniculata_contig42317.10824.1 vs. uniprot
Match: A0A1V9YNL6_9STRA (HIT domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YNL6_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 5.890e-13 Identity = 32/73 (43.84%), Postives = 48/73 (65.75%), Query Frame = 1
Query: 16 HRQECWFCLASPTLEDHLVCSVADEVYLAQPKARSKRSLVPGHVLIIPVSHQQRYSELSVEGAQEAERYKQSF 234
+R+ECWFCLA+PT+E HL+ S+ DE Y+A PK +VP HVLI+P+ H + L A E +R++++
Sbjct: 276 YREECWFCLATPTVETHLLVSIGDEAYVAIPKG----PIVPDHVLIVPIQHVSSMAALKPAAAAEVQRFQEAL 344
BLAST of mRNA_H-paniculata_contig42317.10824.1 vs. uniprot
Match: UPI001B7EC605 (CWF19-like protein 1 n=2 Tax=Acipenseroidei TaxID=186622 RepID=UPI001B7EC605) HSP 1 Score: 71.6 bits (174), Expect = 8.150e-13 Identity = 37/73 (50.68%), Postives = 43/73 (58.90%), Query Frame = 1
Query: 7 PPDHRQECWFCLASPTLEDHLVCSVADEVYLAQPKARSKRSLVPGHVLIIPVSHQQRYSELSVEGAQEAERYK 225
PP CWFCLASP +E HLV S+ YLA K SL P HVLI+P+ H Q ELS E +E E+YK
Sbjct: 324 PPQPTGPCWFCLASPEVEKHLVVSIGTHCYLALAKG----SLTPDHVLILPIGHYQSVVELSSEVVEEVEKYK 392
BLAST of mRNA_H-paniculata_contig42317.10824.1 vs. uniprot
Match: A0A444UI71_ACIRT (CWF19-like protein 1 n=1 Tax=Acipenser ruthenus TaxID=7906 RepID=A0A444UI71_ACIRT) HSP 1 Score: 71.6 bits (174), Expect = 8.190e-13 Identity = 37/73 (50.68%), Postives = 43/73 (58.90%), Query Frame = 1
Query: 7 PPDHRQECWFCLASPTLEDHLVCSVADEVYLAQPKARSKRSLVPGHVLIIPVSHQQRYSELSVEGAQEAERYK 225
PP CWFCLASP +E HLV S+ YLA K SL P HVLI+P+ H Q ELS E +E E+YK
Sbjct: 468 PPQPTGPCWFCLASPEVEKHLVVSIGTHCYLALAKG----SLTPDHVLILPIGHYQSVVELSSEVVEEVEKYK 536
BLAST of mRNA_H-paniculata_contig42317.10824.1 vs. uniprot
Match: A0A1S3QHP3_SALSA (CWF19-like protein 1 n=1 Tax=Salmo salar TaxID=8030 RepID=A0A1S3QHP3_SALSA) HSP 1 Score: 70.1 bits (170), Expect = 1.220e-12 Identity = 36/73 (49.32%), Postives = 43/73 (58.90%), Query Frame = 1
Query: 7 PPDHRQECWFCLASPTLEDHLVCSVADEVYLAQPKARSKRSLVPGHVLIIPVSHQQRYSELSVEGAQEAERYK 225
PP CWFCLASP +E HLV S+ YLA K SL P HVL++P+ H Q ELS E +E +RYK
Sbjct: 94 PPQPSGPCWFCLASPQVEKHLVISIGTHCYLALAKG----SLTPQHVLVLPIGHYQSVVELSSEVVKELDRYK 162
BLAST of mRNA_H-paniculata_contig42317.10824.1 vs. uniprot
Match: A0A423TTH4_PENVA (CWF19-like protein 1 n=4 Tax=Penaeus TaxID=133894 RepID=A0A423TTH4_PENVA) HSP 1 Score: 70.9 bits (172), Expect = 1.520e-12 Identity = 36/73 (49.32%), Postives = 46/73 (63.01%), Query Frame = 1
Query: 7 PPDHRQECWFCLASPTLEDHLVCSVADEVYLAQPKARSKRSLVPGHVLIIPVSHQQRYSELSVEGAQEAERYK 225
PP CWFCLASP +E HLV SV + VYLA K LVP H+LI+P++H Q S+L + QE E++K
Sbjct: 315 PPKPTGPCWFCLASPEVEKHLVVSVGEHVYLALAKG----GLVPEHLLILPITHFQSTSDLDGDSRQEVEKFK 383 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig42317.10824.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig42317.10824.1 >prot_H-paniculata_contig42317.10824.1 ID=prot_H-paniculata_contig42317.10824.1|Name=mRNA_H-paniculata_contig42317.10824.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=78bp QYPPDHRQECWFCLASPTLEDHLVCSVADEVYLAQPKARSKRSLVPGHVLback to top mRNA from alignment at H-paniculata_contig42317:361..1181- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig42317.10824.1 ID=mRNA_H-paniculata_contig42317.10824.1|Name=mRNA_H-paniculata_contig42317.10824.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=821bp|location=Sequence derived from alignment at H-paniculata_contig42317:361..1181- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig42317:361..1181- >mRNA_H-paniculata_contig42317.10824.1 ID=mRNA_H-paniculata_contig42317.10824.1|Name=mRNA_H-paniculata_contig42317.10824.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=468bp|location=Sequence derived from alignment at H-paniculata_contig42317:361..1181- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |