mRNA_H-paniculata_contig4190.10755.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig4190.10755.1
Unique NamemRNA_H-paniculata_contig4190.10755.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig4190.10755.1 vs. uniprot
Match: D7G575_ECTSI (Magnesium chelatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G575_ECTSI)

HSP 1 Score: 1030 bits (2662), Expect = 0.000e+0
Identity = 512/651 (78.65%), Postives = 569/651 (87.40%), Query Frame = 1
Query:    1 QSGKGPAGPPAPVKALLSKFGSAKEEDRLAGYLKLLKIGPSLLKFVPGKKAKDLRSWLEIYAYWNEGGGDNVLSMFLTLGDRYLLPPGVAPPPGEVRETPALGLFHPSAGGYFANPREYVRWYE---ERQASQVEGES------RRRKMAPKGSPRVAVLLYRKHVVTRQEYISQMIRSMEADGLLPIPVFINGVEAHTVVRDLLTSSFEQRRREEGVIDTPTLSPDCAEVDAIVNTIGFPLVGGPAGSMEAGRRVDVATNILSAKDVPYVVAAPLLVQDLVGWRRDGVQGLQQVVLYSLPELDGAIDTVVLGGLVGDRIALVPERVRKLNQRLKGWIALRRTPQKDRKIAVLVYGFPPNVGAVGTAALLNVPASLEKVLKELMAQGYDLGDLGKDLDGETLVAALKVISQDSVVAKGFDNLQKAVDHAGSLGEENSYRITDSRGLGGGAITGAGIPAMDLDLYLGRTMTKRVATNWGELSRYRGVSTSGKGELVVGGLQLGNVFLGVQPLLGLEGDPMRLMFERDLTPHPQYAAFYEWIKADHGFGAQAVVHLGMHGTVEWLPGSPLGNTRETWPDLLLGGADGGCGGRHGARGEAEAFAEYARELSDYLLSLEQRLFSEGLHTLGHVPTAQEMQQYLVAYFGDQVPLEV 1926
            QSGKGP GPPAPVKALLSKFGS KEEDRLAGYLKLLK+GPSLLKFVPGKKAKDLRSWLEIY+YWN+GG +NVLSMFLTLGDRYLLPPG AP PGE++ETP LGLFHPSAG YF+NPREY++WYE   ER A+  +  +      R  K+AP GSPRVAVLLYRKHV+T+Q YISQMIR ME  GL+P+P+FINGVEAHTVVRDLLTSS EQR+R +GV+D  +LSPDC E+DA+VNTIGFPLVGGPAGSMEAGRRVDVATN+LS KDVPYVVAAPLL+QDLVGWRRDGVQGLQQVVLYSLPELDGAIDTVVLGGLVGD I L+PERVRK+N R+KGW+ LRRTP  DRK+AVLVYGFPPNVGAVGTAALLNVPASLEKVLKE+ A+GYDLG+ G ++DGE LVAALKVISQDSVVAKGFDNLQKAVDHAGSLG++NSYRI +  GLGG ++ G GIPA+DLD  L ++MT+++  NWGE+SRYRGVSTSGKG+LVVGGLQLGNVF+GVQPLLGLEGDPMRLMFERDLTPHPQYAAFYEW++ D GFGAQAVVHLGMHGTVEWLPGSPLGNTR TWPD LLG  D G  G   A      F EYARELS+YL +LEQRLFSEGLHTLGH P A E +QYL AYFGD +P +V
Sbjct:  126 QSGKGPGGPPAPVKALLSKFGSGKEEDRLAGYLKLLKVGPSLLKFVPGKKAKDLRSWLEIYSYWNQGGIENVLSMFLTLGDRYLLPPGTAPAPGELKETPVLGLFHPSAGRYFSNPREYMKWYEGEQERVAAAAKAAAATGVVMRGHKVAPAGSPRVAVLLYRKHVITKQGYISQMIRIMEKGGLIPVPIFINGVEAHTVVRDLLTSSEEQRQRAQGVLDIDSLSPDCVEIDAVVNTIGFPLVGGPAGSMEAGRRVDVATNLLSTKDVPYVVAAPLLIQDLVGWRRDGVQGLQQVVLYSLPELDGAIDTVVLGGLVGDTIGLIPERVRKMNDRIKGWVNLRRTPAGDRKVAVLVYGFPPNVGAVGTAALLNVPASLEKVLKEMKAKGYDLGEAGDNIDGEALVAALKVISQDSVVAKGFDNLQKAVDHAGSLGDDNSYRIANPAGLGGASVAGEGIPAIDLDQLLSKSMTQKIEVNWGEMSRYRGVSTSGKGDLVVGGLQLGNVFIGVQPLLGLEGDPMRLMFERDLTPHPQYAAFYEWVRGDQGFGAQAVVHLGMHGTVEWLPGSPLGNTRGTWPDALLG--DAGGTGPSSATTTRRLFMEYARELSEYLQTLEQRLFSEGLHTLGHAPAAAETEQYLAAYFGDDLPPDV 774          
BLAST of mRNA_H-paniculata_contig4190.10755.1 vs. uniprot
Match: A0A835ZAH4_9STRA (Magnesium chelatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAH4_9STRA)

HSP 1 Score: 790 bits (2041), Expect = 6.180e-270
Identity = 439/739 (59.40%), Postives = 499/739 (67.52%), Query Frame = 1
Query:   28 PAPVKALLSKFGSAKEEDRLAGYLKLLKIGPSLLKFVPGKKAKDLRSWLEIYAYWNEGGGDNVLSMFLTLGDRYLLPPGVAPPPGEVRETPALGLFHPSAGGYFANPREYVRWYEERQA-----SQVEGESRRRKM-----APKGSPRVAVLLYRKHVVTRQEYISQMIRSMEADGLLPIPVFINGVEAHTVVRDLLTSSFEQRRREEGVIDTPTL-SPDCAEVDAIVNTIGFPLVGGPAGSMEAGRRVDVATNILSAKDVPYVVAAPLLVQDLVGWRRDGVQGLQQVVLYSLPELDGAIDTVVLGGLVGDRIALVPERVRKLNQRLKGWIALRRTPQKDRKIAVLVYGFPPNVGAVGTAALLNVPASLEKVLKELMAQGYDLGDLGKDLDGETLVAALKVISQDSVVAKGFDNLQKAVDHAGSLGEENSYRITDSRGLGGGAITGAGIPAMDLDLYLGRTMTKRVATNWG-ELSRYRGVSTSGKGELVVGGLQLGNVFLGVQPLLGLEGDPMRLMFERDLTPHPQYAAFYEWIKADH-----GFGAQAVVHLGMHGTVEWLPGSPLGNTRETWPDLLLGG------------ADGGCGGRHG---------------------------------------------------------------ARGE-----AEAFAE---------YARELSDYLLSLEQRLFSEGLHTLGHVPTAQEMQQYLVAYF-GDQVPLE 1923
            PAPVKALLSKFGS KEEDRLAGYL  LK+GPSLLK+VPGKK  DLRSWLEIYAYWN+GG  NVLSMFL LGDRYLLP   AP P  + ETP  G+ HP         R+Y+ WY+ RQA     S   G S    +     AP G+P VAVLLYRKHV+T Q YI+ +I+S E  GLLP+P+FINGVEAHT+VRDLL+S FEQ++R  G+    TL S DC EVDAIVNTIGFPLVGGPAGSMEAGRRVDVAT+IL  K+VPY+VAAPLL+QDL  WR+ GVQGLQQVVL+SLPELDGA+D VVLGGLVGDRIALVPERVRKL  R+ GW  LRRTP  +RKIAVL+YGFPPNVGAVGTAALLNVP SLE +L+ +  QGYDLG  G  +DGE LVAALKV++QD+VVA+G   LQ AVDHA SLGEE SYR+ +  GL G  + G GIP MDLDLYL + MT +V   WG +L  Y+GV+TS  GE+VV GLQLGNVFLGVQPLLG+EGDPMRLMFERDLTPHPQYAAFY+W++        GFGAQA+VH GMHGTVEWLPGSPLGNT ETWPD LLGG            ++     R G                                                               A GE     AEA A          Y  +L DYLL LEQRLFSEGLH LG  P+  +  QYL A++ G  VP E
Sbjct:  210 PAPVKALLSKFGSGKEEDRLAGYLNFLKVGPSLLKYVPGKKVADLRSWLEIYAYWNQGGLGNVLSMFLVLGDRYLLPKDTAPDPSTLVETPPQGVIHPXXXXXXXXXRQYMDWYKGRQARATSSSTSNGSSSSLMLDGAPVAPVGAPVVAVLLYRKHVITGQGYIATLIKSFEEQGLLPVPIFINGVEAHTIVRDLLSSPFEQQQRARGIKGCETLRSADCVEVDAIVNTIGFPLVGGPAGSMEAGRRVDVATSILMTKNVPYMVAAPLLIQDLKSWRKVGVQGLQQVVLFSLPELDGAVDAVVLGGLVGDRIALVPERVRKLAGRVHGWTGLRRTPPSERKIAVLLYGFPPNVGAVGTAALLNVPQSLEALLRSMAEQGYDLGPFGDKIDGEALVAALKVMNQDAVVARGVSRLQAAVDHACSLGEECSYRVANKEGLAGARVVGQGIPPMDLDLYLSKRMTAKVERGWGGDLGSYKGVTTSANGEMVVAGLQLGNVFLGVQPLLGVEGDPMRLMFERDLTPHPQYAAFYKWLQGAGRGERGGFGAQAIVHFGMHGTVEWLPGSPLGNTFETWPDQLLGGMPNVYVYAANNPSESILAKRRGYGTIVSHNVPPYSRAGLYKELLSLKELIFEYRESPASNAPLRPTIAAQIARAGLFDDRPYPNAANGELSPEAAEAIATDDAVSEFDAYVADLGDYLLVLEQRLFSEGLHVLGAPPSPPQTLQYLSAFYEGGDVPAE 948          
BLAST of mRNA_H-paniculata_contig4190.10755.1 vs. uniprot
Match: A0A0G4EG49_VITBC (Magnesium chelatase n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EG49_VITBC)

HSP 1 Score: 701 bits (1808), Expect = 4.330e-234
Identity = 384/738 (52.03%), Postives = 476/738 (64.50%), Query Frame = 1
Query:    7 GKGPAGPPAPVKALLSKFGSAKEEDRLAGYLKLLKIGPSLLKFVPGKKAKDLRSWLEIYAYWNEGGGDNVLSMFLTLGDRYLLPPGVAPPPGEVRETPALGLFHPSAGGYFANPREYVRWYEERQASQVEGESRRRKMAPKGSPRVAVLLYRKHVVTRQEYISQMIRSMEADGLLPIPVFINGVEAHTVVRDLLTSSFEQRRREEGVIDTPTLSPDCAEVDAIVNTIGFPLVGGPAGSMEAGRRVDVATNILSAKDVPYVVAAPLLVQDLVGWRRDGVQGLQQVVLYSLPELDGAIDTVVLGGLVGDRIALVPERVRKLNQRLKGWIALRRTPQKDRKIAVLVYGFPPNVGAVGTAALLNVPASLEKVLKELMAQGYDLGD-LGKD--LDGETLVAALKVISQDSVVAKGFDNLQKAVDHAGSLGEENSYRITDSRGLGGGA-------------ITGAGIPAMDLDLYLGRTMTKRVATNWGELSRYRGVSTSGKGELVVGGLQLGNVFLGVQPLLGLEGDPMRLMFERDLTPHPQYAAFYEWIKADHGFGAQAVVHLGMHGTVEWLPGSPLGNTRETWPDLLLG------------------------------------------------------------------------------------GAD----GGCGGRHGARGEAEAFAEYARELSDYLLSLEQRLFSEGLHTLGHVPTAQEMQQYLVAYFGD 1908
            G+GPAGPP  VKALL +FG+ +EEDRLAGYL  LK+GP LL++VPG KA+DLRSWLEIY+YWN+GG +NV++MFL +G  +LLP    P PG +RETP +GL+HP A  YF+ P EY++WYE  +            +AP GSPRVA+LLYRKHV+T Q+YI  +IRSME +GL P+PVFI GVEAHT+VRDLLT+S+EQ++R  GVI    LS D   V+AIVNTIGFPLVGGPAGSMEAGR+ +V+T +LS+K+VPY+VAAPLLVQD+  W R+GVQGLQ VVL++LPELDGA+D VVLGGLV D+IALVPERVRKL  RL GWI LR TP K+RKIA+++YGFPPNVGA GTAALLNVP SL+ +L++L  QGYDLG  +G D  +DGE +VAALKV+ QD +V  G   ++ A+ +A    EE++  +     L   +             I   GI +  L   L   +  +V   WGEL +   +  S +GE VV G+QLGNV++GVQPLLGLEGDPMRL+FERDLTPHPQY AFYEW++   G GAQA VH GMHGTVEWLPGSPLGNT  TWPD LLG                                                                                    G D    G        + +++AF ++  +L+DYLL LEQRLFSEGLH LGH P+  +M QYL  YF +
Sbjct:  205 GEGPAGPPPAVKALLRQFGNKREEDRLAGYLNFLKVGPKLLQYVPGDKARDLRSWLEIYSYWNQGGLENVVNMFLYIGRNFLLPKEKVPAPGALRETPTVGLYHPFADDYFSTPAEYLKWYESEKGFDAA-------LAPPGSPRVAILLYRKHVLTHQKYIDVLIRSMEKEGLTPVPVFITGVEAHTIVRDLLTTSYEQQQRNRGVIANEGLSKDAIAVEAIVNTIGFPLVGGPAGSMEAGRQTEVSTQLLSSKNVPYLVAAPLLVQDIPSWMRNGVQGLQSVVLFALPELDGAVDPVVLGGLVADKIALVPERVRKLAARLNGWIRLRNTPPKERKIAIILYGFPPNVGATGTAALLNVPDSLQGLLEQLKTQGYDLGPAVGPDGKVDGEAIVAALKVLVQDPLVRAGPKYMRSAIVNAAR--EESARSLVSGPALNINSTWLRHALKDDPNLIRAQGITSKRLRRALRPILASKVEKGWGELEQVNFIGQSSEGEFVVQGVQLGNVWIGVQPLLGLEGDPMRLLFERDLTPHPQYFAFYEWLRT--GLGAQACVHFGMHGTVEWLPGSPLGNTGLTWPDRLLGDIPNVYIYAANNPSESILAKRRGYGTLVSHNVPPYARAGLYKELALLRDLIGEYRSEPDKNQALKPAIVEKVRLVGLFQDCPWEGTDTAEEGVLSTDEADKVDSKAFGDWLFKLNDYLLVLEQRLFSEGLHCLGHPPSQSQMLQYLEGYFAE 931          
BLAST of mRNA_H-paniculata_contig4190.10755.1 vs. uniprot
Match: A0A1Y1HWX1_KLENI (Magnesium chelatase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HWX1_KLENI)

HSP 1 Score: 667 bits (1720), Expect = 1.870e-220
Identity = 362/724 (50.00%), Postives = 449/724 (62.02%), Query Frame = 1
Query:   22 GPPAPVKALLSKFGSAKEEDRLAGYLKLLKIGPSLLKFVPGKKAKDLRSWLEIYAYWNEGGGDNVLSMFLTLGDRYLLPPGVAPPPGEVRETPALGLFHPSAGGYFANPREYVRWYEERQASQVEGESRRRKMAPKGSPRVAVLLYRKHVVTRQEYISQMIRSMEADGLLPIPVFINGVEAHTVVRDLLTSSFEQRRREEGVIDTPTLSPDCAEVDAIVNTIGFPLVGGPAGSMEAGRRVDVATNILSAKDVPYVVAAPLLVQDLVGWRRDGVQGLQQVVLYSLPELDGAIDTVVLGGLVGDRIALVPERVRKLNQRLKGWIALRRTPQKDRKIAVLVYGFPPNVGAVGTAALLNVPASLEKVLKELMAQGYDLGDLGKDLDGETLVAALKVISQDSVVAKGFDNLQKAVDHAGSLGEENSYRITDSRGLGGGAITGAGIPAMD---LDLYLGRTMTKRVATNWGELSRYRGVSTSGKGELVVGGLQLGNVFLGVQPLLGLEGDPMRLMFERDLTPHPQYAAFYEWIKADHGFGAQAVVHLGMHGTVEWLPGSPLGNTRETWPDLLLG---------------------------------------------------------------------------GADGGCGGRHGARG-EAEAFAE-------------YARELSDYLLSLEQRLFSEGLHTLGHVPTAQEMQQYLVAYFGDQVP 1917
            G PAPVKA+LSKFG  +EED++ GYL  LKIGP LL+F+PGKK +DLR+WL +Y YWN+GG DNV+SM L L D YL+  G+AP    ++ETPALGL+HP   GYF +   Y+ W+            R  K  P G+P VA+LLYRKHV+T Q+YI ++IR+ E+DGL P+P+FINGVEAHTVVRDLLT+ +EQ RR   ++D P+L  D A V A+V+T+GFPLVGGPAG+ME GR+ ++A  ILSAK+VPYVV+APLL+QD+  W RDGVQGLQ VVLYSLPELDGAID V LGGLVGD I LVPERVR+L  RLK WI+LR  P  +R +A+++YGFPP VGA GTAALLNVP SLE +L  L  +GYDLGD    ++GE L+  LK +  + V+ KG      A+ +A +  E N  ++  +  L         +  +D   L  ++G T+T R+   WGEL RYRG+ +   G  VV G+QLGNVF+ VQPLLGLEGDPMRL+FERDLTPHPQYAAFY+W++ D    A AV+H GMHGTVEWLPGSPLGNT  +W D+LLG                                                                           G D  C  R    G EA    E             Y   L +YL  +E RLFSEGLHTLG  PT  +MQQYL AY GD +P
Sbjct:  386 GMPAPVKAVLSKFGGGREEDKMVGYLSFLKIGPKLLRFLPGKKVRDLRNWLTVYGYWNQGGLDNVVSMLLYLTDEYLVKTGLAPV--TLKETPALGLYHPDYDGYFESTSAYLSWHR-----------RTNKTLPPGAPTVAILLYRKHVITNQKYIPRLIRAFESDGLRPLPIFINGVEAHTVVRDLLTTKYEQDRRSRRILDIPSLKKDAAFVGAVVSTVGFPLVGGPAGTMEGGRQAEIAKQILSAKNVPYVVSAPLLIQDIPSWLRDGVQGLQSVVLYSLPELDGAIDAVPLGGLVGDGIHLVPERVRRLTSRLKKWISLRAKPASERNVAIVLYGFPPGVGATGTAALLNVPRSLEALLGRLKQEGYDLGDGPDGINGEQLIEVLKQLDDERVLMKGEAGGDDALAYARTRVEGNGGQLQATTPL---------VKTVDYRTLKRWIGETLTGRMERTWGELHRYRGIRSDATGASVVSGVQLGNVFIAVQPLLGLEGDPMRLLFERDLTPHPQYAAFYKWLQND--MAADAVIHFGMHGTVEWLPGSPLGNTGSSWSDVLLGALPNVYIYAANNPSESIVAKRRGYGTIVSYNVPPYGRAGLYKELASLRELLQEYREDPVANASLRGSIVGVLSTSGLDSDCPFREATPGSEAVTLGEDDVSTVSDAEFDAYVSRLYEYLSVVENRLFSEGLHTLGEPPTVDQMQQYLSAYLGDDLP 1085          
BLAST of mRNA_H-paniculata_contig4190.10755.1 vs. uniprot
Match: A0A6H5KFU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFU3_9PHAE)

HSP 1 Score: 642 bits (1655), Expect = 3.410e-215
Identity = 337/516 (65.31%), Postives = 374/516 (72.48%), Query Frame = 1
Query:  664 VDAIVNTIGFPLVGGPAGSMEAGRRVDVATNILSAKDVPYVVAAPLLVQDLVGWRRDGVQGLQQVVLYSLPELDGAIDTVVLGGLVGDRIALVPERVRKLNQRLKGWIALRRTPQKDRKIAVLVYGFPPNVGAVGTAALLNVPASLEKVLKELMAQGYDLGDLGKDLDGETLVAALKVISQDSVVAKGFDNLQKAVDHAGSLGEENSYRITDSRGLGGGAITGAGIPAMDLDLYLGRTMTKRVATNWGELSRYRGVSTSGKGELVVGGLQLGNVFLGVQPLLGLEGDPMRLMFERDLTPHPQYAAFYEWIKADHGFGAQAVVHLGMHGTVEWLPGSPLGNTRETWPDLLLGG-----------------------------------------------------------------------------------ADGGCGGRHG-----------ARGE-AEAFAEYARELSDYLLSLEQRLFSEGLHTLGHVPTAQEMQQYLVAYFGDQVPLEV 1926
            +DA+VNTIGFPLVGGPAGSMEAGRRVDVATN+LS KDVPYVVAAPLL+QDLVGWRRDGVQGLQQVVLYSLPELDGAIDTVVLGGLVGD I LVPERVRK+N R+KGW+ LRRTP  DRK+AVLVYGFPPNVGAVGTAALLNVPASLEKVLK + A+GYDLG+ G ++DGE LV     ISQDSVVAKGFDNLQKAVDHAGSLG++NSYRI +  GLGG ++ G G+PA+DLD  L ++MT+++  NWGE+SRYRGVSTSGKG+LVVGGLQLGNVF+GVQPLLGLEGDPMRLMFERDLTPHPQYAAFYEW++ + GFGAQAVVHLGMHGTVEWLPGSPLGNTR TWPD LLG                                                                                     +GG GG  G           A GE AE F EYARELS+YL +LEQRLFSEGLHTLGH PTA E +QYL AYFGD +P +V
Sbjct:   37 IDAVVNTIGFPLVGGPAGSMEAGRRVDVATNLLSTKDVPYVVAAPLLIQDLVGWRRDGVQGLQQVVLYSLPELDGAIDTVVLGGLVGDTIGLVPERVRKMNDRIKGWVNLRRTPAGDRKVAVLVYGFPPNVGAVGTAALLNVPASLEKVLKAMKAKGYDLGEAGDNIDGEALV-----ISQDSVVAKGFDNLQKAVDHAGSLGDDNSYRIANPTGLGGASVAGQGVPAIDLDQLLSKSMTQKIEVNWGEMSRYRGVSTSGKGDLVVGGLQLGNVFIGVQPLLGLEGDPMRLMFERDLTPHPQYAAFYEWLRGEKGFGAQAVVHLGMHGTVEWLPGSPLGNTRGTWPDALLGDMPNAYVYAANNPSESILAKRRGYGTIISHNVPPYSRAGLYKQLATLKDLLREFREDPVKNASLRPVIAATMQQAGLYEDLPFPGNGGEGGEGGVLTAEAAEELPAEGEDAEVFVEYARELSEYLQTLEQRLFSEGLHTLGHAPTAAETEQYLAAYFGDDLPPDV 547          
BLAST of mRNA_H-paniculata_contig4190.10755.1 vs. uniprot
Match: I0Z594_COCSC (Magnesium chelatase (Fragment) n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z594_COCSC)

HSP 1 Score: 638 bits (1646), Expect = 5.070e-213
Identity = 359/724 (49.59%), Postives = 447/724 (61.74%), Query Frame = 1
Query:   22 GPPAPVKALLSKFGSAKEEDRLAGYLKLLKIGPSLLKFVPGKKAKDLRSWLEIYAYWNEGGGDNVLSMFLTLGDRYLLPPGVAPPPGEVRETPALGLFHPSAGGYFANPREYVRWYEERQASQVEGESRRRKMAPKGSPRVAVLLYRKHVVTRQEYISQMIRSMEADGLLPIPVFINGVEAHTVVRDLLTSSFEQRRREEGVID-TPTLSPDCAEVDAIVNTIGFPLVGGPAGSMEAGRRVDVATNILSAKDVPYVVAAPLLVQDLVGWRRDGVQGLQQVVLYSLPELDGAIDTVVLGGLVGDRIALVPERVRKLNQRLKGWIALRRTPQKDRKIAVLVYGFPPNVGAVGTAALLNVPASLEKVLKELMAQGYDLGDL---GKDLDGETLVAALKVISQDSVVAKGFDNLQKAVDHAGSLGEENSYRITDSRGLGGGAITGAGIPAMDLDLYLGRTMTKRVATNWGELSRYRGVSTSGKGELVVGGLQLGNVFLGVQPLLGLEGDPMRLMFERDLTPHPQYAAFYEWIKADHGFGAQAVVHLGMHGTVEWLPGSPLGNTRETWPDLLLGGADG------------------GCG----------GRHG--------------------------------------------------ARGEAE-------------AFAEYARELSDYLLSLEQRLFSEGLHTLGHVPTAQEMQQYLVAYFGD 1908
            GPP  VK +LS FGS +EEDR+ GYL  LKIGP LLKF+PG+K +DLR+WL IY+YWN+GG DNV +M L L D+YL   G+AP P  V+ETP  G  HP   GYF+ P EY+ WY +  A +   E+          P VAVLLYRKHV+T Q YI+Q++R  EADG+ P+P+FING+EAHTVVRDLLT+  EQ+ + +G      +L  D   VDAIV+TIGFPLVGGPAG+ME GR+ DVA +IL+AK+VPYVVAAPLL+QDL  W RDGV GLQ VVLYSLPELDGA+DTV LGGLVGD I LVPERV++L+ RL+ W+ LRRTP ++RK+A+L+YGFPP VGA GTAALLNVP SLE++L++L  QGYDLG+    G  +DGE +V AL++      ++KG                        + G+ GG +     P  DL       +   +   WG+L RYRG+ TS KGE VVGG+QLG V++GVQP LG+EGDPMRL+FERDLTPHPQYAAFY+W++  H + A AV+H GMHGTVEWLPG+PLGN+  +W D+LLG                      G G          GR G                                                  A G+AE             AFAEYA  ++ YL  +E RLFSEGLH LG  P   +M+QYL AYFG+
Sbjct:  111 GPPPAVKKVLSLFGSGREEDRMVGYLSFLKIGPKLLKFLPGQKVRDLRNWLTIYSYWNQGGQDNVATMLLYLVDQYLGRTGIAPAP--VQETPPTGCLHPDYDGYFSTPAEYLAWYAKHGALRDRAEA----------PTVAVLLYRKHVITGQGYIAQLVRCFEADGVRPVPIFINGIEAHTVVRDLLTTDHEQQLKAQGKPGPASSLKKDAVRVDAIVSTIGFPLVGGPAGTMEGGRQADVAKSILTAKNVPYVVAAPLLIQDLASWTRDGVAGLQSVVLYSLPELDGAVDTVPLGGLVGDNIFLVPERVKRLSARLRKWVHLRRTPPQERKVALLLYGFPPGVGATGTAALLNVPKSLERMLEQLQEQGYDLGEAIGGGAKIDGEAIVDALRLQEDQRSISKG------------------------AAGIEGGFL-----PQHDL-------LVANMERQWGDLDRYRGLGTSAKGEFVVGGVQLGKVWIGVQPALGVEGDPMRLLFERDLTPHPQYAAFYKWLQ--HDYAADAVLHFGMHGTVEWLPGAPLGNSGFSWSDVLLGNLPNVYVYAANNPSESIIAKRRGYGTIVSHNVPPYGRAGLYKQLAELKALVAEYREDPAKNSALKVPIVENLMSSGLQEDCPFIAASSTADGKAEYLNAESVDGIDTEAFAEYAGRINQYLQVVEGRLFSEGLHVLGQPPGPDQMRQYLSAYFGE 784          
BLAST of mRNA_H-paniculata_contig4190.10755.1 vs. uniprot
Match: W7TLF6_9STRA (Magnesium chelatase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TLF6_9STRA)

HSP 1 Score: 650 bits (1678), Expect = 1.040e-212
Identity = 340/574 (59.23%), Postives = 421/574 (73.34%), Query Frame = 1
Query:   22 GPPAPVKALLSKFGSAKEEDRLAGYLKLLKIGPSLLKFVPGKKAKDLRSWLEIYAYWNEGGGDNVLSMFLTLGDRY-LLPPGVA---PPPGEVRETPALGLFHPSAGGYFANPREYVRWYEERQASQVEGESRRRKMAPKGSPRVAVLLYRKHVVTRQEYISQMIRSMEADGLLPIPVFINGVEAHTVVRDLLTSSFEQRRREEGVIDTPTLSPDCAEVDAIVNTIGFPLVGGPAGSMEAGRRVDVATNILSAKDVPYVVAAPLLVQDLVGWRRDGVQGLQQVVLYSLPELDGAIDTVVLGGLVGDRIALVPERVRKLNQRLKGWIALRRTPQKDRKIAVLVYGFPPNVGAVGTAALLNVPASLEKVLKELMAQGYDLGDLGKDLDGETLVAALKVISQDSVVAKGFDNLQKAVDHAGSLGEENSYRITDSRGLGGGA-----ITGAGIPAMDLDLYLGRTMTKRVATNWGELSRYRGVSTSGKGELVVGGLQLGNVFLGVQPLLGLEGDPMRLMFERDLTPHPQYAAFYEWIKADHGFGAQAVVHLGMHGTVEWLPGSPLGNTRETWPDLLLG 1716
            GPP  VKALLSKFGS +EEDRL GYL  LKIGP +L+ VPG+KA+D+R+WLE+YAYWN+GG  NV+S+FL L  R+ LL P  +     P +V+ETPA GL HP       +P++Y+RWY +R A     ++     +P+ +PRVAVLLYRKHV+T Q YI+Q++R +E +GLLP+P+FINGVE HTVVRDLLT+ FEQ  R  G+    +LSP+  EVDA++NTIGFPLVGGPAGSMEAGRRVDVAT +L+AK+VP +VAAPLL+QDL  WR  GV GLQ  VLYSLPELDGA+DTVVLGGLVGD+IA+VPER RKL +R+ GW  LR TP K++K+++L YGFPPNVGA+GTAALLNVP SLEK+L  L  QGYD G   + +DGE+++A L  I+Q++VVA G   +   V+ AG+    N        G  GG      IT  GI        +G     RV   WGEL  Y G+ TS  GELVVGG+QLGNV++G+QPLLG+EGDPMRL+FERDLTPHPQY AFY+W++  + F AQAVVH G HGT EWLPGSPLGNT  TWPD+L+G
Sbjct:  334 GPPPVVKALLSKFGSQREEDRLKGYLSFLKIGPRILRMVPGRKARDIRTWLEVYAYWNQGGAANVVSLFLLLVRRFSLLGPEASRALAQPLQVKETPAQGLIHPLTPRILQSPKQYLRWYVDRAARGRVQDAM--VSSPQTAPRVAVLLYRKHVITNQVYIAQLLRILEKEGLLPVPIFINGVEGHTVVRDLLTTRFEQEERRRGLRRIDSLSPEAVEVDAVINTIGFPLVGGPAGSMEAGRRVDVATRLLAAKNVPLLVAAPLLLQDLSSWRERGVLGLQSAVLYSLPELDGAVDTVVLGGLVGDKIAIVPERARKLARRILGWHQLRVTPAKEKKVSILCYGFPPNVGAIGTAALLNVPRSLEKLLIALQEQGYDTGLDARKIDGESVIAILTAINQEAVVAGGPKKMHAMVE-AGTFDGGN--------GAAGGEMLKARITAEGILPGAFRAAVGERTAARVEKMWGELEGYVGLFTSQAGELVVGGVQLGNVWIGIQPLLGIEGDPMRLLFERDLTPHPQYVAFYDWMR--NSFKAQAVVHFGTHGTAEWLPGSPLGNTATTWPDILMG 894          
BLAST of mRNA_H-paniculata_contig4190.10755.1 vs. uniprot
Match: K0RAM2_THAOC (Magnesium chelatase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RAM2_THAOC)

HSP 1 Score: 641 bits (1654), Expect = 9.220e-212
Identity = 371/737 (50.34%), Postives = 471/737 (63.91%), Query Frame = 1
Query:    4 SGKGPAGPPAPVKALLSKFGSAKEEDRLAGYLKLLKIGPSLLKFVPGKKAKDLRSWLEIYAYWNEGGGDNVLSMFLTLGDRYLLPPGVAPPPG-----EVRETPALGLFHP------SAGGYFANPREYVRWYEERQASQVEGESRRRK--MAPKGSPRVAVLLYRKHVVTRQEYISQMIRSMEADGLLPIPVFINGVEAHTVVRDLLTSSFEQRRREEGVIDT-PTLSP-DCAEVDAIVNTIGFPLVGGPAGSMEAGRRVDVATNILSAKDVPYVVAAPLLVQDLVGWRRDGVQGLQQVVLYSLPELDGAIDTVVLGGLVGDRIALVPERVRKLNQRLKGWIALRRTPQKDRKIAVLVYGFPPNVGAVGTAALLNVPASLEKVLKELMAQGYDLGDLGKDLD--GETLVAALKVISQDSVVAKGFDNLQKAVD--HAGSLGEENSYRITDSR---GLGGGAITGAGIPAMDLDLYLGRTMTKRVATNWGELSRYRGVSTSGKGELVVGGLQLGNVFLGVQPLLGLEGDPMRLMFERDLTPHPQYAAFYEWIKA---DHGFGAQAVVHLGMHGTVEWLPGSPLGNTRETWPDLLLGGADG------------------GCG----------GRHGAR-----------------------------------------------GEAEAFAEYARELSDYLLSLEQRLFSEGLHTLGHVPTAQEMQQYLVAYFGDQV 1914
            +G GP+GPP  VKA+LSKF S +EED+LAGYL+LLK+GP LLKFVPG+KA DLR+W+E Y YWN+GG  NV SM   L  +       A   G     E+  TPA GL HP       +  Y ++P+ Y+ W   R +S     ++ RK  +AP  +PRVA+LLYRKHV+T Q YI+ +IR+MEA+GL+P+PVFINGVEAH +VRD LTS  E  +   G     PT  P + AEVDA+VNTIGFPLVGGPAGSMEAGR VD+++ +LS  DVPYVVA+PLL+Q +  W+  GV GLQ VVLYSLPELDGA+DTVVLGGLVGD+IALVPERVRKL  RL GW+ LRRTP KDR+I+V++YGFPPNVGAVGTAALL+VP+SL+ +LK L  +GY++G    D +  GE+LVAAL V+ +++V+A GF+ +Q AV+     + G + +   T +R   GLGG  + GA +   DL+  LG+ M ++V   W E  R  GV+   K E+VV GLQLGNVF+ VQPLLG+EGDPMRL+FERDLTPHPQY A Y+++++   + G G+QAVVHLGMHGTVEWLPG PLGN R++W D LLG                      G G          GR G                                                  + E+F +Y   LS+YL+ LE+RLFS GLHTLG  PT  E+  YL AYF  ++
Sbjct:  215 AGDGPSGPPPAVKAVLSKFSSGREEDKLAGYLELLKVGPELLKFVPGEKAGDLRTWMEAYRYWNQGGLSNVRSMLQLLVSKMRKNAAAAANAGDLTLPELVVTPATGLLHPLLVDESGSMAYASDPKSYMDW---RLSSACAKSAKERKFPLAPDDAPRVALLLYRKHVITGQRYIADLIRAMEAEGLMPVPVFINGVEAHAIVRDWLTSDREVEKVNSGAATREPTYKPNEAAEVDAVVNTIGFPLVGGPAGSMEAGRNVDLSSKLLSDMDVPYVVASPLLLQSITTWKECGVLGLQSVVLYSLPELDGAVDTVVLGGLVGDKIALVPERVRKLAGRLNGWVGLRRTPVKDRRISVVLYGFPPNVGAVGTAALLDVPSSLDNLLKRLDKEGYNVGKYASDPNSSGESLVAALSVLCENAVIAGGFERMQSAVEVRMERARGGDPTVAETLARPGGGLGGAVVKGANVEFDDLENMLGKYMARKVRRAWPESERGPGVNA--KNEMVVSGLQLGNVFVTVQPLLGVEGDPMRLLFERDLTPHPQYCAAYKYMQSGEDEGGAGSQAVVHLGMHGTVEWLPGQPLGNDRQSWSDELLGSLPNVYVYAANNPSESILAKRRGYGTLVSYNVPPYGRAGLYLELASLKDLVNEFRSDSAESRADLRESILAQCERTGLTSDISPPCDDADEESFDDYITSLSNYLVELEERLFSSGLHTLGDAPTDLELASYLNAYFAGRL 946          
BLAST of mRNA_H-paniculata_contig4190.10755.1 vs. uniprot
Match: A0A7S3BBY8_9VIRI (Magnesium chelatase (Fragment) n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3BBY8_9VIRI)

HSP 1 Score: 626 bits (1615), Expect = 2.050e-211
Identity = 357/736 (48.51%), Postives = 459/736 (62.36%), Query Frame = 1
Query:   19 AGPPAPVKALLSKFGSAKEEDRLAGYLKLLKIGPSLLKFVPGKKAKDLRSWLEIYAYWNEGGGDNVLSMFLTLGDRYL-LPPGVAPPPGEVRETPALGLFHPSA--GGYFANPREYVRWYEERQASQVEGESRRRKMAPKGSPRVAVLLYRKHVVTRQEYISQMIRSMEADGLLPIPVFINGVEAHTVVRDLLTSSFEQRRREEGVIDTPTLSP-DCAEVDAIVNTIGFPLVGGPAGSMEAGRRVDVATNILSAKDVPYVVAAPLLVQDLVGWRRDGVQGLQQVVLYSLPELDGAIDTVVLGGLVGDRIALVPERVRKLNQRLKGWIALRRTPQKDRKIAVLVYGFPPNVGAVGTAALLNVPASLEKVLKELMAQGYDLGDLGKDLD----GETLVAALKVISQDSVVAKGFDNLQKAVDHAGSLGEENSYRITDSRGLGGGAITGAGIPAMDLDLYL--------GRTMTKRVATNWGELSRYRGVSTSGKGELVVGGLQLGNVFLGVQPLLGLEGDPMRLMFERDLTPHPQYAAFYEWIKADHGFGAQAVVHLGMHGTVEWLPGSPLGNTRETWPDLLLGGADG------------------GCG----------GR-------------------------HGARG----------------------------------EAEAFAEYARELSDYLLSLEQRLFSEGLHTLGHVPTAQEMQQYLVAYFGDQVP 1917
            AGPPAPVKA+LSKFG  +EED+LAGYL  LKIGP LL++VPGKKA+DLR+WL  YA+WN+GG  NV SM + L +  L +  G+ P   E+ ETPALGL+HP+A  G YF  PREY+RW+ E    + +G     K+ P  +P VAV+LYRKHV+T+Q YI Q++  +E  GL P+PVFINGVEAHTVVRDLLT+  EQ +R  G+++  +L   +C  VDAIV+T+GFPLVGGPAGS+E  R+++VA+ IL AK+VPYVVAAPLL+QD++ W R GV GLQQVVLY+LPELDGA+DTV LG L GD+I L+ ERV KL  RL GWI L + P   +K+A++VYGFPP VGA GTAALLNVP SLE+ L+ L A+G+DLG LG D++    GE +V AL+ +    +VA+G     +A   A   G   +  +  +  L    +    +PA  L  +L         R++  RV T WG L RYRG+ T  +G  VVGGLQ+G+VF+GVQPLLG+EGDPMRL+FERDLTPHPQY A+Y W+  +H +GA A VH GMHGT EWLPGSPLGNT ++W D L+GG                     G G          GR                          G RG                                  +A+ F ++A  +  YL  +E RLFSEGLHTLG  P A++++QYL AY   ++P
Sbjct:  155 AGPPAPVKAILSKFGGGREEDKLAGYLSFLKIGPKLLRWVPGKKARDLRNWLTAYAFWNQGGERNVASMLVYLAEEVLGVETGLEP--DELVETPALGLWHPAAPRGKYFERPREYLRWHRE----EYQGSPGTPKL-PLDAPVVAVILYRKHVITKQGYIWQLLLGLERKGLRPLPVFINGVEAHTVVRDLLTTEHEQAQRAAGLVELDSLKERECVAVDAIVSTVGFPLVGGPAGSLEGARQIEVASAILKAKNVPYVVAAPLLIQDVLSWTRSGVAGLQQVVLYALPELDGAVDTVPLGALSGDKIVLLQERVDKLADRLNGWIGLAQKPAAAKKVAIMVYGFPPGVGATGTAALLNVPKSLERALEALRAEGFDLGPLGGDVELEGKGELIVGALEALGDPRLVAEG-----RAPRTAAEAGATPNPLLDPTSELCCARVDT--VPAPQLREWLEGGVGLRDARSLLDRVETQWGPLERYRGIMTDNQGSAVVGGLQIGSVFIGVQPLLGVEGDPMRLLFERDLTPHPQYVAYYNWL--EHVWGADAYVHFGMHGTAEWLPGSPLGNTADSWSDALMGGVPNVYVYAANNPSESIVAKRRGYGTIVSHNVPPYGRAGLYKQLNTLRDLLSEYREDPVKNDEGLRGPIAETALSAGLERDCPFDEGIPDAEFSSEVAEAADADTFGQWASRMWTYLQVVETRLFSEGLHTLGVAPGAEQVEQYLEAYMDGRLP 874          
BLAST of mRNA_H-paniculata_contig4190.10755.1 vs. uniprot
Match: A0A6P0VSE9_9CYAN (Magnesium chelatase (Fragment) n=1 Tax=Symploca sp. SIO1A3 TaxID=2607766 RepID=A0A6P0VSE9_9CYAN)

HSP 1 Score: 610 bits (1573), Expect = 1.890e-206
Identity = 353/743 (47.51%), Postives = 438/743 (58.95%), Query Frame = 1
Query:    7 GKGPAGPPAPVKALLSKFGSAKEEDRLAGYLKLLKIGPSLLKFVPGKKAKDLRSWLEIYAYWNEGGGDNVLSMFLTLGDRYL-LPPGVAPPPGEVRETPALGLFHPSAGGYFANPREYVRWYEERQASQVEGE---------------SRRRKMAPKGSPRVAVLLYRKHVVTRQEYISQMIRSMEADGLLPIPVFINGVEAHTVVRDLLTSSFEQRRREEGVIDTPTLSPDCAEVDAIVNTIGFPLVGGPAGSMEAGRRVDVATNILSAKDVPYVVAAPLLVQDLVGWRRDGVQGLQQVVLYSLPELDGAIDTVVLGGLVGDRIALVPERVRKLNQRLKGWIALRRTPQKDRKIAVLVYGFPPNVGAVGTAALLNVPASLEKVLKELMAQGYDLGDLGKDLDGETLVAALKVISQDSVVAKGFDNLQKAVDHAGSLGEENSYRITDSRGLGGGAITGAGIPAMDLDLYLGRTMTKRVATNWGELSRYRGVSTSGKGELVVGGLQLGNVFLGVQPLLGLEGDPMRLMFERDLTPHPQYAAFYEWIKADHGFGAQAVVHLGMHGTVEWLPGSPLGNTRETWPDLLLGGADG------------------GCG----------GRHGARGEAEA-----------------------------------------------------------FAEYARELSDYLLSLEQRLFSEGLHTLGHVPTAQEMQQYLVAYFGDQVPLEV 1926
            G  P G P P+K +LSKF S KEEDRL GYL  LK GP LLK++P KK +DLR+WL IY YWN GG DNV SMF T+ ++YL +  G  PPP E   TP +GL HP   GYF +PR+Y+ WY+ R+                      + +  +       VA+LLYRKHV+T+Q YI Q+IR  E  GL+P+P+FINGVE H  VRD LTSS+E  +R++G  +T +LSP+  EVDAIV+TIGFPLVGGPAGSMEAGR+V VA  IL+AK++PY++AAPLL+QD+  W R G+ GLQ VVLY+LPELDGAIDTV LGGLVG+ I L+PERV++L  R+K WIALR+TP   RKIA+++YGFPP  GA GTAALLNVP SL K L+ L AQGYD+G+L    DGE L+  +K    D V+ K   N Q+           N+                       L+ +LG  +T R+   W  L+   G+ T G  EL VGG+QLGNV+LGVQP LG+ GDPMRLMFERDLTPHPQYAAFY+W++ D  F   AVVH GMHGTVEWLPGSPLGNT  +W D+LLG                      G G          GR G   E  A                                                           F +Y  +L DYL  +EQRLFS GLHTLG  P A++++ YL AYFG+++P EV
Sbjct:  104 GDKPKGMPKPIKFILSKFSSGKEEDRLVGYLSFLKTGPKLLKYIPAKKVQDLRNWLIIYGYWNAGGSDNVASMFWTIAEKYLGVKVGTIPPPVE---TPNMGLLHPDYDGYFESPRQYLEWYQGRRTRXXXXXXXXXXXXXXXXXDIPNSQFPIXXXXXXIVAILLYRKHVITKQPYIPQLIRYFEEAGLIPLPIFINGVEGHVAVRDWLTSSYETAQRQQGNRETLSLSPEAVEVDAIVSTIGFPLVGGPAGSMEAGRQVAVAKRILTAKNIPYIIAAPLLIQDIYSWTRQGIGGLQSVVLYALPELDGAIDTVPLGGLVGEDIYLIPERVQRLTGRVKRWIALRQTPTAKRKIAIILYGFPPGYGATGTAALLNVPRSLVKFLQALQAQGYDIGEL--PTDGEELIRRVK--EADEVLIKPTTNNQQXXXXXXXXXXVNTNT---------------------LEQWLGYLLTTRIEKQWQSLNG-TGIKTDGD-ELFVGGVQLGNVWLGVQPPLGIAGDPMRLMFERDLTPHPQYAAFYKWLQND--FNPDAVVHFGMHGTVEWLPGSPLGNTGYSWSDILLGDMPNLYIYAANNPSESMLAKRRGYGVLISHNVPPYGRAGLYKELMALRDLIAEYRENPEKNYVLKEAICKKIVDSGLEADCNFEDAHRLGIDFTPENVQLFSDHSFNDYLVKLYDYLQIVEQRLFSSGLHTLGEAPNAEQLKSYLQAYFGEELPEEV 814          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4190.10755.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G575_ECTSI0.000e+078.65Magnesium chelatase n=1 Tax=Ectocarpus siliculosus... [more]
A0A835ZAH4_9STRA6.180e-27059.40Magnesium chelatase n=1 Tax=Tribonema minus TaxID=... [more]
A0A0G4EG49_VITBC4.330e-23452.03Magnesium chelatase n=3 Tax=Vitrella brassicaformi... [more]
A0A1Y1HWX1_KLENI1.870e-22050.00Magnesium chelatase n=1 Tax=Klebsormidium nitens T... [more]
A0A6H5KFU3_9PHAE3.410e-21565.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
I0Z594_COCSC5.070e-21349.59Magnesium chelatase (Fragment) n=1 Tax=Coccomyxa s... [more]
W7TLF6_9STRA1.040e-21259.23Magnesium chelatase n=2 Tax=Monodopsidaceae TaxID=... [more]
K0RAM2_THAOC9.220e-21250.34Magnesium chelatase n=1 Tax=Thalassiosira oceanica... [more]
A0A7S3BBY8_9VIRI2.050e-21148.51Magnesium chelatase (Fragment) n=1 Tax=Prasinoderm... [more]
A0A6P0VSE9_9CYAN1.890e-20647.51Magnesium chelatase (Fragment) n=1 Tax=Symploca sp... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4190contigH-paniculata_contig4190:1134..14794 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score1041.2
Seed ortholog evalue2e-301
Seed eggNOG ortholog2880.D7G575
Preferred nameCHLH2
KEGG rclassRC01012
KEGG koko:K03403
KEGG ReactionR03877
KEGG Pathwayko00860,ko01100,ko01110,map00860,map01100,map01110
Hectar predicted targeting categoryother localisation
EggNOG free text desc.CobN/Magnesium Chelatase
EggNOG OGs2RFFJ@2759,COG1429@1
EC6.6.1.1
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons11
Model size1926
Cds size1926
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930275.5322292-CDS-H-paniculata_contig4190:1133..12971622930275.5322292-CDS-H-paniculata_contig4190:1133..1297Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4190 1134..1297 -
1691481221.0137584-CDS-H-paniculata_contig4190:1133..12971691481221.0137584-CDS-H-paniculata_contig4190:1133..1297Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4190 1134..1297 -
1622930275.5470502-CDS-H-paniculata_contig4190:3055..30991622930275.5470502-CDS-H-paniculata_contig4190:3055..3099Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4190 3056..3099 -
1691481221.0291216-CDS-H-paniculata_contig4190:3055..30991691481221.0291216-CDS-H-paniculata_contig4190:3055..3099Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4190 3056..3099 -
1622930275.5627992-CDS-H-paniculata_contig4190:3750..38481622930275.5627992-CDS-H-paniculata_contig4190:3750..3848Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4190 3751..3848 -
1691481221.0405674-CDS-H-paniculata_contig4190:3750..38481691481221.0405674-CDS-H-paniculata_contig4190:3750..3848Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4190 3751..3848 -
1622930275.575645-CDS-H-paniculata_contig4190:4383..45851622930275.575645-CDS-H-paniculata_contig4190:4383..4585Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4190 4384..4585 -
1691481221.053403-CDS-H-paniculata_contig4190:4383..45851691481221.053403-CDS-H-paniculata_contig4190:4383..4585Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4190 4384..4585 -
1622930275.5885518-CDS-H-paniculata_contig4190:5238..54621622930275.5885518-CDS-H-paniculata_contig4190:5238..5462Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4190 5239..5462 -
1691481221.063703-CDS-H-paniculata_contig4190:5238..54621691481221.063703-CDS-H-paniculata_contig4190:5238..5462Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4190 5239..5462 -
1622930275.6050634-CDS-H-paniculata_contig4190:6368..65001622930275.6050634-CDS-H-paniculata_contig4190:6368..6500Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4190 6369..6500 -
1691481221.0764456-CDS-H-paniculata_contig4190:6368..65001691481221.0764456-CDS-H-paniculata_contig4190:6368..6500Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4190 6369..6500 -
1622930275.622894-CDS-H-paniculata_contig4190:7817..80241622930275.622894-CDS-H-paniculata_contig4190:7817..8024Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4190 7818..8024 -
1691481221.092256-CDS-H-paniculata_contig4190:7817..80241691481221.092256-CDS-H-paniculata_contig4190:7817..8024Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4190 7818..8024 -
1622930275.638719-CDS-H-paniculata_contig4190:11144..113361622930275.638719-CDS-H-paniculata_contig4190:11144..11336Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4190 11145..11336 -
1691481221.1026196-CDS-H-paniculata_contig4190:11144..113361691481221.1026196-CDS-H-paniculata_contig4190:11144..11336Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4190 11145..11336 -
1622930275.656773-CDS-H-paniculata_contig4190:12884..130411622930275.656773-CDS-H-paniculata_contig4190:12884..13041Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4190 12885..13041 -
1691481221.1113255-CDS-H-paniculata_contig4190:12884..130411691481221.1113255-CDS-H-paniculata_contig4190:12884..13041Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4190 12885..13041 -
1622930275.676845-CDS-H-paniculata_contig4190:13489..138251622930275.676845-CDS-H-paniculata_contig4190:13489..13825Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4190 13490..13825 -
1691481221.123289-CDS-H-paniculata_contig4190:13489..138251691481221.123289-CDS-H-paniculata_contig4190:13489..13825Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4190 13490..13825 -
1622930275.693901-CDS-H-paniculata_contig4190:14624..147941622930275.693901-CDS-H-paniculata_contig4190:14624..14794Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4190 14625..14794 -
1691481221.1319456-CDS-H-paniculata_contig4190:14624..147941691481221.1319456-CDS-H-paniculata_contig4190:14624..14794Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4190 14625..14794 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4190.10755.1prot_H-paniculata_contig4190.10755.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig4190 1134..14794 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig4190.10755.1

>prot_H-paniculata_contig4190.10755.1 ID=prot_H-paniculata_contig4190.10755.1|Name=mRNA_H-paniculata_contig4190.10755.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=642bp
QSGKGPAGPPAPVKALLSKFGSAKEEDRLAGYLKLLKIGPSLLKFVPGKK
AKDLRSWLEIYAYWNEGGGDNVLSMFLTLGDRYLLPPGVAPPPGEVRETP
ALGLFHPSAGGYFANPREYVRWYEERQASQVEGESRRRKMAPKGSPRVAV
LLYRKHVVTRQEYISQMIRSMEADGLLPIPVFINGVEAHTVVRDLLTSSF
EQRRREEGVIDTPTLSPDCAEVDAIVNTIGFPLVGGPAGSMEAGRRVDVA
TNILSAKDVPYVVAAPLLVQDLVGWRRDGVQGLQQVVLYSLPELDGAIDT
VVLGGLVGDRIALVPERVRKLNQRLKGWIALRRTPQKDRKIAVLVYGFPP
NVGAVGTAALLNVPASLEKVLKELMAQGYDLGDLGKDLDGETLVAALKVI
SQDSVVAKGFDNLQKAVDHAGSLGEENSYRITDSRGLGGGAITGAGIPAM
DLDLYLGRTMTKRVATNWGELSRYRGVSTSGKGELVVGGLQLGNVFLGVQ
PLLGLEGDPMRLMFERDLTPHPQYAAFYEWIKADHGFGAQAVVHLGMHGT
VEWLPGSPLGNTRETWPDLLLGGADGGCGGRHGARGEAEAFAEYARELSD
YLLSLEQRLFSEGLHTLGHVPTAQEMQQYLVAYFGDQVPLEV
back to top

mRNA from alignment at H-paniculata_contig4190:1134..14794-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig4190.10755.1 ID=mRNA_H-paniculata_contig4190.10755.1|Name=mRNA_H-paniculata_contig4190.10755.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=13661bp|location=Sequence derived from alignment at H-paniculata_contig4190:1134..14794- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGTCTGGCAAAGGTCCAGCCGGCCCCCCCGCCCCTGTCAAGGCGTTACT ATCCAAGTTTGGTAGCGCTAAGGAAGAGGATCGCCTAGCGGGATACCTCA AGCTGCTCAAGATAGGCCCGAGCCTTCTGAAGTTTGTTCCGGGGAAGAAA GCGAAGGACCTTCGATCTTGGTGAGGAGTTCATGATCTGTTTTCTCTCGT TGAATTTTTTTTTTACTCGTTTTAGAAGTTGACTAGAAGGCTAGCGGGCC AATGGGCCAGTGGCTCAGACGCGTCTGCCACCTGTAGGCATTCTGAGTTC GGACCGCTTCGTGACCCTCCGTGACCCCTACCACGTTAGTGTGTTACTTC GTAGTAATAGGGTGGGGTGAGGTATTGAGTCACGCGAAAAGTTGCGGGAG AAAGTTTGACGTTCTTGTCTATGCTCACGGTTGAAGGAAGAGGGGACTAC TGTACAGTTAATTAGCTTATATAGCGGAGTGGCTTACGCTTAGGTCAGAG AAGGGTGCTGCAATGGAGCTGTAATGTTTATTTGTACGGGGGGTGCGATA TCTGGGTCGAGAGGTGCGACACGATGACTTCTGGAGATGGGACGGCACTC TTCCGTGTGTACAGGAATGTGTGCAGGAATACGTAGGAGCAAAAAAGCGA AAAAACGGTTATTGTTGCAGTGATGTCGCCGTACCTGAGGGTACGTGCGT TGCGTCTGCATTTCTTTTTTAATCCAGCTTTGCTTTCCTGCTATGCACAG CATGACCATTAGTTCTATCGCCTTACAAGGACAGCTCTAGTGCAATGCTC ATCGAAAGCGCACAACGTAAGCCTGCTTTTTGTTTGGTTATGATCGTCGT AATGTAGTAGTGTGCTTTTCCGCTTTTCTCTCTGTCTGTCTGTCTGTCTC TCTCTTATGTCCTTACGAGTTAACCCGGATCACCACCAAACGATTTTCCC TTGCGCAAAACAAAAACAGGCTGGAGATCTACGCGTACTGGAACGAAGGA GGAGGGGATAACGTTCTCAGCATGTTCCTCACCCTGGGCGACCGCTACCT CCTTCCTCCGGGAGTCGCCCCGCCTCCCGGGGAGGTTCGGGAAACCCCGG CGCTCGGGCTATTTCACCCGAGTGCGGGGGGGTACTTCGCAAATCCTCGG GAGTACGTGCGGTGGTACGAAGAACGACAGGCGTCGCAAGTGGAGGGAGA GAGTCGGAGGAGGAAGATGGCTCCGAAGGGGTCGCCGAGGGTCGCTGTGC TTTTGTATCGGAAGCACGTAGTTACTCGCCAGGAATATATCTCGCAGATG ATCAGGTATGCGATGATGAAGATTTTTTTTTGTGTGTGTCTGTGTGTTTT GTGGTGGTGGTTCGTCCTACAATAATAGGGGGGTGGGTTACAGAGGGGAG CGGGGGAGCGGGGGGTGGGTTGCCAAGAGGGTACTGCCCTCTCTTTGGGG TTGGAAAAAATTTGCTTGTGACACAAAGCGAACGTCAGCCCTATGTATCT ATTGGGAGCAAGAAACGTGGAGTGGTTGGAGAGTTGACAAGGTCAGGTGA TTAGGAAGCCGCCTTGTATCGTAGGACGATGCGATGGGTGTTCATGGTGT CCGATGTTGCCGTTGTTGTCGTCGTTGTTGTTTGGACGGGTTCGGCGCTT GGGTTTCGGTTGGTCCTTTTGACGTATCAATATCGTACAGTTATTGACAG CCTTGGTAACTCCTCCCCCCCTTCCTCCCCCCTAATGCCCCTCTGTGTTC TAGGTCAATGGAAGCGGATGGGCTGCTCCCTATACCAGTCTTCATCAACG GCGTGGAGGCGCACACGGTGGTTAGAGACCTGCTGACGTCATCGTTCGAA CAGCGCAGGAGAGAGGAAGGCGTTATTGACACGCCCACCCTGTCTCCCGA CTGTGCAGAGGTATTTGATTCTAGCAGCTCTCTTGTTCCTTGTGTGTTTA TTCGTGCGTACCTGTGTCTCTACGTTGCGAGGGATAGCGGTTGATATGTT ACGTGTTACTTGATGCATTATGATGTACTAGCAGTAGAGCCATGCCTACG CCCGTGGAGTTCGTGCTTTTCCTTGACCTGTTCATTTGCTGCGCTCGCAG TGGGGGCTCACGAAATGAACAACACTGCTAGCTGCGCGCTACGATTTTCG ATGGATGTTCGTTTTCAGGAGCTACTTGTGTACGAAGTTGGAAACTGTTC CAAAATGATTATAACCACGGCCACGATGACCTTACCTCGGTAAGTTTAAT GGATTTTTGCACTTCAGGGGCATGTGGTATACGTATTATCAACGCTGCTT TTCGTTGGAGAGGTGATGTATGGATACGTCTGAGATGGATGTGCTTCAAT AACCGATGAAGGGGTAAACGCATGACGGTTTGGATTGTGCTTGAGGTCCA CCTCGCGTCATATGGTTCGTTTTTGCTTCGATCTTATAAAGGTATTACTT GGATAAAAACAGCTGCACACGTCTAGCAATCCTTATGCAGCCCCCCCCCC CCCCGAATTTACGTTTTTGTTCTCTTGTCGGCTTGCGTAAGCCTTCCCCT CAGTTGGTTGTAAGTTGCAGATGGTTGTTTTCTTGAGTATAGTCATGATA ATGGGTTCAAGTAATGCTCTTCGATATCGCACGTCCTAGTATTATTTTCC AAACCTGATTTTCTCGAAAAGCAAGGGCCTGCGCTGCCGAAACAGCAGGT GTTACCGAAAGATCTCAACGAGATCTTCACAACAATATCGCTATTGCTGT CGTGACTGACCATCGTCGTTGTCAAGAAATCGAGTCCGAAACATAATATC AGAGGGTGCGATATTATCAAAAGGTGTTACGGTACGTTGCCTCATCTTGA CAGGTGGTTACATTAATAATATGCTATAAAAATAATGTTTGAACGTGATA ATATATGGAGTATTCACAGTCGGTATTCTGACGGTATTGGTTCAACCATC TATGAAAGGTTCATAATGTTTGTGTGACAAGAGATAACAGAAAAGAGAAG GATTCGCCGATTGGCGAGGGATTGCAAGTTGGTTGTATTTTCGTCCCGTG CTCATTGCTAGGTTATGCTGTGTCTGTTACGCACGACAAACACACATGAG TGATGCGACTGTTCTTCCTGCTGGATGTAGTGGCAGTTTTGACCTGCTGT TTTCACTCCAAGCTGCACTATCAATGTTTTCAACCCCTAGCGTTGCTATT AGTGCTTTCCATTTTCATTCCAAGCGGTGCTTTCAGTGTCGGTAATGGGG TGGGAATCGTCGATTGTATATCTTGACCACATTGTCCGCATAATTCATTC TTGAACAACCACTCGCAGCCAAACGTCCTTATCAAAATTAATCAGAATGC AGTGATTCTACGTGTTGTTCCATTCCAAGGGCCTTGCCCGCCTCCCCCCT CCCCCCCCCCTCGTTGTTCCTGTTCCTCTTTCTGTTTCCATTGTTTGCTG GTAAAAAGGTTGATGCCATAGTGAACACAATAGGGTTTCCATTGGTGGGA GGTCCCGCGGGTTCTATGGAGGCAGGAAGGCGTGTTGACGTGGCGACCAA CATCCTCTCGGCTAAGGATGTTCCGTACGTCGTGGCGGCGCCGCTACTCG TGCAGGATTTGGTGGGATGGCGGAGGGACGGCGTACAAGGGCTGCAGCAG GTGCGGTCAGGGGGGAGGGGGGGCAGGGAGAAGGGGGGTGGGGGGGGGAG CGTACTCATGTTTTGCACACCGTAGTTATTAGACGATTGACTACGCGTCC TCCGAAGGGCGGAGCTTGGGAGGCACGGAGGGGTGGTTTCTTTTTTCTGT AGTTGTGATTTAACACAATCTATAATAATTTGAGTGCATGTATCTGCTGA GGTTATCTAACCAATGATCTTGACCAGATATACACCGCACGGTGCGGGAA ACACCAATAAGGGATTGTTTCCATGCTATTCTCTGTTCACTGATGTTGTT GATATTTTGTTGTGCCAACGGTGCGCAGGTTGTGCTTCAAAAGTCTGCAA GGCCATGAACAAAAATAAGCTGTGATGCTGGAGGGCGAGCGAGATGAACA AAAATCCTTTTTTTTTTTTTTTAACGGTCTCTTTGTTTTCACGTTATTAC GCATGCTAAGTGTGCGATCCACTTGACTCGCACTTATTGGGAAGCATTCG TAAAGAGTGTTTGAAGATATGTTTTTTTAACGCAATGCAATGTACGGGGG GGGGGGGGGGGGGGGGGGATGGGAAATGCCTTGGGCTATGTGCCGTTGTC CACACGTATAGGCCGGGCCCACCAAGAAACACCAAAAATGTTCCACAGGC CAAATGTCATGATTCAAAGCGAAAACTACCACAAACGTGGGACTGCCTGT AATTGTGCAAGCACCTTGGAGTACGTCGCGCGCTCTGATCGGCCATCCGC GCTTCAAAGTGTATGACGAGACGAAAGATGGACGGACTGCCAGCGGTTAT TTTCCAATTGTGTTGGTACAAAAGTCAAGTATCTTACATTTGTGCCCGAT TCATATCCGATTGTTCTCAAAATTGTTGTGCGTATTGCTCACACCACGAC GAGAACCGTGATACCAGTTTGGGCTCCCAACTCTCCACCGTTCCAAAGCC TTGGCTAAAGTAAAATTGAGGTATAATATCTGCGCTTTCGTATAGAAGTA GGACGTACGTAATACTACACAAAACGGGCATTTCTCCCTTGTTTTTTTGG AGTTTGGATCTGAAATTTTATCAGGGTAGGTGCAAGTCAAAATTTTGGAG GCCGTAAAAGATAATATTTTTTTTCGGAAGAAAACTACGGATCTTTCAGC CATAAAATAATGAAAACGCCATTATTTTCGGTAACAAAAAAAGAATTAAA AAGGTATCACCTTTGACGATCTCCGAAATTTTGATGCGCACCTATCCTCA AAATTTCAGGTTCAAACTCCAAAAAACCAAGTGAGAAATGCCCGTGGAAT GTTTTTGGTTTCTCTTGCTGGGCCCAGCCTGTATACGTGCTTCGGGTACA AAATAATAAGAAAGCGACATACGCGCGGAAAAGTTGGACTTTCGTGTTTT GATCAACGTCGGTACAAACAGAACTAATTTTTTTTGCGTCCGCCTGCCCC CAACCGACACCTTGGTAAAAATGATATCAACCATGTTATTTTTGCCATAC AATATATTATCCCGAACGCAGCTGACTTGACTTGAGCTGGTTGCTCAGCA GTCCTCATACCTATATATTGGTCATTGGTTATTGCTGCTGCACATGGGCC TTTGAAGTCAAACTGCACAACCTCAGTGTTGCAACTACGTATGAAATTCA ATAGAGCTTGAAGAAAAATACTGCAAAAGTTAACCTATGACTCGCTCAGC ATTGCAATCTAGCTTCGGAGTGTTTCTTTCAGCCTTGAGGTATTTTTTTA AACAAAAACTCTCACATGACGCACGCGCTTGATCTGCCTTGACTGTGCTT GTTTCGTTTCAGAGCATCGCCGTGTAGTGCGAGGCCTTGTGTTGTATCCT TTTTATATGTGTCAAGATTTCGCGTTTTGATCACATTATTGGTGGGGTGT ATATTTTACCGCGCGGCACAACGTGATAAAACATCACGAGTGCAGTAAAA ATCGTGTAGGGAATGAACTACATTGGATAGCACTAAACAGTAGGTTATGG CCAATCGTAGCATACCATGCTACAACACGAGACATCCAACACGGCAGCAC ATACAGCCATACGGTATTTCCCGACAGCTCAGTCCTTCGCAATACACAGC AGAGCACAGTCAGCCATTGTATGCCAATAATCGTCTATTTGTACACTCAA GTCCTGCATACATTCAGTCAGCTGGGCGGGTCGAATGTGGGTACACTTAA TACTGTTGCAGCTATTGGGTTTCCCTGGTGTGCTGTTAGCTGGAGCTATC CTCCTCGTGGTAGGAACATAGCTTGATGAGTGTACGTCGTGTCGGGTCTT GGTACACCATATAAATCCCATAAAATTGAACTTTGCACTATTTTGCTTGT GGAGAAGTCGCTCGGCAGTATTGAAATCGCTTGAGCGTGCGTACCTTCTC TCTCTCTCTCTCTCTCTCTCTCTTTACATATATATATATATATGTAAAGA GGGAGAGAGATAGAGATATTGTCACGTTTTTCGATTCATCTATTTTTTCC TCTTCACCTGTTTTTTTTTTTTTGTCAAAACACAATTTTCTAACCGTGTC CCCCGTGTTCTAGATGCTGTCCTACTGGTGAAGGTTTCGTTGGGACCGAT TCACACCCGCGACAACTACAACGAACAATAGATAGTTGCCTACAAGTGAC TGCGGGTTGAGAAAGCTAGGGTAACCAAGTTGCCTGCAAGTAACTGCTGC CTGAGGTGTTCGACAACTAGCAATAAAGCCCCTGTTGACTGCCGAAGAAC TATCGCCGAAACAAGTATAACTGTTAAGTAGGTCAATAATCAGTTATTGT GCAGTTACTCGAGATACGCAGCACATGGCGTAGGTGTTGTTATCGCTGTC ATGGTGAAGCTGATGAGGTATAAAATTCTTGTCCCTACTTAGGTCACTGC TCTTTCTCTTGGAATTACCGCCTTTGTTTTTGACATCCCCAGAAGACTAG GGAAAGTCTTCGCTCTTTACTACTACCTACACCAGACGGTGATGCCATAG GTTTCGTATCTAGGGGTTGCTGCATGTCAGCTAGTAGATACAATGGTCCC ATAGTTTGCGTGTAATGCCCCCCCGTCTCCTGTCTTCCGCTCCCCGCAAC TAAACCGAAATCTATAACAGGTAGTCCTCTATTCCCTCCCCGAACTGGAC GGTGCGATAGACACCGTGGTGCTCGGAGGGCTTGTCGGCGACAGGATTGC CCTCGTGCCTGAGCGCGTCCGTAAGTTGAACCAGCGGCTGAAGGGGTGGA TAGCCCTTCGCCGCACGCCGCAGAAGGACAGGAAGATCGCAGTTTTGGTC TACGGGTTTCCACCCAATGTCGGCGCGGTGAGAAATCAGGGAGATGGGTG GGGCGGGGGATGTTTTCTTGGAAAGGGAGAAGAGTAACAAGCTGAATAAT GTATAGATAACAAGCTCATCAGTTTAGGTTAAATGGTGTACACTGGTGAA GTGGTCAGGAATGTTTCCAGTTTACCATTTATTTTCCCCGGTGTGTGTCA TATTCCAATGACTGCGGAAACAACAGCAGAACATGGACACGAGCGTAACA CGGATACACAGAGAAGCACACACGTAGACACCGGTACGGTCGTACACAAC ACCACATTATGTCCGACAGCATCATGTCCGATGGTGAAAGCACCGACAAC GAAAACCAAAACGATTGGAATCATGCGGGTATTGATCGCCTGGAAGGAAT GAGGCAGGGAGGAGACGTTACCACTGGTACTACCGCTCACACGAGTAACA CCACCGCTCGCACGAACAGTGCCGGCGGTGGGATTGACCCGACGGTGGCG TCGGCGGGCATAAATCCAGGAGGACAGCGACTGGGGCGGCTGACAATAGT CCTTGATGTTGCCTTCAAGAACACGGCACCTCGTATTGAAAAACGTTTTT TCCTATACAATTGACACCAGCATACTTTCCAAGTCATCAGAGATGCTGTG GAATATTCAACGAACTGGCAATGGCGACAATCGGGAGCCTTTTTATGGCC TCGCGGAAAGCTGTGCTGCTCTCCTTCCTGCCGCCTTTCCATCAAGTGGC TGTACCGTTCTGCTGTAAGCTGGTGATTCGTCGGTCGTTAATGTACCGTG GTGTATCAGTAGCAGGCGCTTGACGAAGTGCGGATATCTTGATGAGTTGA AGGATTGAACATTTGTCGATTGTGCAGCTGCCATTATCCATTGTGTGGTT TTGATTGTCATATTCCATTTGACAGGCTTGTGTACCCAGTACAGTCAGCC ACGTAAAATAATGAGATGAGCTTGGGCCTACTGTGAGGTGTGACTCCCTG AGCGACGAACAGCTGTAAGACACTACATCACGGAATAGCTTTCCCCCCTT TGAATCATCGATTTATATTTCTGTATTGATCGATATTCATTTAATTATTT TCTTTCAGTGATGTGGTATGCTTGAGCTTATGTGCGTCAAAGTATGCTGT AACGAACATGCATAGGTATGCCATTTTTACTCGAATTTCTAAAGCGGGGA CTTCAGTCACTCTTGATGTGTAACCGTGAAAAAGACGTGCAAAATGCACG TTCCTTGATTTAGAAAAAACGAACGAAAACTGTTGAATTATTCGTCGAAG GATAACTGCACAAACAAAGCAAATATATTCTGGAACATGACCAGGTGGGC ACGGCGGCCCTCCTGAACGTCCCCGCTTCTCTGGAGAAGGTCCTAAAGGA GCTCATGGCGCAAGGATATGACCTGGGAGATCTAGGGAAGGATCTCGACG GGGAGACTCTCGTGGCGGCACTCAAGGTTAGGATACAGCACCGGCCCGAT GGCACGACTTCAGCTACTATTGTCATGAGAATTTGAGCTGAAGTGTTCGC TCACCCGGTCGTCCCTTGTTAGTTCCATATATGTTGAATTTGAGAGACTC TCATATTTCAGGTTAAGCTATATATGAACACGATCCCAAGGTCCAAGTCG TTAGTGGTTTACCATAAAACCCTTTGCAGATGCGAAGGAAAATTAAGCTC GCTGTTGTACATCGCACCGGGTGCACCGATGCGCCAGTAAAGGGGGTTGG TGCTTACATGAAGGAAGTCGTTGCAACAGTGGGGATGTGATGGCGCACTG GGTGCGAACGGCAAAAATCGCTTTTTTTTTTTTTTTCAAGTTGGCATCTG GTTTGTGAAAGTTCCATGGGTTCTTCACCGTTTCCTTCGTTCTGGACGCA TCGATGCTGAGATTCCTTTTGTGTACGATGATATGATTTGGGCGGTTTTA CTACAATGATACCTTGTTGGTTGATTTCATGCAGCCGAGAGTGCCGGCTA CCCACCCCCAGCATGATACGCATATGCACTGGATATACTAGAAATTGTGA ATAGCGATCATCAGGCAAGGCCCTTTCACGTATTTTTTATTCTGCGCTGT GATAGCTAGTTTCATCATCGGGAGAGTGTTAGTCATCCGAGTCGCGTGCT TGTTGCCTGACTGAGATGGATTGGGTTCTTTTCCAGCCAGAGTAGGCATA TTCGCATTTTCACGCCCCCCTCAGTCTGTCTTCAAGGTTGCACATAATTG CACCCAGATTAGATTCCATCTGGGCTGCATAACCTCTCCGTGCGTCTTGA GAGTTTTTTGTACCCCTCGCCGTCCCCCCTCGCCGTCCCCCGCCCTCCCC GTATCCGCCTGCTGCGCGCGTCAACGCCAAAGGTTATCTCGCAAGACTCT GTGGTGGCCAAGGGCTTCGATAACCTCCAGAAGGCGGTGGACCATGCGGG ATCACTGGGAGAGGAAAACTCATATCGTATCACTGACTCGAGAGGGCTGG GTGGTGGGGCTATCACGGGCGCCGGCATTCCTGCAATGGATTTGGATTTG TATCTTGGGCGGACGATGACCAAAAGGGTGGCGACTAATTGGGGGGAATT ATCCAGGTATTGTGTCCAGCCTCTTAAATAAAGAACATTCGCCAGTATAT GTGCAGTTCTACTTCCCCCTATCCAGGAGAAAAAAGTTAAGCATGAGGAT GATCAGTAAAATACGTGAATGCTGTCCGAAATCTTGTTCTTGCAGATTGT TGTTACGGGGAAAGCTACACGAAATCAGCGTCTCGTGCAGATATTTGTTT GAAAGATGAGTAATACGAAGAAGTTCAAAATCAGATAATTGCGAGTAGCA AAAGCGTAATCTGGGCACGCTCTGTGTACTCGTGATGTGAAACCTAATCT GAACGACGTAACCTATTTATGTGCGTCATCCATGTACCCTAAACACGCAC CCTAACCGTGTACCCTATCCGTGTACCCTCGATCCGCACCCATGTAACCA CGCACATCAACCTTGTACCCAACTACGCCCCAATTGTGTACCCTTACAAT ATACCCTAGTCGTGTAACTTATACATGTACCCTCGAACTGTACCCTAGTC GTGTAGCTTGTCCATGTACCCTCGAACTGTACCCTAGTCGTGTACCCTGT CCACGTACCCTCGAACTGTACGCTAACCGTGTACCCTTTACAATATAATC TAGTCGTGTATGCTAACCAGACCCTAGCCATGACGCTAATCCTCTGGACC ATACTCTAGATATCGCGGCGTGAGCACGAGTGGAAAGGGCGAGCTGGTGG TCGGGGGGCTGCAGCTGGGGAACGTGTTTCTTGGGGTGCAGCCGCTGCTC GGGTTGGAGGGGGACCCCATGCGCCTCATGTTCGAGAGGGACCTCACGCC GCACCCTCAGTACGCTGCGTTCTACGAGTGGATCAAGGCGGACCATGGCT TCGGCGCGCAGGTGAGAGACGAGGGACGCGTGTTTCCTGTTCATTAGTGC GGCATGATAAGAGGGTGGTGATGCTTGTCCTTCCACCTTGCTCCCAATGA GTCTTTACGGGGCGTAGTGGAGCAGCGGCCGTGGCTCCAGCAGTACTGCT ACAGTCGTTGGCGTTCAAGGGTAGCCTGTGGACGAGGACTGTTTTTCTGC ATTAGCTGTACGTGAAAAAGGCTCTCGTCTGCAGATCGCCCCTGAAGAAA TACACATCTACCATCTGTAATACACAGTTCGTCCAGTTTAAGTCTGAGTA CTCAGAATTTCAAGTTAAAACCTTGGAGGTTTGTCTTGGCGTTTTTTTCC CGGATCACCTAGTTTGTGCTTTTGTCGCTTCCACCTGGGTTCGTTCAAGC TTCGCCTCTTACGTACGCTAAGTTATTCCTTTGGTAAGTTTTGTGGGTTG GTGTTTGTGTTGCGTTTCGTTTCGCTGCGTCACGTTACGTTACGTCATGT CATGTCCCTTTGTGTTACGTTTATTTTATCTGTTATCATGATCCAGGCTG TAGTTCATCTCGGGATGCACGGCACGGTGGAATGGCTGCCTGGGTCCCCA CTCGGCAACACGCGTGAGACGTGGCCCGATCTACTTTTGGGCGGGTAAGC AATGCTGTGTGTATCGTGTATATTTTACTTATATGTATATGTGAAATTTA ATGTGAACCGAGATGGGAGAAAGTAGGAGTTGATCGATCCTTGTTGGACA ACGCAAGTCTTTCAAATCATAGCACCGACATTCCACCGCTCCGTTCTTGT TTCTCCGTTTGCCTCGTGGTTGCTTACGTCACGTTGCAGGATGCCGAACG TCTACGTGTACGCTGCCAATAACCCCTCCGAGTCGATCCTGGCCAAACGG CGAGGCTACGGCACCATCATCAGCCACAACGTGAGGAGACAACGTCCATC CATACCCATGTTTGAATTAGTGCATAAAAACGTATGCATGTAGTGTTCAT GTGGTCGTGCAAATTGTAATTACGGCTATTTTATCGCCCGGCACTATTTT ACATAATAGATACATTGAAGTGTATAAAGCTCTTCATTTATTTATTTTTT TTCCGTAGGTTCCACCGTACGCGCGGGCGGGATTGTACAAGCAACTGTCC ACCCTGAAGGAGCTCGTCCGCGAATTCCGAGAGGACACGGTGAAAAACGC CTCCCTCCGGCCTGTCATCGCGGCTCAGCTGCAGCAGGCGGGTCTGTACG AGGACTTGCCCTACCGCCTTGGGAAGGCGGGCACCGAGGACGGAGTGCTG ACGGCGGATGCGGCGGAAGACATGGAGCTCGAGGGGAAGGTAGGTATCTT TATTAAATGGCAAGATTGAAGCCTTTTAGCGTCGGTTTCCCTCTGTTCCC TGTATATTATCCTTGCCCTCCGAAGCAGGGAAGAACGATGCCTATGACAT GACATGACTTCGGGGATAGGGAGCCGCCGGCGTTCAGATAGACAAACAGT TCAGCACTGAAAGTATAAAGACAGATATTATTGTTGGCATGATCTCTGTC CACAATGAATGCAGCCCTCCACTTTTTTTATTTTTTATTTTTTTTATTTG TTTTATGTATGCTTATTTATTCCGAAACAAACCTCCTTGAAGACGCTGAA GGGATTATTACGGTGAGTGGTGGTGGTTTTCGTCGTCGTAATTGTCATCT TGGTAGATTCGAAACATATTTTCAATTTTTTGTCGAAGAAAATGGTGAAA ACTGAACCTTGGCGCTAGTGTATGTGGCGAGCGTAGCGAGCCGTTGTGCA TGGGTCATGGGTTCTGGATAATGACTGCATGAATACGAGGACGAAGCATG CACGGACTGGCCCGGCGTACATAGATGTGGCCAGACTCTGCTGTTATTGT TTTCGGCGCCGCTCTTTCTCCACAGAATCTCCACCGAACCCCGGCCTGAA GGAAACTGTGATGTGAATGCGCGGGGATAGGGAGTCGCCGTTGTTAAGAC GACCAATCCAGCACGGACAGTACATGCAGCAAAATTCAGGGAGCTGTAGT GTCATGGTTCTACATGCAACACACAACACGATTGCAGCACCGCTCATATT TAGGGTTGGATTCGGTTGTTGATCCGAAACGACCTCAGGCACTTCCAAGA GGTCAGAGTCAATTCAAGCGAAGTGGTAATAGACCGTTCCCTCCAAATTT CTTCTGACGGAGATTTCACAGTTGTCCAAGTCAAGCAGCAAAAGTTGGAA GTATTTGTCCAAACCGGTGATACTGTAATAAATGCCAAGGTATTGTCTGC ACGACAGGGTTGTTGTCAGTTTTCGATTTCATCACCGAGTTTTGCAGCTT ACATTAATTGCATAAACTGCTCTAGTTCAGAAAGGTGGCCTGTTTTTCAT GGGTGATGTTAGTGGTCGACCTATTTTTTATTCAGATACTTCAAGGAGGG CATGTGTGTTGATAAGACAGCGGCCATTGAGGTCGTCCCTTTGGGGCCAA TCAAGACCTGAATTTTGCTCAGGACATATGCCAAGTTAGGTTCGGGGTAT GGTCATTCAGCCGGTCGAACTCACAAACTATGTAGTTCGGGCTCTGCCTT AATGGAAGTATCACGATACGTTTCATCGTGGCATTGTCGTTAGGTGTTGT TATACCCCGCGCTGTTGTTTTTTCGGTGCTCGTGTTTTCGCCTATCCCCG TTGTATACATTATCCTGCTCTTTTTATTTTTGCACTCTTCATATTACCCC GCGTTGCTGTAGACCTTGTGCGAGCACGTTTCACTCAGTCTTGTCCTGTT TCAATCGCACCACATTTATTCCATTTTTTCCCACAATTTTTTCCTCTCCT TGTCCTACATTTTCTCGAACCACATCTACCCTGCCACGTTTGTCAGTTAT TGCTATCACATTACCCCTCGCTTTTTCCTACGTATTATGTTATCACATTT GCGGTACCCGGGCCTTATACCATTTTCTTGAACCACATTCACCCCGCTAG TCCTTCAAGATTTGTTTTGACCAACTTAAGGCCGCCCCTGCGCGGCTGGC TGGTCCTCCCTCCTCCCCCGCAACGCATGCACACACGCGACAGGAAGCTG AGGCGTTTGCGGAATATGCCCGCGAGCTGTCGGACTACCTCCTCTCGCTG GAGCAGCGCCTGTTCAGCGAAGGGCTTCACACGCTTGGACACGTGCCAAC GGCGCAAGAGATGCAACAGTACCTCGTGGCGTACTTCGGGGACCAGGTAC CGCTGGAGGTG
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig4190:1134..14794-

>mRNA_H-paniculata_contig4190.10755.1 ID=mRNA_H-paniculata_contig4190.10755.1|Name=mRNA_H-paniculata_contig4190.10755.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3852bp|location=Sequence derived from alignment at H-paniculata_contig4190:1134..14794- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGTCTGGCAAAGGTCCAGCCGGCCCCCCCGCCCCTGTCAAGGCGTTACT
ATCCAAGTTTGGTAGCGCTAAGGAAGAGGATCGCCTAGCGGGATACCTCA
AGCTGCTCAAGATAGGCCCGAGCCTTCTGAAGTTTGTTCCGGGGAAGAAA
GCGAAGGACCTTCGATCTTGCAGTCTGGCAAAGGTCCAGCCGGCCCCCCC
GCCCCTGTCAAGGCGTTACTATCCAAGTTTGGTAGCGCTAAGGAAGAGGA
TCGCCTAGCGGGATACCTCAAGCTGCTCAAGATAGGCCCGAGCCTTCTGA
AGTTTGTTCCGGGGAAGAAAGCGAAGGACCTTCGATCTTGGCTGGAGATC
TACGCGTACTGGAACGAAGGAGGAGGGGATAACGTTCTCAGCATGTTCCT
CACCCTGGGCGACCGCTACCTCCTTCCTCCGGGAGTCGCCCCGCCTCCCG
GGGAGGTTCGGGAAACCCCGGCGCTCGGGCTATTTCACCCGAGTGCGGGG
GGGTACTTCGCAAATCCTCGGGAGTACGTGCGGTGGTACGAAGAACGACA
GGCGTCGCAAGTGGAGGGAGAGAGTCGGAGGAGGAAGATGGCTCCGAAGG
GGTCGCCGAGGGTCGCTGTGCTTTTGTATCGGAAGCACGTAGTTACTCGC
CAGGAATATATCTCGCAGATGATCAGGCTGGAGATCTACGCGTACTGGAA
CGAAGGAGGAGGGGATAACGTTCTCAGCATGTTCCTCACCCTGGGCGACC
GCTACCTCCTTCCTCCGGGAGTCGCCCCGCCTCCCGGGGAGGTTCGGGAA
ACCCCGGCGCTCGGGCTATTTCACCCGAGTGCGGGGGGGTACTTCGCAAA
TCCTCGGGAGTACGTGCGGTGGTACGAAGAACGACAGGCGTCGCAAGTGG
AGGGAGAGAGTCGGAGGAGGAAGATGGCTCCGAAGGGGTCGCCGAGGGTC
GCTGTGCTTTTGTATCGGAAGCACGTAGTTACTCGCCAGGAATATATCTC
GCAGATGATCAGGTCAATGGAAGCGGATGGGCTGCTCCCTATACCAGTCT
TCATCAACGGCGTGGAGGCGCACACGGTGGTTAGAGACCTGCTGACGTCA
TCGTTCGAACAGCGCAGGAGAGAGGAAGGCGTTATTGACACGCCCACCCT
GTCTCCCGACTGTGCAGAGGTCAATGGAAGCGGATGGGCTGCTCCCTATA
CCAGTCTTCATCAACGGCGTGGAGGCGCACACGGTGGTTAGAGACCTGCT
GACGTCATCGTTCGAACAGCGCAGGAGAGAGGAAGGCGTTATTGACACGC
CCACCCTGTCTCCCGACTGTGCAGAGGTTGATGCCATAGTGAACACAATA
GGGTTTCCATTGGTGGGAGGTCCCGCGGGTTCTATGGAGGCAGGAAGGCG
TGTTGACGTGGCGACCAACATCCTCTCGGCTAAGGATGTTCCGTACGTCG
TGGCGGCGCCGCTACTCGTGCAGGATTTGGTGGGATGGCGGAGGGACGGC
GTACAAGGGCTGCAGCAGGTTGATGCCATAGTGAACACAATAGGGTTTCC
ATTGGTGGGAGGTCCCGCGGGTTCTATGGAGGCAGGAAGGCGTGTTGACG
TGGCGACCAACATCCTCTCGGCTAAGGATGTTCCGTACGTCGTGGCGGCG
CCGCTACTCGTGCAGGATTTGGTGGGATGGCGGAGGGACGGCGTACAAGG
GCTGCAGCAGGTAGTCCTCTATTCCCTCCCCGAACTGGACGGTGCGATAG
ACACCGTGGTGCTCGGAGGGCTTGTCGGCGACAGGATTGCCCTCGTGCCT
GAGCGCGTCCGTAAGTTGAACCAGCGGCTGAAGGGGTGGATAGCCCTTCG
CCGCACGCCGCAGAAGGACAGGAAGATCGCAGTTTTGGTCTACGGGTTTC
CACCCAATGTCGGCGCGGTAGTCCTCTATTCCCTCCCCGAACTGGACGGT
GCGATAGACACCGTGGTGCTCGGAGGGCTTGTCGGCGACAGGATTGCCCT
CGTGCCTGAGCGCGTCCGTAAGTTGAACCAGCGGCTGAAGGGGTGGATAG
CCCTTCGCCGCACGCCGCAGAAGGACAGGAAGATCGCAGTTTTGGTCTAC
GGGTTTCCACCCAATGTCGGCGCGGTGGGCACGGCGGCCCTCCTGAACGT
CCCCGCTTCTCTGGAGAAGGTCCTAAAGGAGCTCATGGCGCAAGGATATG
ACCTGGGAGATCTAGGGAAGGATCTCGACGGGGAGACTCTCGTGGCGGCA
CTCAAGGTGGGCACGGCGGCCCTCCTGAACGTCCCCGCTTCTCTGGAGAA
GGTCCTAAAGGAGCTCATGGCGCAAGGATATGACCTGGGAGATCTAGGGA
AGGATCTCGACGGGGAGACTCTCGTGGCGGCACTCAAGGTTATCTCGCAA
GACTCTGTGGTGGCCAAGGGCTTCGATAACCTCCAGAAGGCGGTGGACCA
TGCGGGATCACTGGGAGAGGAAAACTCATATCGTATCACTGACTCGAGAG
GGCTGGGTGGTGGGGCTATCACGGGCGCCGGCATTCCTGCAATGGATTTG
GATTTGTATCTTGGGCGGACGATGACCAAAAGGGTGGCGACTAATTGGGG
GGAATTATCCAGGTTATCTCGCAAGACTCTGTGGTGGCCAAGGGCTTCGA
TAACCTCCAGAAGGCGGTGGACCATGCGGGATCACTGGGAGAGGAAAACT
CATATCGTATCACTGACTCGAGAGGGCTGGGTGGTGGGGCTATCACGGGC
GCCGGCATTCCTGCAATGGATTTGGATTTGTATCTTGGGCGGACGATGAC
CAAAAGGGTGGCGACTAATTGGGGGGAATTATCCAGATATCGCGGCGTGA
GCACGAGTGGAAAGGGCGAGCTGGTGGTCGGGGGGCTGCAGCTGGGGAAC
GTGTTTCTTGGGGTGCAGCCGCTGCTCGGGTTGGAGGGGGACCCCATGCG
CCTCATGTTCGAGAGGGACCTCACGCCGCACCCTCAGTACGCTGCGTTCT
ACGAGTGGATCAAGGCGGACCATGGCTTCGGCGCGCAGATATCGCGGCGT
GAGCACGAGTGGAAAGGGCGAGCTGGTGGTCGGGGGGCTGCAGCTGGGGA
ACGTGTTTCTTGGGGTGCAGCCGCTGCTCGGGTTGGAGGGGGACCCCATG
CGCCTCATGTTCGAGAGGGACCTCACGCCGCACCCTCAGTACGCTGCGTT
CTACGAGTGGATCAAGGCGGACCATGGCTTCGGCGCGCAGGCTGTAGTTC
ATCTCGGGATGCACGGCACGGTGGAATGGCTGCCTGGGTCCCCACTCGGC
AACACGCGTGAGACGTGGCCCGATCTACTTTTGGGCGGGCTGTAGTTCAT
CTCGGGATGCACGGCACGGTGGAATGGCTGCCTGGGTCCCCACTCGGCAA
CACGCGTGAGACGTGGCCCGATCTACTTTTGGGCGGTGCTGACGGCGGAT
GCGGCGGAAGACATGGAGCTCGAGGGGAAGTGCTGACGGCGGATGCGGCG
GAAGACATGGAGCTCGAGGGGAAGCTGAGGCGTTTGCGGAATATGCCCGC
GAGCTGTCGGACTACCTCCTCTCGCTGGAGCAGCGCCTGTTCAGCGAAGG
GCTTCACACGCTTGGACACGTGCCAACGGCGCAAGAGATGCAACAGTACC
TCGTGGCGTACTTCGGGGACCAGGTACCGCTGGAGGTGCTGAGGCGTTTG
CGGAATATGCCCGCGAGCTGTCGGACTACCTCCTCTCGCTGGAGCAGCGC
CTGTTCAGCGAAGGGCTTCACACGCTTGGACACGTGCCAACGGCGCAAGA
GATGCAACAGTACCTCGTGGCGTACTTCGGGGACCAGGTACCGCTGGAGG
TG
back to top