mRNA_H-paniculata_contig41412.10649.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig41412.10649.1 vs. uniprot
Match: D7FS78_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS78_ECTSI) HSP 1 Score: 160 bits (405), Expect = 5.280e-45 Identity = 79/123 (64.23%), Postives = 94/123 (76.42%), Query Frame = 1
Query: 1 AVMVLSRLFLFVRYTKKHFVGVVLCLGGLALTVLSDLLNSDPNSGHTHAIKGDVLCILGAAMYGASNVMQENFVKNHDRVEFLGMAGAFGVILSGVQTAALEWNELAEVVWTDQVVLFVIGYS 369
AVM+LSRL L +Y +KH GV LC+ GLALT++SDL + +SGH HA KGDVLCILGA +Y SNVMQE+FVKN++R EFLGMAG FG ++SGVQT ALE LAEV WT VVLF GY+
Sbjct: 158 AVMILSRLLLRAQYNEKHMTGVGLCVVGLALTIVSDLQGDEADSGHPHAFKGDVLCILGATLYAGSNVMQEDFVKNYNRREFLGMAGLFGTVISGVQTLALEKQLLAEVEWTRSVVLFTFGYA 280
BLAST of mRNA_H-paniculata_contig41412.10649.1 vs. uniprot
Match: A0A836CB98_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB98_9STRA) HSP 1 Score: 120 bits (301), Expect = 3.770e-30 Identity = 62/120 (51.67%), Postives = 82/120 (68.33%), Query Frame = 1
Query: 7 MVLSRLFLFVRYTKKHFVGVVLCLGGLALTVLSDLLNSDPNSGHTHAIKGDVLCILGAAMYGASNVMQENFVKNHDRVEFLGMAGAFGVILSGVQTAALEWNELAEVVWTDQVVLFVIGY 366
M++SRLFL RYT KH +GV+LCL GLALTV++DL + GH+ KGD+LC+ GA +YG NVMQE+ VK HDR E LGM GAFGV+ +GVQ LE + ++ ++ FV+ Y
Sbjct: 123 MLMSRLFLDARYTSKHLLGVLLCLVGLALTVINDLEDKTAMKGHS--FKGDLLCLGGAFLYGCLNVMQESIVKKHDRSELLGMTGAFGVLFAGVQFLILERGPMQDMHYSHAGAAFVLLY 240
BLAST of mRNA_H-paniculata_contig41412.10649.1 vs. uniprot
Match: UPI0009E42797 (solute carrier family 35 member F1-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E42797) HSP 1 Score: 113 bits (283), Expect = 1.470e-27 Identity = 62/124 (50.00%), Postives = 81/124 (65.32%), Query Frame = 1
Query: 1 AVMVLSRLFLFVRYTKKHFVGVVLCLGGLALTVLSDLLNSDP-NSGHTHAIKGDVLCILGAAMYGASNVMQENFVKNHDRVEFLGMAGAFGVILSGVQTAALEWNELAEVVWTDQVVLFVIGYS 369
+V+VLS +FL VRY H+ GV+ CL G+A V++D S SG AI GDVL + GA MYG SNV QE VKN RVEFLGM G FG I+S +Q LE ++L+ + W ++VLF+IG+
Sbjct: 133 SVLVLSWIFLKVRYECIHYSGVLTCLAGIACLVVADYYGSRYYGSGKNQAI-GDVLVLCGAVMYGVSNVAQEFVVKNFSRVEFLGMIGLFGSIISAIQMVILERHQLSTIEWDSKIVLFIIGFG 255
BLAST of mRNA_H-paniculata_contig41412.10649.1 vs. uniprot
Match: A0A6P4Y351_BRABE (LOW QUALITY PROTEIN: solute carrier family 35 member F2-like n=4 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4Y351_BRABE) HSP 1 Score: 112 bits (281), Expect = 4.140e-27 Identity = 57/122 (46.72%), Postives = 82/122 (67.21%), Query Frame = 1
Query: 4 VMVLSRLFLFVRYTKKHFVGVVLCLGGLALTVLSDLLNSDPNSGHTHAIKGDVLCILGAAMYGASNVMQENFVKNHDRVEFLGMAGAFGVILSGVQTAALEWNELAEVVWTDQVVLFVIGYS 369
V+VLS +FL R+ H+ G+ +CL G+ V +DLL+ + G T + GD+LC+LGAA+YG SNV +E V++ RVEFLGM G FG ++ G+Q A LE +ELA + WT QV L +G++
Sbjct: 148 VLVLSWIFLHSRFKWVHYGGIAVCLLGVGSLVGADLLSGRDHVGGTDKLLGDMLCLLGAALYGVSNVAEEYVVRHFTRVEFLGMLGIFGSVICGLQLAILERHELATIQWTWQVGLLFVGFA 269
BLAST of mRNA_H-paniculata_contig41412.10649.1 vs. uniprot
Match: A0A1I7VN01_LOALO (Uncharacterized protein n=1 Tax=Loa loa TaxID=7209 RepID=A0A1I7VN01_LOALO) HSP 1 Score: 113 bits (283), Expect = 7.460e-27 Identity = 54/122 (44.26%), Postives = 81/122 (66.39%), Query Frame = 1
Query: 4 VMVLSRLFLFVRYTKKHFVGVVLCLGGLALTVLSDLLNSDPNSGHTHAIKGDVLCILGAAMYGASNVMQENFVKNHDRVEFLGMAGAFGVILSGVQTAALEWNELAEVVWTDQVVLFVIGYS 369
V++LS LFL RY H +GV +CL G+A+ + +D L SG ++ I GDVLC+ G+ +Y NV +E VK ++RVE+LGM G FG I+SG+Q AALE ELA + W+ +V++ + ++
Sbjct: 289 VLLLSWLFLSTRYLLTHIIGVGICLIGIAVLIWADALEGKGASGGSNRILGDVLCLTGSVLYAVGNVCEEFLVKQNNRVEYLGMVGLFGSIISGIQLAALEHRELASINWSGMIVVYYVLFA 410
BLAST of mRNA_H-paniculata_contig41412.10649.1 vs. uniprot
Match: K3W9Z4_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W9Z4_GLOUD) HSP 1 Score: 110 bits (275), Expect = 1.010e-26 Identity = 58/127 (45.67%), Postives = 80/127 (62.99%), Query Frame = 1
Query: 4 VMVLSRLFLFVRYTKKHFVGVVLCLGGLALTVLSDLLNSDPN-----SGHTHAIKGDVLCILGAAMYGASNVMQENFVKNHDR-VEFLGMAGAFGVILSGVQTAALEWNELAEVVWTDQVVLFVIGY 366
VM+LS +FL +YT+ HFV V CLGG+ + V+SD+L N S + A+ GD LC+LG+++Y SNV QE VK DR +EFLGM G G ++S +Q A E + L E+ WT VL ++GY
Sbjct: 107 VMLLSAVFLSAKYTRMHFVAVSFCLGGITILVVSDILRDQANWDGQFSWNASALYGDFLCLLGSSIYACSNVGQEYLVKKKDRQMEFLGMIGLCGFVISSLQAVAFEGDVLREIQWTTPSVLCLLGY 233
BLAST of mRNA_H-paniculata_contig41412.10649.1 vs. uniprot
Match: A0A0R3RI81_9BILA (Uncharacterized protein n=1 Tax=Elaeophora elaphi TaxID=1147741 RepID=A0A0R3RI81_9BILA) HSP 1 Score: 113 bits (282), Expect = 1.070e-26 Identity = 54/122 (44.26%), Postives = 81/122 (66.39%), Query Frame = 1
Query: 4 VMVLSRLFLFVRYTKKHFVGVVLCLGGLALTVLSDLLNSDPNSGHTHAIKGDVLCILGAAMYGASNVMQENFVKNHDRVEFLGMAGAFGVILSGVQTAALEWNELAEVVWTDQVVLFVIGYS 369
V++LS LFL RY H +GV +CL G+A+ + +D L +SG ++ + GDVLC+ G+ +Y NV +E VK + RVE+LGM G FG I+SG+Q AALE ELA V W+ +V++ + ++
Sbjct: 283 VLLLSWLFLSTRYLLTHIIGVGICLVGIAVLIWADALEGKGSSGDSNRVLGDVLCLTGSILYAVGNVGEEFLVKQNSRVEYLGMVGLFGSIISGIQLAALEHRELASVNWSGTIVVYYLLFA 404
BLAST of mRNA_H-paniculata_contig41412.10649.1 vs. uniprot
Match: A0A4U5PCG7_STECR (Uncharacterized protein n=2 Tax=Steinernema carpocapsae TaxID=34508 RepID=A0A4U5PCG7_STECR) HSP 1 Score: 112 bits (279), Expect = 1.130e-26 Identity = 58/117 (49.57%), Postives = 79/117 (67.52%), Query Frame = 1
Query: 4 VMVLSRLFLFVRYTKKHFVGVVLCLGGLALTVLSDLLNSDPNSGHTHAIKGDVLCILGAAMYGASNVMQENFVK-NHDRVEFLGMAGAFGVILSGVQTAALEWNELAEVVWTDQVVL 351
VMVLS LFL VRY H +GV +CL G+A ++SD+L+ +G + GD+LCI G+ +Y +NV +E +K N+ RVE+LGM G FG I+SG+Q A +E N LAEV WT V+L
Sbjct: 187 VMVLSWLFLSVRYLTSHVIGVGVCLVGIACVIVSDVLSGKGLAGGSDRFLGDMLCIGGSLLYAIANVAEEYLIKQNNSRVEYLGMVGLFGSIISGIQLAIIERNNLAEVNWTTSVIL 303
BLAST of mRNA_H-paniculata_contig41412.10649.1 vs. uniprot
Match: A0A3P7DNH2_WUCBA (Uncharacterized protein n=1 Tax=Wuchereria bancrofti TaxID=6293 RepID=A0A3P7DNH2_WUCBA) HSP 1 Score: 109 bits (272), Expect = 1.230e-26 Identity = 48/122 (39.34%), Postives = 79/122 (64.75%), Query Frame = 1
Query: 4 VMVLSRLFLFVRYTKKHFVGVVLCLGGLALTVLSDLLNSDPNSGHTHAIKGDVLCILGAAMYGASNVMQENFVKNHDRVEFLGMAGAFGVILSGVQTAALEWNELAEVVWTDQVVLFVIGYS 369
V++LS LFL RY H +GV +CL G+ + + +D L SG ++ + GDVLC++G+ +Y NV +E VK + R+E+LGM G FG I+SG+Q A LE +LA + W+ ++++ + ++
Sbjct: 2 VLLLSWLFLSTRYLLTHIIGVGICLIGITVLIWADALEGKGTSGDSNRVLGDVLCLIGSILYAIGNVSEEFLVKQNSRIEYLGMVGLFGSIISGIQLATLEHRQLASINWSGMIIIYYLLFA 123
BLAST of mRNA_H-paniculata_contig41412.10649.1 vs. uniprot
Match: G0P980_CAEBE (Uncharacterized protein n=2 Tax=Caenorhabditis brenneri TaxID=135651 RepID=G0P980_CAEBE) HSP 1 Score: 111 bits (278), Expect = 1.680e-26 Identity = 54/118 (45.76%), Postives = 74/118 (62.71%), Query Frame = 1
Query: 1 AVMVLSRLFLFVRYTKKHFVGVVLCLGGLALTVLSDLLNSDPNSGHTHAIKGDVLCILGAAMYGASNVMQENFVKNHDRVEFLGMAGAFGVILSGVQTAALEWNELAEVVWTDQVVLF 354
AV++LS LFL VRY H +GV +CL G+A + +D L + G + + GD+LC+ A +Y NV +E VK H R E+LGM G FG I+SGVQTA E L+++VWT + V F
Sbjct: 178 AVLLLSWLFLSVRYLASHILGVTICLIGIACVIWADALGAKGLEGGSERVFGDILCLAAALLYAVCNVAEEFLVKQHSRTEYLGMVGLFGCIVSGVQTAIFEQEALSKIVWTGETVSF 295 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig41412.10649.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig41412.10649.1 >prot_H-paniculata_contig41412.10649.1 ID=prot_H-paniculata_contig41412.10649.1|Name=mRNA_H-paniculata_contig41412.10649.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=124bp MVLSRLFLFVRYTKKHFVGVVLCLGGLALTVLSDLLNSDPNSGHTHAIKGback to top mRNA from alignment at H-paniculata_contig41412:328..1083- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig41412.10649.1 ID=mRNA_H-paniculata_contig41412.10649.1|Name=mRNA_H-paniculata_contig41412.10649.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=756bp|location=Sequence derived from alignment at H-paniculata_contig41412:328..1083- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig41412:328..1083- >mRNA_H-paniculata_contig41412.10649.1 ID=mRNA_H-paniculata_contig41412.10649.1|Name=mRNA_H-paniculata_contig41412.10649.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=744bp|location=Sequence derived from alignment at H-paniculata_contig41412:328..1083- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |