mRNA_H-paniculata_contig41101.10588.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig41101.10588.1 vs. uniprot
Match: D8LDF4_ECTSI (5'-nucleotidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDF4_ECTSI) HSP 1 Score: 80.9 bits (198), Expect = 7.220e-17 Identity = 34/55 (61.82%), Postives = 45/55 (81.82%), Query Frame = 1
Query: 10 VDFDFTMTKFWVNGRRGSSCHMVVTESGLFSQEYHEVTTKLREHYYPME-ASDVS 171
DFDFT+TKFWVNG+RG SCH V+ ESGL + +H+ T++LR+HYYP+E A D+S
Sbjct: 12 TDFDFTLTKFWVNGKRGDSCHAVIDESGLLGEGFHKRTSELRDHYYPLEVAPDLS 66
BLAST of mRNA_H-paniculata_contig41101.10588.1 vs. uniprot
Match: A0A6H5JI70_9PHAE (5'-nucleotidase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI70_9PHAE) HSP 1 Score: 75.9 bits (185), Expect = 8.140e-15 Identity = 33/54 (61.11%), Postives = 42/54 (77.78%), Query Frame = 1
Query: 13 DFDFTMTKFWVNGRRGSSCHMVVTESGLFSQEYHEVTTKLREHYYPME-ASDVS 171
DFDFT+TKFWVNG+RG SCH V+ SGL + +H+ T +LR HYYP+E A D+S
Sbjct: 47 DFDFTLTKFWVNGKRGDSCHAVIDGSGLLGEGFHKRTWELRNHYYPLEVAPDLS 100
BLAST of mRNA_H-paniculata_contig41101.10588.1 vs. uniprot
Match: A0A7S3LZW9_9STRA (5'-nucleotidase n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3LZW9_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 2.360e-10 Identity = 25/48 (52.08%), Postives = 36/48 (75.00%), Query Frame = 1
Query: 13 DFDFTMTKFWVNGRRGSSCHMVVTESGLFSQEYHEVTTKLREHYYPME 156
DFDFT+TKF++NG RG+SCH ++ + GL + EYH+ L+ YYP+E
Sbjct: 79 DFDFTITKFYMNGVRGASCHKIIEDCGLMAAEYHDEAQGLQAKYYPLE 126
BLAST of mRNA_H-paniculata_contig41101.10588.1 vs. uniprot
Match: A0A2R5G5J1_9STRA (5'-nucleotidase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G5J1_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 2.740e-10 Identity = 26/51 (50.98%), Postives = 32/51 (62.75%), Query Frame = 1
Query: 10 VDFDFTMTKFWVNGRRGSSCHMVVTESGLFSQEYHEVTTKLREHYYPMEAS 162
+DFD+TMT FWV RG SCH + E GL YH V L+E Y+P+E S
Sbjct: 914 IDFDYTMTTFWVGEERGYSCHRTIEECGLLPDSYHRVARGLQEKYFPLEIS 964
BLAST of mRNA_H-paniculata_contig41101.10588.1 vs. uniprot
Match: W7TPE8_9STRA (5'-nucleotidase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TPE8_9STRA) HSP 1 Score: 58.2 bits (139), Expect = 2.830e-8 Identity = 28/63 (44.44%), Postives = 39/63 (61.90%), Query Frame = 1
Query: 13 DFDFTMTKFWVNGRRGSSCHMVVTESGLFSQEYHEVTTKLREHYYPMEASDVSLSGPGKLGIL 201
D+DFT+T F++NGRR SCH + + L S YHE L+E+YY E D SLS K+ ++
Sbjct: 78 DWDFTLTHFFLNGRRACSCHKAIEDCDLLSAAYHEKAQALQEYYYAKEV-DPSLSVAEKVPLM 139
BLAST of mRNA_H-paniculata_contig41101.10588.1 vs. uniprot
Match: A0A7S3DJJ1_9EUKA (5'-nucleotidase n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3DJJ1_9EUKA) HSP 1 Score: 55.1 bits (131), Expect = 3.390e-7 Identity = 21/51 (41.18%), Postives = 33/51 (64.71%), Query Frame = 1
Query: 10 VDFDFTMTKFWVNGRRGSSCHMVVTESGLFSQEYHEVTTKLREHYYPMEAS 162
DFD+TM+KF+ G++GSS H + L EYH+ ++++ YYP+E S
Sbjct: 75 TDFDYTMSKFFFEGKKGSSSHGAIEACNLLGDEYHQKVIEVKDKYYPLEIS 125
BLAST of mRNA_H-paniculata_contig41101.10588.1 vs. uniprot
Match: A0A388LLW2_CHABU (5'-nucleotidase n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LLW2_CHABU) HSP 1 Score: 53.1 bits (126), Expect = 1.750e-6 Identity = 23/49 (46.94%), Postives = 33/49 (67.35%), Query Frame = 1
Query: 10 VDFDFTMTKFWVNGRRGSSCHMVVTESGLFSQEYHEVTTKLREHYYPME 156
DFD T+TKF VNGR+G +CH ++++ + EY +L EHYYP+E
Sbjct: 1370 ADFDMTLTKFRVNGRKGQTCHALLSQE---NPEYDRKRQQLYEHYYPLE 1415
BLAST of mRNA_H-paniculata_contig41101.10588.1 vs. uniprot
Match: D8M5R1_BLAHO (5'-nucleotidase n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8M5R1_BLAHO) HSP 1 Score: 52.4 bits (124), Expect = 3.020e-6 Identity = 21/49 (42.86%), Postives = 35/49 (71.43%), Query Frame = 1
Query: 13 DFDFTMTKFWVNG-RRGSSCHMVVTESGLFSQEYHEVTTKLREHYYPME 156
DFD+T++ F+ G +R SCH ++ + LFS++YH+ T L++ YYP+E
Sbjct: 40 DFDYTLSTFYKEGTQRNPSCHGILEQCQLFSEDYHKATRALQQEYYPIE 88
BLAST of mRNA_H-paniculata_contig41101.10588.1 vs. uniprot
Match: A0A068TX58_COFCA (5'-nucleotidase n=1 Tax=Coffea canephora TaxID=49390 RepID=A0A068TX58_COFCA) HSP 1 Score: 51.6 bits (122), Expect = 5.560e-6 Identity = 23/49 (46.94%), Postives = 33/49 (67.35%), Query Frame = 1
Query: 10 VDFDFTMTKFWVNGRRGSSCHMVVTESGLFSQEYHEVTTKLREHYYPME 156
DFD T+TK+W++GRRG S H ++ + S EY E KL E+Y+P+E
Sbjct: 38 ADFDATLTKYWIDGRRGQSSHGLLRQG---SPEYDEKRQKLYEYYHPLE 83
BLAST of mRNA_H-paniculata_contig41101.10588.1 vs. uniprot
Match: UPI001CC52C9F (cytosolic 5'-nucleotidase 3-like isoform X1 n=4 Tax=Proteaceae TaxID=4328 RepID=UPI001CC52C9F) HSP 1 Score: 51.6 bits (122), Expect = 5.820e-6 Identity = 24/51 (47.06%), Postives = 34/51 (66.67%), Query Frame = 1
Query: 10 VDFDFTMTKFWVNGRRGSSCHMVVTESGLFSQEYHEVTTKLREHYYPMEAS 162
VDFD T+TK+WVNGRRG S H ++ + + EY +L E+Y+P+E S
Sbjct: 85 VDFDATLTKYWVNGRRGQSSHNLLQQK---NPEYDSKRQQLFEYYHPLEFS 132 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig41101.10588.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig41101.10588.1 >prot_H-paniculata_contig41101.10588.1 ID=prot_H-paniculata_contig41101.10588.1|Name=mRNA_H-paniculata_contig41101.10588.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=58bp MTKFWVNGRRGSSCHMVVTESGLFSQEYHEVTTKLREHYYPMEASDVSLSback to top mRNA from alignment at H-paniculata_contig41101:1333..1533- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig41101.10588.1 ID=mRNA_H-paniculata_contig41101.10588.1|Name=mRNA_H-paniculata_contig41101.10588.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=201bp|location=Sequence derived from alignment at H-paniculata_contig41101:1333..1533- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig41101:1333..1533- >mRNA_H-paniculata_contig41101.10588.1 ID=mRNA_H-paniculata_contig41101.10588.1|Name=mRNA_H-paniculata_contig41101.10588.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=348bp|location=Sequence derived from alignment at H-paniculata_contig41101:1333..1533- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |