mRNA_H-paniculata_contig4222.10819.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig4222.10819.1 vs. uniprot
Match: A0A6H5KID0_9PHAE (Beta_elim_lyase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KID0_9PHAE) HSP 1 Score: 283 bits (725), Expect = 2.110e-87 Identity = 138/169 (81.66%), Postives = 149/169 (88.17%), Query Frame = 1
Query: 1 RRGRVALMSERRGLWPTRPPIDLRSDTVTVPTPGMRKAMHKAEVGDDVLGEDPTVKKLEAETAELLGKEAALFVPSGTMANLICHLVWCSQRGSEMILGDQSHSFLWEQANAAQFGGIGYRPLRNQPDGTIDLNQIEAGGGGNNPCFPVSRRVSIENTQGQGGGKGLPL 507
R G V +MSERRGLWP RP IDLRSDTVT PT GMRKAMHKAEVGDDVLGEDPTV++LEAETAE+LGKEAALFVPSGTMANLICHL+WCS RGSEMI+GDQSHSFLWEQANAAQFGGIGYRPL N PDGT+DL +EA GNNPCFPVSR V++ENT Q GGK LP+
Sbjct: 77 RAGLVVMMSERRGLWPGRPTIDLRSDTVTQPTGGMRKAMHKAEVGDDVLGEDPTVQRLEAETAEVLGKEAALFVPSGTMANLICHLIWCSNRGSEMIVGDQSHSFLWEQANAAQFGGIGYRPLTNLPDGTMDLRAVEAAVRGNNPCFPVSRLVTVENTHAQRGGKVLPI 245
BLAST of mRNA_H-paniculata_contig4222.10819.1 vs. uniprot
Match: A0A836CDC2_9STRA (Pyridoxal phosphate-dependent transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDC2_9STRA) HSP 1 Score: 207 bits (526), Expect = 5.770e-60 Identity = 101/155 (65.16%), Postives = 118/155 (76.13%), Query Frame = 1
Query: 37 GLWPTRPPIDLRSDTVTVPTPGMRKAMHKAEVGDDVLGEDPTVKKLEAETAELLGKEAALFVPSGTMANLICHLVWCSQRGSEMILGDQSHSFLWEQANAAQFGGIGYRPLRNQPDGTIDLNQIEAGGGGNNPCFPVSRRVSIENTQGQGGGKGL 501
GLWP +P +D RSDTVT PTP MRK M KAEVGDDV GEDPT+ K E E A LLGKEAALFVP+GTMANLI LVWC +RG+EMI+GD+SH FLWEQAN AQFGGIGYRPL DGT+D + I A G N +P++R +++ENT GG+ L
Sbjct: 6 GLWPKKPSLDFRSDTVTQPTPQMRKCMAKAEVGDDVFGEDPTINKFEKEVAALLGKEAALFVPTGTMANLIAELVWCDRRGAEMIVGDRSHMFLWEQANGAQFGGIGYRPLPTLADGTLDPDAIAAAVRGANIHYPITRLIALENTHNGCGGRVL 160
BLAST of mRNA_H-paniculata_contig4222.10819.1 vs. uniprot
Match: A0A3M1FGL0_9CHLR (Low-specificity L-threonine aldolase n=1 Tax=Caldilineae bacterium TaxID=2420332 RepID=A0A3M1FGL0_9CHLR) HSP 1 Score: 176 bits (445), Expect = 3.790e-50 Identity = 91/149 (61.07%), Postives = 110/149 (73.83%), Query Frame = 1
Query: 61 IDLRSDTVTVPTPGMRKAMHKAEVGDDVLGEDPTVKKLEAETAELLGKEAALFVPSGTMANLICHLVWCSQRGSEMILGDQSHSFLWEQANAAQFGGIGYRPLRNQPDGTIDLNQIEAGGGGNNPCFPVSRRVSIENTQGQGGGKGLPL 507
IDLRSDTVT PT MR+AM AEVGDDV GEDPTV KL+ AE+LGKEAALFVPSGTM NL L C RG EMILGDQ+H FL+EQ +A GG+ R + NQPDGT+DL Q+EA G+N +P+SR +++ENT + GG+ LP+
Sbjct: 100 IDLRSDTVTQPTEAMRRAMAAAEVGDDVYGEDPTVNKLQEMVAEMLGKEAALFVPSGTMGNLASVLTHCG-RGDEMILGDQAHIFLYEQGGSAAMGGVHPRTVPNQPDGTLDLAQVEAAIRGDNEHYPISRLIAVENTHNRCGGRVLPV 247
BLAST of mRNA_H-paniculata_contig4222.10819.1 vs. uniprot
Match: A0A6A0H5J0_HYAAZ (Beta_elim_lyase domain-containing protein n=1 Tax=Hyalella azteca TaxID=294128 RepID=A0A6A0H5J0_HYAAZ) HSP 1 Score: 173 bits (438), Expect = 1.740e-49 Identity = 89/149 (59.73%), Postives = 109/149 (73.15%), Query Frame = 1
Query: 61 IDLRSDTVTVPTPGMRKAMHKAEVGDDVLGEDPTVKKLEAETAELLGKEAALFVPSGTMANLICHLVWCSQRGSEMILGDQSHSFLWEQANAAQFGGIGYRPLRNQPDGTIDLNQIEAGGGGNNPCFPVSRRVSIENTQGQGGGKGLPL 507
+DLRSDTVT P+ M++AM +A VGDDV GEDPTVK+LE + A LLGKE+AL VPSGTMANLIC L C RGSE+ILGDQSH +W Q AQ G I +R L+N PDG+ L +++A G++P +PV+ V IENTQ GGK LPL
Sbjct: 16 VDLRSDTVTYPSIKMKEAMFRAPVGDDVFGEDPTVKELEKKIASLLGKESALLVPSGTMANLICVLTHCWMRGSEVILGDQSHLHVWAQGGIAQIGNIHHRTLKNLPDGSFSLTELKALVRGDDPHWPVTSLVCIENTQNMLGGKALPL 164
BLAST of mRNA_H-paniculata_contig4222.10819.1 vs. uniprot
Match: A0A3M1LS04_9CHLR (Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3M1LS04_9CHLR) HSP 1 Score: 165 bits (417), Expect = 3.280e-49 Identity = 87/148 (58.78%), Postives = 107/148 (72.30%), Query Frame = 1
Query: 61 IDLRSDTVTVPTPGMRKAMHKAEVGDDVLGEDPTVKKLEAETAELLGKEAALFVPSGTMANLICHLVWCSQRGSEMILGDQSHSFLWEQANAAQFGGIGYRPLRNQPDGTIDLNQIEAGGGGNNPCFPVSRRVSIENTQGQGGGKGLP 504
+DLRSDTVT PTP MR+A+++AEVGDDV GEDPTV +LEA AE +GKEAALFV SGTM NL+ L C RG E+ILGD SH+FL+E +A GGI RPL NQPDGT+ L +IEA +N FP SR +++ENT + G +P
Sbjct: 7 VDLRSDTVTPPTPEMREAIYRAEVGDDVYGEDPTVNRLEAMAAERMGKEAALFVASGTMGNLVALLTHCG-RGDEVILGDLSHTFLYEAGGSAALGGIHPRPLPNQPDGTLRLEEIEAAVRPDNVHFPRSRLIALENTHNRCHGAAIP 153
BLAST of mRNA_H-paniculata_contig4222.10819.1 vs. uniprot
Match: A0A3D0D138_9CHLR (Threonine aldolase (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3D0D138_9CHLR) HSP 1 Score: 167 bits (423), Expect = 4.700e-49 Identity = 87/150 (58.00%), Postives = 108/150 (72.00%), Query Frame = 1
Query: 58 PIDLRSDTVTVPTPGMRKAMHKAEVGDDVLGEDPTVKKLEAETAELLGKEAALFVPSGTMANLICHLVWCSQRGSEMILGDQSHSFLWEQANAAQFGGIGYRPLRNQPDGTIDLNQIEAGGGGNNPCFPVSRRVSIENTQGQGGGKGLPL 507
PIDLRSDTVT PTP MR+AM KAEVGDDV GEDPTV +LEA AE+LGKEAALFVPSGTM NL+C L C RG E+I+GD++H++L+E +A GGI R L NQ +GT+DL Q+ N P ++ +++ENT + GG LPL
Sbjct: 3 PIDLRSDTVTFPTPAMRQAMAKAEVGDDVYGEDPTVNRLEALAAEMLGKEAALFVPSGTMGNLVCLLTHCG-RGDEVIMGDRAHTYLFEAGGSAAVGGIHPRVLPNQSEGTLDLEQVRDAIRSENVHHPRTKLLALENTHNRAGGTVLPL 151
BLAST of mRNA_H-paniculata_contig4222.10819.1 vs. uniprot
Match: A0A540VA35_9CHLR (Low-specificity L-threonine aldolase n=1 Tax=Litorilinea aerophila TaxID=1204385 RepID=A0A540VA35_9CHLR) HSP 1 Score: 171 bits (432), Expect = 5.630e-49 Identity = 93/151 (61.59%), Postives = 109/151 (72.19%), Query Frame = 1
Query: 55 PPIDLRSDTVTVPTPGMRKAMHKAEVGDDVLGEDPTVKKLEAETAELLGKEAALFVPSGTMANLICHLVWCSQRGSEMILGDQSHSFLWEQANAAQFGGIGYRPLRNQPDGTIDLNQIEAGGGGNNPCFPVSRRVSIENTQGQGGGKGLPL 507
P IDLRSDTVT PT MR+AM +AEVGDDV GEDPTV +LEA AELLGKEAA+FV SGTM NL+ L C RG EMILGD SH FL EQ AA GGI RPL N+PDG++DL Q+EA +N +PVSR + +ENT + GG+ L +
Sbjct: 7 PVIDLRSDTVTRPTAAMRQAMFEAEVGDDVYGEDPTVNRLEAMVAELLGKEAAVFVSSGTMGNLVSVLSHCG-RGDEMILGDSSHIFLNEQGGAAALGGIHPRPLPNRPDGSLDLEQVEASIRADNEHYPVSRLICLENTHNRCGGRVLSV 156
BLAST of mRNA_H-paniculata_contig4222.10819.1 vs. uniprot
Match: A0A8K0A9W6_BRALA (Hypp4350 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8K0A9W6_BRALA) HSP 1 Score: 171 bits (432), Expect = 9.220e-49 Identity = 84/149 (56.38%), Postives = 110/149 (73.83%), Query Frame = 1
Query: 61 IDLRSDTVTVPTPGMRKAMHKAEVGDDVLGEDPTVKKLEAETAELLGKEAALFVPSGTMANLICHLVWCSQRGSEMILGDQSHSFLWEQANAAQFGGIGYRPLRNQPDGTIDLNQIEAGGGGNNPCFPVSRRVSIENTQGQGGGKGLPL 507
ID+RSDT+T PTP MR+AM A+VGDDVLGEDPTV L+ + A+LLG EAALFVPSGTM N + C +RGSEM+LGD +H F++EQ +AQ GGI R +RN+PDGT DL ++E+ ++P P++R + +ENTQ GG+ LPL
Sbjct: 18 IDMRSDTITKPTPAMRQAMANADVGDDVLGEDPTVNALQEKAAKLLGMEAALFVPSGTMGNFCSIMAHCWERGSEMLLGDCAHIFIYEQGGSAQLGGIHPRTVRNKPDGTFDLEEVESKVRTSDPHLPITRLICVENTQNICGGRVLPL 166
BLAST of mRNA_H-paniculata_contig4222.10819.1 vs. uniprot
Match: A0A7C1JV65_9CHLR (Low-specificity L-threonine aldolase n=2 Tax=Caldilinea aerophila TaxID=133453 RepID=A0A7C1JV65_9CHLR) HSP 1 Score: 169 bits (429), Expect = 1.050e-48 Identity = 92/149 (61.74%), Postives = 110/149 (73.83%), Query Frame = 1
Query: 61 IDLRSDTVTVPTPGMRKAMHKAEVGDDVLGEDPTVKKLEAETAELLGKEAALFVPSGTMANLICHLVWCSQRGSEMILGDQSHSFLWEQANAAQFGGIGYRPLRNQPDGTIDLNQIEAGGGGNNPCFPVSRRVSIENTQGQGGGKGLPL 507
IDLRSDTVT PTP MR AM +AEVGDDV GEDPTV +LEA AE LGKEAALFVPSGTM NLI L C RG EM+LGDQ+H F +EQ +A GG+ R L N PDGTIDL+Q+ + G++ FPV+R +++ENT + GG+ LPL
Sbjct: 5 IDLRSDTVTKPTPAMRCAMAEAEVGDDVYGEDPTVNRLEALVAERLGKEAALFVPSGTMGNLISILSHCG-RGDEMLLGDQAHIFHYEQGGSAAVGGVHPRILPNCPDGTIDLHQLASSIRGDDEHFPVTRLIALENTHNRCGGRVLPL 152
BLAST of mRNA_H-paniculata_contig4222.10819.1 vs. uniprot
Match: A0A8B7NC86_HYAAZ (probable low-specificity L-threonine aldolase 2 n=1 Tax=Hyalella azteca TaxID=294128 RepID=A0A8B7NC86_HYAAZ) HSP 1 Score: 173 bits (438), Expect = 2.340e-48 Identity = 89/149 (59.73%), Postives = 109/149 (73.15%), Query Frame = 1
Query: 61 IDLRSDTVTVPTPGMRKAMHKAEVGDDVLGEDPTVKKLEAETAELLGKEAALFVPSGTMANLICHLVWCSQRGSEMILGDQSHSFLWEQANAAQFGGIGYRPLRNQPDGTIDLNQIEAGGGGNNPCFPVSRRVSIENTQGQGGGKGLPL 507
+DLRSDTVT P+ M++AM +A VGDDV GEDPTVK+LE + A LLGKE+AL VPSGTMANLIC L C RGSE+ILGDQSH +W Q AQ G I +R L+N PDG+ L +++A G++P +PV+ V IENTQ GGK LPL
Sbjct: 163 VDLRSDTVTYPSIKMKEAMFRAPVGDDVFGEDPTVKELEKKIASLLGKESALLVPSGTMANLICVLTHCWMRGSEVILGDQSHLHVWAQGGIAQIGNIHHRTLKNLPDGSFSLTELKALVRGDDPHWPVTSLVCIENTQNMLGGKALPL 311 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4222.10819.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4222.10819.1 >prot_H-paniculata_contig4222.10819.1 ID=prot_H-paniculata_contig4222.10819.1|Name=mRNA_H-paniculata_contig4222.10819.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=162bp MSERRGLWPTRPPIDLRSDTVTVPTPGMRKAMHKAEVGDDVLGEDPTVKKback to top mRNA from alignment at H-paniculata_contig4222:10965..16342+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4222.10819.1 ID=mRNA_H-paniculata_contig4222.10819.1|Name=mRNA_H-paniculata_contig4222.10819.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5378bp|location=Sequence derived from alignment at H-paniculata_contig4222:10965..16342+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4222:10965..16342+ >mRNA_H-paniculata_contig4222.10819.1 ID=mRNA_H-paniculata_contig4222.10819.1|Name=mRNA_H-paniculata_contig4222.10819.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=972bp|location=Sequence derived from alignment at H-paniculata_contig4222:10965..16342+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |