mRNA_H-paniculata_contig41460.10659.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig41460.10659.1 vs. uniprot
Match: A0A6H5KNM8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNM8_9PHAE) HSP 1 Score: 115 bits (288), Expect = 1.340e-27 Identity = 73/144 (50.69%), Postives = 88/144 (61.11%), Query Frame = 1
Query: 1 VLTPFFTDTSQDYVMTATLHIGCATEGATIYYTLEGGDP--------GKGAPGSREYDGKVVVSDIGPHTLRAIGTKDGMENSDIAQKDFMVEASERVATPKLTFDGD---VEPGHGEQAFLRNVTITMSCSTPNATIYYTTDG 399
V TP FT T+Q VM+ T HI C TEGATI YTL+G DP + APG G V V IG T+RA+ TK+GMENSD AQK ++ ++V P L F G+ + E AFLR V ITM+CSTPNAT+ YTTDG
Sbjct: 295 VATPRFTGTAQHSVMSYTDHIECDTEGATIRYTLDGSDPVTTTTTSVHEVAPG-----GSVFVKTIGTVTIRAVATKEGMENSDEAQKTVTIQ--DQVEDPALFFAGESATADVTQEENAFLRTVAITMNCSTPNATVRYTTDG 431
BLAST of mRNA_H-paniculata_contig41460.10659.1 vs. uniprot
Match: D8LI16_ECTSI (NAGPA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI16_ECTSI) HSP 1 Score: 115 bits (287), Expect = 3.900e-27 Identity = 71/139 (51.08%), Postives = 84/139 (60.43%), Query Frame = 1
Query: 1 VLTPFFTDTSQDYVMTATLHIGCATEGATIYYTLEGGDPGKGAPGSREY---DGKVVVSDIGPHTLRAIGTKDGMENSDIAQKDFMVEASERVATPKLTFDGD---VEPGHGEQAFLRNVTITMSCSTPNATIYYTTDG 399
V TP FT T+Q VM+ T HI C TEGATI YTL+G DP S G V V IG T+RA+ TK+GMENSD AQK ++ E+V P L F G+ + E AFLR V ITM+CSTPN T+ YTTDG
Sbjct: 278 VATPRFTGTAQHSVMSYTDHIECDTEGATIRYTLDGSDPVSTTTASVHEVPPGGSVFVKTIGTVTIRAVATKEGMENSDEAQKTITIQ--EQVEDPALFFAGESATADVTDEENAFLRTVAITMNCSTPNTTVRYTTDG 414
BLAST of mRNA_H-paniculata_contig41460.10659.1 vs. uniprot
Match: A0A1H9B4M9_9FIRM (Putative cell wall binding repeat-containing protein n=1 Tax=Lachnospiraceae bacterium NE2001 TaxID=1520823 RepID=A0A1H9B4M9_9FIRM) HSP 1 Score: 73.9 bits (180), Expect = 1.050e-12 Identity = 47/133 (35.34%), Postives = 69/133 (51.88%), Query Frame = 1
Query: 1 VLTPFFTDTSQDYVMTATLHIGCATEGATIYYTLEGGDPGKGAPGSREYDGKVVVSDIGPHTLRAIGTKDGMENSDIAQKDFMVEASERVATPKLTFDGDVEPGHGEQAFLRNVTITMSCSTPNATIYYTTDG 399
V TP F+ Y ++ I CAT+GA IYYT +G DP S Y + V + T++AI K+GM +S +A+ + + V TP + P G + + T+T+SC+T +A IYYTTDG
Sbjct: 218 VATPTFSPVEGTYTSVQSVEIDCATDGAIIYYTTDGSDP---TISSSVYSAAISVDET--KTIKAIAVKEGMSDSAVAEATYTINIPV-VETPTFS------PAAG--TYTKTQTVTISCATEDAKIYYTTDG 336
BLAST of mRNA_H-paniculata_contig41460.10659.1 vs. uniprot
Match: A0A3S0DUP1_9HYPH (DUF2793 domain-containing protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A3S0DUP1_9HYPH) HSP 1 Score: 72.8 bits (177), Expect = 2.510e-12 Identity = 50/133 (37.59%), Postives = 69/133 (51.88%), Query Frame = 1
Query: 1 VLTPFFTDTSQDYVMTATLHIGCATEGATIYYTLEGGDPGKGAPGSREYDGKVVVSDIGPHTLRAIGTKDGMENSDIAQKDFMVEASERVATPKLTFDGDVEPGHGEQAFLRNVTITMSCSTPNATIYYTTDG 399
V TP F+ + Y T ++ I C T GATIYYT +G P S Y G + V+ T++A+ K GM +S + + + S+ VATP + P G ++VTI SC+T ATIYYTTDG
Sbjct: 507 VSTPTFSPAAGSYTGTQSVTISCTTSGATIYYTTDGSTP---TTSSSVYAGAISVAATA--TVKALAVKSGMADSAVGSAAYTITLSQ-VATPTFS------PAAGSYTGTQSVTI--SCATSGATIYYTTDG 625
BLAST of mRNA_H-paniculata_contig41460.10659.1 vs. uniprot
Match: A0A7S1CJG4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CJG4_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 2.800e-12 Identity = 48/132 (36.36%), Postives = 74/132 (56.06%), Query Frame = 1
Query: 10 PFFTDTSQD--YVMTATLHIGCATEGATIYYTLEGGDPGKGAPGSREYDGKVVVSDIGPHTLRAIGTKDGMENSDIAQKDFMVEASERVATPKLTFDGDVEPGHGEQAFLRNVTITMSCSTPNATIYYTTDG 399
P F S D +V++ T+ + CA++GAT+++T +G P +P Y G + IG T +AIG K G +S +A F + ++VA P ++ D P G F +VTIT++ +T ATI+YTTDG
Sbjct: 82 PQFFPPSDDRTHVLSVTISLDCASDGATVHFTTDGSTPTAASP---VYSGPFEWTTIGVTTFKAIGVKAGDVDSPVAVAHFTI--LDKVADPVISTD----PA-GPPPFTTSVTITITTATDGATIHYTTDG 203
BLAST of mRNA_H-paniculata_contig41460.10659.1 vs. uniprot
Match: A0A534KPI5_9EURY (Uncharacterized protein n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A534KPI5_9EURY) HSP 1 Score: 72.4 bits (176), Expect = 3.440e-12 Identity = 51/133 (38.35%), Postives = 72/133 (54.14%), Query Frame = 1
Query: 1 VLTPFFTDTSQDYVMTATLHIGCATEGATIYYTLEGGDPGKGAPGSREYDGKVVVSDIGPHTLRAIGTKDGMENSDIAQKDFMVEASERVATPKLTFDGDVEPGHGEQAFLRNVTITMSCSTPNATIYYTTDG 399
V TP F+ + Y + T+ I +T GATIYYT++G P +P Y G V V+ T++A+ GM NS +A + + RVATP + PG G + R+V+I S +TP ATIYYTT+G
Sbjct: 719 VATPAFSPAAGTYTSSVTVTISDSTAGATIYYTIDGSTPTTASP---VYAGSVTVTQA--TTVKAMAAASGMTNSAVASAPYTI----RVATPTFS------PGGGTYSGPRSVSI--SDTTPGATIYYTTNG 834
BLAST of mRNA_H-paniculata_contig41460.10659.1 vs. uniprot
Match: A0A7I8DIB0_9FIRM (Chitinase n=1 Tax=Anaerocolumna chitinilytica TaxID=1727145 RepID=A0A7I8DIB0_9FIRM) HSP 1 Score: 69.7 bits (169), Expect = 2.820e-11 Identity = 44/133 (33.08%), Postives = 65/133 (48.87%), Query Frame = 1
Query: 1 VLTPFFTDTSQDYVMTATLHIGCATEGATIYYTLEGGDPGKGAPGSREYDGKVVVSDIGPHTLRAIGTKDGMENSDIAQKDFMVEASERVATPKLTFDGDVEPGHGEQAFLRNVTITMSCSTPNATIYYTTDG 399
V TP F+ Y T + I C+T G+TI YTL G +P S Y G + ++ T++A GM +S A + + ++ A P + P G + N+ +T++CST NATI YTTDG
Sbjct: 86 VATPTFSPAGGTYTTTQNVTIACSTAGSTIRYTLNGSEP---TSSSTAYTGAIAIAST--TTVKAKAFASGMTDSQTASATYTINKADTTANPVFS------PAAG--TYYGNLNVTLTCSTSNATIRYTTDG 205
BLAST of mRNA_H-paniculata_contig41460.10659.1 vs. uniprot
Match: UPI00051BF846 (chitobiase/beta-hexosaminidase C-terminal domain-containing protein n=1 Tax=Clostridium sp. KNHs205 TaxID=1449050 RepID=UPI00051BF846) HSP 1 Score: 68.9 bits (167), Expect = 5.240e-11 Identity = 44/133 (33.08%), Postives = 66/133 (49.62%), Query Frame = 1
Query: 1 VLTPFFTDTSQDYVMTATLHIGCATEGATIYYTLEGGDPGKGAPGSREYDGKVVVSDIGPHTLRAIGTKDGMENSDIAQKDFMVEASERVATPKLTFDGDVEPGHGEQAFLRNVTITMSCSTPNATIYYTTDG 399
V TP + Y + ++ I C+T G+TI YTL+G +P S Y G + +S T++A GM +S A + + + V+ P T P G + N+ +T++CST NATI YTTDG
Sbjct: 86 VATPVLSPAGGTYTASQSVTITCSTAGSTIRYTLDGNEP---TASSTAYTGAITISATA--TVKAKAFASGMNDSQTASATYTINKPDTVSAPVFT------PAAG--TYYGNLNVTLTCSTSNATIRYTTDG 205
BLAST of mRNA_H-paniculata_contig41460.10659.1 vs. uniprot
Match: UPI000694A2A9 (glycoside hydrolase family 3 C-terminal domain-containing protein n=1 Tax=Thermotoga profunda TaxID=1508420 RepID=UPI000694A2A9) HSP 1 Score: 68.2 bits (165), Expect = 1.040e-10 Identity = 47/127 (37.01%), Postives = 68/127 (53.54%), Query Frame = 1
Query: 28 SQDYVMTATLHIGCATEGATIYYTLEGGDPGKGAPGSREYDGKVV---VSDIGPHTLRAIGTKDGMENSDIAQKDFMVEASERVATPKLTFDGDVEPGHGEQAFLRNVTITMSCSTPNATIYYTTDG 399
S Y + + + +T GA IYYT++G DP +VV +S TL+ + KDGME+SD+ +++ RV+TPK + PG G+ L IT+SC+TP ATIY+TTDG
Sbjct: 36 SGTYDLPQMVTVSSSTPGAQIYYTIDGTDP------LSSQTRRVVRWFISVNTSMTLKLVAVKDGMESSDVVTYQYII----RVSTPKAS------PGPGDWKKLPEK-ITLSCATPGATIYFTTDG 145
BLAST of mRNA_H-paniculata_contig41460.10659.1 vs. uniprot
Match: A0A1V5URV1_9BACT (Putative kinase inhibitor protein n=1 Tax=bacterium ADurb.Bin243 TaxID=1866936 RepID=A0A1V5URV1_9BACT) HSP 1 Score: 67.8 bits (164), Expect = 1.380e-10 Identity = 49/132 (37.12%), Postives = 69/132 (52.27%), Query Frame = 1
Query: 7 TPFFTDTSQDYVMTATLHIGCATEGATIYYTLEGGDPGKGAPGSREYDGKVVVSDIGPHTLRAIGTKDGMENSDIAQKDFMVEASE-RVATPKLTFDGDVEPGHGEQAFLRNVTITMSCSTPNATIYYTTDG 399
TP F+ + Y T ++ I CAT A IYYTL+G P S Y G + VS T++AI K GM NSDIA ++ + +VA P + V G + T+T++C+TP A IYY+T+G
Sbjct: 386 TPVFSIAAGTYAATQSVEITCATPNAKIYYTLDGTAP---TSSSTLYSGTLSVSITS--TIKAIAIKTGMANSDIAMANYTINIPALQVAKPVFS----VLAG----TYTTAQTLTITCATPGAIIYYSTNG 504 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig41460.10659.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig41460.10659.1 >prot_H-paniculata_contig41460.10659.1 ID=prot_H-paniculata_contig41460.10659.1|Name=mRNA_H-paniculata_contig41460.10659.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=133bp VLTPFFTDTSQDYVMTATLHIGCATEGATIYYTLEGGDPGKGAPGSREYDback to top mRNA from alignment at H-paniculata_contig41460:148..1013- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig41460.10659.1 ID=mRNA_H-paniculata_contig41460.10659.1|Name=mRNA_H-paniculata_contig41460.10659.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=866bp|location=Sequence derived from alignment at H-paniculata_contig41460:148..1013- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig41460:148..1013- >mRNA_H-paniculata_contig41460.10659.1 ID=mRNA_H-paniculata_contig41460.10659.1|Name=mRNA_H-paniculata_contig41460.10659.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=798bp|location=Sequence derived from alignment at H-paniculata_contig41460:148..1013- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |