mRNA_H-paniculata_contig40958.10553.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig40958.10553.1 vs. uniprot
Match: D8LN19_ECTSI (Na+/H+ antiporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN19_ECTSI) HSP 1 Score: 190 bits (482), Expect = 2.420e-58 Identity = 101/133 (75.94%), Postives = 109/133 (81.95%), Query Frame = 1
Query: 1 MPSSYVPQGYALKKRNFFKYFHYIFSFGFLGTVIQFVTITVLAFYSSNTTYLAFLKDDGVPIGLSLHECMLMAAVFSAADEVATLSLIKQ---------------AEYPKLSAVLFGEGVLNDAMSILLFHTV 354
+P QGYALKKRNFFKYFHYIFSFGFLGTVIQF+TITVLA Y+SN+ Y++ L+DDGVPIGLSLHECMLMAAVFSAADEVATLSLIKQ AE+PKLSAVLFGEGVLNDAMSILLF TV
Sbjct: 22 LPPIIFHQGYALKKRNFFKYFHYIFSFGFLGTVIQFITITVLALYASNSQYMSILRDDGVPIGLSLHECMLMAAVFSAADEVATLSLIKQPLLCRDAWERQKRNMAEFPKLSAVLFGEGVLNDAMSILLFQTV 154
BLAST of mRNA_H-paniculata_contig40958.10553.1 vs. uniprot
Match: A0A6H5KYD3_9PHAE (Na_H_Exchanger domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYD3_9PHAE) HSP 1 Score: 197 bits (502), Expect = 2.710e-58 Identity = 100/118 (84.75%), Postives = 108/118 (91.53%), Query Frame = 1
Query: 1 MPSSYVPQGYALKKRNFFKYFHYIFSFGFLGTVIQFVTITVLAFYSSNTTYLAFLKDDGVPIGLSLHECMLMAAVFSAADEVATLSLIKQAEYPKLSAVLFGEGVLNDAMSILLFHTV 354
+P QGYALKKRNFFKYFHYIFSFGFLGTVIQF+TITVLA Y+SN+ Y + L+DDGVPIGLS+HECMLMAAVFSAADEVATLSLIKQAE+PKLSAVLFGEGVLNDAMSILLF TV
Sbjct: 116 LPPIIFHQGYALKKRNFFKYFHYIFSFGFLGTVIQFITITVLALYASNSQYTSMLRDDGVPIGLSVHECMLMAAVFSAADEVATLSLIKQAEFPKLSAVLFGEGVLNDAMSILLFQTV 233
BLAST of mRNA_H-paniculata_contig40958.10553.1 vs. uniprot
Match: A0A835YKQ9_9STRA (Sodium/hydrogen exchanger family-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKQ9_9STRA) HSP 1 Score: 180 bits (456), Expect = 2.660e-52 Identity = 90/118 (76.27%), Postives = 101/118 (85.59%), Query Frame = 1
Query: 1 MPSSYVPQGYALKKRNFFKYFHYIFSFGFLGTVIQFVTITVLAFYSSNTTYLAFLKDDGVPIGLSLHECMLMAAVFSAADEVATLSLIKQAEYPKLSAVLFGEGVLNDAMSILLFHTV 354
+P QGYA KKRNFFKYFH+IFSFG +GT+IQF IT+LA+Y S+ LA ++DDGVPIG SLHECMLMAAV SAADEVATLSLIKQ+EYPKLSAVLFGEGV+NDAMSILLFH V
Sbjct: 132 LPPIIFHQGYAFKKRNFFKYFHHIFSFGIIGTLIQFAVITLLAYYLSSLKSLAIIRDDGVPIGFSLHECMLMAAVLSAADEVATLSLIKQSEYPKLSAVLFGEGVMNDAMSILLFHAV 249
BLAST of mRNA_H-paniculata_contig40958.10553.1 vs. uniprot
Match: A0A4D9D3Z2_9STRA (Na_H_Exchanger domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D3Z2_9STRA) HSP 1 Score: 103 bits (258), Expect = 1.730e-23 Identity = 57/124 (45.97%), Postives = 87/124 (70.16%), Query Frame = 1
Query: 1 MPSSYVPQGYALKKRNFFKYFHYIFSFGFLGTVIQFVTITVLAFYSSNTTYLAF----LKDDGVPIG--LSLHECMLMAAVFSAADEVATLSLIKQAEYPKLSAVLFGEGVLNDAMSILLFHTV 354
+P QGY+LKKRNFF+YFHYIF+ G +GT++ + + LA N +++ + D V G L +++ +L+++V S+ADEVA L+++ + ++PKLSA+LFGEGVLNDA+SILLF +V
Sbjct: 134 LPPIIFYQGYSLKKRNFFRYFHYIFTLGVVGTLMH-MGVVALALIFLNKAWISLGLPLVGWDDVTKGQALEINDILLLSSVLSSADEVAALAMVNKDDHPKLSALLFGEGVLNDAVSILLFRSV 256
BLAST of mRNA_H-paniculata_contig40958.10553.1 vs. uniprot
Match: A0A7S3NVC6_EUPCR (Hypothetical protein (Fragment) n=1 Tax=Euplotes crassus TaxID=5936 RepID=A0A7S3NVC6_EUPCR) HSP 1 Score: 90.5 bits (223), Expect = 6.480e-21 Identity = 49/122 (40.16%), Postives = 75/122 (61.48%), Query Frame = 1
Query: 1 MPSSYVPQGYALKKRNFFKYFHYIFSFGFLGTVIQFVTITVLAFYSSNTTYLAFLKDDGVPIG----LSLHECMLMAAVFSAADEVATLSLIKQAEYPKLSAVLFGEGVLNDAMSILLFHTV 354
+P GY LK++NFFK YI FG LGT+I V ++ ++ D P+G L+ EC+L++AV A D VA L+++K+ E+P L+++LFGEGV+NDA++IL+F +V
Sbjct: 24 LPPIIFGAGYTLKEKNFFKNIGYITLFGLLGTLISMVVMSA---------FVIIFNDYLFPLGHSQRLTTAECLLLSAVLCATDSVAALAIVKETEFPTLNSILFGEGVVNDAVAILIFKSV 136
BLAST of mRNA_H-paniculata_contig40958.10553.1 vs. uniprot
Match: A0A1R2AVU5_9CILI (Na_H_Exchanger domain-containing protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2AVU5_9CILI) HSP 1 Score: 95.5 bits (236), Expect = 1.300e-20 Identity = 49/118 (41.53%), Postives = 75/118 (63.56%), Query Frame = 1
Query: 1 MPSSYVPQGYALKKRNFFKYFHYIFSFGFLGTVIQFVTITVLAFYSSNTTYLAFLKDDGVPIGLSLHECMLMAAVFSAADEVATLSLIKQAEYPKLSAVLFGEGVLNDAMSILLFHTV 354
+P GY LK ++FF +I +G +GT + F+T+ LA++ F++ LSL +C+L+A+V SA D VA +++IK+ +YP+L +LFGEGVLNDA+SI+LF TV
Sbjct: 72 LPPIIFTAGYTLKSQHFFLNIGFILLYGVVGTFLSFITLGSLAYF--------FVEQGAASTTLSLKDCLLLASVLSATDTVAAITVIKETKYPRLHYILFGEGVLNDAVSIVLFRTV 181
BLAST of mRNA_H-paniculata_contig40958.10553.1 vs. uniprot
Match: A0A077ZYX6_STYLE (Sodium hydrogen exchanger n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A077ZYX6_STYLE) HSP 1 Score: 95.5 bits (236), Expect = 1.400e-20 Identity = 51/118 (43.22%), Postives = 74/118 (62.71%), Query Frame = 1
Query: 1 MPSSYVPQGYALKKRNFFKYFHYIFSFGFLGTVIQFVTITVLAFYSSNTTYLAFLKDDGVPIGLSLHECMLMAAVFSAADEVATLSLIKQAEYPKLSAVLFGEGVLNDAMSILLFHTV 354
+P GY LKK+NF F YI FG LGT+I F+ ++ + + ++ L D + LS EC+L+A+V A D VA L+++K+ YP L+++LFGEGV+NDA+SILLF V
Sbjct: 33 LPPIIFAAGYNLKKKNFVSNFGYIALFGVLGTIISFIVLSSMIMFWNDV-----LHSDFSAMRLSSKECLLLASVLCATDTVAALTIVKEKNYPILNSILFGEGVVNDAVSILLFRAV 145
BLAST of mRNA_H-paniculata_contig40958.10553.1 vs. uniprot
Match: A0A7S3IZC5_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Euplotes harpa TaxID=151035 RepID=A0A7S3IZC5_9SPIT) HSP 1 Score: 90.9 bits (224), Expect = 2.130e-19 Identity = 48/118 (40.68%), Postives = 71/118 (60.17%), Query Frame = 1
Query: 1 MPSSYVPQGYALKKRNFFKYFHYIFSFGFLGTVIQFVTITVLAFYSSNTTYLAFLKDDGVPIGLSLHECMLMAAVFSAADEVATLSLIKQAEYPKLSAVLFGEGVLNDAMSILLFHTV 354
+P GY LK+RNF K F+YI G GT+I V + VL + +N Y D+ L EC+L+A+V A D VA L+++K +P L+++LFGEGV+NDA++IL++ V
Sbjct: 18 LPPIIFAAGYTLKRRNFMKNFNYIVLLGVAGTIISMVCLAVLILWFNNLVY-----DEDDESKLKPVECLLLASVLCATDSVAALAIVKGEVFPTLNSILFGEGVVNDAVAILIYQAV 130
BLAST of mRNA_H-paniculata_contig40958.10553.1 vs. uniprot
Match: J9I262_9SPIT (Sodium/hydrogen exchanger n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9I262_9SPIT) HSP 1 Score: 92.0 bits (227), Expect = 2.380e-19 Identity = 48/118 (40.68%), Postives = 72/118 (61.02%), Query Frame = 1
Query: 1 MPSSYVPQGYALKKRNFFKYFHYIFSFGFLGTVIQFVTITVLAFYSSNTTYLAFLKDDGVPIGLSLHECMLMAAVFSAADEVATLSLIKQAEYPKLSAVLFGEGVLNDAMSILLFHTV 354
+P GY LKK+NF F YI FG GT+I F+ ++ + + ++ L + LS EC+L+A+V A D VA L+++K+ YP L+++LFGEGV+ND++SILLF V
Sbjct: 33 LPPIIFAAGYNLKKKNFVSNFGYIAMFGIFGTIISFIVLSSMIIFWND-----LLHSHHSNLRLSSKECLLLASVLCATDTVAALTIVKEKNYPTLNSILFGEGVVNDSVSILLFRAV 145
BLAST of mRNA_H-paniculata_contig40958.10553.1 vs. uniprot
Match: Q23MD1_TETTS (Transporter, monovalent cation:proton antiporter-2 (CPA2) family protein n=1 Tax=Tetrahymena thermophila (strain SB210) TaxID=312017 RepID=Q23MD1_TETTS) HSP 1 Score: 90.5 bits (223), Expect = 8.850e-19 Identity = 45/118 (38.14%), Postives = 71/118 (60.17%), Query Frame = 1
Query: 1 MPSSYVPQGYALKKRNFFKYFHYIFSFGFLGTVIQFVTITVLAFYSSNTTYLAFLKDDGVPIGLSLHECMLMAAVFSAADEVATLSLIKQAEYPKLSAVLFGEGVLNDAMSILLFHTV 354
+P GY LKKR FF+ F YI +G LGT++ F+ + +L + + + D + LS + +L +A A D VA L++IK +YPKL +V+FGEG++ND++SI+L+ V
Sbjct: 72 LPPIIFAGGYNLKKRRFFQNFFYINIYGLLGTIVNFIVVWLLTYAVNEAGLIRRYSDFSQSVTLSTRDILLFSATICATDSVAALAMIKSEKYPKLFSVIFGEGMVNDSVSIILYKAV 189 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig40958.10553.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig40958.10553.1 >prot_H-paniculata_contig40958.10553.1 ID=prot_H-paniculata_contig40958.10553.1|Name=mRNA_H-paniculata_contig40958.10553.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=118bp MPSSYVPQGYALKKRNFFKYFHYIFSFGFLGTVIQFVTITVLAFYSSNTTback to top mRNA from alignment at H-paniculata_contig40958:144..1276+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig40958.10553.1 ID=mRNA_H-paniculata_contig40958.10553.1|Name=mRNA_H-paniculata_contig40958.10553.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1133bp|location=Sequence derived from alignment at H-paniculata_contig40958:144..1276+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig40958:144..1276+ >mRNA_H-paniculata_contig40958.10553.1 ID=mRNA_H-paniculata_contig40958.10553.1|Name=mRNA_H-paniculata_contig40958.10553.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=708bp|location=Sequence derived from alignment at H-paniculata_contig40958:144..1276+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |