mRNA_H-paniculata_contig4081.10537.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig4081.10537.1
Unique NamemRNA_H-paniculata_contig4081.10537.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig4081.10537.1 vs. uniprot
Match: D7FYS4_ECTSI (40S ribosomal protein S14 n=3 Tax=Sar TaxID=2698737 RepID=D7FYS4_ECTSI)

HSP 1 Score: 286 bits (732), Expect = 3.290e-93
Identity = 147/151 (97.35%), Postives = 149/151 (98.68%), Query Frame = 2 
Query:   41 MSGKKDKEEKVEERVTLGPKVAEGENVFGVAHIFASFNDTFVHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 493
            M+ KK KE+KVEERVTLGPKVAEGENVFGVAHIFASFNDTFVHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL
Sbjct:    1 MADKKTKEDKVEERVTLGPKVAEGENVFGVAHIFASFNDTFVHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 151
[Close]
BLAST of mRNA_H-paniculata_contig4081.10537.1 vs. uniprot
Match: K3YAJ9_SETIT (Uncharacterized protein n=7 Tax=Magnoliopsida TaxID=3398 RepID=K3YAJ9_SETIT)

HSP 1 Score: 261 bits (668), Expect = 1.520e-83
Identity = 133/151 (88.08%), Postives = 140/151 (92.72%), Query Frame = 2 
Query:   41 MSGKKDKEEKVEERVTLGPKVAEGENVFGVAHIFASFNDTFVHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 493
            MSG+K   E  EE VTLGP V EGE VFGVAHIFASFNDTF+HITDLSGRETMVR+TGGMKVKADRDE+SPYAAMLAAQDVA RCKELGITALHIK+RATGGNKTKTPGPGAQSALRALAR+GMKIGRIEDVTP+PTD TRRKGGRRGRRL
Sbjct:    1 MSGRKKTREPKEENVTLGPAVREGEYVFGVAHIFASFNDTFIHITDLSGRETMVRITGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPVPTDSTRRKGGRRGRRL 151
[Close]
BLAST of mRNA_H-paniculata_contig4081.10537.1 vs. uniprot
Match: W1PY91_AMBTC (Uncharacterized protein n=8 Tax=Magnoliopsida TaxID=3398 RepID=W1PY91_AMBTC)

HSP 1 Score: 260 bits (665), Expect = 4.300e-83
Identity = 131/151 (86.75%), Postives = 141/151 (93.38%), Query Frame = 2 
Query:   41 MSGKKDKEEKVEERVTLGPKVAEGENVFGVAHIFASFNDTFVHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 493
            MSG+K   E  EE VTLGP V EGE+VFGVAH+FASFNDTFVH+TDLSGRET+VR+TGGMKVKADRDE+SPYAAMLAAQDVA RCKELGITALHIK+RATGGNKTKTPGPGAQSALRALAR+GM+IGRIEDVTPIPTD TRRKGGRRGRRL
Sbjct:    1 MSGRKKTREPKEENVTLGPTVREGEHVFGVAHVFASFNDTFVHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMRIGRIEDVTPIPTDSTRRKGGRRGRRL 151
[Close]
BLAST of mRNA_H-paniculata_contig4081.10537.1 vs. uniprot
Match: A0A7S2HU48_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HU48_9STRA)

HSP 1 Score: 261 bits (666), Expect = 5.600e-83
Identity = 130/147 (88.44%), Postives = 141/147 (95.92%), Query Frame = 2 
Query:   53 KDKEEKVEERVTLGPKVAEGENVFGVAHIFASFNDTFVHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 493
            KD E+ VEE  T+G KVA+GEN+FGVAHIFASFNDTFVH+TDLSGRET+VRVTGGMKVKADRDEASPYAAMLAAQDVAA+CK++GITALHIKMRATGGNKTKTPGPGAQSALRALARAG+KIGRIEDVTPIP+DCTRRK GRRGRRL
Sbjct:   23 KDAEQPVEEMTTIGAKVADGENLFGVAHIFASFNDTFVHVTDLSGRETIVRVTGGMKVKADRDEASPYAAMLAAQDVAAKCKDIGITALHIKMRATGGNKTKTPGPGAQSALRALARAGLKIGRIEDVTPIPSDCTRRKSGRRGRRL 169
[Close]
BLAST of mRNA_H-paniculata_contig4081.10537.1 vs. uniprot
Match: A0A804IE59_MUSAM ((wild Malaysian banana) hypothetical protein n=2 Tax=Petrosaviidae TaxID=1437197 RepID=A0A804IE59_MUSAM)

HSP 1 Score: 260 bits (664), Expect = 6.090e-83
Identity = 131/151 (86.75%), Postives = 140/151 (92.72%), Query Frame = 2 
Query:   41 MSGKKDKEEKVEERVTLGPKVAEGENVFGVAHIFASFNDTFVHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 493
            MSG+K   E  E+ VTLGP V EGE VFGVAHIFASFNDTF+H+TDLSGRET+VR+TGGMKVKADRDE+SPYAAMLAAQDVA RCKELGITALHIK+RATGGNKTKTPGPGAQSALRALAR+GMKIGRIEDVTPIPTD TRRKGGRRGRRL
Sbjct:    1 MSGRKKTREPKEDNVTLGPAVREGEQVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDSTRRKGGRRGRRL 151
[Close]
BLAST of mRNA_H-paniculata_contig4081.10537.1 vs. uniprot
Match: A0A218V1C4_9PASE (40S ribosomal protein S14 n=5 Tax=Gnathostomata TaxID=7776 RepID=A0A218V1C4_9PASE)

HSP 1 Score: 260 bits (664), Expect = 8.850e-83
Identity = 130/155 (83.87%), Postives = 145/155 (93.55%), Query Frame = 2 
Query:   29 FASSMSGKKDKEEKVEERVTLGPKVAEGENVFGVAHIFASFNDTFVHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 493
            F S M+ +K KE+K E+ ++LGP+VAEGENVFGV HIFASFNDTFVH+TDLSG+ET+ RVTGGMKVKADRDE+SPYAAMLAAQDVA RCKELGITALHIK+RATGGN+TKTPGPGAQSALRALAR+GMKIGRIEDVTPIP+D TRRKGGRRGRRL
Sbjct:    8 FCSEMAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKGGRRGRRL 162
[Close]
BLAST of mRNA_H-paniculata_contig4081.10537.1 vs. uniprot
Match: A0A835RMY5_VANPL (Uncharacterized protein n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835RMY5_VANPL)

HSP 1 Score: 261 bits (666), Expect = 1.180e-82
Identity = 131/150 (87.33%), Postives = 142/150 (94.67%), Query Frame = 2 
Query:   44 SGKKDKEEKVEERVTLGPKVAEGENVFGVAHIFASFNDTFVHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 493
            SG++  +E  EE VTLGPKV EGE+VFGVAHIFASFNDTF+H+TDLSGRET+VR+TGGMKVKADRDE+SPYAAMLAAQDVA RCKELGITALHIK+RATGGNKTKTPGPGAQSALRALAR+GMKIGRIEDVTPIPTD TRRKGGRRGRRL
Sbjct:   42 SGRRKAKETKEETVTLGPKVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDSTRRKGGRRGRRL 191
[Close]
BLAST of mRNA_H-paniculata_contig4081.10537.1 vs. uniprot
Match: UPI002026396C (40S ribosomal protein S14 isoform X1 n=1 Tax=Sphaerodactylus townsendi TaxID=933632 RepID=UPI002026396C)

HSP 1 Score: 259 bits (663), Expect = 1.530e-82
Identity = 131/162 (80.86%), Postives = 148/162 (91.36%), Query Frame = 2 
Query:    8 LVWQQPPFASSMSGKKDKEEKVEERVTLGPKVAEGENVFGVAHIFASFNDTFVHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 493
            + WQ+P     M+ +K KE+K E+ ++LGP+VAEGENVFGV HIFASFNDTFVH+TDLSG+ET+ RVTGGMKVKADRDE+SPYAAMLAAQDVA RCKELGITALHIK+RATGGN+TKTPGPGAQSALRALAR+GMKIGRIEDVTPIP+D TRRKGGRRGRRL
Sbjct:   10 VYWQKP---GEMAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKGGRRGRRL 168
[Close]
BLAST of mRNA_H-paniculata_contig4081.10537.1 vs. uniprot
Match: K3YWE6_SETIT (Uncharacterized protein n=5 Tax=Paniceae TaxID=147428 RepID=K3YWE6_SETIT)

HSP 1 Score: 259 bits (661), Expect = 1.730e-82
Identity = 130/151 (86.09%), Postives = 140/151 (92.72%), Query Frame = 2 
Query:   41 MSGKKDKEEKVEERVTLGPKVAEGENVFGVAHIFASFNDTFVHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 493
            MSG+K   E  EE VTLGP V EGE VFGVAHIFASFNDTF+H+TDLSGRET+VR+TGGMKVKADRDE+SPYAAMLA+QDVA RCKELGITALHIK+RATGGNKTKTPGPGAQSALRALAR+GMKIGRIEDVTP+PTD TRRKGGRRGRRL
Sbjct:    1 MSGRKKTREPKEENVTLGPAVREGEYVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLASQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPVPTDSTRRKGGRRGRRL 151
[Close]
BLAST of mRNA_H-paniculata_contig4081.10537.1 vs. uniprot
Match: A0A674GH01_TAEGU (Uncharacterized protein n=3 Tax=Euteleostomi TaxID=117571 RepID=A0A674GH01_TAEGU)

HSP 1 Score: 259 bits (662), Expect = 1.770e-82
Identity = 130/156 (83.33%), Postives = 145/156 (92.95%), Query Frame = 2 
Query:   26 PFASSMSGKKDKEEKVEERVTLGPKVAEGENVFGVAHIFASFNDTFVHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 493
            P  S M+ +K KE+K E+ ++LGP+VAEGENVFGV HIFASFNDTFVH+TDLSG+ET+ RVTGGMKVKADRDE+SPYAAMLAAQDVA RCKELGITALHIK+RATGGN+TKTPGPGAQSALRALAR+GMKIGRIEDVTPIP+D TRRKGGRRGRRL
Sbjct:    7 PCCSEMAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKGGRRGRRL 162
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4081.10537.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYS4_ECTSI3.290e-9397.3540S ribosomal protein S14 n=3 Tax=Sar TaxID=269873... [more]
K3YAJ9_SETIT1.520e-8388.08Uncharacterized protein n=7 Tax=Magnoliopsida TaxI... [more]
W1PY91_AMBTC4.300e-8386.75Uncharacterized protein n=8 Tax=Magnoliopsida TaxI... [more]
A0A7S2HU48_9STRA5.600e-8388.44Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A804IE59_MUSAM6.090e-8386.75(wild Malaysian banana) hypothetical protein n=2 T... [more]
A0A218V1C4_9PASE8.850e-8383.8740S ribosomal protein S14 n=5 Tax=Gnathostomata Ta... [more]
A0A835RMY5_VANPL1.180e-8287.33Uncharacterized protein n=1 Tax=Vanilla planifolia... [more]
UPI002026396C1.530e-8280.8640S ribosomal protein S14 isoform X1 n=1 Tax=Sphae... [more]
K3YWE6_SETIT1.730e-8286.09Uncharacterized protein n=5 Tax=Paniceae TaxID=147... [more]
A0A674GH01_TAEGU1.770e-8283.33Uncharacterized protein n=3 Tax=Euteleostomi TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4081contigH-paniculata_contig4081:8195..11901 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score286.6
Seed ortholog evalue6.9e-75
Seed eggNOG ortholog2880.D7FYS4
Preferred nameRPS14
KEGG rclassRC00002,RC02753
KEGG koko:K01000,ko:K02955
KEGG TC9.B.146
KEGG ReactionR05629,R05630
KEGG Pathwayko00550,ko01100,ko01502,ko03010,map00550,map01100,map01502,map03010
KEGG ModuleM00177
Hectar predicted targeting categoryother localisation
GOsGO:0000028,GO:0000122,GO:0000184,GO:0000462,GO:0000956,GO:0002181,GO:0002262,GO:0002376,GO:0002520,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005773,GO:0005774,GO:0005829,GO:0005840,GO:0005844,GO:0005886,GO:0005911,GO:0006139,GO:0006355,GO:0006357,GO:0006364,GO:0006396,GO:0006401,GO:0006402,GO:0006412,GO:0006413,GO:0006417,GO:0006518,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006996,GO:0007275,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009506,GO:0009507,GO:0009536,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015031,GO:0015833,GO:0015935,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0016072,GO:0019219,GO:0019222,GO:0019439,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030054,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0030490,GO:0030684,GO:0030686,GO:0031090,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031974,GO:0031981,GO:0032040,GO:0032268,GO:0032501,GO:0032502,GO:0032991,GO:0033036,GO:0033365,GO:0034101,GO:0034248,GO:0034470,GO:0034613,GO:0034622,GO:0034641,GO:0034645,GO:0034655,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0042592,GO:0042788,GO:0042886,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044428,GO:0044437,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045047,GO:0045182,GO:0045184,GO:0045892,GO:0045934,GO:0046483,GO:0046700,GO:0046907,GO:0048027,GO:0048513,GO:0048519,GO:0048523,GO:0048534,GO:0048731,GO:0048856,GO:0048869,GO:0048872,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051179,GO:0051234,GO:0051246,GO:0051252,GO:0051253,GO:0051641,GO:0051649,GO:0055044,GO:0060255,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0070181,GO:0070727,GO:0070925,GO:0070972,GO:0071702,GO:0071704,GO:0071705,GO:0071826,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0080090,GO:0090150,GO:0090304,GO:0097159,GO:0098588,GO:0098805,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902679,GO:1903506,GO:1903507,GO:1990904,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.mRNA 5'-UTR binding
EggNOG OGsCOG0100@1,KOG0407@2759
Ec32 ortholog descriptionRibosomal protein S11
Ec32 orthologEc-19_002330.1
EC2.7.8.13
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko01000,ko01011,ko03011
Exons5
Model size1284
Cds size456
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930248.2208-UTR-H-paniculata_contig4081:8194..89821622930248.2208-UTR-H-paniculata_contig4081:8194..8982Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4081 8195..8982 -
1691481209.2469046-UTR-H-paniculata_contig4081:8194..89821691481209.2469046-UTR-H-paniculata_contig4081:8194..8982Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4081 8195..8982 -
1622930248.3250504-UTR-H-paniculata_contig4081:11861..119011622930248.3250504-UTR-H-paniculata_contig4081:11861..11901Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4081 11862..11901 -
1691481209.3083596-UTR-H-paniculata_contig4081:11861..119011691481209.3083596-UTR-H-paniculata_contig4081:11861..11901Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4081 11862..11901 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930248.2342281-CDS-H-paniculata_contig4081:8982..90631622930248.2342281-CDS-H-paniculata_contig4081:8982..9063Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4081 8983..9063 -
1691481209.2624745-CDS-H-paniculata_contig4081:8982..90631691481209.2624745-CDS-H-paniculata_contig4081:8982..9063Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4081 8983..9063 -
1622930248.2529798-CDS-H-paniculata_contig4081:9432..95491622930248.2529798-CDS-H-paniculata_contig4081:9432..9549Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4081 9433..9549 -
1691481209.2729037-CDS-H-paniculata_contig4081:9432..95491691481209.2729037-CDS-H-paniculata_contig4081:9432..9549Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4081 9433..9549 -
1622930248.269459-CDS-H-paniculata_contig4081:9928..100601622930248.269459-CDS-H-paniculata_contig4081:9928..10060Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4081 9929..10060 -
1691481209.2832909-CDS-H-paniculata_contig4081:9928..100601691481209.2832909-CDS-H-paniculata_contig4081:9928..10060Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4081 9929..10060 -
1622930248.2875378-CDS-H-paniculata_contig4081:10505..106281622930248.2875378-CDS-H-paniculata_contig4081:10505..10628Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4081 10506..10628 -
1691481209.2913296-CDS-H-paniculata_contig4081:10505..106281691481209.2913296-CDS-H-paniculata_contig4081:10505..10628Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4081 10506..10628 -
1622930248.3056448-CDS-H-paniculata_contig4081:11858..118611622930248.3056448-CDS-H-paniculata_contig4081:11858..11861Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4081 11859..11861 -
1691481209.299333-CDS-H-paniculata_contig4081:11858..118611691481209.299333-CDS-H-paniculata_contig4081:11858..11861Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4081 11859..11861 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4081.10537.1prot_H-paniculata_contig4081.10537.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig4081 8983..11861 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig4081.10537.1

>prot_H-paniculata_contig4081.10537.1 ID=prot_H-paniculata_contig4081.10537.1|Name=mRNA_H-paniculata_contig4081.10537.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=152bp
MSGKKDKEEKVEERVTLGPKVAEGENVFGVAHIFASFNDTFVHITDLSGR
ETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRAT
GGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRR
L*
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mRNA from alignment at H-paniculata_contig4081:8195..11901-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig4081.10537.1 ID=mRNA_H-paniculata_contig4081.10537.1|Name=mRNA_H-paniculata_contig4081.10537.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3707bp|location=Sequence derived from alignment at H-paniculata_contig4081:8195..11901- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTCTCCCCTTGTTTGGCAGCAGCCGCCGTTCGCTTCAAGTATGGTAAGTG
TCCCTCAGCTACTACTATTGCCCTAAACTGCACTGGTTTTCAGCTTACTT
GCGTGTGTCCTTGGATTCGTTCAGCTCTCTTTTGGATGGAGCGCCGCGCG
TGAGATTCTAGGCTTATTCTCCACCAGGCGATGGTGGGAGGCAACTGGGT
TTGTACCTGTACTGTTTACCGTGCATCTGCCGCTTGCCCTATGGCTACGG
CGCGTGCTAGTTCGGTGGTGTGGGGCCTTGTACATAACTCCGTGACTGAT
GTTCTGAACCTCTTCATGTATTCAATACTGCTGTGATGTGGTGTTCGTCG
TGCGATGGAACGATGGGGCTTGATCGATATGGAGTAAGGGTGGGTTTGTC
TACGATTTGCATGACTGACTGTCTCGTTCTGATGTGAGACACCATGTATC
TGGCCATTCCTGCCGAATAACCCCAAAATAAGAAATCCAGTTGTTTGCAA
TTGGGATAATGTATTCCGCAAGCTTGGTGTAGGTTCGCTGCTTGTGGTCA
GGGTTTACTGTTGGCTAAACCGTATGTGATGTGATGTCAAGCGTCGATAT
TTCTATACTGGACAAGTTGTGTTGCGAAATGGACCGACTCCAGTGCGCTT
GCCTACTGGTGGATGCCTCCAGGAAAACTGCAACGCCTGATGACGGCTGG
CGATACCGAGGCGATGTGTGTCATAGTGCTAGTTCATCATGAATTCGTTG
GGGTGTACACCTCCAGCTACTAGTATCGTGCATGTGAAGTTTGTTCCACG
GTGAAAACATGAAATGACATTTCTCACGACAGTAGTTGGATTTCCTCACC
GGCTCTGTCTGCCTTGGCCGTTCGCTGTGCAATAAATCCATATGATGGAT
GTTCATTGGAACATGAACGTACTGGAACCCTTCTCACTGTTGGCGACCAA
AACCGTCCTGTGCTTATTTTGTTCTCGGTAATATTGGATACCTTTTTGAA
TTGTGACCTGTGATTATTCCCCTTGTTGGCTCTGACGGTCCTGTTGGGTG
CAGTACGTTTCTGGGGTTCCTGCAGCACAGGGTGAAGTTAGGTTCTACTT
CTGCAAAACCTGCTTCGAAAGTTGCTTTTTATCATTTCATCAGTGTAGTA
CGCTCACGTCTTGTCTGCAAAATACTCGAATACGGTGGATTGGGAAAACA
TGTTGGTAACACTTTTCCGAACCCATATTTTCGTCTGTGGTTTGACTCAT
GTGTCCTGTCGATGTTGGAGCAGTCTGGCAAAAAGGACAAGGAGGAGAAG
GTAGAGGAGAGGGTAACCCTCGGGCCGAAGGTGGCGGAGGGAGAGAACGT
GTTCGGCGTGGCTCACATCTTCGCTTCCTTCAACGACACCTTTGTGGTGA
GTCCTAATGTAATATTTTTTTCATCACATATCCTGCCCCTTGTGCATGGA
CTTTCCAAGCCTGCGAGGGGTTCTTCACGGACCGTTTGGTCTTTCATTTT
TTTTCGCATATCCGACTGTTTTGTCCGTGCAACGTCGCACGGCCTCGGCT
AGGATATATTCTGGCCAACAAGCCTGAGACTAGTCTGGACATGAAAAGGT
TTTACCTGAAACTGGGGTTGTTCATGAGGGCAGTCGAGCACGATTGTGGA
GTATGGATCAAACTCTTGCGTCAATAAGGCGGTGTCTGAGGAACATATTA
TCGATTTGGACCTTGGTACAGTCGAAGATGCGTAAAGTTGAAACTCACTT
TGGGTGATTGGTTCCTCGAAACTGGGGGAATGATCAAAATGTACTCTAGC
GAATACGAAGCTTAAATTATTTCATCTTGTGGAATTTTCAGCATATCACG
GACCTGTCCGGAAGGGAAACCATGGTGCGCGTCACTGGTGGCATGAAGGT
GAAGGCTGACCGTGACGAGGCGTCGCCGTATGCGGCAATGCTTGCGGCTC
AGGATGTGGCAGCTCGCTGCAAGGTGAGAGGGCACAAAAAATCAGTATTT
TACCCTTTTGACAGAAGGCGCATTAACAGACATATAGTCATGATTGAAGT
ATATCATAGTGGAGAACTCGTGTCAGCGTGCGTCCGTACTCCTGGGTCGA
AGCCACTCGTCGGAGCGGCACAAGGAAGCGGTACGCCCATCTTTCCAATC
AGCAAAATGAGCACATTTTCGACGAAAATGCAGAAAAAACTGCGGCCGTG
ATGCGATTTGTGTCGAATTCGCTGTTGCGCTTGTTGATCATTGGCCGGGT
CTATCGGCAGGTAGAATAGTTTGAGGTCGTACCCCATTGAAACACTGAGG
ATCTGAACGTTGACATACGAGCCAACTCATACTCGATTGATCTTGGCAAC
AGGAGCTGGGCATCACAGCCCTCCACATCAAGATGCGTGCCACAGGTGGT
AACAAGACCAAGACCCCAGGCCCGGGCGCGCAGTCTGCCCTCCGTGCGCT
TGCACGTGCGGGCATGAAGGTAAATTTTTTGTTTCGTAGCTTGCCGTTGT
GCTTTTTACTCTCCTCGTGCCGAACGTGTTTTCTTGGCCTGACGGCAGCC
CAACATTGCCGATTCACAGATGAATCTTGTGCCTTTCACATAATCATTTC
GAGTCTTTCACCTCGAGGATTTGCCTCATTTGGCAAGAGGATCTCATGAA
TGATCCTCCTATATCAATGCACCGCGTTGGCGACCTCCTACAGCAGCCTC
AAGTACTATTTTGAACATGTATGGTATGGATTGATCACTTCGAAAACCAG
ATTCCGAAATACGAATCCTTATTTATCCATCAACCTTGTCCACCCTTGGC
CCCCGTCGATTCTATTGTCTTCTGTTCGTATTATTCAGATTGGCCGTATC
GAAGACGTCACCCCGATCCCGACCGATTGCACACGCCGGAAGGGTGGTCG
CCGTGGTCGCCGTCTCTAGGGGAAATGCTTTTGTACTGTTCAGAGTGTGC
CATTGGAGTTCCTTCTCGCCGATTTCCTGTTTTTGCGTGGGCATGGGGTA
GAAGGGTTCTCCGATCTTCACAACGGGACTGCGTTGAGAGTCTCGTGATA
AGAATGCACGATGTGCAGCTACGCACTTCGAGAACGTATCTTGACCAGTC
TTCTTGATCACTGAAGGAGTTCTTGATTGTCTGGATCGTTCTTGATTTTT
GTCGGGGATGAAGCGTGCGGTTAATAACTAAAAGGGGTCGCCAGCCACAC
CTATGCGTCCAAGTATCATGTTTTGTCTTCAACGCCTGGTTTGTCGTAAC
CCGTTTTAAAACGTGAAAATCGTGTACTGAAAGCAAACTCCCACCGTGTT
CGTGAGACGGGAACCTTGATTTATCAGTTTTCCTTCGTGCTTGATTTTCA
ACATCATGTTCAGCGATAGCCAGGTGGATCAATTGAACGGTCGATGCGCG
TTGTGAGCGGTCTTCAAACTGAGATGAAGAAAATGAATGATTGTCATGAA
GATACGGTGCATCAAGATGCGACACGAATTTGCCTGGCACGTCATGAAAT
TTCGCCCACAACAATGATTCGGAATACCTTCAGCGTACGTTTACGAATGA
TTACGCGTGTTGTGGTTCTGGAAACAATCGCTCTACTGCAGCCAGCACTG
ATGATTCATATATCTATCACCATCGAGTAACACAAAAGGATTAGTCGGGA
AATCTGCTTCTAGGGCTATATTACAAATAATTTTTATTTCATCTACTTAA
AAAGGAG
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Coding sequence (CDS) from alignment at H-paniculata_contig4081:8195..11901-

>mRNA_H-paniculata_contig4081.10537.1 ID=mRNA_H-paniculata_contig4081.10537.1|Name=mRNA_H-paniculata_contig4081.10537.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=912bp|location=Sequence derived from alignment at H-paniculata_contig4081:8195..11901- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGATGTCTGGCAAAAAGGACAAGGAGGAGAAGGTAGAGGAGAGGGTAAC
CCTCGGGCCGAAGGTGGCGGAGGGAGAGAACGTGTTCGGCGTGGCTCACA
TCTTCGCTTCCTTCAACGACACCTTTGTGTCTGGCAAAAAGGACAAGGAG
GAGAAGGTAGAGGAGAGGGTAACCCTCGGGCCGAAGGTGGCGGAGGGAGA
GAACGTGTTCGGCGTGGCTCACATCTTCGCTTCCTTCAACGACACCTTTG
TGCATATCACGGACCTGTCCGGAAGGGAAACCATGGTGCGCGTCACTGGT
GGCATGAAGGTGAAGGCTGACCGTGACGAGGCGTCGCCGTATGCGGCAAT
GCTTGCGGCTCAGGATGTGGCAGCTCGCTGCAAGCATATCACGGACCTGT
CCGGAAGGGAAACCATGGTGCGCGTCACTGGTGGCATGAAGGTGAAGGCT
GACCGTGACGAGGCGTCGCCGTATGCGGCAATGCTTGCGGCTCAGGATGT
GGCAGCTCGCTGCAAGGAGCTGGGCATCACAGCCCTCCACATCAAGATGC
GTGCCACAGGTGGTAACAAGACCAAGACCCCAGGCCCGGGCGCGCAGTCT
GCCCTCCGTGCGCTTGCACGTGCGGGCATGAAGGAGCTGGGCATCACAGC
CCTCCACATCAAGATGCGTGCCACAGGTGGTAACAAGACCAAGACCCCAG
GCCCGGGCGCGCAGTCTGCCCTCCGTGCGCTTGCACGTGCGGGCATGAAG
ATTGGCCGTATCGAAGACGTCACCCCGATCCCGACCGATTGCACACGCCG
GAAGGGTGGTCGCCGTGGTCGCCGTCTCTAGATTGGCCGTATCGAAGACG
TCACCCCGATCCCGACCGATTGCACACGCCGGAAGGGTGGTCGCCGTGGT
CGCCGTCTCTAG
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