mRNA_H-paniculata_contig41147.10600.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig41147.10600.1
Unique NamemRNA_H-paniculata_contig41147.10600.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig41147.10600.1 vs. uniprot
Match: A0A6H5KZU9_9PHAE (Protein O-GlcNAc transferase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZU9_9PHAE)

HSP 1 Score: 131 bits (330), Expect = 2.550e-33
Identity = 64/75 (85.33%), Postives = 72/75 (96.00%), Query Frame = 1
Query:  106 VHSLVFVCDWSNRDNEFSALKEMLAAQLAADNVLPSVQPFHAMAYPLSLAEMQQISRQYAQRVKMNVALLEMPSF 330
            VHSLVFVCDWSNRDN+F+ALK+MLA Q+A +NVLPSVQPFHAMAYPLSLAEMQQIS +YA+RVKMNVALLEMP+F
Sbjct:  531 VHSLVFVCDWSNRDNDFAALKKMLATQMATENVLPSVQPFHAMAYPLSLAEMQQISCKYAERVKMNVALLEMPAF 605          
BLAST of mRNA_H-paniculata_contig41147.10600.1 vs. uniprot
Match: A0A8K1FGH6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FGH6_PYTOL)

HSP 1 Score: 92.0 bits (227), Expect = 1.990e-19
Identity = 42/73 (57.53%), Postives = 56/73 (76.71%), Query Frame = 1
Query:  109 HSLVFVCDWSNRDNEFSALKEMLAAQLAADNVLPSVQPFHAMAYPLSLAEMQQISRQYAQRVKMNVALLEMPS 327
            HS++F+CDW +R+ +   L + L AQLA DNVLPSVQPFHA+ YPLS+     ISR+YA+R K+NV+L+E PS
Sbjct:  489 HSMLFICDWQSREGDLKKLVQFLDAQLAMDNVLPSVQPFHALVYPLSMQCFLDISRRYAERAKLNVSLVEAPS 561          
BLAST of mRNA_H-paniculata_contig41147.10600.1 vs. uniprot
Match: A0A7J7IAX2_CAMSI (Uncharacterized protein n=4 Tax=Camellia sinensis TaxID=4442 RepID=A0A7J7IAX2_CAMSI)

HSP 1 Score: 90.1 bits (222), Expect = 8.420e-19
Identity = 48/105 (45.71%), Postives = 67/105 (63.81%), Query Frame = 1
Query:   16 QEGGDVPQAIAYYRKALELRPNFPDAFANLVHSLVFVCDWSNRDNEFSALKEMLAAQLAADNVLPSVQPFHAMAYPLSLAEMQQISRQYAQRVKMNVALLEMPSF 330
            ++ G V  AI  Y++AL LRP+FP+A  NL+H+L  VCDW  RD  F  ++ +L  Q+   +V+PSVQPFHA+AYPL      +ISR+YA    +  A   +PSF
Sbjct:   13 KDSGHVDAAIKSYKQALVLRPDFPEATCNLLHTLQCVCDWDVRDKMFIEVEGILRRQIKM-SVIPSVQPFHAIAYPLDPVLALEISRKYASHCSVIAARYSLPSF 116          
BLAST of mRNA_H-paniculata_contig41147.10600.1 vs. uniprot
Match: A0A5D6YVI5_9STRA (Protein O-GlcNAc transferase (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YVI5_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 1.710e-18
Identity = 41/73 (56.16%), Postives = 55/73 (75.34%), Query Frame = 1
Query:  109 HSLVFVCDWSNRDNEFSALKEMLAAQLAADNVLPSVQPFHAMAYPLSLAEMQQISRQYAQRVKMNVALLEMPS 327
            H+++FVCDW  RD + + L   L AQLA D VLPSVQPFHA+ YPLSL     I+R+YA+R K+NV+L+E+P+
Sbjct:  475 HAMMFVCDWRRRDADLAQLLAFLDAQLALDRVLPSVQPFHALVYPLSLQRFLDIARRYAERAKLNVSLVELPA 547          
BLAST of mRNA_H-paniculata_contig41147.10600.1 vs. uniprot
Match: A0A3R7HUL3_9STRA (Protein O-GlcNAc transferase n=4 Tax=Phytophthora TaxID=4783 RepID=A0A3R7HUL3_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 1.760e-18
Identity = 39/72 (54.17%), Postives = 54/72 (75.00%), Query Frame = 1
Query:  109 HSLVFVCDWSNRDNEFSALKEMLAAQLAADNVLPSVQPFHAMAYPLSLAEMQQISRQYAQRVKMNVALLEMP 324
            HS+VF+CDW +R  +   L+  L  QL+ D VLPSVQPFHA+ YPLS+   Q ISR+YA+R K+NV+L+++P
Sbjct:  422 HSMVFICDWQSRKQDTEVLQRFLDEQLSMDGVLPSVQPFHALVYPLSMQRFQDISRRYAERAKLNVSLVDLP 493          
BLAST of mRNA_H-paniculata_contig41147.10600.1 vs. uniprot
Match: A0A0W8DU52_PHYNI (Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY n=20 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DU52_PHYNI)

HSP 1 Score: 89.0 bits (219), Expect = 2.400e-18
Identity = 38/72 (52.78%), Postives = 55/72 (76.39%), Query Frame = 1
Query:  109 HSLVFVCDWSNRDNEFSALKEMLAAQLAADNVLPSVQPFHAMAYPLSLAEMQQISRQYAQRVKMNVALLEMP 324
            HS+VF+CDW +R  +   L+  +  QL+ D+VLPSVQPFHA+ YPLS+   Q ISR+YA+R K+NV+L+++P
Sbjct:  480 HSMVFICDWQSRKQDTETLQRFVDEQLSVDDVLPSVQPFHALVYPLSMQRFQDISRRYAERAKLNVSLVDLP 551          
BLAST of mRNA_H-paniculata_contig41147.10600.1 vs. uniprot
Match: A0A835ZDI7_9STRA (Protein O-GlcNAc transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDI7_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 1.130e-17
Identity = 44/85 (51.76%), Postives = 58/85 (68.24%), Query Frame = 1
Query:  106 VHSLVFVCDWSNRDNEFSALKEMLAAQLAADNV----------LPSVQPFHAMAYPLSLAEMQQISRQYAQRVKMNVALLEMPSF 330
            VHSL F+CDWS RD +F+ L  ++  Q+AA             LPSVQPFHA+ YPL LA+M +ISR+YAQR ++NV LL++P F
Sbjct:  446 VHSLNFICDWSTRDADFAQLTAIIRRQVAAPAADAADTAVAAALPSVQPFHALVYPLGLADMLEISRRYAQRARLNVRLLDLPPF 530          
BLAST of mRNA_H-paniculata_contig41147.10600.1 vs. uniprot
Match: A0A8C3AAF3_CYCLU (UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit n=1 Tax=Cyclopterus lumpus TaxID=8103 RepID=A0A8C3AAF3_CYCLU)

HSP 1 Score: 86.7 bits (213), Expect = 1.550e-17
Identity = 44/104 (42.31%), Postives = 64/104 (61.54%), Query Frame = 1
Query:   19 EGGDVPQAIAYYRKALELRPNFPDAFANLVHSLVFVCDWSNRDNEFSALKEMLAAQLAADNVLPSVQPFHAMAYPLSLAEMQQISRQYAQRVKMNVALLEMPSF 330
            + G++P+AIA YR AL+L+P+FPDA+ NL H L  VCDW++ D     L  ++A QL   N LPSV P H+M YPLS    + I+ ++    +  +  L  P+F
Sbjct:  377 DSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVADQLDK-NRLPSVHPHHSMLYPLSHGFRKAIAERHGNLCQDKINALHKPAF 479          
BLAST of mRNA_H-paniculata_contig41147.10600.1 vs. uniprot
Match: A0A2D4BUC4_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BUC4_PYTIN)

HSP 1 Score: 86.7 bits (213), Expect = 1.560e-17
Identity = 37/73 (50.68%), Postives = 53/73 (72.60%), Query Frame = 1
Query:  109 HSLVFVCDWSNRDNEFSALKEMLAAQLAADNVLPSVQPFHAMAYPLSLAEMQQISRQYAQRVKMNVALLEMPS 327
            HS+VF+CDW +R+ +       + AQLA DN LPSVQPFHA+ YPLS+     + R+YA+R K+NV+L+E+P+
Sbjct:  497 HSMVFICDWQSREEDLKRXMAFVDAQLAVDNTLPSVQPFHALVYPLSMQRFLDLCRRYAERAKLNVSLVEIPA 569          
BLAST of mRNA_H-paniculata_contig41147.10600.1 vs. uniprot
Match: M4BYK0_HYAAE (Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BYK0_HYAAE)

HSP 1 Score: 86.3 bits (212), Expect = 2.120e-17
Identity = 37/72 (51.39%), Postives = 54/72 (75.00%), Query Frame = 1
Query:  109 HSLVFVCDWSNRDNEFSALKEMLAAQLAADNVLPSVQPFHAMAYPLSLAEMQQISRQYAQRVKMNVALLEMP 324
            HS+VF+CDW +R  +   L+  +  QL+ + VLPSVQPFHA+ YPLS+   Q ISR+YA+R K+NV+L+++P
Sbjct:  485 HSMVFICDWQSRTQDTEMLQRFVDEQLSMEGVLPSVQPFHALVYPLSMQRFQDISRRYAERAKLNVSLVDLP 556          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig41147.10600.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZU9_9PHAE2.550e-3385.33Protein O-GlcNAc transferase n=2 Tax=Ectocarpus Ta... [more]
A0A8K1FGH6_PYTOL1.990e-1957.53Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7J7IAX2_CAMSI8.420e-1945.71Uncharacterized protein n=4 Tax=Camellia sinensis ... [more]
A0A5D6YVI5_9STRA1.710e-1856.16Protein O-GlcNAc transferase (Fragment) n=1 Tax=Py... [more]
A0A3R7HUL3_9STRA1.760e-1854.17Protein O-GlcNAc transferase n=4 Tax=Phytophthora ... [more]
A0A0W8DU52_PHYNI2.400e-1852.78Probable UDP-N-acetylglucosamine--peptide N-acetyl... [more]
A0A835ZDI7_9STRA1.130e-1751.76Protein O-GlcNAc transferase n=1 Tax=Tribonema min... [more]
A0A8C3AAF3_CYCLU1.550e-1742.31UDP-N-acetylglucosamine--peptide N-acetylglucosami... [more]
A0A2D4BUC4_PYTIN1.560e-1750.68Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
M4BYK0_HYAAE2.120e-1751.39Probable UDP-N-acetylglucosamine--peptide N-acetyl... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig41147contigH-paniculata_contig41147:284..1101 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score130.6
Seed ortholog evalue4.6e-28
Seed eggNOG ortholog2880.D7FX68
KEGG rclassRC00005,RC00059
KEGG koko:K09667
KEGG ReactionR09304,R09676
KEGG Pathwayko00514,ko04931,map00514,map04931
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0006464,GO:0006486,GO:0006493,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009987,GO:0016740,GO:0016757,GO:0019538,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0070085,GO:0071704,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.protein N-acetylglucosaminyltransferase activity
EggNOG OGsCOG3914@1,KOG4626@2759
EC2.4.1.255
COG Functional cat.O
CAZyGT41
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01003,ko03036
Exons2
Model size330
Cds size330
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930256.6498168-CDS-H-paniculata_contig41147:283..4691622930256.6498168-CDS-H-paniculata_contig41147:283..469Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig41147 284..469 +
1691481213.0225482-CDS-H-paniculata_contig41147:283..4691691481213.0225482-CDS-H-paniculata_contig41147:283..469Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig41147 284..469 +
1622930256.6656446-CDS-H-paniculata_contig41147:957..11011622930256.6656446-CDS-H-paniculata_contig41147:957..1101Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig41147 958..1101 +
1691481213.035573-CDS-H-paniculata_contig41147:957..11011691481213.035573-CDS-H-paniculata_contig41147:957..1101Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig41147 958..1101 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig41147.10600.1prot_H-paniculata_contig41147.10600.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig41147 284..1101 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig41147.10600.1

>prot_H-paniculata_contig41147.10600.1 ID=prot_H-paniculata_contig41147.10600.1|Name=mRNA_H-paniculata_contig41147.10600.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=110bp
VFCFVQEGGDVPQAIAYYRKALELRPNFPDAFANLVHSLVFVCDWSNRDN
EFSALKEMLAAQLAADNVLPSVQPFHAMAYPLSLAEMQQISRQYAQRVKM
NVALLEMPSF
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mRNA from alignment at H-paniculata_contig41147:284..1101+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig41147.10600.1 ID=mRNA_H-paniculata_contig41147.10600.1|Name=mRNA_H-paniculata_contig41147.10600.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=818bp|location=Sequence derived from alignment at H-paniculata_contig41147:284..1101+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTGTTCTGCTTTGTGCAGGAGGGAGGTGACGTGCCGCAGGCCATCGCGTA CTACCGCAAGGCGTTGGAGCTGAGGCCTAACTTCCCCGACGCCTTTGCTA ACTTGGTGCACTCGCTGGTCTTTGTGTGCGACTGGTCCAACCGTGACAAT GAGTTTTCCGCCCTCAAGGAAATGTTGGCAGCTCAGGTATGACTCCAATT TTGAATAAATCCCCTCTCCCCCCCTATAACTACGGCATGCAAACATGAGT ACCTTCCACCCTCCGGTCCGCCGGCAAAGGTTTGTGCGTGCTAGTGTATG TCTTTAGTGTCTTCAGGTTTGGTTGAAGGTATGTGAAAGCTATCTGTTGA TTGTGACAAAAGTTGTGAGTGCCCCCCCCCCCCCGCCCATCGATGTGATA TATTTTTGTAGATGTGTGTTTCCGAATTGATCTTAGAGGTTAGTTGCATA GCCTCAACAGGGATACATTGAATTTGTAATATGAGTTGTATGCAGCTAAC TGTCATAAGTGCGTCCGCCTCTGTCCCCCCTGCTATATGCGCACACCCCA TGCCCCCGCTCCTGTTAAATGCGCAATCCCCCCCCCCCCCACTGTCCTTC TCCGGCGTCCTCTCCATCATTATTTGCTGTTTTTTTACGTCATGGTCTTT CATGGCGTGGTGATTTTATTGCAGCTGGCGGCGGACAACGTGCTTCCGTC GGTCCAGCCGTTCCACGCGATGGCGTATCCTCTGTCCCTCGCCGAGATGC AGCAGATCAGCCGGCAGTACGCACAGCGCGTGAAAATGAATGTGGCTCTG TTGGAGATGCCGTCGTTC
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Coding sequence (CDS) from alignment at H-paniculata_contig41147:284..1101+

>mRNA_H-paniculata_contig41147.10600.1 ID=mRNA_H-paniculata_contig41147.10600.1|Name=mRNA_H-paniculata_contig41147.10600.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=660bp|location=Sequence derived from alignment at H-paniculata_contig41147:284..1101+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTGTTCTGCTTTGTGCAGGAGGGAGGTGACGTGCCGCAGGCCATCGCGTA
CTACCGCAAGGCGTTGGAGCTGAGGCCTAACTTCCCCGACGCCTTTGCTA
ACTTGGTGCACTCGCTGGTCTTTGTGTGCGACTGGTCCAACCGTGACAAT
GAGTTTTCCGCCCTCAAGGAAATGTTGGCAGCTCAGGTGTTCTGCTTTGT
GCAGGAGGGAGGTGACGTGCCGCAGGCCATCGCGTACTACCGCAAGGCGT
TGGAGCTGAGGCCTAACTTCCCCGACGCCTTTGCTAACTTGGTGCACTCG
CTGGTCTTTGTGTGCGACTGGTCCAACCGTGACAATGAGTTTTCCGCCCT
CAAGGAAATGTTGGCAGCTCAGCTGGCGGCGGACAACGTGCTTCCGTCGG
TCCAGCCGTTCCACGCGATGGCGTATCCTCTGTCCCTCGCCGAGATGCAG
CAGATCAGCCGGCAGTACGCACAGCGCGTGAAAATGAATGTGGCTCTGTT
GGAGATGCCGTCGTTCCTGGCGGCGGACAACGTGCTTCCGTCGGTCCAGC
CGTTCCACGCGATGGCGTATCCTCTGTCCCTCGCCGAGATGCAGCAGATC
AGCCGGCAGTACGCACAGCGCGTGAAAATGAATGTGGCTCTGTTGGAGAT
GCCGTCGTTC
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