mRNA_H-paniculata_contig4194.10761.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4194.10761.1 vs. uniprot
Match: D8LN11_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN11_ECTSI) HSP 1 Score: 581 bits (1498), Expect = 8.460e-176 Identity = 481/1330 (36.17%), Postives = 621/1330 (46.69%), Query Frame = 1
Query: 1 LCTVTRFVGQGAFGEVYEVVWTSVGRERGETMAMKTVRLADLDSDTRDEYRVLLVEEILTAVRVKRHPNVVNVRFAHIMGFCSEREEYLCFEDFVTGRDLEELIGEGEGELYDGTVTEVQGRLLSYAIQLARGLGHVHRCGVLHQARMKTCIFYDIKSANVMVSNDGRVLIADFGFSTVGYFGAPPGVARTPSPTAVN--------------------NCAKPSV---------------PNLLNGEIP---------TS--------------------------------------DIPIPGT------------------------PIGENKG--------------------RSIGEGEQQESTDNILYGTLKGYTPRYQSPEICTIMNEKAALVEDPHEDPQVVLYSSV-RGWEWGWTKQGTA------RSTTQSVGTPFTHRSDMWAAGVMILELYAGGLKALKEGRGDNAPELLETLSGNSETEKTDGQSSPIDFETAKSLHLRESDDEGTAKRKRCPIDMPKGVVSVLRELLAREPGARPTSMEVVAIRFSLVLKRALRSGDAVLPYPTTEAPSAESLCEEALVEDEGEENHGKVGRLHMWLGKALFLKGEDRQEQAIEEYREGVRVLEQSKTERRSSSMALFRWYLGTALLDFGKHVEALHHLTQAVSICPANG-----------------------------------------------KYRQALALAQNR------------------------------------------HALLGSAPQ--VRIPRNKTSDRW-----LSGGRIFFLSFTLIKCWYRCA--LARAVSVSRDLRRTRRILSAAN-RRFNIGDEIFFKGICPTGANHKPTDPLHCHLFGKKGEGGRI-----GAFVISSLLSVEEASWKSVGGDAYTARWRESEPSPEGCVQSHRTYNLVHICFEEGVTDVMTTPVAAVVPQETTPTRATDNQTPPLTSGNQLFTAE-GSNH-GTSDEKEGCTRP-----------------TEGSLPVSSFPGNGNLSPTS-MALFVGSPCTRDQDCLQALRAVGRAAMVGFHGGLVGAVRDISWGKSGLITIVDAGPSGCLTLQEMLR-GALYRESGIG---NSGRGVEAGGASDVGGLGVVGVISRMLTLTRQIAAAMAHCHRRGVLLQNVKPEDVLVSSQWEAKLRPTYTHAREGDAWTPVSAHQASRSPKLGKSKRNQHRSCSLHPLLGAGNGPVTALFSDATSPDYQAR--VQEGLFNSPS*KNSPPCGRRCLSLPCLFVEPE-PRDCKNTKRNQATFEGIHATHSTMCISR 3198
LCTV + VGQGAFGEVY+VVWT +G +RG T+AMKTVRLAD+ SD RDEYRVLLVEEIL AVRVK HPNVVNVRFAHIMGFCSE EEY CFEDFVTG+ LEEL+ EGEGELYDGT E DIKSAN+MVSND +LI DFGF+TVG FG PP + S TAV C K S P + +G IP TS P+ GT P+ N G + G+G + + D++L GTLKGYTPRYQSPE+ IM R + G + A T + + F+HRSDMWAAGV++LE+YAGGL L G+G+NA ELLETL N T DG ++ + +D+ R +DMP+GV++VLRE+ R G RP SME +A R S L L AV+P P+ APS+ SLCE+A V E +ENH KVGRLHMWLGKALFLKG+DR+EQA++EYREGVRVL +S+ ERRS SMALFRWYLG ALL+ G+ EAL HL ++VSI P N K R++ Q R A+ G A + + R +S R LS R L+ LI + +A + S + TR + A RRF++GDEI G A+ KP +PLHC F + R+ G FVI LLS +AS + G+AYTA + + + R+Y++VH+ FE G T +P++A TP+ A + T E G NH GT DE++G R T G+ S + ++SPT+ +AL + C R+++ + L+A GRAAMVGFH L GAVR + W L I D P CLTL+E G+LYR +GIG +S RG A D + V+ R+L L +Q+AAA+ HCHR+GVLL+ P++VLV+ +W+A LRP Y+HA E WT VS +A + + ++ + L LL A F++ATS DYQ+ Q N P + S RR +L V+ E PR + R+ + HAT SR
Sbjct: 324 LCTVKQSVGQGAFGEVYQVVWTGIGSDRGSTLAMKTVRLADISSDERDEYRVLLVEEILAAVRVKPHPNVVNVRFAHIMGFCSENEEYFCFEDFVTGKSLEELVAEGEGELYDGTPAE------------------------------------DIKSANIMVSNDAGLLITDFGFATVGQFGPPPQLPAEKS-TAVPAIASTAAGVEPVGEGLEKGCGCGKSSPSGNPQSGVDTGSGNEPEVPSGWIPGYSESGGPHTSASGNRCCGSMERDMSAAEGRQEARTAAGGSAEQAQVQHSCPVVGTGAGPPVITKVSPATAAAEPAGRRSPLAGNGGGPGGAGKEIMDGSGGGSGLLQQNGDGGRPPNRDSVLLGTLKGYTPRYQSPEVSAIMKXXXXXXXXXXXXXXXXXXQEGGRSMKIGAQQHPPASRSEKNHDTVDAWRSQFSHRSDMWAAGVVVLEMYAGGLGNLPAGQGENALELLETLVRN--TVGHDGG--------RRNCASADGEDKTKKGRDTFLVDMPEGVLAVLREVFQRTAGNRPFSMEALAARLSETLGGMLEKKLAVVPCPSAGAPSSSSLCEQAPVYVECDENHAKVGRLHMWLGKALFLKGDDRREQALQEYREGVRVLLESEAERRSPSMALFRWYLGKALLENGEIDEALPHLAESVSIDPENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYQLRMHRIDEKRRKSAEEEQQRVSRSLQESEGAGTPQGAASPKPGDAEESGTPLAATTPSDEPTAAMSGFAQSRLLALERASSSTRTYALENLSDYRNHKLAGKLIGDTWGSGGGVAHPIDYSFGDKNTRDAATLAEVRRFSVGDEIV--GGPDISASGKPLEPLHCCGFSSPYDDTRVDTEVDGRFVICGLLSPGQASLH-IPGEAYTATRSTTNRCRQQPDECSRSYHVVHVRFETGNTTQAASPMSA------TPSVA------------EAITGEIGDNHLGTIDERQGKVRRAGTEATVGPGAGCSSGVTGGNKTGRSLSSSRSISPTNRLALLSSTRCKREEEYVPMLKATGRAAMVGFHAQLAGAVRQLRWEACDLTLIADDLPGACLTLREACTSGSLYRGTGIGTSSSSSRGHHA--TRDDQRVNAPVVVDRILKLAKQMAAAILHCHRKGVLLRTTTPDNVLVTPEWDAILRPNYSHAYEAQRWTTVSV-RAQQQQRQAPTRSGAN----LDKLLAAP-------FTNATSLDYQSPEIAQMRSENEPRQRVSGRAQRRSAALTGTGVQEERPRSMSSPTRSHPSISPEHATTRGRAQSR 1571
BLAST of mRNA_H-paniculata_contig4194.10761.1 vs. uniprot
Match: A0A6H5L4H4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4H4_9PHAE) HSP 1 Score: 311 bits (797), Expect = 2.550e-91 Identity = 155/291 (53.26%), Postives = 203/291 (69.76%), Query Frame = 2
Query: 3389 VTPSTSDNWAWALIVLQMFSDEIWAPGRGQDGLATLEALLKRRSAVETWSTDDVVSWLRDIGLSDSNVESEVRAFKITGSELLVPTCPRDVIEQLGIFLTDVELAAKFWEAVARDLQRWAMPPSLAEILRRCLADNPDDRFSSMEEVCVLLHG--ATPHGTNDDSHVVLSRSTTAPNRDYETSDIHTAMILNNVGACFHIRGQGEEAERHYKMALLARDGLAEAHYNLGLLYTTPAFDKFRDAQQEFETTAGLLDVLDWRRRASLEHARVAERKFNYHQSQEVMQALSGKY 4255
+T SD WAWAL+VLQMFSD+ W PG GQ GL LEALL R+ V+ W+T+DVVSWLRDIGL E E+RAFKI G +LVPTC RD++E+LG+F+TD EL+ K W ++A LQRW+MP SLA++LRRCLAD+P DRFSSMEEVC LL G A G +D+ V + S + + D + + T MILN++G C +G+ EE+ER+YK+ALL+ +G+ EA F+KFR+AQQ F+ + D RR+ S+EH++ AERK NYHQSQE+M+ALSG Y
Sbjct: 2 ITACESDIWAWALMVLQMFSDDAWPPGSGQKGLPALEALLLRKQGVDAWTTEDVVSWLRDIGLWSEKTEREIRAFKIDGPHMLVPTCRRDIVEKLGLFITDGELSCKLWHSIAGGLQRWSMPFSLAQVLRRCLADSPKDRFSSMEEVCRLLRGIAAGDGGRDDEDSAVSAASDYSCDPDVASDRLRTGMILNDIGVCLCSKGETEESERYYKLALLSSEGVFEAXXXXXXXXXXXXFNKFREAQQMFDAATERMSHGDPRRKFSIEHSKAAERKSNYHQSQEIMKALSGSY 292
BLAST of mRNA_H-paniculata_contig4194.10761.1 vs. uniprot
Match: A0A810NWL5_9ACTN (Non-specific serine/threonine protein kinase n=2 Tax=Catellatospora TaxID=53365 RepID=A0A810NWL5_9ACTN) HSP 1 Score: 77.8 bits (190), Expect = 1.540e-10 Identity = 64/189 (33.86%), Postives = 86/189 (45.50%), Query Frame = 1
Query: 10 VTRFVGQGAFGEVYEVVWTSVGRERG--ETMAMKTVRLADLDSDTRDEYRVLLVEEILTAVRVKRHPNVVNVRFAHIMGFCSEREEYLCFEDFVTGRDLEELIGEGEGELYDGTVTEVQGRLLSYAIQLARGLGHVHRCGVLHQARMKTCIFYDIKSANVMVSNDGRVLIADFGFSTVGYFGAPPGVAR 570
VT+ G G VY V R G +A+K+ R L + D+ R V+E + + HPNV + + F ++V G L E I +G LY+G EV RLL A+QLA GL H HR G++HQ D+K ANV++ G + DFG S VG A P AR
Sbjct: 25 VTKVHEHGGMGLVYRV------RHLGWDADLALKSPRPQQLRT-AEDQQR--FVDEAQAWISLGLHPNVCAAHYVRAVDGVPR-----VFAEYVPGGSLREAID--DGRLYEGAPDEVLARLLDVAVQLAWGLAHAHRRGLVHQ---------DVKPANVLLDEAGTAKVTDFGLSRVGARAARPDPAR 188
BLAST of mRNA_H-paniculata_contig4194.10761.1 vs. uniprot
Match: A0A8J3HDW0_9ACTN (Non-specific serine/threonine protein kinase n=1 Tax=Catellatospora sp. TT07R-123 TaxID=2733863 RepID=A0A8J3HDW0_9ACTN) HSP 1 Score: 74.7 bits (182), Expect = 1.340e-9 Identity = 64/192 (33.33%), Postives = 85/192 (44.27%), Query Frame = 1
Query: 1 LCTVTRFVGQGAFGEVYEVVWTSVGRERG--ETMAMKTVRLADLDSDTRDEYRVLLVEEILTAVRVKRHPNVVNVRFAHIMGFCSEREEYLCFEDFVTGRDLEELIGEGEGELYDGTVTEVQGRLLSYAIQLARGLGHVHRCGVLHQARMKTCIFYDIKSANVMVSNDGRVLIADFGFSTVGYFGAPPGVAR 570
L VTR QG G VY V R G +A+K R L + E + L V+E + + HP+V + + F ++V G L E I +G LY G E+ RLL A+QLA GL H HR G++HQ D+K ANV++ G + DFG S VG G AR
Sbjct: 21 LYRVTRVHEQGGMGLVYRV------RHLGWDVDLALKNPRPQQLRTA---EDQQLFVDEAQAWISLGLHPHVCAAHYVRAIDGVPR-----VFAEYVPGGSLREAID--DGRLYGGGPDEMLARLLDLAVQLAWGLAHAHRRGLVHQ---------DVKPANVLLDEAGTAKVTDFGLSRVGVPAQSSGPAR 187
BLAST of mRNA_H-paniculata_contig4194.10761.1 vs. uniprot
Match: UPI001BE47AF6 (serine/threonine protein kinase n=1 Tax=Nonomuraea sp. NEAU-A123 TaxID=2839649 RepID=UPI001BE47AF6) HSP 1 Score: 73.6 bits (179), Expect = 1.630e-9 Identity = 57/173 (32.95%), Postives = 86/173 (49.71%), Query Frame = 1
Query: 22 VGQGAFGEVYEVVWTSVGRERGETMAMKTVRLA-DLDSDTRDEYRVLLVEEILTAVRVKRHPNVVNVRFAHIMGFCSEREEYLCFEDFVTGRDLEELIGEGEGELYDGTVTEVQGRLLSYAIQLARGLGHVHRCGVLHQARMKTCIFYDIKSANVMVSNDGRVLIADFGFSTV 537
+GQG G +VW +V + +A+K VRL DLD +R + E A R++ HP++V V + G ++ E V GR L+ ++ + +G L V + R+L LG H G+LH+ D+K ANVM++NDGRVL+ DFG +TV
Sbjct: 29 LGQGGMG----IVWRAVDELLRQEVAIKEVRLPPDLDEASRSALAERTLREARAAARLRSHPSIVTVHDVVLDG----GRPWIVME-LVHGRSLDRVVRD-DGPLPPQQVAWIGLRMLD-------ALGAAHASGILHR---------DVKPANVMLTNDGRVLLTDFGIATV 175
BLAST of mRNA_H-paniculata_contig4194.10761.1 vs. uniprot
Match: UPI001FE78914 (serine/threonine protein kinase n=1 Tax=Nonomuraea deserti TaxID=1848322 RepID=UPI001FE78914) HSP 1 Score: 73.2 bits (178), Expect = 2.060e-9 Identity = 57/173 (32.95%), Postives = 88/173 (50.87%), Query Frame = 1
Query: 22 VGQGAFGEVYEVVWTSVGRERGETMAMKTVRLA-DLDSDTRDEYRVLLVEEILTAVRVKRHPNVVNVRFAHIMGFCSEREEYLCFEDFVTGRDLEELIGEGEGELYDGTVTEVQGRLLSYAIQLARGLGHVHRCGVLHQARMKTCIFYDIKSANVMVSNDGRVLIADFGFSTV 537
+GQG G VW ++ + +A+K V+L DLD+ +R+E + E A R++ HP++V V + G ++ E V GR L++ + EG G L V + R+L LG H GVLH+ D+K ANVM+++DGRVL+ DFG ++V
Sbjct: 15 LGQGGMG----TVWRAMDALLQQEVAVKEVKLPPDLDAASREELTQRTLREARAAARLRSHPSIVTVHDVVLDG----GRPWIVME-LVQGRSLDQAVREG-GPLPPHKVAWIGMRMLD-------ALGAAHGSGVLHR---------DVKPANVMLTDDGRVLLTDFGIASV 161
BLAST of mRNA_H-paniculata_contig4194.10761.1 vs. uniprot
Match: UPI0007C7B830 (protein kinase n=2 Tax=Streptomyces viridochromogenes TaxID=1938 RepID=UPI0007C7B830) HSP 1 Score: 73.6 bits (179), Expect = 3.070e-9 Identity = 77/264 (29.17%), Postives = 107/264 (40.53%), Query Frame = 1
Query: 1 LCTVTRFVGQGAFGEVYEV---VWTSVGRERGETMAMKTVRLADLDSDTRDEYRVLLVEEILTAVRVKRHPNVVNVRFAHIMGFCSEREEYLCFEDFVTGRDLEELIGEGEGELYDGTVTEVQGRLLSYAIQLARGLGHVHRCGVLHQARMKTCIFYDIKSANVMVSNDGRVLIADFGFSTVGYFGAPPGVARTPSPTAVNNCAKPSVPNLLNGEIPTSDIPIPGTPIGENKGRSIGEGEQQESTDNILYGTLKGYTPRYQSPE 783
L V +GQG G V+ V W + +A+KT L D+ D+ R V E T V + HP+V N + +G F +++ G L + I + LY G+ +V R+L AIQ+A GL H HR GV+HQ D+K ANV++ +G + DFG + G GA +P +P PG P Q ST L T+ G TP Y SPE
Sbjct: 59 LYEVRAVLGQGMMGVVHRVRHLAWDT-------DLAVKTP-LPDVLVSQADKER--FVREAETWVSLGLHPHVCNCYYVRTLGGVPR-----VFTEYLDGGSLRDWID--DRRLYRGSSRKVLARVLDIAIQMAWGLEHSHRHGVVHQ---------DVKPANVILDTEGTARVTDFGLARTGRGGA----------------------------VPWPAVPGPGAPAS------------QAST---LLVTVGGLTPAYASPE 253
BLAST of mRNA_H-paniculata_contig4194.10761.1 vs. uniprot
Match: A0A059LCW1_9CHLO (Protein kinase (Fragment) n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LCW1_9CHLO) HSP 1 Score: 71.6 bits (174), Expect = 3.180e-9 Identity = 53/170 (31.18%), Postives = 82/170 (48.24%), Query Frame = 1
Query: 22 VGQGAFGEVYEVVWTSVGRERGETMAMKTVRLADLDSDTRDEYRVLLVEEILTAVRVKRHPNVVNVRFAHIMGFCSEREEYLCFEDFVTGRDLEELIGEGEGELYDGTVTEVQGRLLSYAIQLARGLGHVHRCGVLHQARMKTCIFYDIKSANVMVSNDGRVLIADFGFS 531
+G+GA+G V E + + GR +A+K+V L + R + +E + +R RHPNVV +G + EE L F + V+G + ++ Y V R Y Q+ RGL ++H GV+H+ DIK AN++V GR+ +ADFG S
Sbjct: 17 IGRGAYGSVCEGLDSDTGR----FLAVKSVLLGRAANTARAREHIKSLEGEVELLRRLRHPNVVQY-----LGTAQQGEELLIFLELVSGGSIASVVSR-----YGALEERVARR---YTRQMTRGLAYLHSQGVIHR---------DIKGANILVDERGRIKLADFGAS 160
BLAST of mRNA_H-paniculata_contig4194.10761.1 vs. uniprot
Match: A0A239D9T7_9ACTN (Non-specific serine/threonine protein kinase n=2 Tax=Actinomadura mexicana TaxID=134959 RepID=A0A239D9T7_9ACTN) HSP 1 Score: 72.4 bits (176), Expect = 3.350e-9 Identity = 52/173 (30.06%), Postives = 84/173 (48.55%), Query Frame = 1
Query: 22 VGQGAFGEVYEVVWTSVGRERGETMAMKTVRL-ADLDSDTRDEYRVLLVEEILTAVRVKRHPNVVNVRFAHIMGFCSEREEYLCFEDFVTGRDLEELIGEGEGELYDGTVTEVQGRLLSYAIQLARGLGHVHRCGVLHQARMKTCIFYDIKSANVMVSNDGRVLIADFGFSTV 537
+G+G G +VW + R +AMK +R+ DL + RD + + E A R++ HP+++NV + E +V GR LE+++ + DG + R + L L HR G+LH+ D+K ANV++++DGRVL+ADFG + V
Sbjct: 12 IGRGGMG----IVWKAYDRALERQVAMKRLRVPGDLAEEDRDALKGRFLREARAAARLE-HPSIINV-----YDVIDDAAEPWIVMQYVRGRSLEQIVRD------DGPIPVA--RAAQIGLALLDALDCAHRAGILHR---------DVKPANVLIADDGRVLLADFGIAAV 157
BLAST of mRNA_H-paniculata_contig4194.10761.1 vs. uniprot
Match: A0A2J6KCR8_LACSA (Protein kinase domain-containing protein n=2 Tax=Lactuca TaxID=4235 RepID=A0A2J6KCR8_LACSA) HSP 1 Score: 71.2 bits (173), Expect = 1.140e-8 Identity = 53/173 (30.64%), Postives = 85/173 (49.13%), Query Frame = 1
Query: 16 RFVGQGAFGEVYEVVWTSVGRERGETMAMKTVRLA-DLDSDTRDEYRVLLVEEILTAVRVKRHPNVVNVRFAHIMGFCSEREEYLCFEDFVTGRDLEELIGEGEGELYDGTVTEVQGRLLSYAIQLARGLGHVHRCGVLHQARMKTCIFYDIKSANVMVSNDGRVLIADFGFS 531
+G GAFG VY + + GE +A+K V + + S + + + +EE + ++ HPN+V +G E E F +FV G + L+G+ G+ E R+ Y QL GL ++H+ G++H+ DIK AN++V N GR+ +ADFG S
Sbjct: 82 ELIGCGAFGRVY----MGMNLDSGELLAVKQVSVVVNTASKDKTQAHIRELEEEVKLLKNLSHPNIVRY-----LGTAREEESLNIFLEFVPGGSISSLLGKF------GSFPESVIRM--YTKQLLLGLEYLHKNGIMHR---------DIKGANILVDNKGRIKLADFGAS 228 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4194.10761.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4194.10761.1 >prot_H-paniculata_contig4194.10761.1 ID=prot_H-paniculata_contig4194.10761.1|Name=mRNA_H-paniculata_contig4194.10761.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=986bp MAMKTVRLADLDSDTRDEYRVLLVEEILTAVRVKRHPNVVNVRFAHIMGFback to top mRNA from alignment at H-paniculata_contig4194:281..8726+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4194.10761.1 ID=mRNA_H-paniculata_contig4194.10761.1|Name=mRNA_H-paniculata_contig4194.10761.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8446bp|location=Sequence derived from alignment at H-paniculata_contig4194:281..8726+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4194:281..8726+ >mRNA_H-paniculata_contig4194.10761.1 ID=mRNA_H-paniculata_contig4194.10761.1|Name=mRNA_H-paniculata_contig4194.10761.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=5916bp|location=Sequence derived from alignment at H-paniculata_contig4194:281..8726+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |