mRNA_H-paniculata_contig4110.10587.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4110.10587.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE) HSP 1 Score: 177 bits (450), Expect = 1.300e-50 Identity = 98/203 (48.28%), Postives = 119/203 (58.62%), Query Frame = 1
Query: 1 FYLIRDRDR-------------EVQHKSHIPEVMFICAVSHPDPSRDFDGEIGI*RVCVIKQAQRSSA-------------------GRERG----QQYEFDVTIDAEWYQEWYKHSFLPALKEKMLWLEGEEVVAQQDGAILHTGKDTPRKLNELGRDGRWNVNLVAQPAQSPDPNINDLGFFASLKSRDWRELYGTTDGLV 501
FYL+R++++ V H+SH+P++M I A + PDP+ DFDG+IGI R+CVI+ AQRSS GR R ++YEFD TIDAEWY++WY LPA+KEKM WL + VV QQDGA HTGK P LN G W V LV QPAQSPD NINDLG FASLK R W + D LV
Sbjct: 162 FYLMREKEKVRVFSGEDVPGPPRVPHESHLPKIMVIVANARPDPAHDFDGKIGIWRICVIETAQRSSKKSTSSTAPSTRSGWREPPHGRNRPAIVQEEYEFDCTIDAEWYKDWYIDVLLPAIKEKMPWLRSKRVVVQQDGASPHTGKGNPEILNSAGIARGWLVELVTQPAQSPDLNINDLGCFASLKPRVWGVNAFSIDELV 364
BLAST of mRNA_H-paniculata_contig4110.10587.1 vs. uniprot
Match: J3S7K7_BETVV (Mariner transposase n=2 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=J3S7K7_BETVV) HSP 1 Score: 119 bits (298), Expect = 1.790e-27 Identity = 83/243 (34.16%), Postives = 128/243 (52.67%), Query Frame = 1
Query: 1 FYLIRDRD---REVQHKSHIPEVMFICAVSHP--DPSRD--FDGEIGI*RVCVIKQAQRSSAGRERGQ-QYEFDVTIDAEWYQEWYKHSFLPALKEKMLWLEG--EEVVAQQDGAILHTGKDTPRKLNELGRDGRWNVNLVAQPAQSPDPNINDLGFFASLKSRDWRELYGTTDGLVEGVKSMHDAYDAAILERVWQSLFKRYNQVLKALRGNDLEIEHTDNKKRQRAGSLPKSVKIDREVFD 699
FYL+ + + R Q K+ I +VMF+ A++ P P+ D +DG+IGI +AQR SA R G + + +I E +E + LPA++ K W E +E+ QQD A H + L E R+G + +N++ QPAQSPD NI DLGFF +++S + T D L++ V+ + Y+ I+ W L ++LK GN+ + H KK R G LP +V+I E+ +
Sbjct: 251 FYLLSEEEDPYRACQSKAFITKVMFLAAIARPWLGPTGDILWDGKIGIFPFIDEVRAQRWSANRPAGTIEKKAKQSITKETIREMIINKLLPAIRAK--WPENGCKEIWIQQDNARPHIQPNDAEFL-EACREGGFEINIICQPAQSPDLNILDLGFFKAIQSIQHQSFPKTVDELIKSVEDAYTVYEPRIINYTWIHLMYVMVEILKVKGGNNYKNPHNSKKKMDRLGLLPTTVEISEELVN 490
BLAST of mRNA_H-paniculata_contig4110.10587.1 vs. uniprot
Match: A0A484KKG0_9ASTE (Uncharacterized protein n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484KKG0_9ASTE) HSP 1 Score: 112 bits (281), Expect = 1.550e-26 Identity = 72/233 (30.90%), Postives = 117/233 (50.21%), Query Frame = 1
Query: 13 RDRDREVQHKSHIPEVMFICAVSHP--DPSRD--FDGEIGI*RVCVIKQAQRSSAGRERGQQYEFDVT-IDAEWYQEWYKHSFLPALKEKMLWLEGEEVVAQQDGAILHTGKDTPRKLNELGRDGRWNVNLVAQPAQSPDPNINDLGFFASLKSRDWRELYGTTDGLVEGVKSMHDAYDAAILERVWQSLFKRYNQVLKALRGNDLEIEHTDNKKRQRAGSLPKSVKIDREVF 696
R+ R + K+HIP++M +CAV P P + +DG++GI + + AQR S R G + I E Y+ LPA+KEK+ + ++ QQD A H + P + DG +++ L QP SPD NI DLGFFAS++S + D LV+ V + +A L VW S +++K GN+ ++ H + +R G+LP +++ +++
Sbjct: 15 REPHRTAKSKAHIPKLMHLCAVGRPIFGPEGEVIWDGKVGIWPLTIQVPAQRRSKNRAAGTLETKPIPRITKEVYRTLMIQQVLPAIKEKVPEAITKHIIIQQDNAKPHIDVNDPEFVQVANADG-YSIELTCQPPNSPDLNILDLGFFASIQSLQHQTSTRNVDELVQHVAQAYANLEAKKLNYVWISYQLAMTEIMKVQGGNNYKLAHIGKARLEREGALPNQLQVSTKLY 246
BLAST of mRNA_H-paniculata_contig4110.10587.1 vs. uniprot
Match: A0A485KDC6_9STRA (Aste57867_3131 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KDC6_9STRA) HSP 1 Score: 115 bits (289), Expect = 1.800e-26 Identity = 75/232 (32.33%), Postives = 113/232 (48.71%), Query Frame = 1
Query: 1 FYLIRDRD---REVQHKSHIPEVMFICAVSHP----DPSRDFDGEIGI*RVCVIKQAQRSSAGRERGQQYEFDVTIDAEWYQEWYKHSFLPALKEKMLWLEGEEVVAQQDGAILHTGKDTPRKLNELGRDGRWNVNLVAQPAQSPDPNINDLGFFASLKSRDWRELYGTTDGLVEGVKSMHDAYDAAILERVWQSLFKRYNQVLKALRGNDLEIEHTDNKKRQRAGSLPKSV 675
+YL D D R+ K HI +VMF+ AV+ P R +DG+IG+ + AQR S RERG VT+ + Y+E+ +P +K+ + QQD A H D + G W++ LVAQPA SPD N+ DLGFF S+++ RE+ D LV V D D ++L++ + +L + + LK N ++ H+ K R G + + V
Sbjct: 186 YYLWHDEDVPVRKCSSKRHIIKVMFLTAVARPRYDYTQRRMWDGKIGMWPFVSVVPAQRKSKNRERGTPVTTPVTVTKKVYREYLLEHVIPTIKKVWPGRRSHPIYIQQDNARPHVEVDDAA-VTLAGHSDGWSIQLVAQPAMSPDFNVLDLGFFNSIQALQHREVVTGIDDLVAAVHRAFDDLDWSVLDKTFMTLQRVMGEALKMGGDNAFKLPHSKKDKTARLGPVARVV 416
BLAST of mRNA_H-paniculata_contig4110.10587.1 vs. uniprot
Match: A0A6G0X8U9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X8U9_9STRA) HSP 1 Score: 116 bits (290), Expect = 2.010e-26 Identity = 77/241 (31.95%), Postives = 120/241 (49.79%), Query Frame = 1
Query: 1 FYLIRDRD---REVQHKSHIPEVMFICAVSHPD----PSRDFDGEIGI*RVCVIKQAQRSSAGRERGQQYEFDVTIDAEWYQEWYKHSFLPALKEKM--LWLEGEEVVAQQDGAILHTGKDTPRKLNELGRDGRWNVNLVAQPAQSPDPNINDLGFFASLKSRDWRELYGTTDGLVEGVKSMHDAYDAAILERVWQSLFKRYNQVLKALRGNDLEIEHTDNKKRQRAGSLPKSVKIDREVF 696
FYL++ + R +HKSHIP++MF+ AV P S+ FDG++GI + A+RSS + +G T+ + Y + + LPA+ K W + + QQDGA H P + G N+ LV QPA SPD NI DLGFFA++++ +R+ T D ++ V + L+ VW SL +R ++ N +++EH + ++ G LP S + VF
Sbjct: 169 FYLVKGEELPSRTARHKSHIPKLMFLTAVGRPQYDHGTSQYFDGKLGIFPFVIHGTAKRSSRHQAKGAPVLIPQTVTRDIYVDALVNHVLPAILTKFPSRW---KTLYIQQDGARPHCTDGCPELVASAASFG-LNIKLVTQPANSPDLNILDLGFFAAIQTLQYRKCPKTIDEFLDAVHESFHELKSDCLDSVWLSLHRRMATIIDHYGDNTMKLEHMRKEALRKQGKLPLSSTLASNVF 405
BLAST of mRNA_H-paniculata_contig4110.10587.1 vs. uniprot
Match: A0A453NE83_AEGTS (Uncharacterized protein n=2 Tax=Triticeae TaxID=147389 RepID=A0A453NE83_AEGTS) HSP 1 Score: 111 bits (278), Expect = 2.900e-26 Identity = 75/222 (33.78%), Postives = 112/222 (50.45%), Query Frame = 1
Query: 25 REVQHKSHIPEVMFICAVSHPDPSRD----FDGEIGI*RVCVIKQAQRSSAGRERGQQYEFDV--TIDAEWYQEWYKHSFLPALKEKMLWLEGEE---VVAQQDGAILHTGKDTPRKLNELGRDGRWNVNLVAQPAQSPDPNINDLGFFASLKSRDWRELYGTTDGLVEGVKSMHDAYDAAILERVWQSLFKRYNQVLKALRGNDLEIEHTDNKKRQRAGSL 663
RE +HK+HI ++MF+ A++ P + FDG+IG+ + QAQ+ S R RG +E T+D E +E+ LPA+KEK W E + + QQD A H D P L E R G W++ ++ QP SPD NI DLG+FAS+++ R++ T +V+ V Y L R+W S +++K + H K +R G L
Sbjct: 31 RECKHKNHIQKIMFLSAMARPRYAAQGNCVFDGKIGVWAYTEMVQAQKKSQNRLRGT-WELKPCHTVDREKSREYLVKYVLPAIKEK--WPESDRWNTIYVQQDNARTHIKPDDPLFLQEAARGG-WDIRMIYQPPNSPDTNILDLGWFASIQAMFHRKMPKTLAEIVQKVNQSLAEYPHQKLNRIWLSHQACMREIIKHKGSIHYAVPHLKKKALERQGLL 248
BLAST of mRNA_H-paniculata_contig4110.10587.1 vs. uniprot
Match: A0A8I6XRQ9_HORVV (HTH_Tnp_Tc3_2 domain-containing protein n=1 Tax=Hordeum vulgare subsp. vulgare TaxID=112509 RepID=A0A8I6XRQ9_HORVV) HSP 1 Score: 114 bits (285), Expect = 1.930e-25 Identity = 77/234 (32.91%), Postives = 115/234 (49.15%), Query Frame = 1
Query: 25 REVQHKSHIPEVMFICAVSHPDPSRD----FDGEIGI*RVCVIKQAQRSSAGRERGQQYEFDVT--IDAEWYQEWYKHSFLPALKEKMLWLEGEE---VVAQQDGAILHTGKDTPRKLNELGRDGRWNVNLVAQPAQSPDPNINDLGFFASLKSRDWRELYGTTDGLVEGVKSMHDAYDAAILERVWQSLFKRYNQVLKALRGNDLEIEHTDNKKRQRAGSLPKSVKIDREVFD 699
RE +HK+HI ++MF+ A++ P FDG+IG+ QA++ S R RG +E +D E QE+ LPA+KEK W E + + QQD A H D P L E R G W++ ++ QP SPD NI DLG+FAS+++ +++ T +V V Y L R+W S +++K + H K +R G LP + +DRE +
Sbjct: 439 RECKHKNHIQKIMFLSAMARPRYDAQGNCVFDGKIGVWAYTEWVQAKKKSQNRLRGA-WELKPCDKVDREKSQEYLVKYVLPAIKEK--WPESDRWNTIYVQQDNARTHIKPDDPLFLQEAARGG-WDIRMIYQPPNSPDTNILDLGWFASIQAMFHKKMPKTLPEIVAKVNQSLAEYPHQKLNRIWLSHQACMREIIKHKGSMHYAVPHLKKKALERQGCLPVRLTVDREYVE 668
BLAST of mRNA_H-paniculata_contig4110.10587.1 vs. uniprot
Match: A0A6A4Z9D8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z9D8_9STRA) HSP 1 Score: 111 bits (277), Expect = 2.620e-25 Identity = 72/242 (29.75%), Postives = 117/242 (48.35%), Query Frame = 1
Query: 1 FYLIRDR---DREVQHKSHIPEVMFICAVSHPD----PSRDFDGEIGI*RVCVIKQAQRSSAGRERGQQYEFDVTIDAEWYQEWYKHSFLPALKEKMLWLEGEEVVAQQDGAILHTGKDTPRKLNELGRDGRWNVNLVAQPAQSPDPNINDLGFFASLKSRDWRELYGTTDGLVEGVKSMHDAYDAAILERVWQSLFKRYNQVLKALRGNDLEIEHTDNKKRQRAGSLPKSVKIDREVFDVV 705
+YL D R+ + K HI +VMF+ AV+ P R +DG IG+ + A RSS R+RG T+ + Y+ + +PA++ K + ++ QQD A H + P + GR G W ++L +QPAQSPD N+ DLG+F +++S + T D LV V + + +L++ + +L K + K ND ++ H + G LP ++ D +V V
Sbjct: 61 YYLWSDEAVPTRKCRSKKHITKVMFLTAVARPRYDARNKRMWDGRIGMWPFVKTRPALRSSKNRKRGDDVTEPFTVTRDVYRSFLIDKVIPAVRSKWPSSKKNQIWIQQDNAKPHVSVNDPAVV-AAGRQGGWTISLCSQPAQSPDLNVLDLGYFNAIQSLQHQMATYTLDDLVVAVVKSFEELECTVLDKTFMTLQKVMECIFKMGGDNDFKLPHQKKHGLVKEGPLPTRLECDEDVCAAV 301
BLAST of mRNA_H-paniculata_contig4110.10587.1 vs. uniprot
Match: A0A6A5AA16_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AA16_9STRA) HSP 1 Score: 112 bits (280), Expect = 3.690e-25 Identity = 67/216 (31.02%), Postives = 110/216 (50.93%), Query Frame = 1
Query: 1 FYLIRDR---DREVQHKSHIPEVMFICAVSHPDPS----RDFDGEIGI*RVCVIKQAQRSSAGRERGQQYEFDVTIDAEWYQEWYKHSFLPALKEKMLWLEGEEVVAQQDGAILHTGKDTPRKLNELGRDGRWNVNLVAQPAQSPDPNINDLGFFASLKSRDWRELYGTTDGLVEGVKSMHDAYDAAILERVWQSLFKRYNQVLKALRGNDLEIEH 627
FYL D R+ Q K HI +VMF+CAV+ P + +DG++G+ + A+R S R+RG +T+ Y+ + +PA++ + G + QQD A H D P L GR WN+ L+AQPAQSPD N+ DLGFF +++S + T D L++ V+ + +L++ + +L K + +++ N ++ H
Sbjct: 186 FYLWHDEPTPQRKAQSKRHITKVMFLCAVARPRHDSAHRKMWDGKVGLWPFVETQLAKRRSKNRDRGTPVTVPMTVTKPVYRRFLVDKVIPAIQAQWPGRRGATIYVQQDNAKPHVAVDDPEVL-AAGRKEGWNIQLMAQPAQSPDFNVLDLGFFNAIQSLQHQTTARTIDDLIKCVEDAFENLAWRVLDKTFMTLQKVMEEAMRSSGDNVYKLPH 400
BLAST of mRNA_H-paniculata_contig4110.10587.1 vs. uniprot
Match: A0A397C8F5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397C8F5_9STRA) HSP 1 Score: 110 bits (275), Expect = 3.940e-25 Identity = 74/231 (32.03%), Postives = 114/231 (49.35%), Query Frame = 1
Query: 25 REVQHKSHIPEVMFICAVSHP--DPSRD--FDGEIGI*RVCVIKQAQRSSAGRERGQQYEFDVTIDAEWYQEWYKHSFLPALKEKMLWLEGEEVVAQQDGAILHTGKDTPRKLNELGRDGRWNVNLVAQPAQSPDPNINDLGFFASLKSRDWRELYGTTDGLVEGVKSMHDAYDAAILERVWQSLFKRYNQVLKALRGNDLEIEHTDNKKRQRAGSLPKSVKIDREVFDVV 705
R+ K HI +VMF+ AV+ P D R +DG++G+ ++ AQR+S R+RG VT+ + Y+E+ +P +K + + QQD A H D P + GR W + LVAQPA SPD N+ DLGFF S+++ R++ D LV V + D IL++ + +L + + +K N ++ H K R G SV D +V V+
Sbjct: 62 RKCSSKRHIVKVMFLTAVARPRFDYVRKTMWDGKLGMWPFVAVQPAQRTSKNRDRGTLVTTPVTVTKKVYREYLLQHVIPRIKAVWPGHRDQPIYIQQDNARPHVEVDDPAVV-AAGRSDGWAIQLVAQPAMSPDFNVLDLGFFNSIQALQHRQVVTGIDDLVAAVHGAFNELDWRILDKTFVTLVRVMEESMKMGGDNSYKLPHQSKDKMARLGPTAPSV-CDPDVVTVI 290 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4110.10587.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4110.10587.1 >prot_H-paniculata_contig4110.10587.1 ID=prot_H-paniculata_contig4110.10587.1|Name=mRNA_H-paniculata_contig4110.10587.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=147bp MLWLEGEEVVAQQDGAILHTGKDTPRKLNELGRDGRWNVNLVAQPAQSPDback to top mRNA from alignment at H-paniculata_contig4110:3131..3838+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4110.10587.1 ID=mRNA_H-paniculata_contig4110.10587.1|Name=mRNA_H-paniculata_contig4110.10587.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=708bp|location=Sequence derived from alignment at H-paniculata_contig4110:3131..3838+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4110:3131..3838+ >mRNA_H-paniculata_contig4110.10587.1 ID=mRNA_H-paniculata_contig4110.10587.1|Name=mRNA_H-paniculata_contig4110.10587.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=882bp|location=Sequence derived from alignment at H-paniculata_contig4110:3131..3838+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |