mRNA_H-paniculata_contig42174.10805.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig42174.10805.1 vs. uniprot
Match: A0A1W7R6D6_AEDAL (Putative polyprotein (Fragment) n=2 Tax=Aedes albopictus TaxID=7160 RepID=A0A1W7R6D6_AEDAL) HSP 1 Score: 207 bits (527), Expect = 6.900e-56 Identity = 161/499 (32.26%), Postives = 240/499 (48.10%), Query Frame = 1
Query: 1 IRCWNCGKHGHGQWECRE----KREGKRLGGKRHGTSEHAGYAKDHNVGLHPVRQRHFMPRWLLDPSSKSHVHWIIDSGCTGHHLTPQRDLFQNFPQVIRSSIATAGEGELDVEGQGD--VEGLIWTAEGAIRILFCNVFYVPEASDSTLSVERMVSPGMKAYFGSEQRRLYYNGITIPFEHTSRKEYSLRMIVGDEVEVQAAKRAIGKQVNVLRLFSSDCTTPKNNEKRQQVVDTKLLHERLGHVRDLPTVVRQ-------QGIRL--SGKLGVCSACEKGKASKQPVKKYREERTTEPLELVHTDIAGPVDKSFRG-CRFAITFVDDYSRMRVVSTLRQKSEALWGLK--------QFERDP---------------VRQFCAENSIKQEFSAAYTPQQNDVAERSWRSTFEMARASMITANMGRRYWAEAVRSAVYCLNRAPTRPHNRGTPYEKWHGETPKLDHLRVFGCTAYVMFQSQQRRKPDDKAWAGVLLGY 1380
+ C+ CGK GH +W C++ K + GK+ + K V R FM R ++ +SH W+IDSG T H + R +F F + RSS+ A E+ VEG GD +E + + E I++ V YVP + +S+ ++ S ++A F +L Y + Y LRM G++V +KR S +C H RLGH RD P V+ + +GI + G C C +GK S+ K E+ + L+++HTD+ GP+D +G CR+ +T +DD+SR V L++KS+ ++ QF R P +R+F + IK E++AAY+PQQN V+ER RS EM R ++ A M R+WAEA+ +A Y NR P+ +R TPYE W+ P L+HL+ FGCT YV+ S +R+K D KA L+GY
Sbjct: 201 VVCYFCGKAGHKKWNCKDFLMQKSSSENTSGKKKNLPK--AEQKVRQVRETDFRSFTFMVRGNVNNRPRSHS-WLIDSGATSH-MCSDRSVFSRF-ENSRSSVTVADGNEIRVEGTGDCLIECVNDSGE-LIKLTLQGVLYVPTLESNMISISKLTSKNVRAEFDKTGCKLVYANTVVAIGDKIGDMYWLRMF-GEKVLKVESKR-----------HSKNCQHS--------------WHRRLGH-RD-PAVLEELKRNSLVKGINVVDCGIRTTCECCIEGKMSRPSFPKAAEKTSKNILDIIHTDVCGPMDVVTQGGCRYYMTMIDDHSRYTHVFFLKEKSDVEQRIREFVRMVETQFGRKPQIIRSDQGGEYSGKALRRFYLDEGIKAEYTAAYSPQQNGVSERKNRSLSEMGRCLLLDAKMDNRFWAEAINTACYLQNRLPSAAVDR-TPYEIWYNRKPDLNHLKRFGCTGYVLIPSVKRKKLDVKAVKMTLVGY 664
BLAST of mRNA_H-paniculata_contig42174.10805.1 vs. uniprot
Match: A0A251SKN6_HELAN (Putative zinc finger, CCHC-type n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251SKN6_HELAN) HSP 1 Score: 202 bits (514), Expect = 5.820e-53 Identity = 153/487 (31.42%), Postives = 239/487 (49.08%), Query Frame = 1
Query: 1 IRCWNCGKHGHGQWECREKREGKRLGGKRHGTSEHAGYAKDHNVGLHPVRQRHFMPRWLLDPSSKSHVHWIIDSGCTGHHLTPQRDLFQNFPQVIRSSIATAGEGELDVEGQGDVEGLIWTAEGAIRILFCNVFYVPEASDSTLSVERMVSPGMKAYFGSEQRRLY--YNGITIPFEHTSRKEYSLRMIVGDEVEVQAAKRAIGKQVNVLRLFSSDCTTPKNNEKRQQV-VDTKLLHERLGHVRDLPTVVRQQGIRLSGKLGVCSACEKGKASKQPVKKYREERTTEPLELVHTDIAGPV-DKSFRGCRFAITFVDDYSRMRVVSTLRQKSEALWGLKQFER---------------DPVRQFCAE--------NSIKQEFSAAYTPQQNDVAERSWRSTFEMARASMITANMGRRYWAEAVRSAVYCLNRAPTRPHNRGTPYEKWHGETPKLDHLRVFGCTAYVMFQSQQRRKPDDKAWAGVLLGY 1380
IRC+NC + GH C+ K E ++ ++A KD ++ H FM + ++ + K W +DSGC+ +H+T RDLF N + ++ + T + LDV G G+V I +G R + NVFYV + LSV ++++ G F ++ + N + TS K + L + +N+ ++ TT +++ V VDT + E G V LP +++++ + C C GK +K+ + + ++PL+LVH+DI GP+ +S GCR+ ITF+DDY+R V L+ KSEAL K+F+ D ++C+ N I+ + + +Y+PQQN VAER R+ E++R+ M + YWAEAV A Y LNR T+ TPYE W+G P ++HL+VFGC AYV Q+R K D K V +GY
Sbjct: 997 IRCYNCQRLGHTAKFCKRKDESEKP--------DNALIHKDDDIVEHEDTM--FMI-FNVEEAVKEDC-WYLDSGCS-NHMTGNRDLFINLDESLKKEVRTGDDKRLDVIGSGEVSVSI---KGRTRKI-PNVFYVKGLKHNLLSVGQLINKGYAILFQKDRCIIKDAENEVIGKIRMTSNKMFPLHL---------------DSDINLAMTMTTKDTTILWHKRYGHVNVDTLISMENKGLVFGLPKIMKRESL--------CEGCISGKQTKKTFPRKAIWQASKPLQLVHSDICGPMRTESIGGCRYFITFIDDYTRKSWVYFLKYKSEALSYFKRFKALNEKQSDHLIKTLRSDRGGEYCSNEFQEYLKVNGIRHQLTNSYSPQQNGVAERKNRTLMELSRSMMNAKELPTCYWAEAVACATYILNRTVTKTRPNITPYEAWNGNKPNVEHLKVFGCLAYVHIPKQRRDKLDKKTEKTVFVGY 1443
BLAST of mRNA_H-paniculata_contig42174.10805.1 vs. uniprot
Match: A0A3S3NIE3_9ACAR (Uncharacterized protein (Fragment) n=1 Tax=Dinothrombium tinctorium TaxID=1965070 RepID=A0A3S3NIE3_9ACAR) HSP 1 Score: 199 bits (506), Expect = 3.620e-52 Identity = 152/489 (31.08%), Postives = 224/489 (45.81%), Query Frame = 1
Query: 4 RCWNCGKHGHGQWECREKREGKRLGGKRHGTSEHAGYAKDHNVGLHPVRQRHFMPRWLLDPSSKSHVHWIIDSGCTGHHLTPQRDLFQNFPQVIRSSIATAGEGELDVEGQGDVEGLIWTAEGAIRILFCNVFYVPEASDSTLSVERMVSPGMKAYFGSEQRRLYYNGITIPFEHTSRKEYSLRMIVGDEVEVQAAKRAIGKQVNVLRLFSSDCTTPKNNEKRQQVVDTKLLHERLGHVRDLPTVVRQQG------IRLSGKLGVCSACEKGKASKQPVKKYREERTTEPLELVHTDIAGPVD-KSFRGCRFAITFVDDYSRMRVVSTLRQKSEALW---------------GLKQFERDP--------VRQFCAENSIKQEFSAAYTPQQNDVAERSWRSTFEMARASMITANMGRRYWAEAVRSAVYCLNRAPTRPHNRGTPYEKWHGETPKLDHLRVFGCTAYVMFQSQQRRKPDDKAWAGVLLGY 1380
+C+NCGK GH + +CR KR ++ A KD+N + Q + S+ + +W IDSGCT H++ R+ + F + I A + + G+G V+ T E +V YVP+ S SV + S G K F +E L + G +V ++A K+ L LF S+ N E ++ + +L H RLGHV + ++Q I K +C +C KGK +++P K + T E LELVH+D+ GP+ + G R+ +TF+D YSR L KSEA +K F D ++ +N I +++A YTPQQN VAER R+ EMAR+ + A M + +W EA+ +A Y N P + N TPYE W + P L H+RVFGC A+V ++RRK D KA + LGY
Sbjct: 13 KCFNCGKVGHLKKDCRHL--------KREQSANKANIRKDNNESQGALEQE-----FCFITSTAENGYWCIDSGCT-RHMSSFRECIEEFENIEPIDIYLADDTVVTATGKGIVK---LTLENGCIGKLTDVLYVPDLGQSLFSVSKATSLGWKVAFENESCSLSFKG---------------------KVLLKA------KKSGNLYLFRSNYKETANKESGKETI--QLWHHRLGHVSN--EKIKQLANNDLLSINTCEKDVLCESCVKGKTTRKPFPKKSDSMTKEVLELVHSDVCGPMQTNTVSGRRYFVTFIDYYSRYTETYLLFNKSEAFEMFIEYKNKVEKSTGKQIKVFRSDNGTEYTCKRFEEYFVKNGIVHQYTAPYTPQQNGVAERKNRTLVEMARSMLFCAQMNKNFWGEAIVTATYIQNSCPNKALNGKTPYELWFEKRPSLKHMRVFGCEAFVHVPDEKRRKWDPKAIKCIFLGY 453
BLAST of mRNA_H-paniculata_contig42174.10805.1 vs. uniprot
Match: A0A0N1ICY1_PAPMA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Papilio machaon TaxID=76193 RepID=A0A0N1ICY1_PAPMA) HSP 1 Score: 199 bits (505), Expect = 7.770e-52 Identity = 135/425 (31.76%), Postives = 198/425 (46.59%), Query Frame = 1
Query: 208 WIIDSGCTGHHLTPQRDLFQNFPQVIRSSIATAGEGELDVEGQGDVEGLIWTAEGAIRILFCNVFYVPEASDSTLSVERMVSPGMKAYFGSEQRRLYYNGITIPFEHTSRKEYSLRMIVGDEV-----EVQAAKRAIGKQVNVLRLFSSDCTTPKNNEKRQQVVDTKLLHERLGHVRDLPTVVRQQGIRLSGKLGV-----CSACEKGKASKQPVKKYREERTTEPLELVHTDIAGPVD-KSFRGCRFAITFVDDYSRMRVVSTLRQKSEALWGLKQFERDPVRQ-----------------------FCAENSIKQEFSAAYTPQQNDVAERSWRSTFEMARASMITANMGRRYWAEAVRSAVYCLNRAPTRPHNRGTPYEKWHGETPKLDHLRVFGCTAYVMFQSQQRRKPDDKAWAGVLLGY 1380
W IDSG T H +T + L QN+ + A ++ EG GDVE L+ +++ V YVP S + +SV +M S G++ F S + +Y N I + Y L V E+Q + VN+ + S +L H RLGH+ + +QG+ V C AC KGK S+ P K R TE L L+H+D+ GP+ SF G ++ +TF+DDY+RM +R KSE L K F++ Q F E+ IK + + Y+PQQN VAER+ R+ E R + A + RR+WAEA+ +A+Y N++P++ TP EKW G L +LR FGC AY M +++R+K D K + +GY
Sbjct: 280 WYIDSGATCH-MTNNKSLLQNYSVHTPKLVTVANNNKMYSEGHGDVEILLKGHTQPTKLI--EVIYVPGLSTNLISVGKMASKGLEVQFDSNKCNIYCNKIPVASASRINGVYQLDTATQHSVSIVQPEIQCKSNQHAETVNLCEIKPSQ----------------ELWHRRLGHLNRRSMELLRQGMASGINYTVSDYTPCVACLKGKQSRLPFPKQSYTRATEKLGLIHSDLCGPMSVNSFSGAKYLLTFIDDYTRMTFGYFIRNKSEVLPVFKIFKKFVENQTNLKIKMLRTDNGREYVNKDFQLFLQEHGIKHQTTVPYSPQQNGVAERANRTIIEAGRCMLQEAGLDRRFWAEALNTAIYIKNKSPSKAVRGTTPEEKWSGNKVNLSNLRTFGCVAYAMIPNEKRKKLDAKCKQYIFVGY 685
BLAST of mRNA_H-paniculata_contig42174.10805.1 vs. uniprot
Match: A0A251TN47_HELAN (Putative zinc finger, CCHC-type n=2 Tax=Helianthus annuus TaxID=4232 RepID=A0A251TN47_HELAN) HSP 1 Score: 197 bits (502), Expect = 1.960e-51 Identity = 158/489 (32.31%), Postives = 230/489 (47.03%), Query Frame = 1
Query: 1 IRCWNCGKHGHGQWECREKREGKRLGGKRHGTSEHAGYAKDHNVGLHPVRQRHFMPRWLLDPSSKSHVHWIIDSGCTGHHLTPQRDLFQNFPQVIRSSIATAGEGELDVEGQGDVEGLIWTAEGAIRILFCNVFYVPEASDSTLSVERMVSPGMKAYFGSEQRRLYYNGITIPFEHTSRKEYSLRMIVGDEVEVQAAKRAIGKQVNVLRLFSSDCTTPKNN---EKRQQVVDTKLLHE--RLGHVRDLPTVVRQQGIRLSGKLGVCSACEKGKASKQPVKKYREERTTEPLELVHTDIAGPVDK-SFRGCRFAITFVDDYSRMRVVSTLRQKSEALWGLKQFER---------------DPVRQFCAE--------NSIKQEFSAAYTPQQNDVAERSWRSTFEMARASMITANMGRRYWAEAVRSAVYCLNRAPTRPHNRGTPYEKWHGETPKLDHLRVFGCTAYVMFQSQQRRKPDDKAWAGVLLGY 1380
IRC+NC + GH C ++ EG+R + H A+D FM + + K+ W +DSGC+ +H+T +DLF N R + T + LDV G GDV I E I NVFYV + LSV ++V G F + G I + + R ++M + I + N+ TT N+ +R ++ + LH+ + G V LP + + + VC C GK +++P K + R +EPL+LVH+DI GP++ S GC++ ITF+DD+SR V L+ KS+AL K F++ D ++C N I + + +YTPQQN VAER R+ E++R+ + + YWAEAV A Y LNRA T+ + TP E W G+ P +DHLRVFGC AYV Q R K DDK + +GY
Sbjct: 250 IRCYNCQRLGHTARFCNKREEGERS----NNVLMHKDDAEDE------TEDTMFMI-FNTEEVVKNDC-WYLDSGCS-NHMTGNKDLFVNLNNSERREVRTGDDKRLDVLGCGDVNVKIKGHEKRIP----NVFYVAGLKHNLLSVGQLVQKGYDVCFNDK-------GCVI-HDSSGRCIGVVKMTGNKMYPLNLNHDVIPRVCNM--------TTQDNSTLWHRRYGHLNLETLHDMGKNGTVNGLPKINKSEH--------VCEGCVFGKHARKPFSKKAKWRASEPLQLVHSDICGPMNTPSIGGCKYFITFIDDFSRKTWVYFLKLKSDALHYFKIFKQLVENQIERKIKGIRTDRGGEYCGHEFQNFLKNNGIHHQLTTSYTPQQNGVAERKNRTLMELSRSMLKMKELPNTYWAEAVACATYLLNRATTKSVPKLTPQEAWSGKKPNVDHLRVFGCIAYVHIPKQHRSKLDDKTERAIFVGY 697
BLAST of mRNA_H-paniculata_contig42174.10805.1 vs. uniprot
Match: A0A182G9Z6_AEDAL (Uncharacterized protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182G9Z6_AEDAL) HSP 1 Score: 196 bits (499), Expect = 4.310e-51 Identity = 155/491 (31.57%), Postives = 230/491 (46.84%), Query Frame = 1
Query: 7 CWNCGKHGHGQWECR-----EKREGKRLGGKRHGTSEHAGYAKDHNV--GLHPVRQRHFMPRWLLDPSSKSHVHWIIDSGCTGHHLTPQRDLFQNFPQVIRSSIATAGEGELDVEGQGDVEGLIWTAEG-AIRILFCNVFYVPEASDSTLSVERMVSPGMKAYFGSEQRRLY-YNGITIPFEHTSRKEYSLRMIVGDEVEVQAAKRAIGKQVNVLRLFSSDCTTPKNNEKRQQVVDTKLLHERLGHVRDLPTVVRQQGIRLSGKLGVCSACEKGKASKQPVKKYREERTTEPLELVHTDIAGPV-DKSFRGCRFAITFVDDYSRMRVVSTLRQKSEALWGLKQ--------FERDP---------------VRQFCAENSIKQEFSAAYTPQQNDVAERSWRSTFEMARASMITANMGRRYWAEAVRSAVYCLNRAPTRPHNRGTPYEKWHGETPKLDHLRVFGCTAYVMFQSQQRRKPDDKAWAGVLLGY 1380
C++C K GH + +CR +K+ G+ G K+ GT K++ + G+ VR++ W +DSGC+ H +T R F+ ++ + A G G+ A+G A +ILF V Y+P+ LSV ++ G+ FG+ + + +G Y LRM +E +V + K L + T + R +V ++ ERLG VV+ +RL VC C +GK + K + R L+LVHTD+ GPV + + GCR+ +T +DD+SR VV LRQKS+A +K+ F R P +++F I+ +F+ AY+PQQN VAER RS EMA ++ A + ++YW EA+ +A Y NR P+R + TPYEKW GE P L HLRVFG AYV +R K D K V +GY
Sbjct: 215 CFHCRKPGHYRRDCRLLQQQQKKSGEASGSKQDGTKAKQIAEKENPMCFGIGGVRRK---------------GRWYVDSGCSSH-MTNDRSFFEKLNDNVKIEVVLANGSTTKSAGIGEGYVKCLGADGKAQQILFTEVLYIPDLDSGLLSVRKLTQKGLAVQFGASKCEIVDIDGKVAAIADLCSNLYVLRM--AEEAKVSSEKE---------HLQNCQHTWHRRFGHRDPMVLERIKAERLGD----GFVVQDCELRL-----VCEHCLQGKLHRDSFPKATQSRAKRVLDLVHTDVCGPVVNVTPGGCRYLMTLIDDHSRYTVVCLLRQKSDAARCIKRYVAHVKNRFGRAPCVIRSDGGGEYANQELKEFYELEGIQAQFTTAYSPQQNGVAERKNRSLQEMATCMLLDAGLPKKYWGEAIMTASYLQNRLPSRSVDT-TPYEKWFGEKPSLKHLRVFGSIAYVHIPDVKRAKLDSKGQKLVFVGY 668
BLAST of mRNA_H-paniculata_contig42174.10805.1 vs. uniprot
Match: A0A251UIF2_HELAN (Integrase catalytic domain-containing protein n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251UIF2_HELAN) HSP 1 Score: 195 bits (495), Expect = 1.660e-50 Identity = 150/486 (30.86%), Postives = 236/486 (48.56%), Query Frame = 1
Query: 1 IRCWNCGKHGHGQWECREKREGKRLGGKRHGTSEHAGYAKDHNVGLHPVRQRHFMPRWLLDPSSKSHVHWIIDSGCTGHHLTPQRDLFQNFPQVIRSSIATAGEGELDVEGQGDVEGLIWTAEGAIRILFCNVFYVPEASDSTLSVERMVSPGMKAYFGSEQRRLY--YNGITIPFEHTSRKEYSLRMIVGDEVEVQAAKRAIGKQVNVLRLFSSDCTTPKNNEKRQQVVDTKLLHERLGHVRDLPTVVRQQGIRLSGKLGVCSACEKGKASKQPVKKYREERTTEPLELVHTDIAGPV-DKSFRGCRFAITFVDDYSRMRVVSTLRQKSEALWGLKQFER---------------DPVRQFCAE--------NSIKQEFSAAYTPQQNDVAERSWRSTFEMARASMITANMGRRYWAEAVRSAVYCLNRAPTRPHNRGTPYEKWHGETPKLDHLRVFGCTAYVMFQSQQRRKPDDKAWAGVLLGY 1380
IRC+ C + GH C+ K E ++ ++A KD ++ H FM + ++ + K W +DSGC+ +H+T RDLF N + ++ + T + L+V G G+V I +G R + NVFYV + LSV ++++ G F ++ + + + TS K + L + + ++ A K ++L + VDT + E G V LP +++Q+ + C C GK +K+ + + ++PL+LVH+DI GP+ +S GCR+ ITF+DDY+R V L+ KSEAL K+F+ D ++C+ N I+ + + +Y+PQQN VAER R+ E++R+ M + YWAEAV A Y LNR T+ TPYE W+G P ++HL+VFGC AYV Q+R K D K V +GY
Sbjct: 245 IRCYACQRLGHTTKFCKRKDESEKP--------DNALIHKDGDIVEHEDTM--FMI-FNVEEAVKEDC-WYLDSGCS-NHMTGNRDLFINLDESLKKEVRTGDDKRLEVIGSGEVSVSI---KGRTRKI-PNVFYVKGLKHNLLSVGQLINKGYTILFQKDRCIIKDAESEVIGEIRMTSNKMFPLHL----DSDINFAMTMTTKDTSILW----------HKRYGHVNVDTLINMENKGLVFGLPKIMKQESL--------CEGCISGKQTKKTFPRKAMWQASKPLQLVHSDICGPMRTESIGGCRYFITFIDDYTRKSWVYFLKYKSEALNYFKRFKALNEKQSDHLIKTLRSDRGGEYCSNAFQEYLKVNCIRHQLTNSYSPQQNGVAERKNRTLMELSRSMMNAKELPNCYWAEAVACATYILNRTVTKTRPNITPYEAWNGNKPNVEHLKVFGCLAYVHIPKQRRDKLDKKTEKTVFVGY 691
BLAST of mRNA_H-paniculata_contig42174.10805.1 vs. uniprot
Match: A0A2Z7BCE9_9LAMI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7BCE9_9LAMI) HSP 1 Score: 191 bits (486), Expect = 2.310e-50 Identity = 141/489 (28.83%), Postives = 228/489 (46.63%), Query Frame = 1
Query: 4 RCWNCGKHGHGQWECREKREGKRLGGKRHGTSEHAGYAKDHNVGLHPVRQRHFMPRWLLDPSSKSHVHWIIDSGCTGHHLTPQRDLFQNFPQVIRSSIATAGEGELDVEGQGDVEGLIWTAEGAIRILFCNVFYVPEASDSTLSVERMVSPGMKAYFGSEQRRLYYNGITIPFEHTSRKEYSLRMIVGDEVEVQAAKRAIGKQVNVLRLFSSDCTTPKNNEKRQQVVDTKLLHERLGHVRD--LPTVVRQQGIRLSGKL----GVCSACEKGKASKQPVKKYREERTTEPLELVHTDIAGPV-DKSFRGCRFAITFVDDYSRMRVVSTLRQKSEALW---------------GLK--------QFERDPVRQFCAENSIKQEFSAAYTPQQNDVAERSWRSTFEMARASMITANMGRRYWAEAVRSAVYCLNRAPTRPHNRGTPYEKWHGETPKLDHLRVFGCTAYVMFQSQQRRKPDDKAWAGVLLGY 1380
+C+ CGK GH +CR S A +A++ + F+ L++ V W IDSGC+ +H+T +++F+ + R I ++ VEG+G VE + + G +++ NV Y PE + + SV +++ G F + + E + +V ++E A T KN ++L H R GH+ L + +++ +R ++ VC C GK SK+ + R TEPLELVH D+ GP+ ++ G ++ + FVDDYSRM V L+ KSEA LK +F Q+C ++ I +E +A YTP+QN VAER R+ EMAR+ + + + +WAEAV +AVY +N +PT+ TPYE W G+ P ++HL++FGC YV+ + +R K ++K+ + +GY
Sbjct: 108 KCYTCGKPGHLAKDCR---------------SSQAEFAEETEA-----TEEDFLFMALMEHGKDEQVVWFIDSGCS-NHMTGMKEMFRELDETQRRVIRLGNNKQIQVEGKGTVE--VQSVFGKSKLI-SNVLYTPELAHNLFSVGQLLLSGFTILFDESHCIITEKATGHVLAKVNMAENHMFPLVFSKLESHAM-----------------VTMTKNA--------SQLWHLRYGHLHTAGLRLLNQKEMVRGLPRIDVDGAVCEGCMYGKQSKRSFPVGQSWRATEPLELVHADLCGPMRTETLGGSKYFLLFVDDYSRMSWVYFLKFKSEAFGQFFKFKALVEKQKGSNLKILRTDRGGEFTSMEFNQYCEKHGIHKELTAPYTPEQNGVAERKNRTIVEMARSMLKSKGLPYNFWAEAVTTAVYLINLSPTKAVMNKTPYEAWSGKRPSVEHLKIFGCIVYVLINANERHKLEEKSIKCIFIGY 547
BLAST of mRNA_H-paniculata_contig42174.10805.1 vs. uniprot
Match: A0A5D3CBW3_CUCME (Integrase n=1 Tax=Cucumis melo var. makuwa TaxID=1194695 RepID=A0A5D3CBW3_CUCME) HSP 1 Score: 194 bits (493), Expect = 2.490e-50 Identity = 149/493 (30.22%), Postives = 227/493 (46.04%), Query Frame = 1
Query: 1 IRCWNCGKHGHGQWECREKREGKRLGGKRHGTSEHAGYAKDHNVGLHPVRQRHFMPRWLLDPSSKSHV---HWIIDSGCTGHHLTPQRDLFQNFPQVIRSSIATAGEGELDVEGQGDVEGLIWTAEGAIRILFCNVFYVPEASDSTLSVERMVSPGMKAYFGSEQRRLYYN-GITIP-FEHTSRKEYSLRMIVGDEVEVQAAKRAIGKQVNVLRLFSSDCTTPKNNEKRQQVVDTKLLHERLGHV--RDLPTVVRQQGIR----LSGKLGVCSACEKGKASKQPVKKYREERTTEPLELVHTDIAGPVDKSFRGC-RFAITFVDDYSRMRVVSTLRQKSEALWGLKQFERDPVRQ---------------------FCAENSIKQEFSAAYTPQQNDVAERSWRSTFEMARASMITANMGRRYWAEAVRSAVYCLNRAPTRPHNRGTPYEKWHGETPKLDHLRVFGCTAYVMFQSQQRRKPDDKAWAGVLLGY 1380
I+C+NCGK+GH Q C + G + + +H +++ L S + +V W +DSGC+ +H+T R +F + +S + T L V+GQGD+ L+ T +G R+ NVFYVP + LS+ +++ G+K F + + G+ I + T+ K + L G + FSS P + L H R GH+ + L + + +R ++ + +C C K + + R ++PLEL+HTD+ GP+ + G R+ ITF+DD+SR + L++KSEAL K F+ Q F E I + +A TPQQN VAER R+ EMAR+ + N+ +W +AV VY LNRAPT+ TPYE W GE P + HLRVFG AY +Q R K DDK+ +++GY
Sbjct: 283 IQCFNCGKYGHFQANCWALKNG----------------VGNTTMNMHKEQKKIDEGILFLACSVQDNVVEPTWYLDSGCS-NHMTGNRSIFVTLDESFQSEVKTGDNTRLQVKGQGDI--LVKTKKGTKRVT--NVFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAIKDQAGVLIAKVKMTANKMFPLNFTYGQ-----------------ISCFSSILKDP-----------SWLWHFRYGHLNFKSLSYLCKNHMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIHTDLCGPMRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGNFFKEQGIHHQMTARMTPQQNGVAERKNRTIMEMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCGEKPSVSHLRVFGSIAYSHIPNQLRGKLDDKSEKCIMVGY 726
BLAST of mRNA_H-paniculata_contig42174.10805.1 vs. uniprot
Match: A0A5A7V047_CUCME (Integrase n=21 Tax=Cucumis melo TaxID=3656 RepID=A0A5A7V047_CUCME) HSP 1 Score: 194 bits (493), Expect = 3.030e-50 Identity = 149/493 (30.22%), Postives = 227/493 (46.04%), Query Frame = 1
Query: 1 IRCWNCGKHGHGQWECREKREGKRLGGKRHGTSEHAGYAKDHNVGLHPVRQRHFMPRWLLDPSSKSHV---HWIIDSGCTGHHLTPQRDLFQNFPQVIRSSIATAGEGELDVEGQGDVEGLIWTAEGAIRILFCNVFYVPEASDSTLSVERMVSPGMKAYFGSEQRRLYYN-GITIP-FEHTSRKEYSLRMIVGDEVEVQAAKRAIGKQVNVLRLFSSDCTTPKNNEKRQQVVDTKLLHERLGHV--RDLPTVVRQQGIR----LSGKLGVCSACEKGKASKQPVKKYREERTTEPLELVHTDIAGPVDKSFRGC-RFAITFVDDYSRMRVVSTLRQKSEALWGLKQFERDPVRQ---------------------FCAENSIKQEFSAAYTPQQNDVAERSWRSTFEMARASMITANMGRRYWAEAVRSAVYCLNRAPTRPHNRGTPYEKWHGETPKLDHLRVFGCTAYVMFQSQQRRKPDDKAWAGVLLGY 1380
I+C+NCGK+GH Q C + G + + +H +++ L S + +V W +DSGC+ +H+T R +F + +S + T L V+GQGD+ L+ T +G R+ NVFYVP + LS+ +++ G+K F + + G+ I + T+ K + L G + FSS P + L H R GH+ + L + + +R ++ + +C C K + + R ++PLEL+HTD+ GP+ + G R+ ITF+DD+SR + L++KSEAL K F+ Q F E I + +A TPQQN VAER R+ EMAR+ + N+ +W +AV VY LNRAPT+ TPYE W GE P + HLRVFG AY +Q R K DDK+ +++GY
Sbjct: 339 IQCFNCGKYGHFQANCWALKNG----------------VGNTTMNMHKEQKKIDEGILFLACSVQDNVVEPTWYLDSGCS-NHMTGNRSIFVTLDESFQSEVKTGDNTRLQVKGQGDI--LVKTKKGTKRVT--NVFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAIKDQAGVLIAKVKMTANKMFPLNFTYGQ-----------------ISCFSSILKDP-----------SWLWHFRYGHLNFKSLSYLCKNHMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIHTDLCGPMRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGNFFKEQGIHHQMTARMTPQQNGVAERKNRTIMEMARSMLKAKNLPNEFWGDAVACTVYILNRAPTKSVPGMTPYEAWCGEKPSVSHLRVFGSIAYSHIPNQLRGKLDDKSEKCIMVGY 782 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig42174.10805.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig42174.10805.1 >prot_H-paniculata_contig42174.10805.1 ID=prot_H-paniculata_contig42174.10805.1|Name=mRNA_H-paniculata_contig42174.10805.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=460bp IRCWNCGKHGHGQWECREKREGKRLGGKRHGTSEHAGYAKDHNVGLHPVRback to top mRNA from alignment at H-paniculata_contig42174:277..1752+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig42174.10805.1 ID=mRNA_H-paniculata_contig42174.10805.1|Name=mRNA_H-paniculata_contig42174.10805.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1476bp|location=Sequence derived from alignment at H-paniculata_contig42174:277..1752+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig42174:277..1752+ >mRNA_H-paniculata_contig42174.10805.1 ID=mRNA_H-paniculata_contig42174.10805.1|Name=mRNA_H-paniculata_contig42174.10805.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2760bp|location=Sequence derived from alignment at H-paniculata_contig42174:277..1752+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |