mRNA_H-paniculata_contig41834.10741.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig41834.10741.1 vs. uniprot
Match: A0A5K1JYL8_9APHY (Isocitrate lyase (ICL) (Isocitrase) (Isocitratase) (MICA) -isocitrate glyoxylate-lyase))) (Fragment) n=1 Tax=Ganoderma boninense TaxID=34458 RepID=A0A5K1JYL8_9APHY) HSP 1 Score: 61.6 bits (148), Expect = 3.710e-10 Identity = 31/56 (55.36%), Postives = 40/56 (71.43%), Query Frame = 1
Query: 1 DNQGAEKMARNKHTSRRTRHIDVKHHIVRDAVEVGKVDVAYVGTGKQHSDVLTKAL 168
DNQ A +A+N RT+HI V+HH +RD +E G++ VAYV TG Q +DVLTKAL
Sbjct: 130 DNQSAMALAKNSEFHDRTKHIAVRHHFIRDEIEEGRIRVAYVPTGDQVADVLTKAL 185
BLAST of mRNA_H-paniculata_contig41834.10741.1 vs. uniprot
Match: UPI001CC20AEF (Ty1/Copia family ribonuclease HI n=1 Tax=Pseudomonas aeruginosa TaxID=287 RepID=UPI001CC20AEF) HSP 1 Score: 58.5 bits (140), Expect = 8.430e-10 Identity = 28/56 (50.00%), Postives = 39/56 (69.64%), Query Frame = 1
Query: 1 DNQGAEKMARNKHTSRRTRHIDVKHHIVRDAVEVGKVDVAYVGTGKQHSDVLTKAL 168
DNQGA K+A+++ RT+HIDV+HH VRD E +D+ Y+ T K +D+LTK L
Sbjct: 27 DNQGAMKLAQSRSYHSRTKHIDVRHHFVRDMCEQSVIDLKYLSTDKMPADILTKGL 82
BLAST of mRNA_H-paniculata_contig41834.10741.1 vs. uniprot
Match: A0A0L7QKC3_9HYME (Copia protein n=1 Tax=Habropoda laboriosa TaxID=597456 RepID=A0A0L7QKC3_9HYME) HSP 1 Score: 58.2 bits (139), Expect = 1.570e-9 Identity = 30/56 (53.57%), Postives = 39/56 (69.64%), Query Frame = 1
Query: 1 DNQGAEKMARNKHTSRRTRHIDVKHHIVRDAVEVGKVDVAYVGTGKQHSDVLTKAL 168
DNQGA K+A N RT+HIDV+HH VRDA+ +++ YV TG+ +DVLTK L
Sbjct: 33 DNQGAIKLAENPVFHNRTKHIDVRHHFVRDALRDKAIELKYVPTGEMVADVLTKGL 88
BLAST of mRNA_H-paniculata_contig41834.10741.1 vs. uniprot
Match: A0A8D8LBR2_9HEMI (Copia protein n=1 Tax=Cacopsylla melanoneura TaxID=428564 RepID=A0A8D8LBR2_9HEMI) HSP 1 Score: 59.3 bits (142), Expect = 3.610e-9 Identity = 28/56 (50.00%), Postives = 40/56 (71.43%), Query Frame = 1
Query: 1 DNQGAEKMARNKHTSRRTRHIDVKHHIVRDAVEVGKVDVAYVGTGKQHSDVLTKAL 168
DNQ A MA+N+ +RT+H+D+K+H +RD VE G V + YV T KQ +D+ TK+L
Sbjct: 152 DNQSAIHMAKNRENGKRTKHVDIKYHFIRDEVEKGNVILKYVPTDKQVADMFTKSL 207
BLAST of mRNA_H-paniculata_contig41834.10741.1 vs. uniprot
Match: A0A182G3Q0_AEDAL (Uncharacterized protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182G3Q0_AEDAL) HSP 1 Score: 56.6 bits (135), Expect = 5.650e-9 Identity = 29/56 (51.79%), Postives = 37/56 (66.07%), Query Frame = 1
Query: 1 DNQGAEKMARNKHTSRRTRHIDVKHHIVRDAVEVGKVDVAYVGTGKQHSDVLTKAL 168
DNQ A +A+N RT+HID++HH +RDA E G V V Y+ T KQ +D LTK L
Sbjct: 31 DNQSAISVAKNGGYQPRTKHIDIRHHFIRDAWEKGDVQVVYISTDKQTADGLTKPL 86
BLAST of mRNA_H-paniculata_contig41834.10741.1 vs. uniprot
Match: A0A6A3XRN8_9STRA (Uncharacterized protein n=7 Tax=Phytophthora TaxID=4783 RepID=A0A6A3XRN8_9STRA) HSP 1 Score: 57.0 bits (136), Expect = 6.030e-9 Identity = 29/56 (51.79%), Postives = 39/56 (69.64%), Query Frame = 1
Query: 1 DNQGAEKMARNKHTSRRTRHIDVKHHIVRDAVEVGKVDVAYVGTGKQHSDVLTKAL 168
DNQGA +A+N RT+H+D++HH +R+ VE G V V YV T Q +D+LTKAL
Sbjct: 48 DNQGAIALAQNAGYHARTKHVDIRHHFIRENVERGTVKVEYVDTKNQLADMLTKAL 103
BLAST of mRNA_H-paniculata_contig41834.10741.1 vs. uniprot
Match: A0A0A9YPH4_LYGHE (Copia protein n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9YPH4_LYGHE) HSP 1 Score: 59.3 bits (142), Expect = 6.810e-9 Identity = 26/56 (46.43%), Postives = 40/56 (71.43%), Query Frame = 1
Query: 1 DNQGAEKMARNKHTSRRTRHIDVKHHIVRDAVEVGKVDVAYVGTGKQHSDVLTKAL 168
DNQ +ARN+ S+R +HID+KHH +R+ V+ G + + YV T +Q++D+LTK L
Sbjct: 273 DNQSCIHLARNRENSKRIKHIDIKHHFIREKVDEGVIKLNYVSTSEQNADILTKGL 328
BLAST of mRNA_H-paniculata_contig41834.10741.1 vs. uniprot
Match: A0A8D9ANA1_9HEMI (Copia protein n=3 Tax=Cacopsylla melanoneura TaxID=428564 RepID=A0A8D9ANA1_9HEMI) HSP 1 Score: 59.3 bits (142), Expect = 7.230e-9 Identity = 28/56 (50.00%), Postives = 40/56 (71.43%), Query Frame = 1
Query: 1 DNQGAEKMARNKHTSRRTRHIDVKHHIVRDAVEVGKVDVAYVGTGKQHSDVLTKAL 168
DNQ A MA+N+ +RT+H+D+K+H +RD VE G V + YV T KQ +D+ TK+L
Sbjct: 536 DNQSAIHMAKNRENGKRTKHVDIKYHFIRDEVEKGNVILKYVPTDKQVADMFTKSL 591
BLAST of mRNA_H-paniculata_contig41834.10741.1 vs. uniprot
Match: A0A0J7KA47_LASNI (Retroelement pol polyprotein n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7KA47_LASNI) HSP 1 Score: 59.3 bits (142), Expect = 7.280e-9 Identity = 28/56 (50.00%), Postives = 41/56 (73.21%), Query Frame = 1
Query: 1 DNQGAEKMARNKHTSRRTRHIDVKHHIVRDAVEVGKVDVAYVGTGKQHSDVLTKAL 168
DNQG+ K+ +N +RT+HIDV+ H +R+ E G+VD+ YV + KQ +D+LTKAL
Sbjct: 1157 DNQGSIKLVKNLEFHKRTKHIDVRFHFIREVYENGQVDIKYVPSSKQLADILTKAL 1212
BLAST of mRNA_H-paniculata_contig41834.10741.1 vs. uniprot
Match: A0A4Y9YHS6_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Dentipellis fragilis TaxID=205917 RepID=A0A4Y9YHS6_9AGAM) HSP 1 Score: 59.3 bits (142), Expect = 7.290e-9 Identity = 31/56 (55.36%), Postives = 40/56 (71.43%), Query Frame = 1
Query: 1 DNQGAEKMARNKHTSRRTRHIDVKHHIVRDAVEVGKVDVAYVGTGKQHSDVLTKAL 168
DNQ A +ARN RT+HIDV+HH +R+ VE G +D+ YV TG+Q +DVLTK L
Sbjct: 1355 DNQSAMAIARNPAFHARTKHIDVRHHFLREKVEEGILDLEYVPTGEQVADVLTKGL 1410 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig41834.10741.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig41834.10741.1 >prot_H-paniculata_contig41834.10741.1 ID=prot_H-paniculata_contig41834.10741.1|Name=mRNA_H-paniculata_contig41834.10741.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=49bp MARNKHTSRRTRHIDVKHHIVRDAVEVGKVDVAYVGTGKQHSDVLTKALback to top mRNA from alignment at H-paniculata_contig41834:5..172+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig41834.10741.1 ID=mRNA_H-paniculata_contig41834.10741.1|Name=mRNA_H-paniculata_contig41834.10741.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=168bp|location=Sequence derived from alignment at H-paniculata_contig41834:5..172+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig41834:5..172+ >mRNA_H-paniculata_contig41834.10741.1 ID=mRNA_H-paniculata_contig41834.10741.1|Name=mRNA_H-paniculata_contig41834.10741.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=294bp|location=Sequence derived from alignment at H-paniculata_contig41834:5..172+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |