mRNA_H-paniculata_contig407.10515.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig407.10515.1 vs. uniprot
Match: D8LQ25_ECTSI (Transposase n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LQ25_ECTSI) HSP 1 Score: 359 bits (921), Expect = 3.260e-113 Identity = 224/524 (42.75%), Postives = 282/524 (53.82%), Query Frame = 1
Query: 1 STVEVSQSRSILLIYFDLVQSGMGANPAIKETARVMRVGTKKVYQVRTCWWDQKLNMTTSGEGQ------DARAVLSKPQVAEFRSFINAKHEEGKQVFGRTVGEWIKAKCRHRISNRGVGVLLYRVGYRRRRGRIKVPPLNDGRKTRI*LFLVEFYGALTKEEAETAVIACMDESFCHQLHGSAYSYFFTDEHGVLPDGMGRTSGKGQRLIMVHAVTKEGPLAARDDTGFPRRGGSNLRNRIRVGKGRG*WMKKTSQRCFGRPKLPQWFATLP*PIKCSWSGSKNVWR*LSKLLSETR*FLFSITRRTTTGMTRRSGCLRPKPRSTIQNCC------ANIRLEESLFNGKN---------RTVAVERRL*CAI-LKHQKLD----------------GSQTRTPDVAVVLAVRR*RCLLELSFSLDFSTNLWRKLRCSWRSEGGS*SG-PLLHAVFSPTELFWQHGKQYISFDYDMKRIIKQVWEQVRKRCYGDKKWEGQDGGWKPANCVKLVAHAFEEVNKW 1455
S ++ SQSRSILL YF+LVQSG+ N A++ TA +RVG KV++VR WW++ +T+S EG+ D R +L Q A R+FI+ KHE G+QVF RTV EWIK C +SNR VG LLYR+GYRRRRGRIK+PPLND RK RI FLVE ALT+EE E AVI MDESFCHQLHGSAYSYF TD+ GV+ DGMGRTSGKG R+IMVHA+TK G LAA D+ FP + +G W K + G+ + + W + + + F+ + RR + G K + N A + + ES G N R + VER + + ++ +K G P+VA LA R F L T L K+ G P F P ELFWQHGKQY+SF++ KR + +VW QVRK YGD WEGQ GGWKPA+C KLVAHA +E+NKW
Sbjct: 97 SLLDTSQSRSILLTYFELVQSGVEPNKAVQRTASTLRVGKDKVFKVRAHWWEKTELLTSSAEGRGVSSGKDGRKLLDDVQCANLRAFISDKHENGQQVFRRTVREWIKETCNKDLSNRAVGGLLYRIGYRRRRGRIKIPPLNDDRKARIRRFLVEMSAALTQEEKEEAVIVYMDESFCHQLHGSAYSYFLTDDDGVVQDGMGRTSGKGLRMIMVHAITKGGALAAVDENNFP------------IPEG---WFKPKDK---GKGRQGAGSMGTEETAEMLWQAKRATGDYHDAMTDKM--FMEWLERRLAPAFKAKYG--NKKMILVLDNASYHHGYDAEVGVPESNSKGYNTALLRKYKCRKITVEREVTSSAGVRSKKYTFQVPATGTFPQANSKCGKGVSGPEVA--LATRA-------FFQLKHPTKLMEKVETFMNGRGWQLIWTPPYMPSFQPIELFWQHGKQYVSFNFKTKRTMAEVWAQVRKGWYGDPTWEGQKGGWKPADCSKLVAHAVKEMNKW 589
BLAST of mRNA_H-paniculata_contig407.10515.1 vs. uniprot
Match: A0A6H5KZM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZM0_9PHAE) HSP 1 Score: 280 bits (717), Expect = 6.860e-86 Identity = 141/232 (60.78%), Postives = 171/232 (73.71%), Query Frame = 1
Query: 1 STVEVSQSRSILLIYFDLVQSGMGANPAIKETARVMRVGTKKVYQVRTCWWDQKLNMTTSGEGQ------DARAVLSKPQVAEFRSFINAKHEEGKQVFGRTVGEWIKAKCRHRISNRGVGVLLYRVGYRRRRGRIKVPPLNDGRKTRI*LFLVEFYGALTKEEAETAVIACMDESFCHQLHGSAYSYFFTDEHGVLPDGMGRTSGKGQRLIMVHAVTKEGPLAARDDTGFP 678
S +++SQSRSILL YF+LVQSG+ N A++ TA +RVG KV++VR WW++ + +S EG+ D R +L Q A R+FI+ KHE G+QVF RTV EWIK +C +SNR VG LLYR+GYRRR GRIK+PPLND RK RI FLVE ALT+EE E AVI MDESFCHQLHGSAYSYF TD++GV+ DGMGRTSGKG R+IMVHA+TK G LAA D+ FP
Sbjct: 97 SLLDISQSRSILLTYFELVQSGVEPNKAVQRTAATLRVGKDKVFKVRAHWWEKTELLASSAEGRGVSSGKDGRKLLDDVQCASLRAFISDKHENGQQVFRRTVREWIKERCNKDLSNRAVGGLLYRIGYRRRGGRIKIPPLNDDRKARIRRFLVEMSAALTQEEKEEAVIVYMDESFCHQLHGSAYSYFLTDDNGVVQDGMGRTSGKGLRMIMVHAITKGGALAAVDENNFP 328
BLAST of mRNA_H-paniculata_contig407.10515.1 vs. uniprot
Match: D8LNM6_ECTSI (DDE_3 domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LNM6_ECTSI) HSP 1 Score: 281 bits (720), Expect = 2.770e-83 Identity = 191/518 (36.87%), Postives = 260/518 (50.19%), Query Frame = 1
Query: 19 QSRSILLIYFDLVQSGMGANPAIKETARVMRVGTKKVYQVRTCWWD--QKLNMTTSGEGQ-----DARAVLSKPQVAEFRSFINAKHEEGKQVFGRTVGEWIKAKCR-HRISNRGVGVLLYRVGYRRRRGRIKVPPLNDGRKTRI*LFLVEFYGALTKEEAETAVIACMDESFCHQLHGSAYSYFFTDEHGVLPDGMGRTSGKGQRLIMVHAVTKEGPLAARDDTGFPRRGGSNLRNRIRVGKGRG*WMKKTSQRCFGRPKLPQ-------WFATLP*PIKCSWSGSKNVWR*LSKLLSETR*FLFSITRRTTTGMTRRSGCLRPKPRSTIQNCCANIRLEESLFNGKNRTVAVERRL*CAILKHQKLDGSQ--------------------TRTPDVA---VVLAVRR*RCLLELSFSLDFSTNLWRKLRCSWRSEGGS*SG-PLLHAVFSPTELFWQHGKQYISFDYDMKRIIKQVWEQVRKRCYGDKKWEGQDGGWKPANCVKLVAHAFEEVNKW 1455
QSR +L++ FDL + G N A+ + AR ++G KV ++ WWD Q T +G G+ D R L++ Q + R FIN +H+ G+QVF RTV EW+ C + SNR VG LL R+GY+RRRGRIK PPLN R RI FLVE A E+A AVI MDESF HQ HGS YSYF +DE+GV+ DG+GRT+GKG R+IMVHA+TK GPLA D GFP I G W K+T G+ K+ W A L K + + + E S + L S A +++ E+ N K V + R+ ++ ++ +G Q R V+ V A R L++ L ++ + +G + P F P ELFWQHGKQY+S ++++KR +++VW Q+R+ YGDK+W GQ+GGWK ANC KLV HA E+NKW
Sbjct: 137 QSRMVLMLLFDLRKEGRSENEAVLQVARTFKIGHDKVRRINNHWWDHRQLYETTAAGRGKMAKEDDGRRRLTEVQADQLREFINDEHKAGRQVFRRTVAEWVHRTCNMEQPSNRSVGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDENGVVQDGIGRTTGKGLRMIMVHAITKWGPLAKFCD-GFP----------IEEG-----WFKETGS---GKKKMEDEETAEFLWQAKL---AKGDYHAAMT-----DSMFMEWLEHRLSPAYNAIPEFEGKKMILVLDNASYHHGFDAEVKVPET--NTKKHNVDLLRKFGAKSIRVKRKEGEQGFVEHNFEVPSEPGSSFPAGNREGGVSRAEVATATRE-------YIRLNYPERLEERVVTFMKKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFELKRKMREVWVQIRQGWYGDKEWSGQEGGWKAANCSKLVEHAIGEMNKW 618
BLAST of mRNA_H-paniculata_contig407.10515.1 vs. uniprot
Match: A0A6H5KDX2_9PHAE (Uncharacterized protein n=8 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX2_9PHAE) HSP 1 Score: 280 bits (715), Expect = 7.060e-83 Identity = 187/519 (36.03%), Postives = 262/519 (50.48%), Query Frame = 1
Query: 13 VSQSRSILLIYFDLVQSGMGANPAIKETARVMRVGTKKVYQVRTCWWDQKLNMTTSGEGQ-------DARAVLSKPQVAEFRSFINAKHEEGKQVFGRTVGEWIKAKCRHRISNRGVGVLLYRVGYRRRRGRIKVPPLNDGRKTRI*LFLVEFYGALTKEEAETAVIACMDESFCHQLHGSAYSYFFTDEHGVLPDGMGRTSGKGQRLIMVHAVTKEGPLAARDDTGFPRRGG-----SNLRNRIRVGKGRG*WMKKTSQRCFGRPKLP--------------QWFATLP*PIKCSWSGSKNVWR*LSKL-----LSETR*FLFSITRRTTTGMTRRSGCLRPKPRSTIQNCCANIRLEE----SLFNGKNRTVAVERRL*CAILKHQKLDGSQTRTPDVAVVLAVRR*RCLLELSFSLDFSTNLWRKLRCSWRSEG-GS*SGPLLHAVFSPTELFWQHGKQY--ISFDYDMKRIIKQVWEQVRKRCYGDKKWEGQDGGWKPANCVKLVAHAFEEVNKW 1455
+ QSR IL++YFDLV+ G N A ++ A+ +R+GT KV VRT W+D++ T+G+G+ D R V++K Q R FI +HE G+QVF RTV ++++ +SNR VG LL R+G++RRRGRIK+PPLN+ RK RI LFLV+ A E+A AVI MDESF HQ HGSAYSYF +D+ G++ DG+GRT+GKG R+IMVHA+T+ GPLA + GFP R G N +I+ G+ + + + KL QW P + +K ++ L E + +++ + R+ GC K + A E SL N V+ E S TRT F +F L K R +G G P F P ELFWQHGK Y +S ++ R + VW+++R YGD +W+GQ+ GWK ANC KLV HA ++++W
Sbjct: 101 LQQSRIILMLYFDLVKGGSSENHAKEQVAKTLRIGTDKVLAVRTLWYDKQELYETNGKGRGKATSVDDGRRVITKEQEDGLREFIKGEHEAGRQVFRRTVKDYLECSFGLEMSNRAVGGLLQRLGFKRRRGRIKIPPLNEERKNRIRLFLVKMDLAKRAEDAGIAVIVYMDESFVHQAHGSAYSYFPSDDKGIVQDGIGRTTGKGLRMIMVHAITEHGPLAELQE-GFPIREGWFKAKENRAKKIKPGEADFEMSDEQTAEFLWQAKLATGDYHNAMTDGMFMQWLKHRLTPAFDAQFKNKKMFLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTRESEGKAAEYNFEVPAQGSLPNANRNGVSKEE------------IASVTRT------------------YFKKNFPQKLEEKAETYMREKGWGLIWTPPYMPTFQPIELFWQHGKHYHYVSIHFEKGRNVLDVWKKIRLGWYGDPEWDGQERGWKAANCGKLVQHAIGKMDEW 588
BLAST of mRNA_H-paniculata_contig407.10515.1 vs. uniprot
Match: A0A6H5KIM5_9PHAE (DDE_3 domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIM5_9PHAE) HSP 1 Score: 268 bits (684), Expect = 2.370e-78 Identity = 187/518 (36.10%), Postives = 254/518 (49.03%), Query Frame = 1
Query: 19 QSRSILLIYFDLVQSGMGANPAIKETARVMRVGTKKVYQVRTCWWD--QKLNMTTSGEGQ-----DARAVLSKPQVAEFRSFINAKHEEGKQVFGRTVGEWIKAKCR-HRISNRGVGVLLYRVGYRRRRGRIKVPPLNDGRKTRI*LFLVEFYGALTKEEAETAVIACMDESFCHQLHGSAYSYFFTDEHGVLPDGMGRTSGKGQRLIMVHAVTKEGPLAARDDTGFPRRGGSNLRNRIRVGKGRG*WMKKTSQRCFGRPKLPQ-------WFATLP*PIKCSWSGSKNVWR*LSKLLSETR*FLFSITRRTTTGMTRRSGCLRPKPRSTIQNCCANIRLEESLFNGKNRTVAVERRL*CAILKHQKLDGSQ--------------------TRTPDVA---VVLAVRR*RCLLELSFSLDFSTNLWRKLRCSWRSEGGS*SG-PLLHAVFSPTELFWQHGKQYISFDYDMKRIIKQVWEQVRKRCYGDKKWEGQDGGWKPANCVKLVAHAFEEVNKW 1455
+SR +L++ FDL + G A+ + AR ++G KV ++ WWD Q +T G G+ D R L++ Q + R FIN +H+ G+QVF RTV EW+ C + SNR G LL R+GY+RRRGRIK PPLN R RI FLVE A E+A AVI MDESF HQ HGS YSYF +DE GV+ DG+GRT+GKG R+IMVHA+TK GPLA D G P I G W K+T G+ ++ W A L K + + + E S + L S A +++ E+ N K V + R ++ ++ +G Q R V+ V A R L+ L ++ R +G + P F P ELFWQHGKQY+S ++++KR +++VW Q+RK YGDK+W GQ+GGWK A+C KLV HA E+NKW
Sbjct: 103 ESRMVLMLLFDLRKGGCSEKEAVLKVARTFKIGHDKVRRINNHWWDHRQLYEITAVGRGKTAKKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNMEQPSNRSAGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMVMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAKLCD-GLP----------IEEG-----WFKETGS---GKKEMEDEETAEFLWQAKL---AKGDYHAAMT-----DSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPET--NTKKHNVDLLRMFGAKSIRVRRKEGEQGVVEYNFEVPTEPGSSFPAGNREGGVSRAEVATATRE-------YIHLNHPERLEERVVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFELKRKMREVWVQIRKGWYGDKEWPGQEGGWKAADCSKLVDHAIGEMNKW 584
BLAST of mRNA_H-paniculata_contig407.10515.1 vs. uniprot
Match: A0A6H5KCN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCN2_9PHAE) HSP 1 Score: 261 bits (668), Expect = 2.890e-77 Identity = 175/490 (35.71%), Postives = 243/490 (49.59%), Query Frame = 1
Query: 91 ETARVMRVGTKKVYQVRTCWWDQKLNMTTSGEGQ-------DARAVLSKPQVAEFRSFINAKHEEGKQVFGRTVGEWIKAKCRHRISNRGVGVLLYRVGYRRRRGRIKVPPLNDGRKTRI*LFLVEFYGALTKEEAETAVIACMDESFCHQLHGSAYSYFFTDEHGVLPDGMGRTSGKGQRLIMVHAVTKEGPLAARDDTGFPRRGG-----SNLRNRIRVGKGRG*WMKKTSQRCFGRPKLP--------------QWFATLP*PIKCSWSGSKNVWR*LSKL-----LSETR*FLFSITRRTTTGMTRRSGCLRPKPRSTIQNCCANIRLE---ESLFNGKNRTVAVERRL*CAILKHQKLDGSQTRTPDVAVVLAVRR*RCLLELSFSLDFSTNLWRKLRCSWRSEG-GS*SGPLLHAVFSPTELFWQHGKQYISFDYDMKRIIKQVWEQVRKRCYGDKKWEGQDGGWKPANCVKLVAHAFEEVNKW 1455
+ A +R+GT V VRT W+D++ T+G+G+ D R V++K Q R FI +HE G+QVF RTV ++++ +SNR VG LL R+G++RRRGRIK+PPLN+ RK RI LFLV+ A E+A AVI +DESF HQ HGSAYSYF +D+ GV+ DG+GRT+GKG R+IMVHA+TK GPLA + GFP R G N +I+ G+ + + + KL QW P + +K ++ L E + +++ + R+ GC K + A E + NR V + + S TRT F +F L K R +G G P F P ELFWQHGK Y+S ++ R I VW+Q+R YGD +W+GQ+GGWK ANC KLV HA ++++W
Sbjct: 6 QVATTLRIGTDNVLAVRTLWYDKQELYETNGKGRGKATSFDDGRRVITKEQEDGLREFIKGEHEAGRQVFRRTVKDYLECSFGLEMSNRAVGGLLQRLGFKRRRGRIKIPPLNEERKNRIRLFLVKMDLAKRAEDAGVAVIVYIDESFVHQAHGSAYSYFPSDDTGVVQDGIGRTTGKGLRMIMVHAITKHGPLAELQE-GFPIREGWFKAKENRAKKIKPGEADFEMSDEQTAEFLWQAKLATGDYHNAMTDGMFMQWLKHRLTPAFDAQFKNKKMFLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTRESEGKAAEYNFEVPAQGSLPNANRKNGVSK----------EEIASVTRT------------------YFKKNFPQKLEEKAETYMREKGWGLIWTPPYMPTFQPIELFWQHGKHYVSIHFEKGRNILDVWKQIRLGWYGDPEWDGQEGGWKAANCGKLVQHAIGKMDEW 466
BLAST of mRNA_H-paniculata_contig407.10515.1 vs. uniprot
Match: A0A6H5KDX7_9PHAE (DDE_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX7_9PHAE) HSP 1 Score: 252 bits (643), Expect = 5.160e-74 Identity = 181/494 (36.64%), Postives = 237/494 (47.98%), Query Frame = 1
Query: 91 ETARVMRVGTKKVYQVRTCWWD--QKLNMTTSGEGQ-----DARAVLSKPQVAEFRSFINAKHEEGKQVFGRTVGEWIKAKCR-HRISNRGVGVLLYRVGYRRRRGRIKVPPLNDGRKTRI*LFLVEFYGALTKEEAETAVIACMDESFCHQLHGSAYSYFFTDEHGVLPDGMGRTSGKGQRLIMVHAVTKEGPLAARDDTGFPRRGGSNLRNRIRVGKGRG*WMKKTSQRCFGRPKLPQ-------WFATLP*PIKCSWSGSKNVWR*LSKLLSETR*FLFSITRRTTTGMTRRSGCLRPKPRSTIQNCCANIRLEESLFNGKNRTVAVERRL*CAILKHQKLDGSQ--------------------TRTPDVA---VVLAVRR*RCLLELSFSLDFSTNLWRKLRCSWRSEGGS*SG-PLLHAVFSPTELFWQHGKQYISFDYDMKRIIKQVWEQVRKRCYGDKKWEGQDGGWKPANCVKLVAHAFEEVNKW 1455
+ AR ++G KV ++ WWD Q T G G+ D R L++ Q + R FIN +H+ G+QVF RTV EW+ C + SNR G LL R+GY+RRRGRIK PPLN R RI FLVE A E+A AVI MDESF HQ HGS YSYF +DE GV+ DG+GRT+GKG R+IMVHA+TK GPLA D G P I G W K+T G+ ++ W A L K + + + E S + L S A +++ ES N K V + R ++ ++ +G Q R V+ V A R L+ L ++ R +G + P F P ELFWQHGKQY+S +++KR +++VW Q+RK YGDK W GQ+GGWK ANC KLV HA E+NKW
Sbjct: 10 QVARTFKIGHDKVRRINNHWWDHRQLYETTAVGRGKTAKKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNMEQPSNRSAGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAKLCD-GLP----------IEEG-----WFKETGS---GKKEMEDEETAEFLWQAKL---AKGDYHAAMT-----DSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPES--NTKKHNVDLLRMFGAKSIRVRRKEGEQGVVEYNLEVPTEPGSSFPAGNREGGVSRAEVATATRE-------YIHLNHPERLEERVVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLKFELKRKMREVWVQIRKGWYGDKAWPGQEGGWKAANCSKLVDHAIGEMNKW 467
BLAST of mRNA_H-paniculata_contig407.10515.1 vs. uniprot
Match: A0A6H5KP14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP14_9PHAE) HSP 1 Score: 251 bits (642), Expect = 1.450e-73 Identity = 172/480 (35.83%), Postives = 237/480 (49.38%), Query Frame = 1
Query: 115 GTKKVYQVRTCWWDQKLNMTTSGEGQ-------DARAVLSKPQVAEFRSFINAKHEEGKQVFGRTVGEWIKAKCRHRISNRGVGVLLYRVGYRRRRGRIKVPPLNDGRKTRI*LFLVEFYGALTKEEAETAVIACMDESFCHQLHGSAYSYFFTDEHGVLPDGMGRTSGKGQRLIMVHAVTKEGPLAARDDTGFPRRGG-----SNLRNRIRVGKGRG*WMKKTSQRCFGRPKLP--------------QWFATLP*PIKCSWSGSKNVWR*LSKL-----LSETR*FLFSITRRTTTGMTRRSGCLRPKPRSTIQNCCANIRLE---ESLFNGKNRTVAVERRL*CAILKHQKLDGSQTRTPDVAVVLAVRR*RCLLELSFSLDFSTNLWRKLRCSWRSEG-GS*SGPLLHAVFSPTELFWQHGKQYISFDYDMKRIIKQVWEQVRKRCYGDKKWEGQDGGWKPANCVKLVAHAFEEVN 1449
GT KV VRT W+D++ T+G+G+ D R V+++ Q R FI +HE G+QVF RTV ++++ +SNR VG LL R+G++RRRGRIK+PPLN+ RK RI LFLV+ A E+A AVI MDESF HQ HGSAYSYF +D+ GV+ DG+GRT+GKG R+IMVHA+TK GPLA + GFP R G N +I+ G+ + + + KL QW P + +K ++ L E + +++ + R+ GC K + A E + NR V + + S TRT F +F L K R +G G P F P ELFWQHGK Y+S ++ R + VW+Q+R YGD +W+GQ+GGWK ANC KLV HA +++
Sbjct: 58 GTDKVLAVRTLWYDKQELYETNGKGRGKATSVDDGRRVITQEQEDGLREFIKGEHEAGRQVFRRTVKDYLECSFGLEMSNRAVGGLLQRLGFKRRRGRIKIPPLNEERKNRIRLFLVKMDLAKGAEDAGVAVIVYMDESFVHQAHGSAYSYFPSDDTGVVQDGIGRTTGKGLRMIMVHAITKHGPLAELQE-GFPIREGWFKAKENRAKKIKPGEADFEMSDEQTAEFLWQAKLATGDYHNAMTDGMFMQWLKHRLTPAFDAQFKNKKMFLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTRESEGKAAEYNFEVPAQGSLPNANRKNGVSK----------EEIASVTRT------------------YFKKNFPQKLEEKAETYMREKGWGLIWTPPYMPTFQPIELFWQHGKHYVSIHFEKGRNMLDVWKQIRLGWYGDPEWDGQEGGWKAANCGKLVQHAIGKMD 508
BLAST of mRNA_H-paniculata_contig407.10515.1 vs. uniprot
Match: A0A6H5JR41_9PHAE (DDE_3 domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR41_9PHAE) HSP 1 Score: 244 bits (622), Expect = 2.990e-69 Identity = 177/494 (35.83%), Postives = 238/494 (48.18%), Query Frame = 1
Query: 91 ETARVMRVGTKKVYQVRTCWWD--QKLNMTTSGEGQ-----DARAVLSKPQVAEFRSFINAKHEEGKQVFGRTVGEWIKAKCR-HRISNRGVGVLLYRVGYRRRRGRIKVPPLNDGRKTRI*LFLVEFYGALTKEEAETAVIACMDESFCHQLHGSAYSYFFTDEHGVLPDGMGRTSGKGQRLIMVHAVTKEGPLAARDDTGFPRRGGSNLRNRIRVGKGRG*WMKKTSQRCFGRPKLPQ-------WFATLP*PIKCSWSGSKNVWR*LSKLLSETR*FLFSITRRTTTGMTRRSGCLRPKPRSTIQNCCANIRLEESLFNGKNRTVAVERRL*CAILKHQKLDGSQ--------------------TRTPDVA---VVLAVRR*RCLLELSFSLDFSTNLWRKLRCSWRSEGGS*SG-PLLHAVFSPTELFWQHGKQYISFDYDMKRIIKQVWEQVRKRCYGDKKWEGQDGGWKPANCVKLVAHAFEEVNKW 1455
+ AR ++G KV ++ WWD Q T G G+ D R L++ Q + R FIN +H+ G+QVF RTV EW+ C + SNR G LL R+GY+RRRGRIK PPLN R RI FLV A E+A AVI MDESF HQ HGS YSYF +DE GV+ DG+GRT+GKG R+IMVHA+TK GPLA D G P I G W K+T G+ ++ W A L K + + + E S + L S + +++ E+ N K V + R ++ ++ +G Q R V+ V A R L+ L ++ R +G + P F P ELFWQHGKQY+S ++++KR +++VW Q+RK YGDK+W GQ+GGWK A+C KLV HA E+NKW
Sbjct: 138 QVARTFKIGHDKVRRINNHWWDHRQLYETTAVGRGKTAKKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNMEQPSNRSAGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLV-MNMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAKLCD-GLP----------IEEG-----WFKETGS---GKKEMEDEETAEFLWQAKL---AKGDYHAAMT-----DSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFVSEVKVPET--NTKKHNVDLLRMFGAKSIRVRRKEGEQGVVEYNFEVPTEPGSSFPAGNREGGVSRAEVATATRE-------YIHLNHPERLEERVVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFELKRKMREVWVQIRKGWYGDKEWPGQEGGWKAADCSKLVDHAIGEMNKW 594
BLAST of mRNA_H-paniculata_contig407.10515.1 vs. uniprot
Match: A0A6H5KKL0_9PHAE (DDE_3 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKL0_9PHAE) HSP 1 Score: 215 bits (548), Expect = 2.970e-60 Identity = 161/484 (33.26%), Postives = 226/484 (46.69%), Query Frame = 1
Query: 31 ILLIYFDLVQSGMGANPAIKETARVMRVGTKKVYQVRTCWWD--QKLNMTTSGEGQ-----DARAVLSKPQVAEFRSFINAKHEEGKQVFGRTVGEWIKAKCR-HRISNRGVGVLLYRVGYRRRRGRIKVPPLNDGRKTRI*LFLVEFYGALTKEEAETAVIACMDESFCHQLHGSAYSYFFTDEHGVLPDGMGRTSGKGQRLIMVHAVTKEGPLAARD-----DTGFPRRGGSNLRNRIRVGKGRG*WMKKTSQRCFGRPKLPQWFAT-LP*PIKCSWSGSKNVWR*LSKLLSETR*FLFSI----------TRRTTTGMTRRSGC--LRPKPRSTIQNCCA-NIRLEE---SLFNGKNRTVAVERRL*CAILKHQKLDGSQTRTPDVAVVLAVRR*RCLLELSFSLDFSTNLWRKLRCSWRSEGGS*SGPLLHAVFSPTELFWQHGKQYISFDYDMKRIIKQVWEQVRKRCYGDKKWEGQDG 1392
+L++ FDL + G N A+ + AR ++G KV ++ WWD Q T G G+ D R L++ Q + R FIN +H+ G+QVF RTV EW+ C + SNR LL R+GY+ RRGRIK PPLN R RI FLVE A E+A AVI +D SF HQ HGS YSYF DE V+ DG+GRT+GKG R+IMVHA+TK GPLA + G+ + GS R W K ++ + F L + +++ L+ + + T++ + R G +R K + Q N + S F NR V R A + + + + VV +R+ + L W P F P ELFWQHGKQY+S ++++KR +++VW Q+RK YGDK+W GQ+G
Sbjct: 2 VLMLLFDLRKEGRAENEAVLQVARTFKIGHDKVRRINNHWWDHRQLYETTAVGRGKTAKKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNMEQPSNRSAEGLLSRLGYKGRRGRIKTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYIDGSFVHQAHGSPYSYFPADEDEVVQDGIGRTTGKGLRVIMVHAITKWGPLAKLCVGLPIEEGWFKETGSGKREMEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRMFGAKSIRVKRKEGEQGVVEENFEVPTEPGSSFPAGNREGGVSRAE-VATATREYIHLNHPERLEERVVTFMRK------------------KGLALIWT--------PPYMPSFQPIELFWQHGKQYVSVNFELKRKVREVWVQIRKGWYGDKEWPGQEG 458 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig407.10515.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig407.10515.1 >prot_H-paniculata_contig407.10515.1 ID=prot_H-paniculata_contig407.10515.1|Name=mRNA_H-paniculata_contig407.10515.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=184bp MDEKDIAEMLWQAKIATVVCHAAMTDKMFMEWLEKRLALTFKAAFGNKMIback to top mRNA from alignment at H-paniculata_contig407:35438..37605- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig407.10515.1 ID=mRNA_H-paniculata_contig407.10515.1|Name=mRNA_H-paniculata_contig407.10515.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2168bp|location=Sequence derived from alignment at H-paniculata_contig407:35438..37605- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig407:35438..37605- >mRNA_H-paniculata_contig407.10515.1 ID=mRNA_H-paniculata_contig407.10515.1|Name=mRNA_H-paniculata_contig407.10515.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1104bp|location=Sequence derived from alignment at H-paniculata_contig407:35438..37605- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |