mRNA_H-paniculata_contig42209.10815.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig42209.10815.1 vs. uniprot
Match: A0A0C9VSW1_SPHS4 (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sphaerobolus stellatus (strain SS14) TaxID=990650 RepID=A0A0C9VSW1_SPHS4) HSP 1 Score: 275 bits (704), Expect = 4.180e-82 Identity = 165/402 (41.04%), Postives = 229/402 (56.97%), Query Frame = 1
Query: 7 MDVDAANLNAPVKEELCANLPPEFSPFSRDIPFVRRLRKSLSGLKQSGRNWNNPLDDFLV*MGLDRSTTDSCLYVSRDEGGETNLLVAVYVDDLVI-ADRREKVDELKRNISHRFRMKDLGSLSCVLGIEVRRHRPNGTIIISQGSYIREVLKIYGFDKCRGVPTPVEEEVKISAPADKPSEPKLFGAVLDNSTEYRSMVGSLMYASTGTRPDIAYAVHQAARRMEGPCREDFSTCKRIFRYLSTVADFGITFGGKSNGHDLERFVDADWAEDAEDRKSTTGYVVFKLNVGAISWCSRKQQLVTWSSTEAEYVAAGEAGKETVYLRELLGSIGFGCRGSTILFKDHKSAINLSRGSGTHCRTKHIGVCWHGVREWIREGILTLKYVQTEDQCADILTKDLSR 1209
MDV A LN +KEE+ NLPP F R + +L+K L GLKQ+ R W L MG R ++ +++ D G ++VAVYVDDL+I + E V ++K+++ +F M DLG +LG+E+ R RP+ T+ ISQ +Y E+L+ +G C+ PTP+E V + KL A +D S Y+S VGSLMY GT PD+A++V ++ P E KR+ RY+ D G+ F G N +E F+DADWA+D +R S TGYV L ISW S+KQ SSTEAEY+AA A KE ++LR + +GF T L+ D++SAI L + S H RTKHI V +H +RE + + + L Y+ TEDQ AD LTK LS+
Sbjct: 315 MDVKTAFLNRDLKEEIYMNLPPGF----RKPGVIWKLKKGLYGLKQASREWYKKLCTEFESMGFRRCNSNHAVFIKDDNG--IRVVVAVYVDDLLIFSSSIEAVKKVKKDLKGKFEMTDLGEAHWILGMEITRDRPSHTLSISQKAYFAEILERFGMSDCKPAPTPMEVGVSLR---------KLSEAEVD-SQHYQSAVGSLMYGMIGTHPDVAHSVGVLSQHCATPGEEHEKGNKRVLRYIKGTTDLGLVFIGSGNTK-IEVFIDADWAQDKNNRHSLTGYVC-TLAGATISWSSKKQSSTAQSSTEAEYMAATHAAKEALWLRMFMRELGFEQDSPTPLYVDNQSAITLVKNSEFHSRTKHINVRYHFIRENVEDEQIELVYIPTEDQVADALTKGLSK 698
BLAST of mRNA_H-paniculata_contig42209.10815.1 vs. uniprot
Match: A0A6S7JEY7_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JEY7_PARCT) HSP 1 Score: 271 bits (694), Expect = 2.410e-81 Identity = 159/412 (38.59%), Postives = 238/412 (57.77%), Query Frame = 1
Query: 7 MDVDAANLNAPVKEELCANLPPEFSPFSRDIPFVRRLRKSLSGLKQSGRNWNNPLDDFLV*MGLDRSTTDSCLYVSRDEGGETNLLVAVYVDDLVIADRRE-KVDELKRNISHRFRMKDLGSLSCVLGIEVRRHRPNGTIIISQGSYIREVLKIYGFDKCRGVPTPVEEEVKISAPADKPSEPKLFGAVLDNSTEYRSMVGSLMYASTGTRPDIAYAVHQAARRMEGPCREDFSTCKRIFRYLSTVADFGITFGGKSNGHDLERFVDADWAEDAEDRKSTTGYVVFKLNVGAISWCSRKQQLVTWSSTEAEYVAAGEAGKETVYLRELLGSIGFGCRGSTILFKDHKSAINLSRGSGTHCRTKHIGVCWHGVREWIREGILTLKYVQTEDQCADILTKDLSRGQCQRLRNLL 1239
MDV A LN +KEE+ P F ++ V RLR+S+ GLKQS R WN+ LD L MG ++T D C+YV ++EGGE ++AVYVDD+++A + + K++E+K+ ++ +F+MKD+G LG++V + + I I Q +Y + VL+ +G + + TPV K+ AD + Y+ VG L+Y ST TRPDIAYAV AR P E + KRI RYL+ D G+ + G + DADWA D +DRKST+GYV F+++ AISW S+KQ V S+ EAEY+ A +E V+L++LL + G ++ +D+++AI +++ + H R KHI + +H +RE + + L+Y TE+ ADI TK LS Q +LR +L
Sbjct: 240 MDVTTAFLNGDLKEEVYMKQPEGFIDKGKEH-LVCRLRRSICGLKQSPRCWNSVLDRKLKNMGFVQTTGDPCIYV-KEEGGEI-FIIAVYVDDILLAGKNDQKINEVKQALAEQFQMKDMGQRHYFLGVKVIQKPDSKEIWIGQEAYTKSVLERFGMESSKPASTPVNPGTKLKKAADDSQRV--------DQVNYQCAVGHLLYLSTKTRPDIAYAVSDVARFSAHPTEEHWIAVKRIMRYLNGTRDMGLLYDGSKTTTSCVGYSDADWAGDLDDRKSTSGYV-FQISNAAISWRSKKQSCVALSTAEAEYMTLASATQEAVWLQQLLSDLKSKPTGPMLILEDNQAAICMAKNAQYHGRAKHIDIKYHFIREHVASAAVKLEYCSTEEMIADIFTKGLSVVQFTKLRKML 639
BLAST of mRNA_H-paniculata_contig42209.10815.1 vs. uniprot
Match: W7TJ26_9STRA (Gag-pol polyprotein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJ26_9STRA) HSP 1 Score: 273 bits (698), Expect = 2.740e-81 Identity = 163/419 (38.90%), Postives = 241/419 (57.52%), Query Frame = 1
Query: 7 MDVDAANLNAPVKEELCANLPPEFSPFSRDI-PFVRRLRKSLSGLKQSGRNWNNPLDDFLV*MGLDRSTTDSCLYVSRDEGGETNLLVAVYVDDLVI-ADRREKVDELKRNISHRFRMKDLGSLSCVLGIEVRRHRPNGTIIISQGSYIREVLKIYGFDKCRGVPTPVEEEVKISAPADKPSEPKLFGAVLDNSTEYRSMVGSLMYASTGTRPDIAYAVHQAARRMEGPCREDFSTCKRIFRYLSTVADFGITFGGKSNGH-DLERFVDADWAEDAEDRKSTTGYVVFKLN----VGAISWCSRKQQLVTWSSTEAEYVAAGEAGKETVYLRELLGSIGFGCRGSTILFKDHKSAINLSRGSGTHCRTKHIGVCWHGVREWIREGILTLKYVQTEDQCADILTKDLSRGQCQRLRNLLM 1242
MDVD A L + ++E++ PP + + + V RLRKSL GLKQSGRNW+ +D + GL S D CLYV GE L++ +YVDDL+I ++ R D+ K++IS F MKDL L +LG+ ++R+R N T+ ISQ YI +L +G C+ V TP+E + K+ G + EY +VGSL+YA+ TRPDIA+AV + ++G +E + KR+ RYL D G+ + G S G L + DAD+A D ++R+ST+GY F L+ V I W +++Q +V SS E+E ++A A + VY+R+LL +GF T++ +D+++ I + TH RTKHI V +H VRE + + L Y+ T+ Q ADILTK LS + +RN +M
Sbjct: 304 MDVDTAYLQSDLEEKVYIKQPPGYEKYGPNGGELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGLHPSYADPCLYVKFASSGEI-LVIVLYVDDLIIGSNSRTMTDKFKQDISREFSMKDLKELDWILGMGIKRNRENRTMEISQTGYIGMMLNKFGMADCKSVLTPMEGTLT-----------KMDGKDVKPDNEYMKLVGSLLYAALVTRPDIAFAVQSLGKHLQGSNKEHWIAAKRVLRYLKGTRDVGLKYTGNSTGSFTLVGYADADYAGDKDNRRSTSGYT-FTLSHGDDVNTIDWKAKQQDVVALSSAESELISACSATQNAVYIRQLLMDLGFKQDEPTVIMEDNQACIAMGNNPITHKRTKHIDVRYHFVREKVESKEVELVYIPTQHQLADILTKPLSSIRLAMIRNRMM 709
BLAST of mRNA_H-paniculata_contig42209.10815.1 vs. uniprot
Match: A0A0S7JP25_9TELE (POLX n=2 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7JP25_9TELE) HSP 1 Score: 262 bits (669), Expect = 8.960e-81 Identity = 154/374 (41.18%), Postives = 222/374 (59.36%), Query Frame = 1
Query: 112 RLRKSLSGLKQSGRNWNNPLDDFLV*MGLDRSTTDSCLYVSRDEGGETNLLVAVYVDDLV-IADRREKVDELKRNISHRFRMKDLGSLSCVLGIEVRRHRPNGTIIISQGSYIREVLKIYGFDKCRGVPTPVEEEVKISAPADKPSEPKLFGAVLDNSTEYRSMVGSLMYASTGTRPDIAYAVHQAARRMEGPCREDFSTCKRIFRYLSTVADFGITFGGKSNGHDLERFVDADWAEDAEDRKSTTGYVVFKLNVGAISWCSRKQQLVTWSSTEAEYVAAGEAGKETVYLRELLGSIGFGCRGSTILFKDHKSAINLSRGSGTHCRTKHIGVCWHGVREWIREGILTLKYVQTEDQCADILTKDLSRGQCQRLR 1230
+++KS+ GLKQS R WN F++ +G +S++D C++V + E ++AVYVDDL+ I + E +DELK + R++MKDLG LS +LGI V + + I + Q YI +LK YG DK V TP + VK+ D S P +D ST Y+SMVGSL+YA+ TRPDIA AV ++ P + KRI RYL + + F N DL F DADWA D +DR STTG + F L+ GA+SW S+KQ V S+ EAEYVA +A +E +LR LL +G + T++ +D++ AI +++ H RTKHI + +H +RE +++G + L+Y T+ ADILTK L+R + + R
Sbjct: 2 QIKKSIYGLKQSPRCWNKEFTTFMMDLGFKQSSSDPCVFVRLSQELE---IIAVYVDDLMLITESTESMDELKLTLQERYKMKDLGELSYILGISVIQDKEKNCICLHQKQYIETILKKYGMDKANPVATPADISVKLKKD-DGVSNP------VDPST-YQSMVGSLLYAAMTTRPDIAQAVSAVSKFNANPNTAHLTAVKRILRYLKGTVNLALKFDCAGN-KDLIGFSDADWAGDLDDRHSTTGNI-FLLSGGAVSWLSKKQATVALSTAEAEYVALSQAAQEGTWLRRLLNDLGMVTK-PTVILEDNQGAIAIAKNPVDHSRTKHIDIRYHYIRECVQDGEVKLEYCPTDKMKADILTKPLARQKFENFR 361
BLAST of mRNA_H-paniculata_contig42209.10815.1 vs. uniprot
Match: A0A7D9M6E1_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9M6E1_PARCT) HSP 1 Score: 262 bits (670), Expect = 9.950e-81 Identity = 147/379 (38.79%), Postives = 230/379 (60.69%), Query Frame = 1
Query: 106 VRRLRKSLSGLKQSGRNWNNPLDDFLV*MGLDRSTTDSCLYVSRDEGGETNLLVAVYVDDLVIADRR-EKVDELKRNISHRFRMKDLGSLSCVLGIEVRRHRPNGTIIISQGSYIREVLKIYGFDKCRGVPTPVEEEVK-ISAPADKPSEPKLFGAVLDNSTEYRSMVGSLMYASTGTRPDIAYAVHQAARRMEGPCREDFSTCKRIFRYLSTVADFGITFGGKSNGHDLERFVDADWAEDAEDRKSTTGYVVFKLNVGAISWCSRKQQLVTWSSTEAEYVAAGEAGKETVYLRELLGSIGFGCRGSTILFKDHKSAINLSRGSGTHCRTKHIGVCWHGVREWIREGILTLKYVQTEDQCADILTKDLSRGQCQRLRNL 1236
V +L KS GLKQS R WN+ LD+ L +G ++ +D C+YV ++G +VA++VDD+++A + EK+ ++K +I+ RF++KD+G L +LG++V + +G + I Q +Y ++K YG + C+ V TPV+ K +SA D +LF N EY+S VGSL+Y S+ TRPDI +AV+ A+ E ++ KRIFRYL ++G+ + +N D F DADWA D DRKST+GY F++N A+SW S+KQ V S+ EAEYVA A +E +++R+LL + +++D++SAI +S+ H R+KHI + +H VR+ + + LT+ Y T AD+ TK + + Q ++LR L
Sbjct: 13 VCKLNKSRYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKEEDGDI--FVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQE--DGKVWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLVSAMEDS----ELF-----NKEEYQSAVGSLLYLSSATRPDITFAVNNVAKFSANFTNEHWTAVKRIFRYLKKTVNYGLLYSENANP-DCVGFSDADWAGDLNDRKSTSGYT-FQINGAAVSWRSKKQTCVALSTAEAEYVALSAAAQEALWMRQLLTDLNVNIDKPMTIYEDNQSAIAMSKNPQFHGRSKHIDIKYHFVRDQVEKKTLTVLYCPTGSMLADLFTKGIPKEQFKKLREL 376
BLAST of mRNA_H-paniculata_contig42209.10815.1 vs. uniprot
Match: A0A7D9KES8_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9KES8_PARCT) HSP 1 Score: 271 bits (693), Expect = 1.060e-80 Identity = 160/412 (38.83%), Postives = 238/412 (57.77%), Query Frame = 1
Query: 7 MDVDAANLNAPVKEELCANLPPEFSPFSRDIPFVRRLRKSLSGLKQSGRNWNNPLDDFLV*MGLDRSTTDSCLYVSRDEGGETNLLVAVYVDDLVIADRRE-KVDELKRNISHRFRMKDLGSLSCVLGIEVRRHRPNGTIIISQGSYIREVLKIYGFDKCRGVPTPVEEEVKISAPADKPSEPKLFGAVLDNSTEYRSMVGSLMYASTGTRPDIAYAVHQAARRMEGPCREDFSTCKRIFRYLSTVADFGITFGGKSNGHDLERFVDADWAEDAEDRKSTTGYVVFKLNVGAISWCSRKQQLVTWSSTEAEYVAAGEAGKETVYLRELLGSIGFGCRGSTILFKDHKSAINLSRGSGTHCRTKHIGVCWHGVREWIREGILTLKYVQTEDQCADILTKDLSRGQCQRLRNLL 1239
MDV A LN +KEE+ F ++ V RLR+S+ GLKQS R WN+ LD L MG ++T D C+YV ++EGGE ++AVYVDD+++A + + K++E+K+ ++ +F+MKD+G L LG++V + I I Q +Y + VL+ +G + + TPV K+ AD + Y+ VG L+Y ST TRPDIAYAV AR P E + KRI RYL+ D G+ + G + DADWA D +DRKST+GYV F+++ AISW S+KQ V S+ EAEY+A A +E V+L++LL + G ++ +D+++AI +++ + H R KHI + +H +RE + + L+Y TE+ ADI TK LS Q +LR +L
Sbjct: 92 MDVTTAFLNGDLKEEVYMKQTEGFIEKGKEH-LVCRLRRSIYGLKQSPRCWNSVLDRKLKNMGFVQTTGDPCIYV-KEEGGEI-FIIAVYVDDILLAGKNDQKINEVKQALAEQFQMKDMGQLHYFLGVKVIPKPDSKEIWIGQEAYTKSVLERFGMESSKPASTPVNPGTKLKKAADDSQRV--------DQVNYQCAVGHLLYLSTKTRPDIAYAVSDVARFSADPTEEHWIAVKRIMRYLNGTRDMGLLYDGSKTTTSCVGYSDADWAGDLDDRKSTSGYV-FQISNAAISWRSKKQSCVALSTAEAEYMALASATQEAVWLQQLLSDLKSKPTGPMLILEDNQAAICMAKNAQYHGRAKHIDIKYHFIREHVASAAVKLEYCSTEEMIADIFTKGLSVVQFTKLRKML 491
BLAST of mRNA_H-paniculata_contig42209.10815.1 vs. uniprot
Match: A0A5S6Q3I8_TRIMR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Trichuris muris TaxID=70415 RepID=A0A5S6Q3I8_TRIMR) HSP 1 Score: 266 bits (681), Expect = 2.380e-80 Identity = 154/412 (37.38%), Postives = 237/412 (57.52%), Query Frame = 1
Query: 7 MDVDAANLNAPVKEELCANLPPEFSPFSRDIPFVRRLRKSLSGLKQSGRNWNNPLDDFLV*MGLDRSTTDSCLYVSRDEGGETNLLVAVYVDDLVIADRREKVD-ELKRNISHRFRMKDLGSLSCVLGIEVRRHRPNGTIIISQGSYIREVLKIYGFDKCRGVPTPVEEEVKISAPADKPSEPKLFGAVLDNSTEYRSMVGSLMYASTGTRPDIAYAVHQAARRMEGPCREDFSTCKRIFRYLSTVADFGITFGGKSNGHDLERFVDADWAEDAEDRKSTTGYVVFKLNVGAISWCSRKQQLVTWSSTEAEYVAAGEAGKETVYLRELLGSIGFGCRGSTILFKDHKSAINLSRGSGTHCRTKHIGVCWHGVREWIREGILTLKYVQTEDQCADILTKDLSRGQCQRLRNLL 1239
+DV AA LN+P++EEL PP F ++ V LRKSL GLKQS R WN D L +G +++ D CL+ +++ G ++ +YVDDL++ K+ E+ + F+ KDLG + LGI++ R +G+I++ Q + I ++L+ YG +C+ PTP+E +S + P P ++T+YR +GSL+Y +T +RPDIA V R +E P D+ KR+ RYL+ + + G DL+ +VDADWA D DRKSTTG+V F+L ++W SRKQ +V SSTEAEY+A A +E ++LR+LL +G + TI+ +D+++ I + RTKH+ VC H VR+ +G + L+Y ++ ADILTK L + + R +L+
Sbjct: 138 LDVKAAYLNSPLEEELYVKQPPGFEVQGQEHK-VLLLRKSLYGLKQSARAWNKMATDTLTSLGFEQAMADHCLFSKKEKNGSRTYIL-IYVDDLLVVGATPKITKEVGIQMDKFFQTKDLGEVKNYLGIQIEREG-DGSILLHQRNKIEQLLEQYGLMECKPAPTPMETGF-LSVNQESPPMP--------DNTKYRQAIGSLLYVATVSRPDIAAPVGFLCRHVEKPTEADWKAVKRVMRYLAATKYMTLRLSS-AGGIDLQCYVDADWAGDKADRKSTTGFV-FQLGKNTVAWSSRKQSVVALSSTEAEYLAVSHACRELLWLRQLLKDLGIAVKDPTIIHEDNQACIKMVNSERYGARTKHVDVCHHHVRDLRAQGTIKLQYCPSDKMRADILTKPLCKDKFSRFAHLI 535
BLAST of mRNA_H-paniculata_contig42209.10815.1 vs. uniprot
Match: A0A7M6DPI8_9CNID (Uncharacterized protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M6DPI8_9CNID) HSP 1 Score: 278 bits (712), Expect = 3.530e-80 Identity = 159/413 (38.50%), Postives = 242/413 (58.60%), Query Frame = 1
Query: 7 MDVDAANLNAPVKEELCANLPPEFSPFSRDIPFVR-RLRKSLSGLKQSGRNWNNPLDDFLV*MGLDRSTTDSCLYVSRDEGGETN--LLVAVYVDDLVIADRREKV-DELKRNISHRFRMKDLGSLSCVLGIEVRRHRPNGTIIISQGSYIREVLKIYGFDKCRGVPTPVEEEVKISAPADKPSEPKLFGAVLDNSTEYRSMVGSLMYASTGTRPDIAYAVHQAARRMEGPCREDFSTCKRIFRYLSTVADFGITFGGKSNGHDL-ERFVDADWAEDAEDRKSTTGYVVFKLNVGAISWCSRKQQLVTWSSTEAEYVAAGEAGKETVYLRELLGSIGFGCRGSTILFKDHKSAINLSRGSGTHCRTKHIGVCWHGVREWIREGILTLKYVQTEDQCADILTKDLSRGQCQRLR 1230
MDV A LN ++E++ P F +RD P + +L+KS+ GLKQS R WN +D+FL G R+ D C+Y + G+ + L+VAVYVDDL+IA ++ E K+ + RF M+D + +LG++V+R R N + I Q +++ VL + ++C+ V TP+E +K AD KL +Y+S +G L YAS GTRPDI+ AV ++ M P ++ + KR+ RYL D+G+ + G +G L F DADWA D + RKST+GYV FK+ +SW S++Q +V S TEAEYVA +A +E ++LR L + F T +F+D++ AI L++ H RTKHI + +H VR+ + + ++ L+Y T++ AD+LTK L R Q ++LR
Sbjct: 886 MDVKTAFLNGDLEEDIFMKQPEGF--INRDNPNMACKLQKSIYGLKQSARCWNEKMDEFLKESGFTRNDADPCIYHKQITKGDKSFTLIVAVYVDDLLIACNNIQILREQKQKLGERFEMEDKSEVHFILGMQVKRDRKNRRLTIDQNAFLSSVLNRFNMNECKPVATPLEPSMKFEKLADDEEIVKL--------KDYQSAIGCLTYASIGTRPDISAAVGVLSQHMSKPGKQHWIGVKRVLRYLKGTLDYGLIYEGSESGDILLHGFADADWAGDIDTRKSTSGYV-FKVGNSTVSWKSKRQSIVALSKTEAEYVALSQATQEVIWLRTLFKGMDFEQTDPTKMFEDNQGAIELAKNQPNHSRTKHIDIKFHHVRDAVAKKVIDLEYCPTDEMIADLLTKGLPRPQFEKLR 1287
BLAST of mRNA_H-paniculata_contig42209.10815.1 vs. uniprot
Match: A0A146H7K8_MYCCL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mycena chlorophos TaxID=658473 RepID=A0A146H7K8_MYCCL) HSP 1 Score: 261 bits (667), Expect = 5.650e-80 Identity = 155/415 (37.35%), Postives = 234/415 (56.39%), Query Frame = 1
Query: 7 MDVDAANLNAPVKEELCANLPPEFSPFSRDIPFVRRLRKSLSGLKQSGRNWNNPLDDFLV*MGLDRSTTDSCLYVSRDEGGETNLLVAVYVDDLVI-ADRREKVDELKRNISHRFRMKDLGSLSCVLGIEVRRHRPNGTIIISQGSYIREVLKIYGFDKCRGVPTPVEEEVKISA---PADKPSEPKLFGAVLDNSTEYRSMVGSLMYASTGTRPDIAYAVHQAARRMEGPCREDFSTCKRIFRYLSTVADFGITFGGKSNGHDLERFVDADWAEDAEDRKSTTGYVVFKLNVGAISWCSRKQQLVTWSSTEAEYVAAGEAGKETVYLRELLGSIGFGCRGSTILFKDHKSAINLSRGSGTHCRTKHIGVCWHGVREWIREGILTLKYVQTEDQCADILTKDLSRGQCQRLRNLL 1239
MD+ A LN +KEE+ PP F + V RL+KS+ GL QSGR+WN D + +GL ++ D+C+Y R+ GE + V V+VDDL+I A +++ + +++ + F MKD+G ++GIEV R R GT+ +SQ YI +L YGF V TP+ + P D P A EY+SM+G LMYA+ TRPDIAYAV + ++ P E + CKR+FRYLS ++G+ +G + +G E + DAD+A + +DRKS +GY + L A +W S+KQ V S+TEAE+ + +A + ++ R L IG+ +T+L+ D++SA+ L+R H ++KH V VRE + GI+ Y T++Q ADI TK L+ + L +L
Sbjct: 1 MDIRGAYLNGELKEEVYMRQPPGFEDGTGR---VWRLKKSIYGLHQSGRDWNREFDRKVQSVGLTKTAADNCVYY-RERDGE-QVWVTVWVDDLIILATSKDEGERVRKELGTLFEMKDMGEPRKIIGIEVTRDRSAGTVTLSQRHYIESLLDRYGFSNLNAVSTPLVPDANTKMRQLPKDAPP------AAPSVRAEYQSMIGGLMYAAICTRPDIAYAVGRLSQFAANPGPEHQAACKRVFRYLSGTRNYGLVYGPQRDGVVFEGYCDADYAANLDDRKSISGYA-YMLAGAAFAWSSKKQTTVATSTTEAEFTSLAQAARFAMWCRNLFAGIGYSQDDATVLYGDNQSALKLTRNPEYHAQSKHFDVSNMFVREKVALGIIDTVYCPTDEQLADIFTKALAEPRHLELTRML 403
BLAST of mRNA_H-paniculata_contig42209.10815.1 vs. uniprot
Match: A0A7D9HZ03_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HZ03_PARCT) HSP 1 Score: 268 bits (685), Expect = 7.080e-80 Identity = 154/412 (37.38%), Postives = 245/412 (59.47%), Query Frame = 1
Query: 7 MDVDAANLNAPVKEELCANLPPEFSPFSRDIPFVRRLRKSLSGLKQSGRNWNNPLDDFLV*MGLDRSTTDSCLYVSRDEGGETNLLVAVYVDDLVIADRR-EKVDELKRNISHRFRMKDLGSLSCVLGIEVRRHRPNGTIIISQGSYIREVLKIYGFDKCRGVPTPVEEEVK-ISAPADKPSEPKLFGAVLDNSTEYRSMVGSLMYASTGTRPDIAYAVHQAARRMEGPCREDFSTCKRIFRYLSTVADFGITFGGKSNGHDLERFVDADWAEDAEDRKSTTGYVVFKLNVGAISWCSRKQQLVTWSSTEAEYVAAGEAGKETVYLRELLGSIGFGCRGSTILFKDHKSAINLSRGSGTHCRTKHIGVCWHGVREWIREGILTLKYVQTEDQCADILTKDLSRGQCQRLRNL 1236
MDV AA LN +++E+ P F ++ +L KSL GLKQS R WN+ LD+ L +G ++ +D C+YV ++G +VA++VDD+++A + EK+ ++K +I+ RF++KD+G L +LG++V + + + I Q +Y ++K YG + C+ V TPV+ K +SA D +LF N E++S VGSL+Y S+ TRPDI +AV+ A+ P E ++ KRIFRYL ++G+ + +N D F DADWA D DRKST+GY F++N A+SW S+KQ V S+ AEYVA A +E +++R+LL + +++D++SAI +S+ H R+KHI + ++ VR+ + + LT+ Y T AD+ TK + + Q ++LR L
Sbjct: 256 MDVTAAFLNGELEDEVYMKQPEGFEVKGKEH-LACKLNKSLYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKEEDGNI--FVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQE--DAKVWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLVSAMEDS----ELF-----NKEEHQSAVGSLLYLSSATRPDITFAVNNVAKFSANPTNEHWTAVKRIFRYLKGTVNYGLLYSENANP-DCVGFSDADWAGDLNDRKSTSGYT-FQINGAAVSWRSKKQTCVALSTAAAEYVALSAAAQEALWMRQLLTDLNVNIDEPMTIYEDNQSAIAMSKNPQFHGRSKHIDIKYYFVRDQVEKKTLTVLYCPTGSMLADLFTKGIPKEQFKKLREL 651 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig42209.10815.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig42209.10815.1 >prot_H-paniculata_contig42209.10815.1 ID=prot_H-paniculata_contig42209.10815.1|Name=mRNA_H-paniculata_contig42209.10815.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=352bp MGLDRSTTDSCLYVSRDEGGETNLLVAVYVDDLVIADRREKVDELKRNISback to top mRNA from alignment at H-paniculata_contig42209:252..1541- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig42209.10815.1 ID=mRNA_H-paniculata_contig42209.10815.1|Name=mRNA_H-paniculata_contig42209.10815.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1290bp|location=Sequence derived from alignment at H-paniculata_contig42209:252..1541- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig42209:252..1541- >mRNA_H-paniculata_contig42209.10815.1 ID=mRNA_H-paniculata_contig42209.10815.1|Name=mRNA_H-paniculata_contig42209.10815.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2112bp|location=Sequence derived from alignment at H-paniculata_contig42209:252..1541- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |