mRNA_H-paniculata_contig4113.10596.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4113.10596.1 vs. uniprot
Match: A0A836CJD4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJD4_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 7.140e-16 Identity = 38/80 (47.50%), Postives = 57/80 (71.25%), Query Frame = 3
Query: 78 PTISASVVKKLLQVHWDKDKGAEKP--KINPDALKLTAEYLRRFVIEAYQRAQLEAQLENDDVLEPEHIERIMVGMMLDF 311
P+ S++K LL+ HW++ E+ KI+ DA+K+ AEYLR F++E+Y+RA EA+L DD+L PEH+E+ M G+ LDF
Sbjct: 29 PSFKPSLIKALLKHHWEQQATDEEKATKISADAVKMVAEYLRMFIVESYKRASFEARLNGDDILSPEHLEKAMAGIFLDF 108
BLAST of mRNA_H-paniculata_contig4113.10596.1 vs. uniprot
Match: A0A6S9HFL9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9HFL9_HETAK) HSP 1 Score: 73.6 bits (179), Expect = 3.530e-13 Identity = 38/81 (46.91%), Postives = 60/81 (74.07%), Query Frame = 3
Query: 69 QQQPTISASVVKKLLQVHWDKDKGAEKPKINPDALKLTAEYLRRFVIEAYQRAQLEAQLENDDVLEPEHIERIMVGMMLDF 311
QQ+P+I+ ++V+ L Q W EK +I+ +AL+L+AEYLR FV+EA +RAQ EA L+ +D + PEHIE++++ ++LDF
Sbjct: 50 QQRPSINPALVQHLFQKAW-----GEKVRISSEALQLSAEYLRYFVVEAVKRAQYEAALDGEDEVSPEHIEKVLLTLLLDF 125
BLAST of mRNA_H-paniculata_contig4113.10596.1 vs. uniprot
Match: A0A662XE10_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XE10_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 5.090e-9 Identity = 28/53 (52.83%), Postives = 43/53 (81.13%), Query Frame = 3
Query: 153 KINPDALKLTAEYLRRFVIEAYQRAQLEAQLENDDVLEPEHIERIMVGMMLDF 311
KI+PDA+KL++EYLR FV+EA RAQ+EA +++ +EP H+E+I+ ++LDF
Sbjct: 56 KIHPDAVKLSSEYLRLFVVEALHRAQMEATVDDSPTVEPHHLEQILAQLLLDF 108
BLAST of mRNA_H-paniculata_contig4113.10596.1 vs. uniprot
Match: K3X8K5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X8K5_GLOUD) HSP 1 Score: 61.6 bits (148), Expect = 1.030e-8 Identity = 28/53 (52.83%), Postives = 42/53 (79.25%), Query Frame = 3
Query: 153 KINPDALKLTAEYLRRFVIEAYQRAQLEAQLENDDVLEPEHIERIMVGMMLDF 311
KIN DALKL++E LR FV+EA+ RAQ+EA +++ +EP H+E+I+ ++LDF
Sbjct: 72 KINQDALKLSSELLRLFVVEAFHRAQMEAMVDDSPTIEPHHVEQILAQLLLDF 124
BLAST of mRNA_H-paniculata_contig4113.10596.1 vs. uniprot
Match: H3GXK2_PHYRM (Uncharacterized protein n=8 Tax=Phytophthora TaxID=4783 RepID=H3GXK2_PHYRM) HSP 1 Score: 60.8 bits (146), Expect = 1.440e-8 Identity = 27/53 (50.94%), Postives = 45/53 (84.91%), Query Frame = 3
Query: 153 KINPDALKLTAEYLRRFVIEAYQRAQLEAQLENDDVLEPEHIERIMVGMMLDF 311
KI+ DA+KL+AE LR FV+EA++RAQ+EA +++ + +EP+H+E+I+ ++LDF
Sbjct: 58 KIHADAVKLSAEMLRLFVVEAFRRAQMEAMVDDSEKVEPQHVEQILAQLLLDF 110
BLAST of mRNA_H-paniculata_contig4113.10596.1 vs. uniprot
Match: A0A484EF96_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EF96_BRELC) HSP 1 Score: 60.5 bits (145), Expect = 1.820e-8 Identity = 29/53 (54.72%), Postives = 44/53 (83.02%), Query Frame = 3
Query: 153 KINPDALKLTAEYLRRFVIEAYQRAQLEAQLENDDVLEPEHIERIMVGMMLDF 311
KI+ DA+KL+AE LR FVIEA +RAQ+EA +++ + +EP+HIE+I+ ++LDF
Sbjct: 54 KIHADAVKLSAEMLRLFVIEACRRAQMEAMVDDSETVEPQHIEQILAQLLLDF 106
BLAST of mRNA_H-paniculata_contig4113.10596.1 vs. uniprot
Match: A0A8K1FSI2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FSI2_PYTOL) HSP 1 Score: 60.5 bits (145), Expect = 2.050e-8 Identity = 26/53 (49.06%), Postives = 43/53 (81.13%), Query Frame = 3
Query: 153 KINPDALKLTAEYLRRFVIEAYQRAQLEAQLENDDVLEPEHIERIMVGMMLDF 311
KIN DALK+++E+LR F+IEA +RAQ+EA +++ +EP H+E+++ ++LDF
Sbjct: 59 KINADALKMSSEFLRLFIIEALRRAQMEAMVDDSATIEPHHVEQVLAQLLLDF 111
BLAST of mRNA_H-paniculata_contig4113.10596.1 vs. uniprot
Match: A0A6G0XIC8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XIC8_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 3.700e-8 Identity = 30/57 (52.63%), Postives = 42/57 (73.68%), Query Frame = 3
Query: 141 AEKPKINPDALKLTAEYLRRFVIEAYQRAQLEAQLENDDVLEPEHIERIMVGMMLDF 311
+E KI PDAL +TAE++R FV+EA +RAQ EA +E +EP HIE+I+ ++LDF
Sbjct: 52 SEITKIQPDALNMTAEFMRLFVLEALRRAQDEAMIEESTQVEPRHIEQILAVLLLDF 108
BLAST of mRNA_H-paniculata_contig4113.10596.1 vs. uniprot
Match: A0A0W8D2Z1_PHYNI (Uncharacterized protein n=7 Tax=Phytophthora TaxID=4783 RepID=A0A0W8D2Z1_PHYNI) HSP 1 Score: 59.3 bits (142), Expect = 1.660e-7 Identity = 27/53 (50.94%), Postives = 44/53 (83.02%), Query Frame = 3
Query: 153 KINPDALKLTAEYLRRFVIEAYQRAQLEAQLENDDVLEPEHIERIMVGMMLDF 311
KI+ DA+KL+AE LR FV+EA +RAQ+EA +++ + +EP+H+E+I+ ++LDF
Sbjct: 113 KIHTDAVKLSAEMLRLFVVEALRRAQMEAMVDDSEQVEPQHVEQILAQLLLDF 165
BLAST of mRNA_H-paniculata_contig4113.10596.1 vs. uniprot
Match: A0A024G5M3_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G5M3_9STRA) HSP 1 Score: 57.0 bits (136), Expect = 2.250e-7 Identity = 31/86 (36.05%), Postives = 52/86 (60.47%), Query Frame = 3
Query: 84 ISASVVKKLLQVHWD----------KDKGAEKPKINPDALKLTAEYLRRFVIEAYQRAQLEAQLENDDVLEPEHIERIMVGMMLDF 311
I +S+V++L + W D + KI D L+++AE+L+ F+IEA RAQ+EA +++ +EP HIE+I+ ++LDF
Sbjct: 2 IPSSLVEQLFRREWQAQDMTRDGRTSDHSLQISKIQQDTLRMSAEFLKLFLIEALHRAQMEAMMDDAATVEPHHIEQILAQLLLDF 87 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4113.10596.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4113.10596.1 >prot_H-paniculata_contig4113.10596.1 ID=prot_H-paniculata_contig4113.10596.1|Name=mRNA_H-paniculata_contig4113.10596.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=98bp MIGGDQVPERAPPPRQQQQPTISASVVKKLLQVHWDKDKGAEKPKINPDAback to top mRNA from alignment at H-paniculata_contig4113:599..7835- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4113.10596.1 ID=mRNA_H-paniculata_contig4113.10596.1|Name=mRNA_H-paniculata_contig4113.10596.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7237bp|location=Sequence derived from alignment at H-paniculata_contig4113:599..7835- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4113:599..7835- >mRNA_H-paniculata_contig4113.10596.1 ID=mRNA_H-paniculata_contig4113.10596.1|Name=mRNA_H-paniculata_contig4113.10596.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=588bp|location=Sequence derived from alignment at H-paniculata_contig4113:599..7835- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |