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Homology
BLAST of mRNA_H-paniculata_contig4057.10488.1 vs. uniprot
Match: D7FUH0_ECTSI (Dihydroxy-acid dehydratase, N-termnial part n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUH0_ECTSI) HSP 1 Score: 269 bits (688), Expect = 2.140e-86 Identity = 132/155 (85.16%), Postives = 145/155 (93.55%), Query Frame = 1
Query: 379 MDASEGVED--GVVMNRFSSKLTQVKSQGASQAMLYATGITKDDMNKAQVGISSVWFEGNPCNMHLLDLAKEAKEGVIDSGMVGYRFNTIGVSDGISMGTRGMSFSLQSRDLIADSIETVMGGQWYDANIAIPGCDKNMPGCLISMGRLNRPAIM 837
MDAS G ++ GVVMNRFSS LTQ KSQGASQAMLYATG+T +DMNKAQVG+SSVWFEGNPCNMHLLDLAKEAK+GV ++GMVGYRFNTIGVSDGISMGT GMSFSLQSRD+IADSIETVMGGQWYD NI+IPGCDKNMPGCLI+MGR+NRP+IM
Sbjct: 1 MDASAGEDEEGGVVMNRFSSTLTQRKSQGASQAMLYATGLTTEDMNKAQVGVSSVWFEGNPCNMHLLDLAKEAKDGVTEAGMVGYRFNTIGVSDGISMGTSGMSFSLQSRDVIADSIETVMGGQWYDGNISIPGCDKNMPGCLIAMGRVNRPSIM 155
BLAST of mRNA_H-paniculata_contig4057.10488.1 vs. uniprot
Match: A0A6H5K3P6_9PHAE (Dihydroxy-acid dehydratase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3P6_9PHAE) HSP 1 Score: 271 bits (693), Expect = 5.660e-84 Identity = 132/155 (85.16%), Postives = 146/155 (94.19%), Query Frame = 1
Query: 379 MDASEGVED--GVVMNRFSSKLTQVKSQGASQAMLYATGITKDDMNKAQVGISSVWFEGNPCNMHLLDLAKEAKEGVIDSGMVGYRFNTIGVSDGISMGTRGMSFSLQSRDLIADSIETVMGGQWYDANIAIPGCDKNMPGCLISMGRLNRPAIM 837
MDAS G ++ GV+MNRFSS LTQ KSQGASQAMLYATG+T +DMNKAQVG+SSVWFEGNPCNMHLLDLAKEAK+GV ++GMVGYRFNTIGVSDGISMGTRGMSFSLQSRD+IADSIETVMGGQWYD NI+IPGCDKNMPGCLI+MGR+NRP+IM
Sbjct: 1 MDASAGEDEEGGVIMNRFSSTLTQRKSQGASQAMLYATGLTTEDMNKAQVGVSSVWFEGNPCNMHLLDLAKEAKDGVTEAGMVGYRFNTIGVSDGISMGTRGMSFSLQSRDVIADSIETVMGGQWYDGNISIPGCDKNMPGCLIAMGRVNRPSIM 155
BLAST of mRNA_H-paniculata_contig4057.10488.1 vs. uniprot
Match: A0A367IR15_RHIST (Uncharacterized protein (Fragment) n=1 Tax=Rhizopus stolonifer TaxID=4846 RepID=A0A367IR15_RHIST) HSP 1 Score: 242 bits (618), Expect = 1.440e-75 Identity = 113/141 (80.14%), Postives = 133/141 (94.33%), Query Frame = 1
Query: 415 MNRFSSKLTQVKSQGASQAMLYATGITKDDMNKAQVGISSVWFEGNPCNMHLLDLAKEAKEGVIDSGMVGYRFNTIGVSDGISMGTRGMSFSLQSRDLIADSIETVMGGQWYDANIAIPGCDKNMPGCLISMGRLNRPAIM 837
+N++SS +TQ KSQGASQAMLYATG+T +DMNKAQVGISSVW+EGNPCNMHLLDLA E K+ V+ +G++GYRFNT+GVSDGISMGTRGMS+SLQSRDLIADSIETVMGGQWYDANI+IPGCDKNMPG L++MGR+NRP++M
Sbjct: 36 LNKYSSIITQPKSQGASQAMLYATGLTDEDMNKAQVGISSVWYEGNPCNMHLLDLAGEIKKSVLKAGLIGYRFNTVGVSDGISMGTRGMSYSLQSRDLIADSIETVMGGQWYDANISIPGCDKNMPGVLMAMGRVNRPSMM 176
BLAST of mRNA_H-paniculata_contig4057.10488.1 vs. uniprot
Match: A0A835ZF89_9STRA (Dihydroxy-acid dehydratase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF89_9STRA) HSP 1 Score: 249 bits (636), Expect = 1.520e-75 Identity = 121/143 (84.62%), Postives = 132/143 (92.31%), Query Frame = 1
Query: 409 VVMNRFSSKLTQVKSQGASQAMLYATGITKDDMNKAQVGISSVWFEGNPCNMHLLDLAKEAKEGVIDSGMVGYRFNTIGVSDGISMGTRGMSFSLQSRDLIADSIETVMGGQWYDANIAIPGCDKNMPGCLISMGRLNRPAIM 837
VV N++SS LTQ K QGASQAMLYATG+ DM+KAQVGISSVWFEGNPCNMHLLDLA + KEGV+ +GMVGYRFNTIGVSDGISMGT GMSFSLQSRDLIADSIETVMGGQWYDAN++IPGCDKNMPGCLI+MGRLNRPA+M
Sbjct: 7 VVPNKYSSILTQNKIQGASQAMLYATGLEPSDMSKAQVGISSVWFEGNPCNMHLLDLAAKVKEGVVKAGMVGYRFNTIGVSDGISMGTDGMSFSLQSRDLIADSIETVMGGQWYDANVSIPGCDKNMPGCLIAMGRLNRPALM 149
BLAST of mRNA_H-paniculata_contig4057.10488.1 vs. uniprot
Match: A0A2E7D9T8_9PLAN (Dihydroxy-acid dehydratase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E7D9T8_9PLAN) HSP 1 Score: 249 bits (635), Expect = 1.900e-75 Identity = 118/141 (83.69%), Postives = 134/141 (95.04%), Query Frame = 1
Query: 415 MNRFSSKLTQVKSQGASQAMLYATGITKDDMNKAQVGISSVWFEGNPCNMHLLDLAKEAKEGVIDSGMVGYRFNTIGVSDGISMGTRGMSFSLQSRDLIADSIETVMGGQWYDANIAIPGCDKNMPGCLISMGRLNRPAIM 837
+N+FS K+TQ +SQGASQAMLYATG+T+DDMNKAQVGI+SVW+EGNPCNMHLLDLA + KEGV ++G+VG RFNTIGVSDGISMGTRGMSFSLQSRDLIADS+ETVMGGQWYDA IA+PGCDKNMPGCL++MGRLNRPAIM
Sbjct: 4 LNKFSKKITQPRSQGASQAMLYATGMTEDDMNKAQVGIASVWYEGNPCNMHLLDLAGQVKEGVQEAGLVGMRFNTIGVSDGISMGTRGMSFSLQSRDLIADSMETVMGGQWYDALIALPGCDKNMPGCLMAMGRLNRPAIM 144
BLAST of mRNA_H-paniculata_contig4057.10488.1 vs. uniprot
Match: A0A2G4SLP3_RHIZD (Dihydroxy-acid dehydratase n=5 Tax=Rhizopus TaxID=4842 RepID=A0A2G4SLP3_RHIZD) HSP 1 Score: 247 bits (630), Expect = 1.450e-74 Identity = 116/145 (80.00%), Postives = 136/145 (93.79%), Query Frame = 1
Query: 403 DGVVMNRFSSKLTQVKSQGASQAMLYATGITKDDMNKAQVGISSVWFEGNPCNMHLLDLAKEAKEGVIDSGMVGYRFNTIGVSDGISMGTRGMSFSLQSRDLIADSIETVMGGQWYDANIAIPGCDKNMPGCLISMGRLNRPAIM 837
D +N++SS +TQ KSQGASQAMLYATG+T++DMNKAQVGISSVW+EGNPCNMHLLDLA E K+GV ++G++GYRFNTIGVSDGISMGTRGMS+SLQSRDLIADSIETVMGGQWYDANI+IPGCDKNMPG L++MGR+NRP++M
Sbjct: 11 DNKKLNKYSSIITQPKSQGASQAMLYATGLTEEDMNKAQVGISSVWYEGNPCNMHLLDLATEVKKGVQEAGLIGYRFNTIGVSDGISMGTRGMSYSLQSRDLIADSIETVMGGQWYDANISIPGCDKNMPGVLMAMGRVNRPSLM 155
BLAST of mRNA_H-paniculata_contig4057.10488.1 vs. uniprot
Match: A0A397IKQ8_9GLOM (Dihydroxy-acid dehydratase n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397IKQ8_9GLOM) HSP 1 Score: 247 bits (631), Expect = 1.850e-74 Identity = 114/143 (79.72%), Postives = 132/143 (92.31%), Query Frame = 1
Query: 409 VVMNRFSSKLTQVKSQGASQAMLYATGITKDDMNKAQVGISSVWFEGNPCNMHLLDLAKEAKEGVIDSGMVGYRFNTIGVSDGISMGTRGMSFSLQSRDLIADSIETVMGGQWYDANIAIPGCDKNMPGCLISMGRLNRPAIM 837
V +N++S +TQ KSQGASQAMLY TG+ +DMNKAQ+GISSVW+EGNPCNMHLLDLA + KEGVI +GM+GYRFNT+GVSDGISMGTRGM +SLQSRDLIADSIETVMGGQWYDANI++PGCDKNMPGCLI+MGRLNRP++M
Sbjct: 40 VEINKYSKHITQPKSQGASQAMLYGTGLKSEDMNKAQIGISSVWYEGNPCNMHLLDLASKVKEGVIKAGMIGYRFNTVGVSDGISMGTRGMCYSLQSRDLIADSIETVMGGQWYDANISLPGCDKNMPGCLIAMGRLNRPSLM 182
BLAST of mRNA_H-paniculata_contig4057.10488.1 vs. uniprot
Match: A0A225UEP5_9STRA (Dihydroxy-acid dehydratase (Fragment) n=2 Tax=Phytophthora TaxID=4783 RepID=A0A225UEP5_9STRA) HSP 1 Score: 236 bits (602), Expect = 2.310e-74 Identity = 114/152 (75.00%), Postives = 137/152 (90.13%), Query Frame = 1
Query: 382 DASEGVEDGVVMNRFSSKLTQVKSQGASQAMLYATGITKDDMNKAQVGISSVWFEGNPCNMHLLDLAKEAKEGVIDSGMVGYRFNTIGVSDGISMGTRGMSFSLQSRDLIADSIETVMGGQWYDANIAIPGCDKNMPGCLISMGRLNRPAIM 837
DA + V DGV +NR+S+ +TQ K++GASQAMLYATG+T+DDM+K QVGI+S+W+EGNPCNMHLLDLA E K+GV +G+VG RFNTIGVSDGISMGT GMS+SLQSRDLIADSIETVMGGQWYDANI IPGCDKNMPGC+++M R+NRP++M
Sbjct: 30 DAPKAV-DGVRINRYSANVTQPKARGASQAMLYATGMTEDDMDKPQVGIASMWWEGNPCNMHLLDLAGEVKKGVNAAGLVGLRFNTIGVSDGISMGTDGMSYSLQSRDLIADSIETVMGGQWYDANICIPGCDKNMPGCVMAMARVNRPSLM 180
BLAST of mRNA_H-paniculata_contig4057.10488.1 vs. uniprot
Match: A0A8H7QNT4_9FUNG (Dihydroxy-acid dehydratase n=2 Tax=Mucoraceae TaxID=34489 RepID=A0A8H7QNT4_9FUNG) HSP 1 Score: 247 bits (630), Expect = 2.490e-74 Identity = 116/141 (82.27%), Postives = 134/141 (95.04%), Query Frame = 1
Query: 415 MNRFSSKLTQVKSQGASQAMLYATGITKDDMNKAQVGISSVWFEGNPCNMHLLDLAKEAKEGVIDSGMVGYRFNTIGVSDGISMGTRGMSFSLQSRDLIADSIETVMGGQWYDANIAIPGCDKNMPGCLISMGRLNRPAIM 837
+N++SS +TQ KSQGASQAMLYATG+T +DMNKAQVGISSVW+EGNPCNMHLLDLA E K+GV D+G++GYRFNTIGVSDGISMGTRGMS+SLQSRDLIADSIETVMGGQWYDANI+IPGCDKNMPG L++MGR+NRP++M
Sbjct: 39 LNKYSSVITQPKSQGASQAMLYATGLTDEDMNKAQVGISSVWYEGNPCNMHLLDLAGEVKKGVRDAGLIGYRFNTIGVSDGISMGTRGMSYSLQSRDLIADSIETVMGGQWYDANISIPGCDKNMPGVLMAMGRVNRPSLM 179
BLAST of mRNA_H-paniculata_contig4057.10488.1 vs. uniprot
Match: A0A162NBE3_PHYB8 (Dihydroxy-acid dehydratase n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A162NBE3_PHYB8) HSP 1 Score: 246 bits (629), Expect = 3.270e-74 Identity = 113/141 (80.14%), Postives = 133/141 (94.33%), Query Frame = 1
Query: 415 MNRFSSKLTQVKSQGASQAMLYATGITKDDMNKAQVGISSVWFEGNPCNMHLLDLAKEAKEGVIDSGMVGYRFNTIGVSDGISMGTRGMSFSLQSRDLIADSIETVMGGQWYDANIAIPGCDKNMPGCLISMGRLNRPAIM 837
+N++S+ +TQ KSQGASQAMLYATG+T +DMNKAQVGISS+W+EGNPCNMHL+DLA K+GV D+G++GYRFNTIGVSDGISMGTRGMS+SLQSRDLIADSIETVMGGQWYDANI+IPGCDKNMPGCL++MGR NRP++M
Sbjct: 36 LNKYSATITQPKSQGASQAMLYATGLTDEDMNKAQVGISSIWYEGNPCNMHLMDLAGHVKKGVQDAGLIGYRFNTIGVSDGISMGTRGMSYSLQSRDLIADSIETVMGGQWYDANISIPGCDKNMPGCLMAMGRFNRPSLM 176
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 270.4 |
| Seed ortholog evalue | 7.6e-70 |
| Seed eggNOG ortholog | 2880.D7FUH0 |
| KEGG rclass | RC00468,RC01714 |
| KEGG ko | ko:K01687 |
| KEGG Reaction | R01209,R04441,R05070 |
| KEGG Pathway | ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230 |
| KEGG Module | M00019,M00570 |
| Hectar predicted targeting category | chloroplast |
| GOs | GO:0003674,GO:0003824,GO:0004160,GO:0005488,GO:0005507,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006807,GO:0006950,GO:0006970,GO:0007275,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009507,GO:0009532,GO:0009536,GO:0009553,GO:0009555,GO:0009570,GO:0009628,GO:0009651,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0019752,GO:0022622,GO:0032501,GO:0032502,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0046872,GO:0046914,GO:0048229,GO:0048364,GO:0048731,GO:0048856,GO:0050896,GO:0071704,GO:0099402,GO:1901564,GO:1901566,GO:1901576 |
| EggNOG free text desc. | dihydroxy-acid dehydratase activity |
| EggNOG OGs | COG0129@1,KOG2448@2759 |
| EC | 4.2.1.9 |
| COG Functional cat. | EG |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00002,ko01000 |
| Exons | 6 |
| Model size | 838 |
| Cds size | 678 |
| Stop | 0 |
| Start | 1 |
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4057.10488.1 >prot_H-paniculata_contig4057.10488.1 ID=prot_H-paniculata_contig4057.10488.1|Name=mRNA_H-paniculata_contig4057.10488.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=226bp
MILHTASCIKPLSCLSMVAPVTTVATAILAMASRTMAFVAPSSTMLSSLG LSAGKGLRRSWYSSCSSPMSAMSMDASEGVEDGVVMNRFSSKLTQVKSQG ASQAMLYATGITKDDMNKAQVGISSVWFEGNPCNMHLLDLAKEAKEGVID SGMVGYRFNTIGVSDGISMGTRGMSFSLQSRDLIADSIETVMGGQWYDAN IAIPGCDKNMPGCLISMGRLNRPAIM back to topmRNA from alignment at H-paniculata_contig4057:174..10874- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig4057.10488.1 ID=mRNA_H-paniculata_contig4057.10488.1|Name=mRNA_H-paniculata_contig4057.10488.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10701bp|location=Sequence derived from alignment at H-paniculata_contig4057:174..10874- (Halopteris paniculata Hal_grac_a_UBK monoicous) CAGGTACGTATTCTAAAAAATGTTTTTTCCATGGGTTCAATTTCGTACTC
GAAGCATATTTAACCACTACACCAACTAGCATCAATTGACGGTTTGCAGG
AGACAGCCAAAACTGTACGGCTGGGCTAGCGAGCCTGTGGTGGGAGTACA
GCCGGACGCATGATACTGCATACAGCTTCTTGCATCAAGCCATTATCTTG
TTTGTAAGTATTAATAGAATGCCTCAAACGGCAGCTTCTCGCACATATCT
ACTGTAGCTCGAGATTCCAAGTATGGGGGAAATTGGTGCTCTAGAACGGC
CGCTGTTATTTACATGATAAGAACAAACAGTATATCGTCGACTGTGGGCC
TTGATTGATGTATGGCGGAAGCACTTGGTTCACCACGTAAGCTGAACAGG
ATGCACAGATAAGCGTGAAACCTTCTCATGACCAGTGTCGCCATGTTTGT
GCGCCTGCATTCGTCATGATGTATGTCTGCCGGTATGTTGTACCACCTCT
AAACATGCACCATATGTGTCAAGACCATAGTTTTTCATGTGAAAACAGTA
ACCAGTACAAACCGTTGGTGTGTATCACCAGCAATGAAACGCCGAAGTCC
TGTCTGATATGACCGAGGTACTTCACTCTAATGAAAGAAAAGACGCATGC
TCCTTGGTCAAGTTGCTCGGGGCAATCCCTGAAGTCAGCGCTATGCCTTG
TTTTTGGCTTCGCTGGTCAGTACTCACAACATTCGTATGCGCATCACCTC
TAAAGAACCGCATGTGCGACTCGTGCTTCCACCTCTGTATAGCTGTAGCT
TACTTCGCCGTCCATATTTTCGTATTTTCTTCAACAGTTACGGACCATTT
ATATATTTGACACATGTTGTCTGTTCTGATTGTACCTGTTGTGCTGTACA
GCGTAGGCGTGCAATCTTTTTTGTTCGGGGGGGGGGGGGGTTGATTTCTT
GTTTATCTGTCGCAGAAGTGTCACATCAGTATCTGTTGTTTTGTGCAGCG
TAGGCGTGCAGTTTTTTGGGGGGGTGGAGGTCTTGTTTCTCTGTAGCAGA
AGTGTCGCATCAGTATCTGTTGTATGGTGCAGCGTAGGCGTGCAGTTTTG
GGGGGGGGTGGAGGTCTTGTTTCCTTGTTTATCTGTAGGAGAAGTTGTTT
GTGGCGTTGTACGAGATACCGTTCGAGATATCAATAGTCACTTGCGTATT
TTGTAACCTATTATACCGATGTAGTAGAGCCATGGATAGGCACGTGAGTT
CATGCTCTGTCCTCGGTGCATGCACAACTGCTCTCTGCATCCGCGAAGAA
CGCAATTGGTGTGTATGCACGACGTCCGTCAAGGACTCGCTGTTTTAATT
TACTTGAGCCGAGGATTAAGTATTATACGAACTACATGTCAGCACCAAAA
ACATACGAATGATAAAAATATCTCGCTGGCGTAGCACTGGGGGTGTGTCC
TGTCGGACCAAAGAGAAGTATCCTCCAATACCACTTACAATTGATTGGGT
AATGCCACCCCCTAAAAATGGGGTCAAAAAACGATTTTGAAATGTTTTTC
GAGAAATCTTTTCGATTTTTCAAAAACGATTCTATTTCCAGAATACAATT
TCACGGCCCAAGAGGAACATAAATAACGACCAGGTTGGGAACTGTACAAA
CTTGGTAAATAAACTTCCGCGCTGCCAGGCGTGACCAGACAGCTTCACTG
CCCGATCCAGTACAGCCAACCGTAGCTCGAACCGTAGCTCTTGATCAACT
GAGCAACGTGTATGTGGTTTGGGTTGAATTCGTTCAACACTCAAGGAGAA
CCGACGTTTTCAGGCGCTCGTGGCAAGCCAGACGGACAGAAAAAATGTCA
AACAGCGCACGTTTTGTCCTGTCAAATTTACATGGATCGTTGCAGCTCCT
GAAATACTTGATGGAAGTCGTACTACCGGATACGAACGGAGTGCCACCGA
GAAAAAATTACTTTCGAAGTATCGCTATCAAAATACACTGCGCGAGAACA
TCAACGATACCGACGTCACATCCCGTGGTATGGGGTATGTGATACGGATG
CGGCGAAAAAAATCATATAGCGTTTACCGTACCGTCAGAGTATGGTGAAG
AGTGTTCATGATCGTAGGCCTGAGACGTCTAGATTCGCCAAAGAAGTGGC
CGTGGGTCTGAGTTAATCAGGGTTGATGTTTTAGTGTACCGTACAACCAT
TGTGTCATGATTCACTGACCAGCTCGCTCAGTGGTGGTCGCCTGACACCC
GCCTACGGCATAGCTGTAGGACAAGCACGGCAGCTGCTGGCGACGGCAAC
TGGAACACTGCTAGCTCTGCAAAGGCTGTGGCTTCACGAATTGGTGGTCG
TGCAGGCTCTGTAGCCAACACTGCTGGCCCGCGAGCTACTGCCGATGTTA
CCGCCAGCCCCGCCTGGGAAACAGCGATTCTAATTGGCTCAAAATTTGCC
ATGCATTAATTCTTCATTTAATGTCGTAATTTATTCTAAGGGAAGTTCAG
CGTGTTGTTCACTGTAGTGCAGTTTGCCCTGGGCAAGGTTTTCCAGCACT
CATGAACAATGTCATTTTCTTTTTTTTCTTCTAATTCCGCTCGAGAACCA
TGCACATGACGTCATAGATATGCGCCATATTCTGACCATGCCGGGTGCGA
GGCGGTGATTGTAGTCAACAGTGTTTTCTGGCACCTTGCCTCCAAACTGC
GAGGTTTATATGAGCTAGGTCAAGAAAGCAAACCAAAAAATTGTCTTGCC
ATCGTTTTCTCGAGGCGGAAGAGTCGTATCGCCGAGACGAATCGATCGGC
GCCGAATCTGGTGGAATCCGACAAAATGAGGCTGTGAAGAACACGACTCA
TCGCTTTTCACTGTTGTGGTCAGTGTTTTTTTGCACGACAGACGACAGGT
GAGTAGATTTATCCACAGAAACAGCAGCGGGTCCTACCTGCTACTTGAGT
ACACTTGACTGTTTCTGTGATCCGACCATGGTCATAGAGAAGAACTCAAG
GACCAGGCCCACCATTTGACACCTACATGAAAAATATATATTTAGAAAAC
CCAAACTCGGGAATAGCTTCCTACGTACTTGCCTACTCCTAACAGACTCA
AAGGCCCTCTCTACTCGCCTTTCGCCACAGTTTGCAAAGGAGTGCTGTAA
GCCAGAGCTGCATTCTAAGTCCTTGGGGGAGACTAAAACCTTTGAGGAAA
ACAGGGGGAAGAGAGAAGCGGTTGGTTGGGGTATGTGGGGAAAGCGTAGG
CAAGGCGCTCGTCAATTTCGCTCGTTTACTACCACAGCCCCTCCGTCCTC
GAAGCTACCTGTCTCCTTCCATTTACATGCATGTATCCTTATCCTGCGGC
TCTATTTCTCGTATTGCGTCGAGTCTTCGGTTTCCCTGCTCTCCGACAGG
TCGTGCCTCGTAGATAGGTCCCAGCTTGTCCAGGATCAGGCCAGCAAGTT
ATGTGGGGACCGTACCCACTAAACCGTAAACGTGTATCCTAGTTTGCCCA
TTGCACGGACTTCCCTGGACATTCGGCCTTTTTTTCCGCGCAGCTGGTAT
CTTCTGTCGTTGTCTTTTTTTCTGATTTTTCGACCGTTACACCACAATGA
AAATATCTGCCAAATACGATATTAGGGTAACTCTTCGACAGACCTTGGAT
GATTATATCATATTCTATGGTGTTTCTAAGGTGGCCACTACACAAATGGC
CTTTTACTTTGGGATTCTTGACCTGAAAGTTTGCGGAGAAGAGCGTATGT
TATTCTTGAATTTTTTTCTTTCGCTTATTCGTTGGGGAGATCGTAGGTGC
GGGTCTTTGTGGATGGTATTTGACCTGAAAACTTGAGGAAATGTCACCTA
AAAACCGAAACAAGAGAAGGAAGTAGAAAACAGAAGCGTGGATGCCTTGG
TTGTAACGATGTGCTCATCTCCGCGAAATTTCAGGTAAAGGCTCTATCAA
AAACCTCAAGTGCGCATGACCGAGGGATTGTTTTCGCCGGCCTGTTTTAA
CTGGGGCCTAAGCCTGTTGGAGCCGTTACGAATGTTGGTGTTGTTTGTTT
CCCCTAATTTCCCTCACCTCTTTTACCTCGTCTTTCCCTATTGTCCTTTT
TTTCTTTAACCAATCGGAATTTTGGAAAATGACCGATTGTAATTATTTGC
GTACAATATTTCTGAACCCCTTTTTTTTTCAGGTGTACACTTATTTCGGC
GTCATGCCGGATATAGAGGGTATTACCAGGAAAACAAGATAAAAAATGAG
ACAAAAAAAGGACAAGGGGGAAGGCCCGTATGCTAAAGTATTTTCCTGGT
AATTCGCTAACCCGGACCAATCAGCGATCACAATGGTTACTGAAATATTC
CACCGGGCCAATCAACTAGTTACCACGGTGGATGCTGACTTGTTCATGAC
AACCTGCCGCTTGGCCATGGCCAGGTGTGCCGAACGGATTCAACCTCCGG
ACAGGTGCAGAACCTTGATTGTTTACATATATATATATATCAAAGTTACT
GATGACCCTAGGATATGCCTTCCCCGCCTTGCTCCCTTTCTGCAGGAGTA
TGGTTGCGCCTGTGACTACCGTGGCGACAGCCATCCTAGCAATGGCGTCG
AGAACGATGGCCTTCGTGGCACCCTCGAGCACTATGTTGTCATCGCTCGG
ACTCTCCGCGGGAAAGGGCTTGCGTCGATCATGGTATTCTTCATGCTCCT
CCCCGATGTCTGCAATGTCGATGGACGCCTCCGAAGGTGTGCGTGTGTGT
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGATCGG
ACAGCACTAGTTCATTCCTGTGTGGATTTCTCTTCCTCGATGTTCTTTGT
GTAGGCTTTTTTTGGTGGAGTTATTTCGCATGAGAAAAAATAGGGTGCGC
ATATTTTGCACGAATATTGCAGGGGTATTTTGTATGCAGTAGTCATATGG
AGGACGGAGCTTTATTCATATCAGACTGATTTCCGATAATCGATGGCCTT
CTCATCTGTGGCTAAATGTGCCTCAAAAGTATTTCACCTATCTCATCTAT
CCACCACAACTCTTGCTTTTTGAGACTAATTCTTCTGCTATAAAGTAGTG
TCTCATAGAACAGCTACGGTAATGTTATCCAGGAGGGCGGGGGGGGGGAT
GCTGCGCCCTGTGAATTAAACTACATGTATATGTATCAATTAGTTCCATT
GGATGATGACACTTCTCTCTTTTTTATTTCTCTGCTTGCGTCACTTTGAA
ATGGGCAGGGGTGGAGGATGGGGTTGTGATGAACCGATTCTCTTCGAAGC
TGACTCAAGTGAAGTCGCAGGGAGCATCCCAGGCTATGCTGTACGCCACT
GGCATCACCAAGGACGACATGAACAAAGCCCAGGTGCCTACCGTGTCAGC
GGGATGATGCCATTTCGTCAAGAGCGATCACGAGAAGTTGTGATGTTTTG
CGTCAAGATTTGGCGGTCAAGCAAATCACCTCTCATAAAGGTCTTTCGCG
CGACGCTACAGATATGCTCTACGGTAGAGTATAACGTTACTTGTCTTGGA
ACAGGTCAGCTACTGCATGCGTTTTTATACCTCAACTACTGAAGTAAAAC
ATTCATCGCTACCCTCATGTAGGCAACAACACTGCTCGCTCTGCCCGCCG
CCGGTCGTTTCCCTCCCATGAAAAATTCGTTTTTCGGGAGTTATTTCACT
GCAGACTGGAAGAATTGTTCTGGATCTACGACGACCACGGCTATCCCATG
ATTGCCGTATTAAATGAGGATACTCGAGCATGAGACGTCGACTCCCTAGC
GCAGCTTTTCTGAAATGTTTACACGAGGAAATATCGTGTATATTGACCAA
GTGAAGTAGCGTTGTCGTTCCACCATATTATACTAAGAGCATAGTAATAG
ATAATGACGACATCCTGCACTTGTGGTGGAACAATACCAGAATTCCGTAA
AAGGGTCCTGTTTTCGGCCAAGTATTTTTTTCACGGCGCGTGTTTTGGTG
TTGAAAGTCAACTAATTGATCCAAAAATTGGGTTTCGACCCCAAAAACTT
GTAAAATGTCAGTGTGAAACATCTCCCAGTGATGTTGAAGTGCCTCTATA
ACCATAACTGGGTATAACGAGACAAAGGAAGAGTTTATACATCCGATAAT
ATCGGTGTTCGCCGTTACCGGCTATAATTACGATTTATCGGTCATCATAG
ATGGGCTATATGTTTCAACGGTAAACGTGGTAACCGCGGGTCTTGTTCGT
TTGTTTCTGCGGGGACGCGGTTCTGTGCCTCCTGCCCGCTACGTTCGCCT
GGTGATGTTCAAAGCAGTCGAGATTTGACCGCCGATATCAATGCATAGCT
TCGAAACATGAATATTTCATGAAATCCCATCGGCCGATGTGTCATATTTC
GCATGTTTCTACTGATAAACGAGCCTAGGAAAAGCTCTAACGGGCAAAAA
ATGAGCTCCTTTTGCAATTTGAGGTATGCTAAATAATGACCAGATAACGG
TCCAGAGGTGATCGAGCATTTTGTTGAGATTGCTGATGAATGAATGCTCT
ATGTTATTTGGCCATTCCCAGGTTCGCTTTCTAAAGGCTTGACAAGCGTA
GCCGATCCGTGATAATTTCTAACAGGTTTTTGGTTGCTACATCCCATTAA
AATATTTTGCACCGTCGACGAAATATATTCGTTGCCCGAACAAAATCATG
CATACGTAGTACACGTTGCAATATCTACAAAGGTGTATATATGTTATTTC
CGAAGACACTAATTATCCCGATTGTTTTCATTATCAGTGTGTGTTTTCCG
GAAAATGTGGCTGTCTCAACGTGTTGTAATTAAATTACACATTTATCTCA
GTATGCAACCAGCCTAAGGCATGTTCGTCGTACTTAACAATGGTTATTGT
CCGCTTGCGTTTCCTCGTTATTTTGGCTGTCGGAAGGTCGGCATCTCCAG
CGTCTGGTTCGAAGGCAACCCTTGCAACATGCATCTGCTAGATCTCGCCA
AAGAGGTGCGTGCGTGTACCGTTACATTACGTTACGTTATGTTACGTTAC
GCGACTTGATGGTTGTTGATTTTCTGCAGATACAAAACACAAAGTCGTGT
GATTGGTATCTCGTGGGGATAAATTGGCGCAGCACTACGGCGAGTTTTTT
TTTTCTTCTTGTTTTACATGGATGGCACTCGGGATAGTTGGCAGTAGGCG
ATGGACACCAAGTCAAGATCGAGGTCAGCGTAGGTTAGGTTGACACAGAA
CACACGAAGCATTAATATGTTGTATTATTCAGCATAAAGGATGAGCGTCA
CTTGCTACAGTCAGCGATTGATTGACTGTAGACACGAAGCTGAATGCTCC
TTGAATCAATGGCACGGCGTAGGGTAGCTGTGTGCATTAGGCAATATTGT
CAGTAGCACCGGCCTCTGGGTGGTGATAGCGGGACCAACACTTACGAAAA
GCACCCGGCATTATGGGGTCGATCGGACATCATGGCATGCAAAAATGCTT
GAGTCAAAACATAGAGGAGAGGCTCAGAAAATGCCGCCATGTGCAAAGGA
AGGTACTCGGCCTGTGAGTACAAAACATATTTACATATGCAAATCATACG
TTACCACTAACCAAGATTGATATCATACAACATATACCCGTTGAGTCGTT
CAACGATATGGTGGGTGAAAACGGGTGAAATGTCGGGATGTGTTTTGCAA
AACGAATAAGGTATGGTTTTGCACAACGAAAAGGTATTACTGGTATGTCT
ACAACTCCCTTATCTTTCGACCCTCCTCTACCATTGAACAACCCCATTAT
TGCGTTGATGAACCATCTGCGCAGTGTGCCCGCTTTCAACGGAAAATGTC
ACTATGCCCCTAGTCTTGATTTTGTTCATTTTTAGTGCTGATATGAACAT
TTATGAGGTCATTACCCAGCTGTCTATCCCTCGCTCCACCTTCTCCTTGG
GGTGATGGATTGCGCGTGGGGAGCATCTTGCCATGCCTACCGGTTACACT
TAAACGAAGAAATATTTGCATGTCTGTACAGTACCGTTGGACACTTTCTT
GGGCGCTATCCGTTGCATGGATGGACCGATCCATACACGCTACAACAGCG
CGCCCTATCTACTCGTTGTTGTGCCGTTTTTTCCTTCTGAGGATTGTTGT
TGTTGAGCGCGTTGCGTCACAAAACTGTAGCCCAGATTTTCACCCACAAA
TTAAGTTGGAAACGAAAGCAGGACACCATTCCCGTTAAACGTGTGATGAG
TTGGATCAGAATTTCAAGATAACCTTGAAGCACAGTTCAACGAACCGGTT
TTACACTTTTTCGGGCTCACTCGAAGTTCGTACTCACCTAGGCGTAGTTG
GTGTGTAGCGCGGTTTTCCCCCTGTTTGTTGTGGCATTACGCAAGGATCC
CACAAGTTGATGTATCGTCACTCCCATATAGCCCACCCTCCGTTGGCCTT
TGAAGCGCCTTTAAAAACGGGAAAAAAAAAAAAAAGGCATCCTTACACTA
CGGTGGGCTATGGCAAGGATCGTTTGTAAAGTCTGTTTCAAGTCTCAATT
CAAGTAAGTTGAAGAATACGGAATGTTGAATAAGATTTTTTTGCAACTGT
AGATAGCCCAAAATCTGACAACAAATGTCAGAGACGTGATGCCAACTGTT
GTACCTATCTGTGGTTTTCGTAATGTTTGTCTGGATGGTACAAGTGCGGT
GCCTACCCATTCTTGTATTACCAAATAACTGTCATTTTCCGTTGTCCCCA
TCTTGTTCAGGTAGCAGTTAGATTCGGATGGCTGGTGCCTTATCTGGGGA
TAACGCAAATTGAAACGTTGAAATGCCTCATGCTGGTAATGACTCTTGAG
CGATGTAGCAACGTTGGCGATATCTTATCGTGTTGATTGCCGCTCTTTTT
GTTTCTCTCTGGTTGAGGAATAAACGCGTTCGATGGCGAATCTACCGACA
GTATAGTTCATTTCTGTCGCCCGTAACTAAATCTGATGTACTTAGTGATT
ATGGAGTTTTTGCTATAGCGAAGTACTGTTGGGACCTCCTTGGATACCGT
CTTACTCTACTGGGAGACTATCTACTGTTTGTATTACAGGCGGCGTCTCG
GCTGTTTTTTGTAGGTCCATTTGTTAGTGTTTTGTTGTTCGCCAATATGT
GTTTGGATAATAGGGAATGCTATCAATAGTGCAAGTTCAGTGACGAAACT
ACTATATCCGACGAAGCTATGACCTTATATCGTGTCTTGATGAAAATAAA
AAATAGCACTTGTGGTTGATTATAGCTTACGCGACCGTACCGCTGGCGAT
TTGTTATATACTTGTACTTGACAGGCGAAAGAAGGCGTGATTGACTCTGG
AATGGTGGGCTACCGATTTAACACAATCGGTGTGTCAGATGGCATCTCCA
TGGGCACTAGAGGTACAACATCTACATGCTCGTTACTCGCAGCAGAGCCA
CGACTAGGCTAGTTTGTGGAGGTCATGCTCTAGTATTTTTTCTCGAAGGC
GCTAAAACCAATGGATGGTGATGACATGTTTCCCCCCTTGAGCGTTATAC
TCGATTATAGTATAGAATTTCGTGATGATGGTGTTTGTAATTATTGTGTC
TGGCAAGAAATTAAGCTAAACCTATTTGTTAGTTCTCCTGCGAGGACGGG
CATCGCCGAAAATCGCGCCCGTTGCTGATCGGTAACTTGACAATTTGAGA
TGCAAGAAGGTGATTACGTTGGCGATGACCGCGGTTTCAGCGCTTAGTGA
TTAGCCAGATCTTGTGTCTTCCTATTGTAGTCCTGTCTATCGATTTCAAT
ACATATCTATGTATTGAATTTTGCTTCAATGTACTCTGGTGGAAAATAGC
GACAAATTACATTGACTATATTCCCCCACATGCTGTAGTCATTATCCAAT
GAAATGTGTACAACAGACTGTAGTGCAAACAACAGGTAGTCGGCAAGAGC
GCGACAGCGGATGCTGAAAATCACAAGCATGAGCTTGCCAACCTTGGACC
CGCTAAGCGCTGACTTGCTCCCTACGCTTACACCAATACCTCTGGCACCA
ATGTATTGATGCATCGGCGATCCTCATAATATCAACATATAAGCAACGCC
GATAGCGTGTTCGCCAAAATAGATGATCTATTTGTAAAATTTGATGTGGT
CCGGTATGGCTAACAGTGGGCTAGCTCCACGTCCCAAACCCCAGTCTACC
TGCACCAACTTGGCGGTGCAAAATGAATTCCTTCTCAAAATTCGGAATTT
TTGCATGCAATATGATCGTGTGGGTGGGCTGGGGTTCAGGGCCTTCAGTT
CACTACGAGCTATACAGTATCAAATCGAAATAAAAAAAACGGAGATTTGT
TTTTGGTAAAACACCATAGTCTTATGTATTTCTACGAGATGTTGAGTAAT
AATCCATACATTGCACTGCTTTATTGTCATGCTCCACACCGCCTACCCTA
ACCAGTCTCTCATCATACCTGTACCTAGCCCTATTGCCATCCTCAATGTG
TTGTGTCCTGTGATGCTTCCCACTCTCTGTTTGAACACAGGTATGTCGTT
CTCGCTGCAGTCACGAGACTTGATCGCAGACTCGATCGAGACGGTGATGG
GGGGGCAATGGTACGACGCGAACATCGCCATCCCGGGGTGTGACAAGAAC
ATGCCGGGCTGCCTCATCTCCATGGGTAGGCTTAACCGCCCGGCTATCAT
G back to topCoding sequence (CDS) from alignment at H-paniculata_contig4057:174..10874- >mRNA_H-paniculata_contig4057.10488.1 ID=mRNA_H-paniculata_contig4057.10488.1|Name=mRNA_H-paniculata_contig4057.10488.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1356bp|location=Sequence derived from alignment at H-paniculata_contig4057:174..10874- (Halopteris paniculata Hal_grac_a_UBK monoicous) ATGATACTGCATACAGCTTCTTGCATCAAGCCATTATCTTGTTTATGATA CTGCATACAGCTTCTTGCATCAAGCCATTATCTTGTTTGAGTATGGTTGC GCCTGTGACTACCGTGGCGACAGCCATCCTAGCAATGGCGTCGAGAACGA TGGCCTTCGTGGCACCCTCGAGCACTATGTTGTCATCGCTCGGACTCTCC GCGGGAAAGGGCTTGCGTCGATCATGGTATTCTTCATGCTCCTCCCCGAT GTCTGCAATGTCGATGGACGCCTCCGAAGGAGTATGGTTGCGCCTGTGAC TACCGTGGCGACAGCCATCCTAGCAATGGCGTCGAGAACGATGGCCTTCG TGGCACCCTCGAGCACTATGTTGTCATCGCTCGGACTCTCCGCGGGAAAG GGCTTGCGTCGATCATGGTATTCTTCATGCTCCTCCCCGATGTCTGCAAT GTCGATGGACGCCTCCGAAGGGGTGGAGGATGGGGTTGTGATGAACCGAT TCTCTTCGAAGCTGACTCAAGTGAAGTCGCAGGGAGCATCCCAGGCTATG CTGTACGCCACTGGCATCACCAAGGACGACATGAACAAAGCCCAGGGGTG GAGGATGGGGTTGTGATGAACCGATTCTCTTCGAAGCTGACTCAAGTGAA GTCGCAGGGAGCATCCCAGGCTATGCTGTACGCCACTGGCATCACCAAGG ACGACATGAACAAAGCCCAGGTCGGCATCTCCAGCGTCTGGTTCGAAGGC AACCCTTGCAACATGCATCTGCTAGATCTCGCCAAAGAGGTCGGCATCTC CAGCGTCTGGTTCGAAGGCAACCCTTGCAACATGCATCTGCTAGATCTCG CCAAAGAGGCGAAAGAAGGCGTGATTGACTCTGGAATGGTGGGCTACCGA TTTAACACAATCGGTGTGTCAGATGGCATCTCCATGGGCACTAGAGGCGA AAGAAGGCGTGATTGACTCTGGAATGGTGGGCTACCGATTTAACACAATC GGTGTGTCAGATGGCATCTCCATGGGCACTAGAGGTATGTCGTTCTCGCT GCAGTCACGAGACTTGATCGCAGACTCGATCGAGACGGTGATGGGGGGGC AATGGTACGACGCGAACATCGCCATCCCGGGGTGTGACAAGAACATGCCG GGCTGCCTCATCTCCATGGGTAGGCTTAACCGCCCGGCTATCATGGTATG TCGTTCTCGCTGCAGTCACGAGACTTGATCGCAGACTCGATCGAGACGGT GATGGGGGGGCAATGGTACGACGCGAACATCGCCATCCCGGGGTGTGACA AGAACATGCCGGGCTGCCTCATCTCCATGGGTAGGCTTAACCGCCCGGCT ATCATG back to top
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