mRNA_H-paniculata_contig4136.10636.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4136.10636.1 vs. uniprot
Match: D7FR66_ECTSI (ADP/ATP translocase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FR66_ECTSI) HSP 1 Score: 547 bits (1409), Expect = 6.510e-188 Identity = 268/304 (88.16%), Postives = 289/304 (95.07%), Query Frame = 1
Query: 328 MADKKQSNFLVDFALGGVSGAIAKTATAPIERVKLILQTQDSNPRIKSGEIPRYTGILNCFTRVNQEQGLAAFWRGNMTNVIRYFPTQAFNFAFKDQIKAIFPKANPKENFWKFFAINVASGGLAGAGSLCFVYPLDFARTRLASDVGSGKRDFSGLWDCLSKTARGPKGVLGLYNGFGVSVMGIIPYRGVYFGLYDTGSAKNPWKADKGAAGMASKFAIAQATAITAGYASYPFDTVRRRLQMQSEKPKADWQYQGALDCLRKIIKEEGQGALFKGASANVLRTVGSAMVLVMYDQFKTVLNL 1239
M+ KK+SNFLVDFALGGVSGAIAKT TAPIERVKLI+QTQD+NPRIKSGE+ RYTGI+NCFTRV+QEQGLAAFWRGN TNVIRYFPTQAFNFAFKDQIKA+FPK +PK++F KFFAIN+ASGGLAGAGSLCFVYPLDFARTRLASDVGSGKRDF+GLWDCLSKTARGPKGVLGLYNGFGVSVMGIIPYRGVYFGLYDTGSAKNP+K D G GM SKFAIAQATAITAGYASYPFDTVRRRLQMQSEKP+++W YQGALDCL+KI+KEEG ALFKGASANVLRTVGSAMVLVMYDQFKT++ L
Sbjct: 1 MSSKKESNFLVDFALGGVSGAIAKTCTAPIERVKLIMQTQDANPRIKSGEVARYTGIVNCFTRVHQEQGLAAFWRGNTTNVIRYFPTQAFNFAFKDQIKALFPKVSPKDDFAKFFAINIASGGLAGAGSLCFVYPLDFARTRLASDVGSGKRDFTGLWDCLSKTARGPKGVLGLYNGFGVSVMGIIPYRGVYFGLYDTGSAKNPFKNDTGIKGMTSKFAIAQATAITAGYASYPFDTVRRRLQMQSEKPRSEWHYQGALDCLKKILKEEGNSALFKGASANVLRTVGSAMVLVMYDQFKTLMAL 304
BLAST of mRNA_H-paniculata_contig4136.10636.1 vs. uniprot
Match: A0A6H5JHM3_9PHAE (ADP/ATP translocase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHM3_9PHAE) HSP 1 Score: 504 bits (1297), Expect = 5.190e-171 Identity = 248/304 (81.58%), Postives = 266/304 (87.50%), Query Frame = 1
Query: 328 MADKKQSNFLVDFALGGVSGAIAKTATAPIERVKLILQTQDSNPRIKSGEIPRYTGILNCFTRVNQEQGLAAFWRGNMTNVIRYFPTQAFNFAFKDQIKAIFPKANPKENFWKFFAINVASGGLAGAGSLCFVYPLDFARTRLASDVGSGKRDFSGLWDCLSKTARGPKGVLGLYNGFGVSVMGIIPYRGVYFGLYDTGSAKNPWKADKGAAGMASKFAIAQATAITAGYASYPFDTVRRRLQMQSEKPKADWQYQGALDCLRKIIKEEGQGALFKGASANVLRTVGSAMVLVMYDQFKTVLNL 1239
MA+K QSNFLVDFALGGVSGA+AKT TAPIERVKLI+QTQD+NP+IKSGEI RY GI +CF+RV EQGL AFWRGNMTN+IRYFPTQAFNFAFKD IK +FPKANPK F KFF IN+ASGGLAGAGSLCFVYPLD+ARTRLASDVGSGKRDFSGLWDCLS+TA+GPKGV GLYNGFGVSVMGIIPYRGVYFGLYDT KNP+K DKGA G+ SKF IAQ AI +GYASYPFDT+RRRLQMQSEKP A W Y G DC KIIKEEG ALFKGA AN LRTVGSA+VLVMYDQ KTVLNL
Sbjct: 1 MAEKAQSNFLVDFALGGVSGAVAKTCTAPIERVKLIIQTQDANPKIKSGEIARYNGIGDCFSRVYSEQGLKAFWRGNMTNIIRYFPTQAFNFAFKDTIKGLFPKANPKTEFGKFFVINMASGGLAGAGSLCFVYPLDYARTRLASDVGSGKRDFSGLWDCLSRTAKGPKGVAGLYNGFGVSVMGIIPYRGVYFGLYDTFREKNPFKNDKGAKGLLSKFCIAQTVAIASGYASYPFDTIRRRLQMQSEKPPAQWLYNGTTDCFAKIIKEEGGAALFKGAGANALRTVGSALVLVMYDQMKTVLNL 304
BLAST of mRNA_H-paniculata_contig4136.10636.1 vs. uniprot
Match: A0A836CBW4_9STRA (ADP/ATP translocase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBW4_9STRA) HSP 1 Score: 492 bits (1266), Expect = 2.620e-166 Identity = 241/301 (80.07%), Postives = 262/301 (87.04%), Query Frame = 1
Query: 337 KKQSNFLVDFALGGVSGAIAKTATAPIERVKLILQTQDSNPRIKSGEIPRYTGILNCFTRVNQEQGLAAFWRGNMTNVIRYFPTQAFNFAFKDQIKAIFPKANPKENFWKFFAINVASGGLAGAGSLCFVYPLDFARTRLASDVGSGKRDFSGLWDCLSKTARGPKGVLGLYNGFGVSVMGIIPYRGVYFGLYDTGSAKNPWKADKGAAGMASKFAIAQATAITAGYASYPFDTVRRRLQMQSEKPKADWQYQGALDCLRKIIKEEGQGALFKGASANVLRTVGSAMVLVMYDQFKTVLNL 1239
KKQSNFL DFALGGVSGA+AKT TAPIERVKL++QTQD+NPRI+SGEIPRYTGI NCFTRV QEQG +AFWRGN TNVIRYFPTQAFNFAFKD IKA+FPK NPK F KFF IN+ASGGLAGAGSL VYPLD+ARTRLASDVG+GKRDF+GL DCL KTA GPKG+LGLYNGFGVSV GIIPYRGVYFGLYD+ KNP+K DKG G+ SKF IAQ AI AGYASYPFDTVRRRLQMQSEKPKADW Y +DC +KI K+EG GA FKGA AN LRTVGSA+VLVMYDQFKT+LN+
Sbjct: 6 KKQSNFLADFALGGVSGAVAKTCTAPIERVKLLIQTQDANPRIRSGEIPRYTGIGNCFTRVYQEQGFSAFWRGNFTNVIRYFPTQAFNFAFKDTIKAMFPKTNPKTEFGKFFLINMASGGLAGAGSLAIVYPLDYARTRLASDVGTGKRDFNGLADCLKKTASGPKGILGLYNGFGVSVTGIIPYRGVYFGLYDSAREKNPFKDDKGLMGVLSKFGIAQFVAIAAGYASYPFDTVRRRLQMQSEKPKADWIYANTMDCFKKIAKDEGTGAFFKGAGANALRTVGSALVLVMYDQFKTILNM 306
BLAST of mRNA_H-paniculata_contig4136.10636.1 vs. uniprot
Match: A8E615_XENLA (ADP/ATP translocase n=1 Tax=Xenopus laevis TaxID=8355 RepID=A8E615_XENLA) HSP 1 Score: 478 bits (1231), Expect = 4.710e-161 Identity = 234/302 (77.48%), Postives = 257/302 (85.10%), Query Frame = 1
Query: 334 DKKQSNFLVDFALGGVSGAIAKTATAPIERVKLILQTQDSNPRIKSGEIPRYTGILNCFTRVNQEQGLAAFWRGNMTNVIRYFPTQAFNFAFKDQIKAIFPKANPKENFWKFFAINVASGGLAGAGSLCFVYPLDFARTRLASDVGSGKRDFSGLWDCLSKTARGPKGVLGLYNGFGVSVMGIIPYRGVYFGLYDTGSAKNPWKADKGAAGMASKFAIAQATAITAGYASYPFDTVRRRLQMQSEKPKADWQYQGALDCLRKIIKEEGQGALFKGASANVLRTVGSAMVLVMYDQFKTVLNL 1239
D F+ DF LGGVSGAIAKTATAPIERVKLI+QTQDSNPRI SGE+PRYTGI NCFTRV QEQG AAFWRGN TN+IRYFPTQAFNFAFKD IK +FPK NPKE F KFF +N+ASGGLAGAGSLC VYPLD+ARTRLASDVGSG RDF+GL DCL KTARGPKG+LGLYNGFGVSV GIIPYRGVYFG+YD+ KNP+K D G G+ASKFA+AQ TAI AGYASYPFDT+RRRLQMQSEKPK W Y+G +DC KI+K EG A+FKGA AN LRTVGSAMVLV+YDQ K ++NL
Sbjct: 4 DANAMGFVTDFLLGGVSGAIAKTATAPIERVKLIIQTQDSNPRIISGEVPRYTGIGNCFTRVYQEQGFAAFWRGNFTNIIRYFPTQAFNFAFKDTIKKLFPKVNPKEEFGKFFLVNMASGGLAGAGSLCIVYPLDYARTRLASDVGSGARDFNGLGDCLVKTARGPKGILGLYNGFGVSVAGIIPYRGVYFGMYDSLREKNPYKKDTGIIGLASKFAVAQFTAICAGYASYPFDTIRRRLQMQSEKPKEQWLYKGTVDCFGKIMKNEGVTAMFKGAGANALRTVGSAMVLVLYDQLKAIMNL 305
BLAST of mRNA_H-paniculata_contig4136.10636.1 vs. uniprot
Match: F2DZ59_HORVV (ADP/ATP translocase n=1 Tax=Hordeum vulgare subsp. vulgare TaxID=112509 RepID=F2DZ59_HORVV) HSP 1 Score: 467 bits (1201), Expect = 4.510e-156 Identity = 225/296 (76.01%), Postives = 255/296 (86.15%), Query Frame = 1
Query: 352 FLVDFALGGVSGAIAKTATAPIERVKLILQTQDSNPRIKSGEIPRYTGILNCFTRVNQEQGLAAFWRGNMTNVIRYFPTQAFNFAFKDQIKAIFPKANPKENFWKFFAINVASGGLAGAGSLCFVYPLDFARTRLASDVGSGKRDFSGLWDCLSKTARGPKGVLGLYNGFGVSVMGIIPYRGVYFGLYDTGSAKNPWKADKGAAGMASKFAIAQATAITAGYASYPFDTVRRRLQMQSEKPKADWQYQGALDCLRKIIKEEGQGALFKGASANVLRTVGSAMVLVMYDQFKTVLNL 1239
F DFA+GGVSGA+AKT TAPIERVKLI+QTQD+NPRI+SGE+PRYTGI+NCF+RV +EQG AFWRGN TNVIRYFPTQAFNFAFKD IK +FP+ +PK+ F FF + +ASGGLAGAGSLC VYPLD+ARTRLASDVG+GKRDF GL DCL KTARGP+GVLGLYNGFGVSV GIIPYRGVYFGLYD+ KNP+K D G GMASKFA+AQ TAI AGYASYPFDTVRRRLQMQSEKPK W Y+ ++DCL K+IKEEG ALFKGA AN LRTVGSA+VLV+YDQ + +L +
Sbjct: 33 FATDFAIGGVSGAVAKTLTAPIERVKLIIQTQDANPRIRSGEVPRYTGIVNCFSRVTKEQGFMAFWRGNFTNVIRYFPTQAFNFAFKDSIKKLFPRYDPKKEFGMFFLVQMASGGLAGAGSLCIVYPLDYARTRLASDVGTGKRDFKGLGDCLVKTARGPRGVLGLYNGFGVSVAGIIPYRGVYFGLYDSLREKNPYKNDFGVMGMASKFAVAQTTAIAAGYASYPFDTVRRRLQMQSEKPKEQWVYKSSMDCLTKVIKEEGMSALFKGAGANALRTVGSALVLVLYDQLQGILGI 328
BLAST of mRNA_H-paniculata_contig4136.10636.1 vs. uniprot
Match: F2E4J1_HORVV (ADP/ATP translocase n=1 Tax=Hordeum vulgare subsp. vulgare TaxID=112509 RepID=F2E4J1_HORVV) HSP 1 Score: 462 bits (1189), Expect = 1.350e-154 Identity = 226/299 (75.59%), Postives = 254/299 (84.95%), Query Frame = 1
Query: 346 SNFLVDFALGGVSGAIAKTATAPIERVKLILQTQDSNPRIKSGEIPRYTGILNCFTRVNQEQGLAAFWRGNMTNVIRYFPTQAFNFAFKDQIKAIFPKANPKENFWKFFAINVASGGLAGAGSLCFVYPLDFARTRLASDVGSGKRDFSGLWDCLSKTARGPKGVLGLYNGFGVSVMGIIPYRGVYFGLYDTGSAKNPWKADKGAAGMASKFAIAQATAITAGYASYPFDTVRRRLQMQSEKPKADWQYQGALDCLRKIIKEEGQGALFKGASANVLRTVGSAMVLVMYDQFKTVLNLK 1242
S+FLVDFA GG+SGA+AKTATAPIERVKLI+QTQD+NP IKSG++ RYTGI NCFTRV QEQGLAAFWRGN TNVIRYFPTQAFNFAFKD IK +FPK +PK+ F FF N+ASGGLAGAGSLC VYPLD+ARTRLASDVG G + F+GL DCL KTARGP G+LGLYNGFGVSV GIIPYRGVYFG+YD NP+K +KG G+ASKFAIAQATAITAGYASYPFDT+RRRLQMQSEKPK +W Y+G DC KI+K EG ALFKGA AN LRTVGSA+VLV+Y + KT+L +
Sbjct: 10 SSFLVDFAAGGISGAVAKTATAPIERVKLIIQTQDANPLIKSGKVARYTGIGNCFTRVYQEQGLAAFWRGNFTNVIRYFPTQAFNFAFKDTIKGMFPKYSPKKEFGMFFLTNMASGGLAGAGSLCIVYPLDYARTRLASDVGKGHKSFNGLADCLIKTARGPSGILGLYNGFGVSVAGIIPYRGVYFGMYDXXXXXNPFKNEKGIIGLASKFAIAQATAITAGYASYPFDTIRRRLQMQSEKPKEEWLYKGTADCFNKIVKNEGTSALFKGAGANALRTVGSALVLVLYGEIKTMLGFE 308
BLAST of mRNA_H-paniculata_contig4136.10636.1 vs. uniprot
Match: A0A061QXY6_9CHLO (ADP/ATP translocase n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061QXY6_9CHLO) HSP 1 Score: 461 bits (1185), Expect = 7.210e-154 Identity = 227/305 (74.43%), Postives = 255/305 (83.61%), Query Frame = 1
Query: 319 STTMADKKQSNFLVDFALGGVSGAIAKTATAPIERVKLILQTQDSNPRIKSGEIPRYTGILNCFTRVNQEQGLAAFWRGNMTNVIRYFPTQAFNFAFKDQIKAIFPKANPKENFWKFFAINVASGGLAGAGSLCFVYPLDFARTRLASDVGSGKRDFSGLWDCLSKTARGPKGVLGLYNGFGVSVMGIIPYRGVYFGLYDTGSAKNPWKADKGAAGMASKFAIAQATAITAGYASYPFDTVRRRLQMQSEKPKADWQYQGALDCLRKIIKEEGQGALFKGASANVLRTVGSAMVLVMYDQFKTVL 1233
+T+ + FL DF LGGVSGAIAKT TAPIERVKLI+QTQD+NPRI SGE+PRYTGI NCF RV EQGL+AFWRGN TN IRYFPTQAFNFAFKD IK +FPKA+PKE F KFFAIN+ASGGLAGAGSLC VYPLD+ARTRLASDVG+GK F+GL DCL KTARGP G+ GLYNGFGVSV+GIIPYRGVYFG+YD+ KNP+K D G G+ SKFA+AQ TAITAGYASYPFDTVRRRLQMQSEKP+++W Y G DC K+ K EG GALFKGA AN LRTVGSA+VLV+YDQ + +L
Sbjct: 3 ATSKSTDNALAFLKDFTLGGVSGAIAKTCTAPIERVKLIIQTQDANPRIISGEVPRYTGIGNCFVRVYSEQGLSAFWRGNFTNCIRYFPTQAFNFAFKDSIKKLFPKADPKEEFVKFFAINMASGGLAGAGSLCLVYPLDYARTRLASDVGAGKSTFNGLGDCLVKTARGPGGIRGLYNGFGVSVVGIIPYRGVYFGMYDSLREKNPYKKDLGPLGVISKFAVAQVTAITAGYASYPFDTVRRRLQMQSEKPRSEWMYSGTADCFAKVAKNEGIGALFKGAGANALRTVGSALVLVLYDQLQGML 307
BLAST of mRNA_H-paniculata_contig4136.10636.1 vs. uniprot
Match: A0A6A5B5S1_NAEFO (ADP/ATP translocase n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5B5S1_NAEFO) HSP 1 Score: 458 bits (1178), Expect = 6.320e-153 Identity = 225/296 (76.01%), Postives = 251/296 (84.80%), Query Frame = 1
Query: 352 FLVDFALGGVSGAIAKTATAPIERVKLILQTQDSNPRIKSGEIPRYTGILNCFTRVNQEQGLAAFWRGNMTNVIRYFPTQAFNFAFKDQIKAIFPKANPKENFWKFFAINVASGGLAGAGSLCFVYPLDFARTRLASDVGSGKRDFSGLWDCLSKTARGPKGVLGLYNGFGVSVMGIIPYRGVYFGLYDTGSAKNPWKADKGAAGMASKFAIAQATAITAGYASYPFDTVRRRLQMQSEKPKADWQYQGALDCLRKIIKEEGQGALFKGASANVLRTVGSAMVLVMYDQFKTVLNL 1239
F+ DFALGGVSGA+AKT TAPIERVKL++QTQD+NPRI+SGEIPRYTGI+NCFTRV EQG+AAFWRGN TNVIRYFPTQAFNFAFKD IK +FPK +PKE F KFF + +ASGGLAGAGSLC VYPLD+ARTRLASDVG RDF GL DCL KTARGP+GVLGLYNGFGVSV GIIPYRGVYFGLYD+ KNP+K D G G+ SKF +AQ TAI AGYASYPFDTVRRRLQMQSEKPK W Y+G DC KI+KEEG A+FKGA AN LRTVGSA+VLV+YDQ + +L +
Sbjct: 14 FVRDFALGGVSGAVAKTLTAPIERVKLLIQTQDANPRIRSGEIPRYTGIVNCFTRVASEQGIAAFWRGNFTNVIRYFPTQAFNFAFKDSIKKLFPKYSPKEEFGKFFLVQMASGGLAGAGSLCIVYPLDYARTRLASDVGKN-RDFKGLGDCLVKTARGPRGVLGLYNGFGVSVAGIIPYRGVYFGLYDSLREKNPYKNDLGVLGVVSKFVVAQTTAIAAGYASYPFDTVRRRLQMQSEKPKEQWIYKGTADCFTKILKEEGMNAMFKGAGANALRTVGSALVLVLYDQMQGLLGV 308
BLAST of mRNA_H-paniculata_contig4136.10636.1 vs. uniprot
Match: A0A482RRH8_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RRH8_9ARCH) HSP 1 Score: 457 bits (1175), Expect = 1.720e-152 Identity = 221/297 (74.41%), Postives = 254/297 (85.52%), Query Frame = 1
Query: 352 FLVDFALGGVSGAIAKTATAPIERVKLILQTQDSNPRIKSGEIPRYTGILNCFTRVNQEQGLAAFWRGNMTNVIRYFPTQAFNFAFKDQIKAIFPKANPKENFWKFFAINVASGGLAGAGSLCFVYPLDFARTRLASDVGSGKRDFSGLWDCLSKTARGPKGVLGLYNGFGVSVMGIIPYRGVYFGLYDTGSAKNPWKADKGAAGMASKFAIAQATAITAGYASYPFDTVRRRLQMQSEKPKADWQYQGALDCLRKIIKEEGQGALFKGASANVLRTVGSAMVLVMYDQFKTVLNLK 1242
FLVDFA GG+SGA+AKTATAPIERVKLI+QTQD+NP IKSG++PRYTGI+NCFTRV EQG AAFWRGN TNVIRYFPTQAFNFAFKDQIK+ FP+ +PK +F FF N+ASGGLAGAGSLC VYPLD+ARTRLASDVGSG+R F+GL DCL KTA+GP G++GLYNGFGVSV GIIPYRGVYFG++D ++ + G G+ASKFAIAQATAITAGYASYPFDT+RRRLQMQSEKPKA+W Y G +DCL KI+KEEG ALFKGA AN LRTVGSAMVLV+Y + K ++ +
Sbjct: 12 FLVDFAAGGISGAVAKTATAPIERVKLIIQTQDANPLIKSGKVPRYTGIVNCFTRVQAEQGFAAFWRGNFTNVIRYFPTQAFNFAFKDQIKSFFPRYSPKTDFGMFFLTNMASGGLAGAGSLCIVYPLDYARTRLASDVGSGQRTFNGLADCLVKTAKGPSGIMGLYNGFGVSVAGIIPYRGVYFGMFDXXXXXXXFRNEPGIVGLASKFAIAQATAITAGYASYPFDTIRRRLQMQSEKPKAEWIYSGTMDCLTKIMKEEGTSALFKGAGANALRTVGSAMVLVLYGEIKAMMGFE 308
BLAST of mRNA_H-paniculata_contig4136.10636.1 vs. uniprot
Match: A0A7R9YM42_DIALT (ADP/ATP translocase n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9YM42_DIALT) HSP 1 Score: 456 bits (1172), Expect = 1.690e-151 Identity = 218/296 (73.65%), Postives = 255/296 (86.15%), Query Frame = 1
Query: 352 FLVDFALGGVSGAIAKTATAPIERVKLILQTQDSNPRIKSGEIPRYTGILNCFTRVNQEQGLAAFWRGNMTNVIRYFPTQAFNFAFKDQIKAIFPKANPKENFWKFFAINVASGGLAGAGSLCFVYPLDFARTRLASDVGSGKRDFSGLWDCLSKTARGPKGVLGLYNGFGVSVMGIIPYRGVYFGLYDTGSAKNPWKADKGAAGMASKFAIAQATAITAGYASYPFDTVRRRLQMQSEKPKADWQYQGALDCLRKIIKEEGQGALFKGASANVLRTVGSAMVLVMYDQFKTVLNL 1239
F+ DF +GGVSGA+AKT TAPIERVKL++QTQD+NP+I SGE+ RYTGI +CF RV +EQG+ AFWRGN+TNVIRYFPTQAFNFAFKD IKA+FPKANPK FW +FAIN+ASGGLAGAGSLC VYPLD+ARTRLASDVGSGK F+GL DCL KTA GP G++GLYNGFGVSV+GIIPYRGVYFGL+DT KNP+K + G G+ASKFAIAQA AITAGYASYPFDT+RRRLQMQSEKP+ W Y+G +DC KI+ EG GA+FKGA AN +RTVGSA+VLV+YD+ K +++L
Sbjct: 54 FITDFLIGGVSGAVAKTCTAPIERVKLLIQTQDANPKIISGEVKRYTGITDCFVRVYREQGMGAFWRGNVTNVIRYFPTQAFNFAFKDLIKALFPKANPKTEFWTYFAINMASGGLAGAGSLCVVYPLDYARTRLASDVGSGKAQFNGLVDCLVKTAAGPAGIMGLYNGFGVSVIGIIPYRGVYFGLFDTLKEKNPFKKEHGVLGIASKFAIAQAVAITAGYASYPFDTIRRRLQMQSEKPRDQWLYKGTVDCAVKIMANEGLGAMFKGAGANAIRTVGSALVLVLYDEIKHLISL 349 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4136.10636.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4136.10636.1 >prot_H-paniculata_contig4136.10636.1 ID=prot_H-paniculata_contig4136.10636.1|Name=mRNA_H-paniculata_contig4136.10636.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=306bp MADKKQSNFLVDFALGGVSGAIAKTATAPIERVKLILQTQDSNPRIKSGEback to top mRNA from alignment at H-paniculata_contig4136:1589..6639- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4136.10636.1 ID=mRNA_H-paniculata_contig4136.10636.1|Name=mRNA_H-paniculata_contig4136.10636.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5051bp|location=Sequence derived from alignment at H-paniculata_contig4136:1589..6639- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4136:1589..6639- >mRNA_H-paniculata_contig4136.10636.1 ID=mRNA_H-paniculata_contig4136.10636.1|Name=mRNA_H-paniculata_contig4136.10636.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1836bp|location=Sequence derived from alignment at H-paniculata_contig4136:1589..6639- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |