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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Model size | 2296 |
| Cds size | 1452 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4185.10746.1 >prot_H-paniculata_contig4185.10746.1 ID=prot_H-paniculata_contig4185.10746.1|Name=mRNA_H-paniculata_contig4185.10746.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=484bp
MRAPTLSPPVSPPSPPGGRDEGEVSSMYGGAMAEVAGRIAPSRFGASVTP
TQKPSTSTGSPRQERVGSPTRTGDDDGRTTPGRQGVQSALSGRGAGRESG
GSVDHRRDNARTTEARASRLGGEVRVPRVQQEADPGWDADSEGSPPFAKA
PGARIGGQPNAQLPVSVPRRERTNNVVRFSGEVALGAEASSGEEAPATGI
GGLESTAVYASAATAMSVGVSQKADERPPEADCSVNPPTRTPTAMIDATA
VAETTPGQAEVPGRRGVEAAAAYRATEASSAAVRGAEAKESMTEIRETGR
TRASSPVSVAAADGAVPPSEDSDPWRKADDILQERKTHEVAWQGFEEANK
NTVATDNAAAGGPIPAIGSTSSVGALGHPDNDTHVRLRDAAANELKKTEE
KRRSASYGNAYPTAEELGRRGDDERRIDGGKTLLSWRENLGMTGPAAASL
VGEVMRADGDSSVGSPVSRLRRSSGIGDVGGLST back to topmRNA from alignment at H-paniculata_contig4185:788..5228+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig4185.10746.1 ID=mRNA_H-paniculata_contig4185.10746.1|Name=mRNA_H-paniculata_contig4185.10746.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4441bp|location=Sequence derived from alignment at H-paniculata_contig4185:788..5228+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGAAATGCGCCGAGACAGACAGGGTAAAGTCTACGGAGATTTACCCCTTC
ACCGGAGGGCGCAGAAAAATGCAGGGAGAATGTCAGCTGCAGCCACAGAC
GAGGCGTATGTAGGAGGCCCCGCAACGTTGGCTCGGGCGGACAAGGTCAG
TCGTTCTGTCTTGCATCTGAAACGCACCCCAGAGTTACGGCCCGCTAGTA
AATAAGAAATAGATCACAGTAAGGAACTCAGACTCATTTTTTCGAATTTT
CGATTTTGCGACTTTGTGATTTTGCGATTTACAAAAAAACATGTAAAAAT
AAATTGAGCTCAACCTGCGGTCGCATATGCTGTAATTATGTCGCATCTTA
TGCGCGTTGGAAACTTGATTTTGTCTTGAAGAATAAAAACCAAGCATTTC
CTCCGATCATGTTGCAAAGACAATGGTGACATAGATCGAAAAATTACTTG
TGTTTTAAACATCTCTACAACAAAAAAGCGTGTGAAAAACGAAATACACC
CCAGTTTCCGAGGCAGCTGCTCGACTTTGATTTTTTTTTTTTTTTTCATA
CTTTGGCAATTTTTTTTTTCTTCGAAAACTTAACGCCTGAAAAATCGGCA
TAATTGGACTAAAATTCCCTTTCAGTGAGATAATGAATAAATTTCTCTCG
AGGTATGTGTGGCATGTGATATCAAATAGCTGACCATATCTCCCCGAGAC
AAGAACAAAACGTGGGGAAACGTCCAACATTCAAGTTTTCCGACAGTTTG
TTTCGACGCGCAAATTACATAAGATGCGGACTTGGCCGCTACATACCAAT
ATATTACAGTTTCGAACCTCACCCTAGAATTTGGGTTTTCTCAGCAATGG
TAGTAGCGGGTTAAGACTGTTGCTCACATCCATCCATTGGCACGGTCGGT
AAGTTACTTCTGGATTCTCTTGGTAGAATATCTCGGAAAGCGGACTGTAT
GCTCCTCCCCACATACGGTAGAGCTATCCGTGTGTTTTGTTCCAATACGG
TAAGGTGGTGGTGGTGGTGGTGATTTCGTTTTTTTTGTTTTTTTTCCAAT
TCTATATTCAATTGACCACTTAAAAGCGAATCTCATTGTGAGCGTAGCGA
GGCAGTGCGAGTGCAGCGAGCAGTGCCTATTGTTCGCTATGTATGCGAGT
GAGCGCCCACTGTGAGCGCAACAAGACCGTGGTTCGAGGACACGTTCGAG
CTGCACGGGTTAGCGTAGACGTGGCTCCATTACTAGTGAGGAAATTCATG
TGTTACTCTTGTCAATTCATATGTTACTCTTGTAATCTAGGTTGTGGTAC
CCATCCCCGTTCCTCACTGGAATAAGTACAGTATGGCATATGTCTGTGGC
ACACCATGTTATCATGTGTGTCCCCAAACCTAGCTGAACCCGCGTCCTGA
CGATATCCTATCTGCACTCGCTTGGGTCATGTCTCCTATATATTTGCCTT
CTTGTTTTACTTGCAGGCGGAGAAATTAGTTTTCTCTACTTTTTGTGCCC
TCTTGTGTACCGTACTGGACGAACCCCATTTCTCTACGAGGGGCGCCGAA
TGAATGTTTAGCAAGATGTGAACGTTAATTTTTTTTTCAAATTTTGTCAA
GAGTAAAGAGTCGAAGCCTCCATCGAAAATTAGGCTTTCTTTTTTTTCCT
TTTTGTTTTTCAAAATACATATTTACTTCTTGGTCGTAACGAGTGATATT
ACATGTCCGACAGATCTTCTCTATAAAAAAAACAACCTCGCTTGCTCTCC
CCCCTTGCGACGTCCAGCCATTAAACATGAAGGTGGAAAACGCACAATTG
CGAGAGTGGCCCGGCTGGTGGCCGACCCCTCCTCCTCAATCCGCCCGCAC
CACCGCCACCGCCGCCGCCCCCGCCGGCAAAGCCGCCGTTTCTCACCCTT
CTTCGCGGTGCCCCACGGGCGAAACCATACCGACGGAAGGCGAGCGCCTG
CAGCTTATCGAACACGCGAGACGCGGCCTTCTGGACTCCGTTTTGCGCGC
CGAAGATCAAGGAAGTGGTCGCGCCGATAGCTCTACAGTTGGCATCCACC
CTCCCCCCCCCGCCGTCGCTGCCGCTGTTGCTGCTAGTGCTTCTGGCGAC
AGCGCGAATGTTGATATTAACGGAGGGAGTGGGGGGGGCGGGCACGGAGA
ACGCACCGATGGTGCCGATCAGGTGGGGTTGTTGCCCTCTGCCGTCCGTC
ATGGGCAATCCACCACGCCCCCAGGTGCTGTTGCAGTTGGCAGGGCTACT
TCTTCCGCCACTGGTCAGTCGGCTGCCGCCGCAGCCGCTACAGGATTCGT
GAGCGCGGGTCCAATTGGTTGTGGTGGTCCGGGCGTCGCGTCGCCGTGGC
TTCCTATCGCCGACGGTGGTCGCTGGGGAATTGAACCAATCAGGACCGAT
GGTCCTGCCGCTGTCGCCGCCGCCGCCACTGCTGCTGCTGCTGCAGGTGG
CAGCGGCGGTGGAGCTGAACTTACCCCTGTTGACCAAAATCTGGGTGCGG
CAATGCGCGCCCCCACGCTGTCACCACCAGTATCACCACCATCACCACCA
GGTGGACGTGACGAGGGGGAGGTGTCGTCCATGTATGGCGGCGCAATGGC
TGAGGTGGCGGGAAGGATAGCGCCGTCGCGCTTTGGCGCCTCCGTCACCC
CTACGCAGAAGCCTTCTACGTCCACCGGCTCACCTCGCCAGGAGCGCGTC
GGTAGTCCGACAAGAACGGGAGATGATGATGGCCGAACGACGCCGGGACG
GCAGGGCGTTCAGTCGGCGCTGTCGGGGAGGGGAGCAGGGCGAGAGTCAG
GTGGAAGTGTTGATCATCGAAGGGATAACGCCCGGACAACGGAGGCGCGG
GCGAGCAGATTGGGTGGAGAGGTGCGGGTACCTCGTGTACAGCAGGTATT
TGCCGCGCGTACCGCATGAGTTCGTTCCGGGGGGAGGAGCGGAGGAGTGT
GGCCGGAGTCGGATGGGATTTTTGGATTCATGAGGCGTGGTCCCCGATTG
CACAGACCGCAGTACTTGAGAGAGAATTTGATCTTGCGGTACGGGAGATG
TGTGTGGCACCACCTGGTATATATTGCTCGGTCTAGAATACGCAGTAAAG
TAGTTTATTTTGAGTGAAGCATTACCTATGATTCTTCGACTACTCGGATA
GACATCACTATACTGCGAAGTGTATGACCGATATGCCATACGTCGCTTGG
GCTTGAGGGTGCTGTCCGTCCCGTATACCTGGTAGAATAAACGGTTGACG
TCAGTTGTTTCAATTTCGCTGATGAGTGTATCTAGAGATAGTATTTAACC
ATTATTGTGGCCTAAACATCCCCCCCCGCCTTCCCCTGTCGCCGGGCCCA
ACCCCGCTCCCTCCCCTCTCCAACTTCCCAAGGAGGCTGACCCTGGGTGG
GACGCAGACTCGGAAGGTTCGCCACCCTTCGCCAAGGCACCAGGCGCCAG
GATCGGTGGTCAACCCAATGCGCAGCTACCGGTCTCTGTTCCCCGGCGGG
AGAGGACAAACAACGTCGTGCGCTTTTCGGGAGAAGTGGCGTTGGGCGCC
GAAGCATCATCAGGCGAAGAAGCGCCGGCAACAGGAATCGGGGGGCTGGA
ATCCACTGCAGTGTATGCTTCGGCGGCAACCGCGATGTCGGTAGGGGTAT
CACAGAAAGCAGACGAACGGCCGCCAGAAGCAGATTGTAGCGTGAATCCA
CCGACGAGGACGCCTACAGCGATGATTGATGCGACTGCTGTTGCGGAAAC
AACGCCGGGGCAAGCGGAGGTTCCCGGCCGAAGGGGGGTGGAAGCCGCGG
CGGCATACCGGGCGACCGAGGCATCGTCGGCCGCCGTCCGGGGTGCGGAG
GCCAAGGAAAGTATGACAGAGATTCGCGAGACGGGGCGAACTCGTGCTTC
TTCTCCCGTGTCGGTGGCTGCTGCTGATGGCGCGGTACCACCCTCCGAGG
ATTCGGACCCATGGCGAAAAGCCGACGATATCCTGCAGGAGAGGAAAACG
CACGAGGTCGCCTGGCAGGGTTTCGAAGAAGCTAACAAAAACACTGTCGC
CACCGACAACGCTGCCGCCGGCGGTCCTATCCCCGCCATCGGTAGCACAT
CCTCGGTCGGCGCTCTGGGGCACCCCGACAACGATACCCACGTACGTCTT
CGCGATGCTGCCGCTAACGAGCTGAAGAAAACAGAAGAAAAACGCCGTAG
CGCATCGTACGGCAACGCTTACCCGACTGCGGAAGAGCTAGGGCGACGCG
GGGACGATGAAAGACGGATAGATGGAGGCAAGACACTGCTTAGTTGGCGC
GAGAACCTCGGAATGACAGGACCTGCTGCCGCCTCGCTGGTAGGAGAGGT
AATGCGCGCAGATGGGGACAGTTCTGTCGGATCCCCGGTATCGAGACTCC
GAAGGAGTAGTGGGATTGGAGACGTTGGGGGGCTGTCTACG back to topCoding sequence (CDS) from alignment at H-paniculata_contig4185:788..5228+ >mRNA_H-paniculata_contig4185.10746.1 ID=mRNA_H-paniculata_contig4185.10746.1|Name=mRNA_H-paniculata_contig4185.10746.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2904bp|location=Sequence derived from alignment at H-paniculata_contig4185:788..5228+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCGCGCCCCCACGCTGTCACCACCAGTATCACCACCATCACCACCAGG
TGGACGTGACGAGGGGGAGGTGTCGTCCATGTATGGCGGCGCAATGGCTG
AGGTGGCGGGAAGGATAGCGCCGTCGCGCTTTGGCGCCTCCGTCACCCCT
ACGCAGAAGCCTTCTACGTCCACCGGCTCACCTCGCCAGGAGCGCGTCGG
TAGTCCGACAAGAACGGGAGATGATGATGGCCGAACGACGCCGGGACGGC
AGGGCGTTCAGTCGGCGCTGTCGGGGAGGGGAGCAGGGCGAGAGTCAGGT
GGAAGTGTTGATCATCGAAGGGATAACGCCCGGACAACGGAGGCGCGGGC
GAGCAGATTGGGTGGAGAGGTGCGGGTACCTCGTGTACAGCAGATGCGCG
CCCCCACGCTGTCACCACCAGTATCACCACCATCACCACCAGGTGGACGT
GACGAGGGGGAGGTGTCGTCCATGTATGGCGGCGCAATGGCTGAGGTGGC
GGGAAGGATAGCGCCGTCGCGCTTTGGCGCCTCCGTCACCCCTACGCAGA
AGCCTTCTACGTCCACCGGCTCACCTCGCCAGGAGCGCGTCGGTAGTCCG
ACAAGAACGGGAGATGATGATGGCCGAACGACGCCGGGACGGCAGGGCGT
TCAGTCGGCGCTGTCGGGGAGGGGAGCAGGGCGAGAGTCAGGTGGAAGTG
TTGATCATCGAAGGGATAACGCCCGGACAACGGAGGCGCGGGCGAGCAGA
TTGGGTGGAGAGGTGCGGGTACCTCGTGTACAGCAGGAGGCTGACCCTGG
GTGGGACGCAGACTCGGAAGGTTCGCCACCCTTCGCCAAGGCACCAGGCG
CCAGGATCGGTGGTCAACCCAATGCGCAGCTACCGGTCTCTGTTCCCCGG
CGGGAGAGGACAAACAACGTCGTGCGCTTTTCGGGAGAAGTGGCGTTGGG
CGCCGAAGCATCATCAGGCGAAGAAGCGCCGGCAACAGGAATCGGGGGGC
TGGAATCCACTGCAGTGTATGCTTCGGCGGCAACCGCGATGTCGGTAGGG
GTATCACAGAAAGCAGACGAACGGCCGCCAGAAGCAGATTGTAGCGTGAA
TCCACCGACGAGGACGCCTACAGCGATGATTGATGCGACTGCTGTTGCGG
AAACAACGCCGGGGCAAGCGGAGGTTCCCGGCCGAAGGGGGGTGGAAGCC
GCGGCGGCATACCGGGCGACCGAGGCATCGTCGGCCGCCGTCCGGGGTGC
GGAGGCCAAGGAAAGTATGACAGAGATTCGCGAGACGGGGCGAACTCGTG
CTTCTTCTCCCGTGTCGGTGGCTGCTGCTGATGGCGCGGTACCACCCTCC
GAGGATTCGGACCCATGGCGAAAAGCCGACGATATCCTGCAGGAGAGGAA
AACGCACGAGGTCGCCTGGCAGGGTTTCGAAGAAGCTAACAAAAACACTG
TCGCCACCGACAACGCTGCCGCCGGCGGTCCTATCCCCGCCATCGGTAGC
ACATCCTCGGTCGGCGCTCTGGGGCACCCCGACAACGATACCCACGTACG
TCTTCGCGATGCTGCCGCTAACGAGCTGAAGAAAACAGAAGAAAAACGCC
GTAGCGCATCGTACGGCAACGCTTACCCGACTGCGGAAGAGCTAGGGCGA
CGCGGGGACGATGAAAGACGGATAGATGGAGGCAAGACACTGCTTAGTTG
GCGCGAGAACCTCGGAATGACAGGACCTGCTGCCGCCTCGCTGGTAGGAG
AGGTAATGCGCGCAGATGGGGACAGTTCTGTCGGATCCCCGGTATCGAGA
CTCCGAAGGAGTAGTGGGATTGGAGACGTTGGGGGGCTGTCTACGGAGGC
TGACCCTGGGTGGGACGCAGACTCGGAAGGTTCGCCACCCTTCGCCAAGG
CACCAGGCGCCAGGATCGGTGGTCAACCCAATGCGCAGCTACCGGTCTCT
GTTCCCCGGCGGGAGAGGACAAACAACGTCGTGCGCTTTTCGGGAGAAGT
GGCGTTGGGCGCCGAAGCATCATCAGGCGAAGAAGCGCCGGCAACAGGAA
TCGGGGGGCTGGAATCCACTGCAGTGTATGCTTCGGCGGCAACCGCGATG
TCGGTAGGGGTATCACAGAAAGCAGACGAACGGCCGCCAGAAGCAGATTG
TAGCGTGAATCCACCGACGAGGACGCCTACAGCGATGATTGATGCGACTG
CTGTTGCGGAAACAACGCCGGGGCAAGCGGAGGTTCCCGGCCGAAGGGGG
GTGGAAGCCGCGGCGGCATACCGGGCGACCGAGGCATCGTCGGCCGCCGT
CCGGGGTGCGGAGGCCAAGGAAAGTATGACAGAGATTCGCGAGACGGGGC
GAACTCGTGCTTCTTCTCCCGTGTCGGTGGCTGCTGCTGATGGCGCGGTA
CCACCCTCCGAGGATTCGGACCCATGGCGAAAAGCCGACGATATCCTGCA
GGAGAGGAAAACGCACGAGGTCGCCTGGCAGGGTTTCGAAGAAGCTAACA
AAAACACTGTCGCCACCGACAACGCTGCCGCCGGCGGTCCTATCCCCGCC
ATCGGTAGCACATCCTCGGTCGGCGCTCTGGGGCACCCCGACAACGATAC
CCACGTACGTCTTCGCGATGCTGCCGCTAACGAGCTGAAGAAAACAGAAG
AAAAACGCCGTAGCGCATCGTACGGCAACGCTTACCCGACTGCGGAAGAG
CTAGGGCGACGCGGGGACGATGAAAGACGGATAGATGGAGGCAAGACACT
GCTTAGTTGGCGCGAGAACCTCGGAATGACAGGACCTGCTGCCGCCTCGC
TGGTAGGAGAGGTAATGCGCGCAGATGGGGACAGTTCTGTCGGATCCCCG
GTATCGAGACTCCGAAGGAGTAGTGGGATTGGAGACGTTGGGGGGCTGTC
TACG back to top
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