mRNA_H-paniculata_contig422.10809.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig422.10809.1
Unique NamemRNA_H-paniculata_contig422.10809.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig422.10809.1 vs. uniprot
Match: D7FPA4_ECTSI (Uncharacterized protein n=4 Tax=Eukaryota TaxID=2759 RepID=D7FPA4_ECTSI)

HSP 1 Score: 288 bits (738), Expect = 3.380e-93
Identity = 144/146 (98.63%), Postives = 145/146 (99.32%), Query Frame = 1 
Query:  211 MGNEAVLESVQVFGRKKTATAVAYCKRGRGLIKVNGCPIELLEPAILRVKTFEPVLLLGPARFSNVDIRVRVRGGGYTSQIYAIRQAIAKAIVAFYQKYVDEASKREIKELLMAYDRNLLVADPRRCEPKKFGGPSARARYQKSYR 648
            MGNE VLESVQVFGRKKTATAVAYCKRGRGLIKVNGCPIELLEPAILRVKTFEPVLLLGPARFSNVDIRVRVRGGGYTSQIYAIRQAIAKAIVAFYQKYVDEASKREIK+LLMAYDRNLLVADPRRCEPKKFGGPSARARYQKSYR
Sbjct:    1 MGNETVLESVQVFGRKKTATAVAYCKRGRGLIKVNGCPIELLEPAILRVKTFEPVLLLGPARFSNVDIRVRVRGGGYTSQIYAIRQAIAKAIVAFYQKYVDEASKREIKDLLMAYDRNLLVADPRRCEPKKFGGPSARARYQKSYR 146
[Close]
BLAST of mRNA_H-paniculata_contig422.10809.1 vs. uniprot
Match: A0A7S2XX35_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX35_9STRA)

HSP 1 Score: 254 bits (648), Expect = 1.140e-79
Identity = 123/146 (84.25%), Postives = 137/146 (93.84%), Query Frame = 1 
Query:  211 MGNEAVLESVQVFGRKKTATAVAYCKRGRGLIKVNGCPIELLEPAILRVKTFEPVLLLGPARFSNVDIRVRVRGGGYTSQIYAIRQAIAKAIVAFYQKYVDEASKREIKELLMAYDRNLLVADPRRCEPKKFGGPSARARYQKSYR 648
            M   + +ESVQ FGRKKTATAVAYCKRGRGLIKVNGCPIEL++P +LR+KTFEPVLLLG  RF+NVDIRVRV+GGGYT+QIYAIRQAIAKAIVA+YQKYVDEASK+EIK++LM+YDR LLVADPRRCEPKKFGGPSARARYQKSYR
Sbjct:    1 MQKASQVESVQTFGRKKTATAVAYCKRGRGLIKVNGCPIELVQPEMLRLKTFEPVLLLGQQRFANVDIRVRVKGGGYTAQIYAIRQAIAKAIVAYYQKYVDEASKKEIKDILMSYDRALLVADPRRCEPKKFGGPSARARYQKSYR 146
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BLAST of mRNA_H-paniculata_contig422.10809.1 vs. uniprot
Match: A0A7R9YFZ9_9STRA (Hypothetical protein n=2 Tax=Pinguiochrysidaceae TaxID=1004268 RepID=A0A7R9YFZ9_9STRA)

HSP 1 Score: 248 bits (634), Expect = 1.430e-77
Identity = 117/146 (80.14%), Postives = 136/146 (93.15%), Query Frame = 1 
Query:  211 MGNEAVLESVQVFGRKKTATAVAYCKRGRGLIKVNGCPIELLEPAILRVKTFEPVLLLGPARFSNVDIRVRVRGGGYTSQIYAIRQAIAKAIVAFYQKYVDEASKREIKELLMAYDRNLLVADPRRCEPKKFGGPSARARYQKSYR 648
            M   + ++SVQVFGRKKTATAVAYCK GRGLIK+NGCPIE LEP +LR+KT+EPVLLLG  RF++VDIR+RV+GGGY++QIYAIRQAIAK+IVA+YQKYVDEASKREIK++ +AYDR+LLVADPRRCEPKKFGGPSARARYQKSYR
Sbjct:    1 MSERSAIKSVQVFGRKKTATAVAYCKEGRGLIKINGCPIENLEPRVLRLKTYEPVLLLGNQRFADVDIRIRVKGGGYSAQIYAIRQAIAKSIVAYYQKYVDEASKREIKDIFLAYDRSLLVADPRRCEPKKFGGPSARARYQKSYR 146
[Close]
BLAST of mRNA_H-paniculata_contig422.10809.1 vs. uniprot
Match: A0A7S3ZMH9_9STRA (Hypothetical protein n=3 Tax=Ochrophyta TaxID=2696291 RepID=A0A7S3ZMH9_9STRA)

HSP 1 Score: 246 bits (627), Expect = 1.440e-76
Identity = 117/142 (82.39%), Postives = 133/142 (93.66%), Query Frame = 1 
Query:  223 AVLESVQVFGRKKTATAVAYCKRGRGLIKVNGCPIELLEPAILRVKTFEPVLLLGPARFSNVDIRVRVRGGGYTSQIYAIRQAIAKAIVAFYQKYVDEASKREIKELLMAYDRNLLVADPRRCEPKKFGGPSARARYQKSYR 648
            + ++SVQVFGRKK ATAVAYCK+GRGLIKVNGCPIELLEP ILR+KTFEPVLLLG  RF+NVDIR+RV+GGG+T+QIYAIRQAIAK++VA+YQKYVDEASK EI+++LM YDR LLVADPRRCE KKFGGPSARARYQKSYR
Sbjct:    2 SAIQSVQVFGRKKAATAVAYCKQGRGLIKVNGCPIELLEPEILRLKTFEPVLLLGQTRFANVDIRIRVKGGGFTAQIYAIRQAIAKSLVAYYQKYVDEASKTEIRDILMQYDRTLLVADPRRCESKKFGGPSARARYQKSYR 143
[Close]
BLAST of mRNA_H-paniculata_contig422.10809.1 vs. uniprot
Match: F0YH48_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YH48_AURAN)

HSP 1 Score: 243 bits (620), Expect = 1.610e-75
Identity = 116/142 (81.69%), Postives = 133/142 (93.66%), Query Frame = 1 
Query:  223 AVLESVQVFGRKKTATAVAYCKRGRGLIKVNGCPIELLEPAILRVKTFEPVLLLGPARFSNVDIRVRVRGGGYTSQIYAIRQAIAKAIVAFYQKYVDEASKREIKELLMAYDRNLLVADPRRCEPKKFGGPSARARYQKSYR 648
            + ++SVQVFGRKKTATAVAYCK+GRGLIKVNGCPIELLEP ILR+KTFEPVLLLG  RF+NVDIR+RV+GGG+T+QIYAIRQ+IAKA+VA+YQKYVDEASK EI+++LM+YDR LLVAD RRCE KKFGGP ARARYQKSYR
Sbjct:    2 SAIQSVQVFGRKKTATAVAYCKQGRGLIKVNGCPIELLEPEILRLKTFEPVLLLGQHRFANVDIRIRVKGGGFTAQIYAIRQSIAKALVAYYQKYVDEASKTEIRDILMSYDRTLLVADARRCESKKFGGPGARARYQKSYR 143
[Close]
BLAST of mRNA_H-paniculata_contig422.10809.1 vs. uniprot
Match: A0A7S0J187_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J187_9EUKA)

HSP 1 Score: 242 bits (618), Expect = 3.550e-75
Identity = 113/140 (80.71%), Postives = 131/140 (93.57%), Query Frame = 1 
Query:  229 LESVQVFGRKKTATAVAYCKRGRGLIKVNGCPIELLEPAILRVKTFEPVLLLGPARFSNVDIRVRVRGGGYTSQIYAIRQAIAKAIVAFYQKYVDEASKREIKELLMAYDRNLLVADPRRCEPKKFGGPSARARYQKSYR 648
            +ESVQ FGRKKTA AV+YCK+GRGLIK+NGCPIEL+EP ILR K +EP+LLLGP RF+NVDIR+RV+GGGYT+QIYAIRQAIAK++VA+YQKYVDEASKREIK++L +YDR+LLVADPRRCEPKKFGGP ARAR QKSYR
Sbjct:    7 MESVQTFGRKKTAVAVSYCKKGRGLIKINGCPIELVEPEILRHKVYEPILLLGPDRFANVDIRIRVKGGGYTAQIYAIRQAIAKSVVAYYQKYVDEASKREIKDILTSYDRSLLVADPRRCEPKKFGGPGARARRQKSYR 146
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BLAST of mRNA_H-paniculata_contig422.10809.1 vs. uniprot
Match: H3G8T5_PHYRM (Uncharacterized protein n=30 Tax=Oomycota TaxID=4762 RepID=H3G8T5_PHYRM)

HSP 1 Score: 241 bits (616), Expect = 6.620e-75
Identity = 118/143 (82.52%), Postives = 132/143 (92.31%), Query Frame = 1 
Query:  220 EAVLESVQVFGRKKTATAVAYCKRGRGLIKVNGCPIELLEPAILRVKTFEPVLLLGPARFSNVDIRVRVRGGGYTSQIYAIRQAIAKAIVAFYQKYVDEASKREIKELLMAYDRNLLVADPRRCEPKKFGGPSARARYQKSYR 648
            E  +ESVQVFGRKK ATAVAYCKRG GLIKVNG PIEL+EP ILRVKT+EPVLLLG  RF+NVDIR+RV+GGG+T+QIYAIRQAIAKAIVA+YQKYVDEASK+EIK++L+AYDR LLVADPRRCE KKFGG SARAR+QKSYR
Sbjct:    2 EGKIESVQVFGRKKNATAVAYCKRGHGLIKVNGTPIELVEPEILRVKTYEPVLLLGQQRFANVDIRIRVKGGGHTAQIYAIRQAIAKAIVAYYQKYVDEASKKEIKDILLAYDRTLLVADPRRCEAKKFGGGSARARFQKSYR 144
[Close]
BLAST of mRNA_H-paniculata_contig422.10809.1 vs. uniprot
Match: A0A7S4HKN5_9EUKA (Hypothetical protein n=2 Tax=Prymnesiaceae TaxID=418967 RepID=A0A7S4HKN5_9EUKA)

HSP 1 Score: 238 bits (608), Expect = 1.510e-73
Identity = 111/140 (79.29%), Postives = 130/140 (92.86%), Query Frame = 1 
Query:  229 LESVQVFGRKKTATAVAYCKRGRGLIKVNGCPIELLEPAILRVKTFEPVLLLGPARFSNVDIRVRVRGGGYTSQIYAIRQAIAKAIVAFYQKYVDEASKREIKELLMAYDRNLLVADPRRCEPKKFGGPSARARYQKSYR 648
            +ESVQ FGRKKTA AV+YCK+GRGLIKVNGCPIEL+EP +LR K FEP+LLLG  RF+N+DIR+RV+GGGYTSQIYAIRQAIAK++V++YQKYVDEASK+EI+E+L+ YDR+LLVADPRRCEPKKFGGP ARAR QKSYR
Sbjct:   16 VESVQTFGRKKTAVAVSYCKKGRGLIKVNGCPIELVEPEVLRYKVFEPILLLGKERFANMDIRIRVKGGGYTSQIYAIRQAIAKSVVSYYQKYVDEASKQEIREILVQYDRSLLVADPRRCEPKKFGGPGARARRQKSYR 155
[Close]
BLAST of mRNA_H-paniculata_contig422.10809.1 vs. uniprot
Match: I1JE09_SOYBN (Uncharacterized protein n=23 Tax=cellular organisms TaxID=131567 RepID=I1JE09_SOYBN)

HSP 1 Score: 236 bits (601), Expect = 1.730e-72
Identity = 111/143 (77.62%), Postives = 128/143 (89.51%), Query Frame = 1 
Query:  220 EAVLESVQVFGRKKTATAVAYCKRGRGLIKVNGCPIELLEPAILRVKTFEPVLLLGPARFSNVDIRVRVRGGGYTSQIYAIRQAIAKAIVAFYQKYVDEASKREIKELLMAYDRNLLVADPRRCEPKKFGGPSARARYQKSYR 648
            +A LE VQ FGRKKTA AV YCKRGRGLIK+NGCPIEL+EP ILR K FEP+LLLG +RF+ VD+R+RV+GGG+TSQIYAIRQ+IAKA+VAFYQKYVDE SK+EIK++L+ YDR LLVADPRRCEPKKFGG  ARAR+QKSYR
Sbjct:   14 QAALEQVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGKSRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 156
[Close]
BLAST of mRNA_H-paniculata_contig422.10809.1 vs. uniprot
Match: A0A3M6VCS9_9STRA (Sm domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VCS9_9STRA)

HSP 1 Score: 241 bits (615), Expect = 1.740e-72
Identity = 117/146 (80.14%), Postives = 134/146 (91.78%), Query Frame = 1 
Query:  229 LESVQVFGRKKTATAVAYCKRGRGLIKVNGCPIELLEPAILRVKTFEPVLLLGPARFSNVDIRVRVRGGGYTSQIYAIRQAIAKAIVAFYQKYVDEASKREIKELLMAYDRNLLVADPRRCEPKKFGGPSARARYQKSYR*FFLSV 666
            +ESVQVFGRKK ATAVAYCKRG GLIKVNG PIEL+EP ILRVKT+EPVLLLG  RF+NVDIR+RV+GGG+T+QIYAIRQAIAK+IVA+YQKYVDEASK+EIK++L+AYDR LLVADPRRCE KKFGG SARAR+QKSY  ++L V
Sbjct:   22 IESVQVFGRKKNATAVAYCKRGHGLIKVNGTPIELVEPEILRVKTYEPVLLLGQQRFANVDIRIRVKGGGHTAQIYAIRQAIAKSIVAYYQKYVDEASKKEIKDILLAYDRTLLVADPRRCEAKKFGGSSARARFQKSYLVYYLRV 167
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig422.10809.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPA4_ECTSI3.380e-9398.63Uncharacterized protein n=4 Tax=Eukaryota TaxID=27... [more]
A0A7S2XX35_9STRA1.140e-7984.25Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7R9YFZ9_9STRA1.430e-7780.14Hypothetical protein n=2 Tax=Pinguiochrysidaceae T... [more]
A0A7S3ZMH9_9STRA1.440e-7682.39Hypothetical protein n=3 Tax=Ochrophyta TaxID=2696... [more]
F0YH48_AURAN1.610e-7581.69Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S0J187_9EUKA3.550e-7580.71Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
H3G8T5_PHYRM6.620e-7582.52Uncharacterized protein n=30 Tax=Oomycota TaxID=47... [more]
A0A7S4HKN5_9EUKA1.510e-7379.29Hypothetical protein n=2 Tax=Prymnesiaceae TaxID=4... [more]
I1JE09_SOYBN1.730e-7277.62Uncharacterized protein n=23 Tax=cellular organism... [more]
A0A3M6VCS9_9STRA1.740e-7280.14Sm domain-containing protein n=1 Tax=Peronospora e... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig422contigH-paniculata_contig422:2324..7283 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score287.3
Seed ortholog evalue3.9e-75
Seed eggNOG ortholog2880.D7FPA4
Preferred nameRPS16
KEGG koko:K02960,ko:K02996
KEGG Pathwayko03010,map03010
KEGG ModuleM00177,M00178,M00179
Hectar predicted targeting categoryother localisation
GOsGO:0000184,GO:0000462,GO:0000956,GO:0001889,GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005783,GO:0005789,GO:0005791,GO:0005829,GO:0005840,GO:0005844,GO:0005911,GO:0006139,GO:0006259,GO:0006310,GO:0006364,GO:0006396,GO:0006401,GO:0006402,GO:0006412,GO:0006413,GO:0006518,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0007275,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009506,GO:0009507,GO:0009536,GO:0009892,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0012505,GO:0015031,GO:0015833,GO:0015935,GO:0016020,GO:0016070,GO:0016071,GO:0016072,GO:0019222,GO:0019439,GO:0019538,GO:0022613,GO:0022626,GO:0022627,GO:0030054,GO:0030312,GO:0030490,GO:0030684,GO:0030686,GO:0030867,GO:0031090,GO:0031099,GO:0031100,GO:0031974,GO:0031981,GO:0031984,GO:0032501,GO:0032502,GO:0032991,GO:0033036,GO:0033365,GO:0034097,GO:0034470,GO:0034613,GO:0034641,GO:0034645,GO:0034655,GO:0034660,GO:0042175,GO:0042221,GO:0042254,GO:0042274,GO:0042788,GO:0042886,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044432,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045047,GO:0045184,GO:0046483,GO:0046700,GO:0046907,GO:0048513,GO:0048519,GO:0048731,GO:0048732,GO:0048856,GO:0050789,GO:0050896,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051716,GO:0055044,GO:0060255,GO:0061008,GO:0065007,GO:0070013,GO:0070727,GO:0070887,GO:0070972,GO:0071310,GO:0071345,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:0090304,GO:0097159,GO:0097421,GO:0098552,GO:0098554,GO:0098556,GO:0098562,GO:0098588,GO:0098827,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1990823,GO:1990830,GO:1990904
EggNOG free text desc.structural constituent of ribosome
EggNOG OGsCOG0088@1,KOG1753@2759
Ec32 ortholog descriptionRibosomal protein S5 domain 2-type fold, subgroup
Ec32 orthologEc-15_004150.1
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko03011
Exons3
Model size1504
Cds size441
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig422.10809.1prot_H-paniculata_contig422.10809.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig422 3177..7073 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930284.01711-UTR-H-paniculata_contig422:2323..31761622930284.01711-UTR-H-paniculata_contig422:2323..3176Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig422 2324..3176 -
1691481224.7831914-UTR-H-paniculata_contig422:2323..31761691481224.7831914-UTR-H-paniculata_contig422:2323..3176Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig422 2324..3176 -
1622930284.0981328-UTR-H-paniculata_contig422:7073..72831622930284.0981328-UTR-H-paniculata_contig422:7073..7283Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig422 7074..7283 -
1691481224.832107-UTR-H-paniculata_contig422:7073..72831691481224.832107-UTR-H-paniculata_contig422:7073..7283Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig422 7074..7283 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930284.0310853-CDS-H-paniculata_contig422:3176..33771622930284.0310853-CDS-H-paniculata_contig422:3176..3377Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig422 3177..3377 -
1691481224.7993026-CDS-H-paniculata_contig422:3176..33771691481224.7993026-CDS-H-paniculata_contig422:3176..3377Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig422 3177..3377 -
1622930284.0591497-CDS-H-paniculata_contig422:3705..38971622930284.0591497-CDS-H-paniculata_contig422:3705..3897Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig422 3706..3897 -
1691481224.8113167-CDS-H-paniculata_contig422:3705..38971691481224.8113167-CDS-H-paniculata_contig422:3705..3897Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig422 3706..3897 -
1622930284.0814028-CDS-H-paniculata_contig422:7025..70731622930284.0814028-CDS-H-paniculata_contig422:7025..7073Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig422 7026..7073 -
1691481224.822453-CDS-H-paniculata_contig422:7025..70731691481224.822453-CDS-H-paniculata_contig422:7025..7073Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig422 7026..7073 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig422.10809.1

>prot_H-paniculata_contig422.10809.1 ID=prot_H-paniculata_contig422.10809.1|Name=mRNA_H-paniculata_contig422.10809.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=147bp
MGNEAVLESVQVFGRKKTATAVAYCKRGRGLIKVNGCPIELLEPAILRVK
TFEPVLLLGPARFSNVDIRVRVRGGGYTSQIYAIRQAIAKAIVAFYQKYV
DEASKREIKELLMAYDRNLLVADPRRCEPKKFGGPSARARYQKSYR*
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mRNA from alignment at H-paniculata_contig422:2324..7283-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig422.10809.1 ID=mRNA_H-paniculata_contig422.10809.1|Name=mRNA_H-paniculata_contig422.10809.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4960bp|location=Sequence derived from alignment at H-paniculata_contig422:2324..7283- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TCCAACCTGACCACCTTTTCTTGCGTCAGTCTCACAAATCTCCATATATT
ATACGTACGTCTATTTACAGGCCATCCAGGAGTTCCAGTATTAGCGGGTA
CCCATATAAAAAATATGAGGGAGTAGGAAGTTCGTGCGCTGAGCTGAGCC
TCTAGCCCTGATGACCAGTCGCCGCCCTTTCTCCGTCGAGGACACAACCC
ACTTTCAGCCATGGGTAACGAGGCCGTACTGGAGAGCGTTCAGGTGTTCG
GTCGTAAGGTCAGTTAGCTCATCATGTTAGTTGTGATCGCAATGGCGGCC
CCCTTTTTTGCAAGAGAAAAGGGGTGAGATGTGATGCTGGGATTGCTGGC
CCTGTCTAGTCTGTTCCCTGTGTGTCTTGTGGCCGCGTGGACAGCAATGG
GCTTATCAAGCGTGTTGTAAGACCGCTGCGCACTGAAAAAACACGGGAAG
TTATAATGTAAAAGACATGGGTGTTGCATTTCACACTCGGCGGCCCCCTC
TTGTTCATGACAAGAGGGGTGAGATGCTCAAGCAAGCCATGGTAGGGACA
ACGTGTCCTTTGCGACTGCTGGTGCTTTGTGGGCCATTCCTTGGGTAAGG
ACTGCCAAGTGTAGCCTATTTTAAACATCGTACCACGGAACAGTCTGTAT
GGCTAGAGGATCACAATGCTCATTGCAGGTTGCCTAACCGTTACCGGCAT
GTGGTAAACCGTTAGGCTTTTGGGATTGTTTTGTACTCAAAGGTGCATCA
TACCACCTTGTGTTGTATTATCTTCTCAATGTTCGGTATTACCGTCAAAT
TGAATCGTTACTGGACAATAGGGTTCGACACTGTCTCTTTCATGCGGTGG
TCTTTTCCTGATGAACTGTCGCGATAGTCTGTCCGAGTTGTCCTGGGATA
CATCAAACTGACTGCGGGGAGCATCATGTCAAGCTCCCAGAGAGGCTGAT
GAGTAGATATTTGACACCACATACCATTCCACCGGAATTAAAATAATGTC
GGATTACCTTTTGGCACTGAGTGCCTCACTGCAAGTAGATAAACCACCTC
TTCACTGTTGATATTAATATTCCCCGAGAGCCATGATGACTTGACATCCG
ATGCTAACTACGTCGTTGACGGAACTAATATAATGTCGACCACCTTGTGG
TTCTGAGAGCTCTCACCTGAAAGAAGTATAAAGGAATGGATATATGTTTC
GATCTGGTCAGTAGAGAAAATAATTTAATTCCTGGCGTGAGGCCAATGTA
GGCTGCGCCCACTGATTTTCCACTCAGCAGGATTCACTATGGAGACAGTG
GAGTAGAGAGAAATGGTGTTCCGAGATAACGGAATTTATGTCTTGGATTG
TCGCCACGGATTATTCATCGCCTTGGATTGGCGCGAGTACAACTCGATAC
CCAGGTCTTCTCCCTGCTGTCTTCTAAAACGGTGGAGTGATACAAAGTAG
TCTGGTGAGGCCAATGATGTCACTTTTTAGACGCTAACTACGTTGTTACC
CGAAAATACGATGTGGTCTATCTCTGTGGTTCTGACGGCCTCTCCCTCTC
TCCTTGCTTGGGCTTTCACGCTATCCGTTTTTCGTTGGTGGCGGTGAACG
TACAGTAGACACAATTGAATGCAGTCAGGATACTGGGTTTTTGGAATGTA
CTAGATGCCTTACTTATCCGTTTTAGTCCCAGCTGTGGTTTGAAAAGCAG
TGGCTGTGTCTTGGTCGTGTTGACGTCGAGATACTAAGGTAAGGGACGTG
ATGAACTCAAGTGAAACTGTGGACATTCAATCATTCTCGCCGCTTTACCA
TTCCTCGACTAAAATGTAATTTCCTCAGCTAAAGAAGCTAGACACCTGTA
ATATCTTCCGCCTGTAATTTCGGCCTGATCACTGGTGTCGACTGAAGAAT
TGAGCGCGAATGGATTAAGGAAAGCCGATGATGTCAGTTTCAAGACGCTA
ACTACGTCGTTACCTGAAAATATATGAGGTTCATCTCTGTGGTTCTGACG
GCTATTTGTCCAATAGTTCTCCCGAACTTACTCTAATATTATCTAACTAC
AATATTTTGGACAATTTGTTTCCCTGTAATTTGTTCTTCAATTGCTACTC
GATTTTTAGGGTGTACCATGTTTATTCTTGCACTTGAACTACCGTGGTTA
TATTTGTAAAGTGGTGGTAGCATCTTGGCCGAAATAGTGGCGAGATATCA
ACATACATGAGATGCAAGACTGGTGTGAAATTGGCTGTTGCCCAACTACT
ATCCTTCCTCAAATGAGGAAGCCCGACATGGGTACTGTCTTTGATTTTAC
TTGAGCACTTATTTTGTTGAGTAAAGAATTGAGTGTGATTTTGACGATTG
TGAATGGAAACAGAAGAGCTGAGGATGTCAGTTTCGAGACGCTAACTACG
TCGTTACCTGAATACTACATGTGGTCTATCTGTGGTTCTGACGGCTTTTT
TAGATTATAAACACAAATTAATCATTCAGGGTTGTTTGAGTATGACTTGA
CTGCAACCCGTCGTCCGATGACTTAAGATCACGTGTAACCGTGATCGTCC
TGGAGTTGCTCGAATTTGCATTGACTGCAATTTTGAAAGCCTTATTCTCC
CGTATATTTTCACCTTGATCGTTATCCTCGATTTCAGGGTGTACTGTTTT
TTTATTGCAGTGTTGCAACCCCAGTTATTGTAGTTGTACAGTGGTAATAT
TTTAGCCCAATTATTGTCGAGGTATCGACATAATTAGAGGTGAAATACTA
GAGCGTAACTTTCGATATTGACTGATCTACGATTATCGTACTGTTGCTCG
ACGAATGTTCTTACAACTGAAAACGGGCACATCTGTAATGTCTTCGGTAA
GTAATTTCACCTCATCACTTGAGATGAGTTGAAGGTTGAGTTTGTTATTT
TGACAGTGAATTTAAAACAGAAGAGCCAATGATGTGAGTTTGAGACGCTA
ACTACGTCGTTACCTGAACTCTACATGTGGTCCATCCCTGTGGTTCTGAC
GGCTTTTTTGTTTATACACACAATTCAATCGTCCCAAGGTTGTTCGAGCA
TGACTTGACTGCAACCCCTATTTACAAACATCTAGCAGTGACCTCGACCA
TCTCGAAGCGATCGTGAGAACATGGGTCGGACAATTTCATGACCAGAGGT
ATTCGTAATCCAGTGGATGGGTAACATGATTTTGCACGTGATCTGACATC
GGACCGTTGAAGCTCGTCACCCACTGATCGCTTTCACTCAGGGCGCGTCG
CGGTAACATTTCATGTGCATCGTCTATTGTAGTGTATAACAGCCAGAGTT
ATGTGTGTCAAAATAGCCTTCATGATCTGTGACCCTGACGATATGTTCTC
TTATTTTTCGTCCCTTATTGTGTAAACTTCGAGTAGAAGACTGCAACCGC
CGTGGCTTACTGCAAGCGTGGCCGCGGATTGATCAAGGTGAACGGATGCC
CCATCGAGCTTCTTGAGCCCGCGATCCTTCGCGTGAAGACGTTCGAGCCC
GTGCTTCTGCTTGGTCCTGCCCGTTTTTCCAATGTCGACATCCGCGTACG
TGTCAGGGGTGGTGGTTACACGTCTCAGGTGCGTGGACGATCATGGCTCA
AGTTTTTGTAGGGTCTGAGTAGTAATAAGTCCAGGTGATTTTCCTCGTTC
TACCGAGTCTTATTGTAGTTGATGTGGTATCGCTGGCTATTTTTGCCTTT
CGTGCCAAGTTTCAGGCAAAATCAAAGGTGAAACTTGAAAATGTCTGTTG
GTTTAGGCGGATCAGCCAACAGAGGCCCGACATTCGCAAGTGGTGGTACT
TTCACGTCGACGAGTGTTGGAGGTTGTGCAATTCGATGTGCATGTGATCT
AATTGTTTTTCGCCCCTCAACTCCCTCGCCTTTTGTCTCACCTGAATTCT
CTGTAGATTTACGCAATCCGTCAGGCAATTGCCAAGGCGATCGTTGCCTT
CTACCAGAAGTACGTGGACGAAGCCTCCAAGCGTGAGATTAAGGAGCTTC
TTATGGCCTACGACCGCAACCTGCTCGTTGCCGACCCCCGCCGATGTGAA
CCGAAGAAATTCGGTGGTCCTTCGGCGCGTGCGCGCTACCAAAAGTCTTA
CCGTTGATTTTTTTTGTCGGTATAACCTCGAGGCGGAAGGCTGGGGGGAT
TTCAACGATATTCTTTTCATGGCTGGCGTAAGAGTTTTGTGACGGTGATA
CCCTCGCTTTTGAACTGCTGGTGAAGGTTATACGGAAGAAATAATCGACA
AAACGGGTCAGGCGACTTTTAAAATTTCCGACATCGCACTTTGAAACGTA
CGGCTTCTATAGAAACGCGAAGTGGGTGCCCATGCATCTCCACATGACCT
AGTGGTTCGCACTCGTCTAACGTGAGAATGATGAATGTTTTCGAATCACA
TCGGACGGTCGTTCTTACAGTGTTAGAACTGAACACCTTTTCTAGGTTGA
TGGAAGGTGTTGGGCGAGGTCGAAATTCAACACTGTGTGTGTACAGTTCT
TGGGATCATCTCCCATCCCTTCGCAAGATGATCATTTTGCACAACCAAGA
AGAAACAGATGTCCACTTGCGACGTAATACTACCCAAGAAAATTGATGAC
GGTTTGAATATGATATATGACGTTACAAACACCCAAGTACTCGTGAGTGA
ATCCCTTTGGATCTAAACTGTAGGAATGAATATCACGGAAAGAAAGAAAA
GGCGGGAGGGGAACAAATATACAAAACCCACCCCTCCATGACGATTGAGT
GAAAATTTCCATATATTGCGATGAAATCGCATATTTTGTATGCTCTCAAT
AGGTGGTGTAATATTTGATATGAACAAGACATTAAGGCAGAAGGGAGCAA
TTGAAGAAAATGGACAATATTTTCCCGTGAAGGTGGAATTTTTTACTGAG
CTTCAAAGTAGCAGAAGGAAATTGCAACGAAATAAATTGTTCAACGGATA
TATATTTTTT
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Coding sequence (CDS) from alignment at H-paniculata_contig422:2324..7283-

>mRNA_H-paniculata_contig422.10809.1 ID=mRNA_H-paniculata_contig422.10809.1|Name=mRNA_H-paniculata_contig422.10809.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=882bp|location=Sequence derived from alignment at H-paniculata_contig422:2324..7283- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGTAACGAGGCCGTACTGGAGAGCGTTCAGGTGTTCGGTCGTAAGAT
GGGTAACGAGGCCGTACTGGAGAGCGTTCAGGTGTTCGGTCGTAAGAAGA
CTGCAACCGCCGTGGCTTACTGCAAGCGTGGCCGCGGATTGATCAAGGTG
AACGGATGCCCCATCGAGCTTCTTGAGCCCGCGATCCTTCGCGTGAAGAC
GTTCGAGCCCGTGCTTCTGCTTGGTCCTGCCCGTTTTTCCAATGTCGACA
TCCGCGTACGTGTCAGGGGTGGTGGTTACACGTCTCAGAAGACTGCAACC
GCCGTGGCTTACTGCAAGCGTGGCCGCGGATTGATCAAGGTGAACGGATG
CCCCATCGAGCTTCTTGAGCCCGCGATCCTTCGCGTGAAGACGTTCGAGC
CCGTGCTTCTGCTTGGTCCTGCCCGTTTTTCCAATGTCGACATCCGCGTA
CGTGTCAGGGGTGGTGGTTACACGTCTCAGATTTACGCAATCCGTCAGGC
AATTGCCAAGGCGATCGTTGCCTTCTACCAGAAGTACGTGGACGAAGCCT
CCAAGCGTGAGATTAAGGAGCTTCTTATGGCCTACGACCGCAACCTGCTC
GTTGCCGACCCCCGCCGATGTGAACCGAAGAAATTCGGTGGTCCTTCGGC
GCGTGCGCGCTACCAAAAGTCTTACCGTTGAATTTACGCAATCCGTCAGG
CAATTGCCAAGGCGATCGTTGCCTTCTACCAGAAGTACGTGGACGAAGCC
TCCAAGCGTGAGATTAAGGAGCTTCTTATGGCCTACGACCGCAACCTGCT
CGTTGCCGACCCCCGCCGATGTGAACCGAAGAAATTCGGTGGTCCTTCGG
CGCGTGCGCGCTACCAAAAGTCTTACCGTTGA
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