mRNA_H-paniculata_contig41814.10735.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig41814.10735.1
Unique NamemRNA_H-paniculata_contig41814.10735.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig41814.10735.1 vs. uniprot
Match: A0A6H5JPF4_9PHAE (GMP synthase (glutamine-hydrolyzing) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPF4_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 8.940e-20
Identity = 41/43 (95.35%), Postives = 42/43 (97.67%), Query Frame = 1 
Query:    1 ILQEEAERIGKVDFLLQGTLYPDVIESISYKGPSATIKSHHNV 129
            + QEEAERIGKVDFLLQGTLYPDVIESISYKGPSATIKSHHNV
Sbjct:  104 VFQEEAERIGKVDFLLQGTLYPDVIESISYKGPSATIKSHHNV 146
[Close]
BLAST of mRNA_H-paniculata_contig41814.10735.1 vs. uniprot
Match: D7FZ84_ECTSI (GMP synthase (glutamine-hydrolyzing) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ84_ECTSI)

HSP 1 Score: 87.0 bits (214), Expect = 5.660e-19
Identity = 41/43 (95.35%), Postives = 42/43 (97.67%), Query Frame = 1 
Query:    1 ILQEEAERIGKVDFLLQGTLYPDVIESISYKGPSATIKSHHNV 129
            + QEEAERIGKVDFLLQGTLYPDVIESISYKGPSATIKSHHNV
Sbjct:  228 VFQEEAERIGKVDFLLQGTLYPDVIESISYKGPSATIKSHHNV 270
[Close]
BLAST of mRNA_H-paniculata_contig41814.10735.1 vs. uniprot
Match: A0A2D4CHB3_PYTIN (GMP synthase (glutamine-hydrolyzing) n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4CHB3_PYTIN)

HSP 1 Score: 84.7 bits (208), Expect = 4.500e-18
Identity = 40/43 (93.02%), Postives = 42/43 (97.67%), Query Frame = 1 
Query:    1 ILQEEAERIGKVDFLLQGTLYPDVIESISYKGPSATIKSHHNV 129
            I QEEA+RIGKVDFLLQGTLYPDVIESISYKGPSATIK+HHNV
Sbjct:  320 IFQEEAKRIGKVDFLLQGTLYPDVIESISYKGPSATIKTHHNV 362
[Close]
BLAST of mRNA_H-paniculata_contig41814.10735.1 vs. uniprot
Match: A0A7V2SWC9_9DELT (Glutamine-hydrolyzing GMP synthase (Fragment) n=1 Tax=Dissulfuribacter thermophilus TaxID=1156395 RepID=A0A7V2SWC9_9DELT)

HSP 1 Score: 80.5 bits (197), Expect = 9.000e-17
Identity = 36/43 (83.72%), Postives = 41/43 (95.35%), Query Frame = 1 
Query:    1 ILQEEAERIGKVDFLLQGTLYPDVIESISYKGPSATIKSHHNV 129
            + +EEA+RIGKVDFL QGTLYPDVIES+S+KGPSATIKSHHNV
Sbjct:  312 VFEEEAKRIGKVDFLAQGTLYPDVIESVSFKGPSATIKSHHNV 354
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BLAST of mRNA_H-paniculata_contig41814.10735.1 vs. uniprot
Match: A0A6V1SBM3_HETAK (GMP synthase (glutamine-hydrolyzing) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1SBM3_HETAK)

HSP 1 Score: 79.7 bits (195), Expect = 2.640e-16
Identity = 40/44 (90.91%), Postives = 41/44 (93.18%), Query Frame = 1 
Query:    1 ILQEEAERI-GKVDFLLQGTLYPDVIESISYKGPSATIKSHHNV 129
            I QEEA RI G+VDFLLQGTLYPDVIESISYKGPSATIKSHHNV
Sbjct:  342 IFQEEANRIEGRVDFLLQGTLYPDVIESISYKGPSATIKSHHNV 385
[Close]
BLAST of mRNA_H-paniculata_contig41814.10735.1 vs. uniprot
Match: A0A1B9F3H9_9DELT (GMP synthase [glutamine-hydrolyzing] n=1 Tax=Dissulfuribacter thermophilus TaxID=1156395 RepID=A0A1B9F3H9_9DELT)

HSP 1 Score: 79.3 bits (194), Expect = 3.580e-16
Identity = 36/43 (83.72%), Postives = 41/43 (95.35%), Query Frame = 1 
Query:    1 ILQEEAERIGKVDFLLQGTLYPDVIESISYKGPSATIKSHHNV 129
            I +EEA+RIGKV+FL QGTLYPDVIES+S+KGPSATIKSHHNV
Sbjct:  312 IFEEEAKRIGKVEFLAQGTLYPDVIESVSFKGPSATIKSHHNV 354
[Close]
BLAST of mRNA_H-paniculata_contig41814.10735.1 vs. uniprot
Match: A0A024GP58_9STRA (GMP synthase (glutamine-hydrolyzing) n=2 Tax=Albugo TaxID=65356 RepID=A0A024GP58_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 4.910e-16
Identity = 35/43 (81.40%), Postives = 40/43 (93.02%), Query Frame = 1 
Query:    1 ILQEEAERIGKVDFLLQGTLYPDVIESISYKGPSATIKSHHNV 129
            I QEEA R+G ++FLLQGTLYPDVIES+SYKGPSATIK+HHNV
Sbjct:  319 IFQEEATRLGNIEFLLQGTLYPDVIESVSYKGPSATIKTHHNV 361
[Close]
BLAST of mRNA_H-paniculata_contig41814.10735.1 vs. uniprot
Match: A0A3A4NIX8_9BACT (GMP synthase [glutamine-hydrolyzing] n=1 Tax=Candidatus Omnitrophica bacterium TaxID=2035772 RepID=A0A3A4NIX8_9BACT)

HSP 1 Score: 78.6 bits (192), Expect = 6.680e-16
Identity = 34/43 (79.07%), Postives = 41/43 (95.35%), Query Frame = 1 
Query:    1 ILQEEAERIGKVDFLLQGTLYPDVIESISYKGPSATIKSHHNV 129
            + +EEAE +G+VDFLLQGTLYPDVIES+S+KGPSATIK+HHNV
Sbjct:  306 VFEEEAEHLGQVDFLLQGTLYPDVIESVSFKGPSATIKTHHNV 348
[Close]
BLAST of mRNA_H-paniculata_contig41814.10735.1 vs. uniprot
Match: I2CQR9_NANGC (GMP synthase (glutamine-hydrolyzing) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQR9_NANGC)

HSP 1 Score: 78.6 bits (192), Expect = 6.710e-16
Identity = 36/43 (83.72%), Postives = 39/43 (90.70%), Query Frame = 1 
Query:    1 ILQEEAERIGKVDFLLQGTLYPDVIESISYKGPSATIKSHHNV 129
            +  EE+ RIG+ DFLLQGTLYPDVIESISYKGPSATIKSHHNV
Sbjct:  322 VFDEESHRIGECDFLLQGTLYPDVIESISYKGPSATIKSHHNV 364
[Close]
BLAST of mRNA_H-paniculata_contig41814.10735.1 vs. uniprot
Match: A0A2P4XG79_9STRA (GMP synthase (glutamine-hydrolyzing) (Fragment) n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XG79_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 6.730e-16
Identity = 39/44 (88.64%), Postives = 41/44 (93.18%), Query Frame = 1 
Query:    1 ILQEEAERIGK-VDFLLQGTLYPDVIESISYKGPSATIKSHHNV 129
            + QEEAERIG  VDFLLQGTLYPDVIESISYKGPSATIK+HHNV
Sbjct:  321 LFQEEAERIGHPVDFLLQGTLYPDVIESISYKGPSATIKTHHNV 364
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig41814.10735.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JPF4_9PHAE8.940e-2095.35GMP synthase (glutamine-hydrolyzing) n=1 Tax=Ectoc... [more]
D7FZ84_ECTSI5.660e-1995.35GMP synthase (glutamine-hydrolyzing) n=1 Tax=Ectoc... [more]
A0A2D4CHB3_PYTIN4.500e-1893.02GMP synthase (glutamine-hydrolyzing) n=2 Tax=Pythi... [more]
A0A7V2SWC9_9DELT9.000e-1783.72Glutamine-hydrolyzing GMP synthase (Fragment) n=1 ... [more]
A0A6V1SBM3_HETAK2.640e-1690.91GMP synthase (glutamine-hydrolyzing) n=1 Tax=Heter... [more]
A0A1B9F3H9_9DELT3.580e-1683.72GMP synthase [glutamine-hydrolyzing] n=1 Tax=Dissu... [more]
A0A024GP58_9STRA4.910e-1681.40GMP synthase (glutamine-hydrolyzing) n=2 Tax=Albug... [more]
A0A3A4NIX8_9BACT6.680e-1679.07GMP synthase [glutamine-hydrolyzing] n=1 Tax=Candi... [more]
I2CQR9_NANGC6.710e-1683.72GMP synthase (glutamine-hydrolyzing) n=1 Tax=Nanno... [more]
A0A2P4XG79_9STRA6.730e-1688.64GMP synthase (glutamine-hydrolyzing) (Fragment) n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig41814contigH-paniculata_contig41814:1175..1303 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score87.8
Seed ortholog evalue1.3e-15
Seed eggNOG ortholog2880.D7FZ84
Preferred nameGMPS
KEGG rclassRC00010,RC00204
KEGG koko:K01951,ko:K04257
KEGG ReactionR01230,R01231,R08244
KEGG Pathwayko00230,ko00983,ko01100,ko04740,map00230,map00983,map01100,map04740
KEGG ModuleM00050
Hectar predicted targeting categoryno signal peptide or anchor
GOsGO:0000902,GO:0000904,GO:0001101,GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005694,GO:0005700,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006144,GO:0006163,GO:0006164,GO:0006177,GO:0006325,GO:0006464,GO:0006508,GO:0006520,GO:0006541,GO:0006543,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006928,GO:0006935,GO:0006996,GO:0007275,GO:0007399,GO:0007409,GO:0007411,GO:0008047,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009063,GO:0009064,GO:0009065,GO:0009112,GO:0009113,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009605,GO:0009653,GO:0009893,GO:0009987,GO:0010033,GO:0010243,GO:0010604,GO:0010952,GO:0016043,GO:0016054,GO:0016504,GO:0016569,GO:0016570,GO:0016578,GO:0016579,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019222,GO:0019438,GO:0019538,GO:0019637,GO:0019693,GO:0019752,GO:0019899,GO:0022008,GO:0030030,GO:0030154,GO:0030162,GO:0030182,GO:0030234,GO:0031175,GO:0031323,GO:0031325,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032989,GO:0032990,GO:0032991,GO:0034404,GO:0034641,GO:0034654,GO:0035800,GO:0036211,GO:0040011,GO:0042221,GO:0042278,GO:0042330,GO:0042440,GO:0042451,GO:0042455,GO:0042493,GO:0042802,GO:0043085,GO:0043170,GO:0043200,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043412,GO:0043436,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045862,GO:0046037,GO:0046112,GO:0046128,GO:0046129,GO:0046148,GO:0046390,GO:0046395,GO:0046483,GO:0048468,GO:0048518,GO:0048522,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051276,GO:0051336,GO:0051345,GO:0052547,GO:0055086,GO:0060255,GO:0061134,GO:0061564,GO:0065007,GO:0065009,GO:0070646,GO:0070647,GO:0071704,GO:0071840,GO:0072521,GO:0072522,GO:0080090,GO:0090407,GO:0097485,GO:0098772,GO:0120036,GO:0120039,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901367,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901657,GO:1901659,GO:1901698,GO:1901700,GO:2000152,GO:2000158
EggNOG free text desc.GMP synthase (glutamine-hydrolyzing) activity
EggNOG OGsCOG0519@1,KOG1622@2759
EC6.3.5.2
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko04030
Exons1
Model size129
Cds size129
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930272.7848074-CDS-H-paniculata_contig41814:1174..13031622930272.7848074-CDS-H-paniculata_contig41814:1174..1303Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig41814 1175..1303 +
1691481219.8423288-CDS-H-paniculata_contig41814:1174..13031691481219.8423288-CDS-H-paniculata_contig41814:1174..1303Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig41814 1175..1303 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig41814.10735.1prot_H-paniculata_contig41814.10735.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig41814 1175..1303 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig41814.10735.1

>prot_H-paniculata_contig41814.10735.1 ID=prot_H-paniculata_contig41814.10735.1|Name=mRNA_H-paniculata_contig41814.10735.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=43bp
ILQEEAERIGKVDFLLQGTLYPDVIESISYKGPSATIKSHHNV
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mRNA from alignment at H-paniculata_contig41814:1175..1303+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig41814.10735.1 ID=mRNA_H-paniculata_contig41814.10735.1|Name=mRNA_H-paniculata_contig41814.10735.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=129bp|location=Sequence derived from alignment at H-paniculata_contig41814:1175..1303+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATTTTACAGGAAGAGGCGGAGCGCATCGGGAAGGTGGACTTTCTTCTCCA
GGGCACGCTGTATCCTGATGTGATCGAGAGTATTAGCTACAAGGGACCCT
CGGCGACAATTAAGAGCCATCACAATGTG
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Coding sequence (CDS) from alignment at H-paniculata_contig41814:1175..1303+

>mRNA_H-paniculata_contig41814.10735.1 ID=mRNA_H-paniculata_contig41814.10735.1|Name=mRNA_H-paniculata_contig41814.10735.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=258bp|location=Sequence derived from alignment at H-paniculata_contig41814:1175..1303+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATTTTACAGGAAGAGGCGGAGCGCATCGGGAAGGTGGACTTTCTTCTCCA
GGGCACGCTGTATCCTGATGTGATCGAGAGTATTAGCTACAAGGGACCCT
CGGCGACAATTAAGAGCCATCACAATGTGATTTTACAGGAAGAGGCGGAG
CGCATCGGGAAGGTGGACTTTCTTCTCCAGGGCACGCTGTATCCTGATGT
GATCGAGAGTATTAGCTACAAGGGACCCTCGGCGACAATTAAGAGCCATC
ACAATGTG
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