mRNA_H-paniculata_contig4104.10577.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4104.10577.1 vs. uniprot
Match: A0A6H5JG59_9PHAE (NADH-cytochrome b5 reductase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG59_9PHAE) HSP 1 Score: 420 bits (1080), Expect = 8.270e-141 Identity = 213/298 (71.48%), Postives = 237/298 (79.53%), Query Frame = 1
Query: 109 RAPVA--AVTALGTAGAAALLQQKQHSFCHHSTGTKMA--ESAGAFSPKEFRQFAIREIEQKTHNVKRFRVALPSADDIMGMHTASCIVIKGTGKDGKVAVRPYTPTTTNDTKGHFDLVIKVYPDGNVSSHMFSLGVGDKIEVKGPFPKFDYQPNVKKEIGMVAGGTGITPMLQVLQEVLFNPEDKTKVTLVFANQTPGDIMLKDEIDKLEAEHDNLTVVYLVDRDPEGKWTGKTGYVNDELVKEYLPKPTTDGVIFVCGPPGMMNAVSGPKNEDKSQGEVGGLLKRLGYTEEMVYKF 990
R PVA A G AGAAAL S + A S AFSPKEFR F +REIE THNV+RFR+ LPS + +MGM TASCIV+KG GKDG VAVRPYTPTTTNDTKGHFDLVIKVYP+GNVSSH+FSL VGD + VKGPFPKFDY PNVKKEIGM+AGGTGITPMLQVLQE+L NPEDKTKVTL+FAN T DIMLK EIDKL AEHDN VVY+VD+ EG WTG TG+VN L++ +LPKP+ D VIFVCGPPGMMNA+SGPKNEDKSQGE+GG+LK LGYT +MVYKF
Sbjct: 15 RGPVANRAAALAGAAGAAALFHNTSTSSFRSTAAMAEATDSSKTAFSPKEFRDFPLREIEDMTHNVRRFRIGLPSEEHVMGMKTASCIVVKGKGKDGSVAVRPYTPTTTNDTKGHFDLVIKVYPEGNVSSHLFSLKVGDTVAVKGPFPKFDYSPNVKKEIGMIAGGTGITPMLQVLQELLLNPEDKTKVTLLFANVTAADIMLKAEIDKLAAEHDNFDVVYVVDKAEEG-WTGATGHVNASLIETHLPKPSGDSVIFVCGPPGMMNAISGPKNEDKSQGEIGGVLKALGYTSDMVYKF 311
BLAST of mRNA_H-paniculata_contig4104.10577.1 vs. uniprot
Match: A0A835ZLM4_9STRA (NADH-cytochrome b5 reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLM4_9STRA) HSP 1 Score: 296 bits (757), Expect = 1.510e-92 Identity = 137/254 (53.94%), Postives = 184/254 (72.44%), Query Frame = 1
Query: 229 AFSPKEFRQFAIREIEQKTHNVKRFRVALPSADDIMGMHTASCIVIKGTGKDGKVAVRPYTPTTTNDTKGHFDLVIKVYPDGNVSSHMFSLGVGDKIEVKGPFPKFDYQPNVKKEIGMVAGGTGITPMLQVLQEVLFNPEDKTKVTLVFANQTPGDIMLKDEIDKLEAEHDNLTVVYLVDRDPEGKWTGKTGYVNDELVKEYLPKPTTDGVIFVCGPPGMMNAVSGPKNEDKSQGEVGGLLKRLGYTEEMVYKF 990
A SPKE+R+F + E+ +H+ K F++ LPS+ G+ TASC++++GTG DGK VRPYTPTT N T GHFDLVIK YP+GNVSS+M L GDK+ VKGPFPK PN+K+ IGM+AGGTGITPM Q + E+L +D T +TL+F N+TP DI+LK E+D L A H +VY+VD+ P+ W G +GY+ +++Y+P P+ D ++FVCGPP +M ++SG K +DKSQG + G LK G+TEEMVYKF
Sbjct: 41 ALSPKEWREFPVSEVHTLSHDTKMFKIQLPSSKHETGLETASCLLVQGTGLDGKPTVRPYTPTTLNKTLGHFDLVIKRYPEGNVSSYMHGLKPGDKLMVKGPFPKLKVTPNMKRNIGMIAGGTGITPMYQCILELLDASDDATNITLLFGNRTPSDILLKAELDALAATHPRFKLVYIVDK-PDSSWKGLSGYITANEIQKYMPPPSADNMVFVCGPPPLMKSISGDKAKDKSQGPLEGALKACGFTEEMVYKF 293
BLAST of mRNA_H-paniculata_contig4104.10577.1 vs. uniprot
Match: A0A836C9R3_9STRA (NADH-cytochrome b5 reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9R3_9STRA) HSP 1 Score: 282 bits (722), Expect = 2.330e-87 Identity = 139/255 (54.51%), Postives = 181/255 (70.98%), Query Frame = 1
Query: 229 AFSPKEFRQFAIREIEQKTHNVKRFRVALPSADDIMGMHTASCIVIKGTGKDGKVAV-RPYTPTTTNDTKGHFDLVIKVYPDGNVSSHMFSLGVGDKIEVKGPFPKFDYQPNVKKEIGMVAGGTGITPMLQVLQEVLFNPEDKTKVTLVFANQTPGDIMLKDEIDKLEAEHDNLTVVYLVDRDPEGKWTGKTGYVNDELVKEYLPKPTTDGVIFVCGPPGMMNAVSGPKNEDKSQGEVGGLLKRLGYTEEMVYKF 990
A P+E+RQF ++EI +H+ K+F VALPS + +GM TASC++++GTG DG V RPYTPT+ N TKGHF+LVIK Y G VSS+M L VGD I+VKGPFPK PN+KK IG++AGGTGITPM Q +QE+L D T++ L++ N+TP DI+LK E+D L ++ +VVY V +G WTG G++ E K+YLP P+ D ++FVCGPP +M A+SG K DKSQG V G+LK LGYTE VYKF
Sbjct: 38 ALDPQEWRQFTVKEITPLSHDTKKFTVALPSEEHELGMVTASCLMVEGTGLDGTSQVARPYTPTSLNGTKGHFELVIKKYDKGQVSSYMHGLSVGDAIKVKGPFPKIKLDPNMKKRIGLIAGGTGITPMYQCIQELLEADGDATEMVLLYGNKTPKDILLKSELDALATKYPRFSVVYKVGEATDG-WTGPVGHIGLEDCKQYLPPPSDDHMVFVCGPPPLMKAISGDKGPDKSQGAVDGVLKELGYTETQVYKF 291
BLAST of mRNA_H-paniculata_contig4104.10577.1 vs. uniprot
Match: A9RJM3_PHYPA (NADH-cytochrome b5 reductase n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9RJM3_PHYPA) HSP 1 Score: 276 bits (705), Expect = 3.140e-85 Identity = 132/259 (50.97%), Postives = 178/259 (68.73%), Query Frame = 1
Query: 229 AFSPKEFRQFAIREIEQKTHNVKRFRVALPSADDIMGMHTASCIVIK---GTGKDGK--VAVRPYTPTTTNDTKGHFDLVIKVYPDGNVSSHMFSLGVGDKIEVKGPFPKFDYQPNVKKEIGMVAGGTGITPMLQVLQEVLFNPEDKTKVTLVFANQTPGDIMLKDEIDKLEAEHDNLTVVYLVDRDPEGKWTGKTGYVNDELVKEYLPKPTTDGVIFVCGPPGMMNAVSGPKNEDKSQGEVGGLLKRLGYTEEMVYKF 990
A +PKEF +F + E+ HN K +R S + +G+H ASC++ K G KDG +RPYTP + D+KG+FDL++K+YP+G ++ H+ L GD ++VKGP PK Y PN+KK+IGM+AGGTGITPMLQV+ ++ NPED T+V+LVFAN TP DI+LK ++D L H N V Y+VD P W G GY+N +++ + LP P+ D +I VCGPPG+MN +SG K D+SQGE+ GLLK LGYT E VYKF
Sbjct: 7 ALNPKEFVKFKVSEVRDVNHNTKLYRFTFDS-QEALGLHVASCLITKAEIGKKKDGSPNYVIRPYTPISPPDSKGYFDLLVKIYPNGKMTQHLAQLKPGDTLDVKGPIPKLPYAPNMKKQIGMIAGGTGITPMLQVIDAIVSNPEDNTQVSLVFANTTPADILLKSKLDALSFAHPNFKVYYVVDS-PTNDWKGGKGYINKDVLLKGLPSPSDDTLILVCGPPGLMNLISGDKAPDRSQGELVGLLKELGYTSEQVYKF 263
BLAST of mRNA_H-paniculata_contig4104.10577.1 vs. uniprot
Match: A0A1Y1Y340_9FUNG (NADH-cytochrome b5 reductase n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Y340_9FUNG) HSP 1 Score: 278 bits (710), Expect = 5.000e-85 Identity = 136/256 (53.12%), Postives = 180/256 (70.31%), Query Frame = 1
Query: 229 AFSPKEFRQFAIREIEQKTHNVKRFRVALPSADDIMGMHTASCIVIKGTGKDGK-VAVRPYTPTTTNDTKGHFDLVIKVYPDGNVSSHMFSLGVGDKIEVKGPFPKFDYQPNVKKEIGMVAGGTGITPMLQVLQEVLFNPEDKTKVTLVFANQTPGDIMLKDEIDKLEAEH-DNLTVVYLVDRDPEGKWTGKTGYVNDELVKEYLPKPTTDGVIFVCGPPGMMNAVSGPKNEDKSQGEVGGLLKRLGYTEEMVYKF 990
A P +F F + E+E+ HN K FR LP + + GM ASC++ K GK V +RPYTPT+ +DT GHFD++IK YP+G +S H+ ++ GD + VKGPFPK+ Y+PN IGM+AGGTGITPMLQV+++V NPEDKTK+TLVFAN DI+L+DE+DKL EH + + Y +D P+G WT G VN E+VK+++PKP D ++FVCGP M+ ++SG KN DKSQG +GG+LK LGYTE VYKF
Sbjct: 77 ALDPSQFIDFKLLEVEEINHNTKLFRFELPEGETL-GMSVASCVITKVPKAGGKGVIIRPYTPTSDDDTVGHFDMIIKKYPNGPMSEHIHNMKPGDTLAVKGPFPKYTYKPNTLSHIGMIAGGTGITPMLQVIRKVFKNPEDKTKITLVFANVNEDDILLRDELDKLAMEHPEQFKLYYTLDNAPKG-WTQGQGRVNAEVVKDFMPKPAEDTMVFVCGPDPMVASLSGAKNPDKSQGALGGILKELGYTESNVYKF 330
BLAST of mRNA_H-paniculata_contig4104.10577.1 vs. uniprot
Match: A0A7S4CVQ4_9EUGL (NADH-cytochrome b5 reductase n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CVQ4_9EUGL) HSP 1 Score: 276 bits (707), Expect = 5.510e-85 Identity = 137/256 (53.52%), Postives = 179/256 (69.92%), Query Frame = 1
Query: 226 GAFSPKEFRQFAIREIEQKTHNVKRFRVALPSADDIMGMHTASCIVIK-GTGKDGKVAVRPYTPTTTNDTKGHFDLVIKVYPDGNVSSHMFSLGVGDKIEVKGPFPKFDYQPNVKKEIGMVAGGTGITPMLQVLQEVLFNPEDKTKVTLVFANQTPGDIMLKDEIDKLEAEHDNLTVVYLVDRDPEGKWTGKTGYVNDELVKEYLPKPTTDGVIFVCGPPGMMNAVSGPKNEDKSQGEVGGLLKRLGYTEEMVYKF 990
GAF+PKEFR+F + E + +H+ + FR ALP+ MG+ TASCIV + TG +G+ +RPYTPTT NDTKGHFDLVIK YPD ++ H+FSL GD++EVKGP K Y PN K IGM+AGGTGITPM QV QEVL NP+DKT++ L++ N+T DI+L+ E+D L +H N V Y +D P W G G+V +V + P ++ ++VCGP MM AVSG K +D SQGEV G+LK LGYT++MV+KF
Sbjct: 47 GAFNPKEFRKFKLLESQTISHDTRLFRFALPADTPEMGLPTASCIVTRYATGNEGEYVIRPYTPTTLNDTKGHFDLVIKKYPDAKMAGHIFSLKPGDELEVKGPIIKQRYVPNKYKHIGMIAGGTGITPMYQVAQEVLKNPDDKTEIDLIYGNKTEDDILLRKELDALAKKHPNFRVHYTLDS-PGWMWRGDKGFVTPAMVSSHFPGAKSNSYVYVCGPMPMMKAVSGGKAKDYSQGEVDGVLKELGYTKDMVFKF 301
BLAST of mRNA_H-paniculata_contig4104.10577.1 vs. uniprot
Match: A0A2K1KNZ2_PHYPA (FAD-binding FR-type domain-containing protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1KNZ2_PHYPA) HSP 1 Score: 276 bits (707), Expect = 2.170e-84 Identity = 133/264 (50.38%), Postives = 180/264 (68.18%), Query Frame = 1
Query: 214 AESAGAFSPKEFRQFAIREIEQKTHNVKRFRVALPSADDIMGMHTASCIVIK---GTGKDGK--VAVRPYTPTTTNDTKGHFDLVIKVYPDGNVSSHMFSLGVGDKIEVKGPFPKFDYQPNVKKEIGMVAGGTGITPMLQVLQEVLFNPEDKTKVTLVFANQTPGDIMLKDEIDKLEAEHDNLTVVYLVDRDPEGKWTGKTGYVNDELVKEYLPKPTTDGVIFVCGPPGMMNAVSGPKNEDKSQGEVGGLLKRLGYTEEMVYKF 990
+E A +PKEF +F + E+ HN K +R S + +G+H ASC++ K G KDG +RPYTP + D+KG+FDL++K+YP+G ++ H+ L GD ++VKGP PK Y PN+KK+IGM+AGGTGITPMLQV+ ++ NPED T+V+LVFAN TP DI+LK ++D L H N V Y+VD P W G GY+N +++ + LP P+ D +I VCGPPG+MN +SG K D+SQGE+ GLLK LGYT E VYKF
Sbjct: 83 SEPKTALNPKEFVKFKVSEVRDVNHNTKLYRFTFDS-QEALGLHVASCLITKAEIGKKKDGSPNYVIRPYTPISPPDSKGYFDLLVKIYPNGKMTQHLAQLKPGDTLDVKGPIPKLPYAPNMKKQIGMIAGGTGITPMLQVIDAIVSNPEDNTQVSLVFANTTPADILLKSKLDALSFAHPNFKVYYVVDS-PTNDWKGGKGYINKDVLLKGLPSPSDDTLILVCGPPGLMNLISGDKAPDRSQGELVGLLKELGYTSEQVYKF 344
BLAST of mRNA_H-paniculata_contig4104.10577.1 vs. uniprot
Match: A0A7S2V2T1_9STRA (NADH-cytochrome b5 reductase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2T1_9STRA) HSP 1 Score: 275 bits (702), Expect = 2.510e-84 Identity = 137/261 (52.49%), Postives = 181/261 (69.35%), Query Frame = 1
Query: 211 MAESAGAFSPKEFRQFAIREIEQKTHNVKRFRVALPSADDIMGMHTASCIVIKGTGKDG-KVAVRPYTPTTTNDTKGHFDLVIKVYPDGNVSSHMFSLGVGDKIEVKGPFPKFDYQPNVKKEIGMVAGGTGITPMLQVLQEVLFNPEDKTKVTLVFANQTPGDIMLKDEIDKLEAEHDNLTVVYLVDRDPEGKWTGKTGYVNDELVKEYLPKPTTDGVIFVCGPPGMMNAVSGPKNEDKSQGEVGGLLKRLGYTEEMVYKF 990
++E AFS KE+R F + +I + T N FR LPS + MG+ ASCI +K K+G K +RPYTPTT ND KG+FDL++K YP+G VSS+ +L +GD I VKGP+ K Y+PN+ K IGM+AGGTGITPMLQ+L+ +L NP+DKT+V LVFAN T DIM K+ +D++ E+ N V Y+V + P W G G+V+ + V+ +P P ++FVCGPPGMM ++SG K EDKSQGEV G+LK GYT MVYKF
Sbjct: 36 LSEGKVAFSAKEWRSFPLVQIRELTPNTSLFRFNLPSQEHEMGLSVASCIEVKAPPKEGGKPMIRPYTPTTNNDVKGYFDLIVKDYPNGKVSSYFHNLKIGDSILVKGPYDKLQYKPNMFKRIGMIAGGTGITPMLQMLKVILSNPKDKTEVHLVFANNTEDDIMQKNVLDQMAVEYHNFHVHYVVAK-PRPSWKGGVGFVDLDTVERKIPAPEEGTMVFVCGPPGMMESISGDKAEDKSQGEVSGVLKERGYTSGMVYKF 295
BLAST of mRNA_H-paniculata_contig4104.10577.1 vs. uniprot
Match: I0YS43_COCSC (NADH-cytochrome b5 reductase n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YS43_COCSC) HSP 1 Score: 275 bits (703), Expect = 2.630e-84 Identity = 135/267 (50.56%), Postives = 178/267 (66.67%), Query Frame = 1
Query: 208 KMAESAGAFSPKEFRQFAIREIEQKTHNVKRFRVALPSADDIMGMHTASCIV----IKGTGKDG--KVAVRPYTPTTTNDTKGHFDLVIKVYPDGNVSSHMFSLGVGDKIEVKGPFPKFDYQPNVKKEIGMVAGGTGITPMLQVLQEVLFNPEDKTKVTLVFANQTPGDIMLKDEIDKLEAEHDNLTVVYLVDRDPEGKWTGKTGYVNDELVKEYLPKPTTDGVIFVCGPPGMMNAVSGPKNEDKSQGEVGGLLKRLGYTEEMVYKF 990
+ A AGA P E+R F + + THN R R A P + G+ ASC++ I +DG K +RPYTPT+ D KGHFDLV+K YPDG +S H+ +L VGD +E KGP K Y+PN+KK+IGM+AGGTGITPMLQV EVL NP+DKT+V+LVF N + DI+L+ EID++ +H N V Y+VD+ W G GY+ ++ VK++LP P+ +I VCGPP +M A+SG K EDKSQGE+ G LK +GYT + VYKF
Sbjct: 41 EQAPPAGALDPNEWRSFKVVSKDVITHNTSRLRFATPDPNQTSGLFVASCLLTRAPIGAKKEDGNQKFVIRPYTPTSAPDQKGHFDLVVKGYPDGKMSKHIVNLNVGDSLECKGPISKLRYKPNMKKKIGMIAGGTGITPMLQVASEVLRNPDDKTEVSLVFGNVSEDDILLRKEIDEMAKKHSNFKVYYVVDKPTSFFWRGGKGYITEDTVKKHLPPPSDVSLILVCGPPPLMKAISGDKAEDKSQGELTGTLKSIGYTSDQVYKF 307
BLAST of mRNA_H-paniculata_contig4104.10577.1 vs. uniprot
Match: A0A7S4HPM5_9EUKA (NADH-cytochrome b5 reductase n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4HPM5_9EUKA) HSP 1 Score: 272 bits (696), Expect = 2.700e-83 Identity = 131/259 (50.58%), Postives = 177/259 (68.34%), Query Frame = 1
Query: 214 AESAGAFSPKEFRQFAIREIEQKTHNVKRFRVALPSADDIMGMHTASCIVIKGTGKDGKVAVRPYTPTTTNDTKGHFDLVIKVYPDGNVSSHMFSLGVGDKIEVKGPFPKFDYQPNVKKEIGMVAGGTGITPMLQVLQEVLFNPEDKTKVTLVFANQTPGDIMLKDEIDKLEAEHDNLTVVYLVDRDPEGKWTGKTGYVNDELVKEYLPKPTTDGVIFVCGPPGMMNAVSGPKNEDKSQGEVGGLLKRLGYTEEMVYKF 990
A+ A SP EF++F ++ I HN K FRV PSAD G+ TAS ++IKG KDGK A RPYTP +T DT GH DL+IK YP+GNVS ++ +L VG+ +EVKGPF K +Y+PN+KKEIGM+AGGTG+TPM+QVL+ + N +D T+V+L+ AN T DI+ K+ D LE + Y P W+ G+V+ ++V+ LP P+ D +I CGPP M+ AV+G K ++ +QGEVGG+LK LGYT +MVYKF
Sbjct: 47 ADEKIALSPDEFKEFRLQSITYYNHNTKMFRVQFPSADQSSGLTTASFVLIKGVDKDGKTAARPYTPISTVDTTGHMDLLIKEYPEGNVSKYVHNLKVGESVEVKGPFKKLEYKPNMKKEIGMIAGGTGVTPMVQVLETIFRNSDDNTRVSLITANLTEEDILCKELFDSLEEQFPGRFKAYYTLDKPPADWSMGKGFVSADMVRANLPAPSEDSLILFCGPPPMLKAVAGEKGKNYTQGEVGGVLKDLGYTSDMVYKF 305 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4104.10577.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4104.10577.1 >prot_H-paniculata_contig4104.10577.1 ID=prot_H-paniculata_contig4104.10577.1|Name=mRNA_H-paniculata_contig4104.10577.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=312bp MFSSRASRTAAAVFTRSRAPVAAVTALGTAGAAALLQQKQHSFCHHSTGTback to top mRNA from alignment at H-paniculata_contig4104:1086..10627- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4104.10577.1 ID=mRNA_H-paniculata_contig4104.10577.1|Name=mRNA_H-paniculata_contig4104.10577.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9542bp|location=Sequence derived from alignment at H-paniculata_contig4104:1086..10627- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4104:1086..10627- >mRNA_H-paniculata_contig4104.10577.1 ID=mRNA_H-paniculata_contig4104.10577.1|Name=mRNA_H-paniculata_contig4104.10577.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1872bp|location=Sequence derived from alignment at H-paniculata_contig4104:1086..10627- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |