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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | signal anchor |
| Exons | 5 |
| Model size | 704 |
| Cds size | 675 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4042.10459.1 >prot_H-paniculata_contig4042.10459.1 ID=prot_H-paniculata_contig4042.10459.1|Name=mRNA_H-paniculata_contig4042.10459.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=225bp
MADVPDDDTPGGGSDAWYASNLFATGGVAAAVVVVLGLLIMMCCSWRHKR
SKSSVGSIRRRSSNAGSRDMQGGGSGSILYLGSDSGSSSEFFYNNAVNSN
RFNGGGGAGITDIPEDQTVGMSSSSTLTKSKSFRKKQELLNPSRSSSVSL
LQAGTLSTGTDSNDTHRTFSPPVSDKDGHGPYVEFTTNKDEIRGPELLAD
GLELNPMQPVSVPTAATDTAVEPDR back to topmRNA from alignment at H-paniculata_contig4042:826..5412- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig4042.10459.1 ID=mRNA_H-paniculata_contig4042.10459.1|Name=mRNA_H-paniculata_contig4042.10459.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4587bp|location=Sequence derived from alignment at H-paniculata_contig4042:826..5412- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGACGCTGAGGCTTTGGCAACTATCGTGATGGCCGATGTCCCCGGTGAGT
TGTCGTATGTCATACGTGATGTTCCAGGGTGTATGTTATACTACACATGC
CCGATAAGTCAAGCTCTTCCCGCAGGAATCATGTCTCATGCTAGCTGTTT
TCCCTCTCAAGTGTGTTTAAGACACTGCGTGAAAAGTGATGATCGAATCC
ACAGCCCATGGATTGAGATGGGATCGATTCGGGGTGTTGGATCCATTCCA
CAGACGACGGGGTGCGCAGTACGAACGTTTTTACTGGTCCGTGGCCTACG
GGTCACTTATTGATCGACTATATTCCAACGACCCCTGGGGCATGGATCAC
TAGTGCCTAAACATGTACGAATCGCTTGTGAACAAACATGCATGGGTACG
GTGTACAAATAGTATGATCTATCCGTGCAAATGACGGGTATGACCTATGC
ACATGAGCGGCAATCCTCAAGCCCCAGAAAGTACGAGGTCGTCTGCTGAG
TGAGTGTTGCCCTTGAAACGGACGATCGGCAATCCTGAAGCCTCAGAGAG
AACGAAATCGTGATCGAACTCCTCGATATTGATACGGGCTGTCGGATTTT
GATTGACGATACGTTATGATTTACAGCAATTTTTTTAGTATACTCGTCAT
TATTCACGAGTGGTCGTTGTCGAGGTGCGGTTCCTACCCGGTTCATTTGC
AGTGACGTCAAGGAAACCGTTGGCTAAGAGCATGATTTTTTTTTTTCACG
AGGTACGGGCATCGTTTCATGGTATTGTTATTTTCCATTCCAAATGAAAA
GAGGTGCAGTACAGGGTGTGGAGTTATACAGCGGACATCCCAATTCAAGG
CGGGCGGTAGGATTACACGACAATCCAAATTGGAGATGAGGCTACTCTCT
GCTTCGATACCCTTTTCGGGGAACATTGGTCGTCAAACTGTGGTCACAGC
GGCTCAAGAATGTCCCAGTACTTGGGCGATTTTTGGCTCCTCCAAAAAGC
TAGGTCATTTTGGTGTACTTTTTATAGGTGAATAATGATGATACTTTTTG
ATGCCTTTTCGGGGGACCTTAGATGGATGGGGCAATCTGATCTATCATTT
ACCGTATACCGTATACCGTATATCAATGCCGGATTCAACTTTTGTTCTGA
AATGATTTAATCCGGCGCCGGAGGGATCAACATGTGTCAATGGTATTGCC
CTATTCAGTGTTATTTCCCATTTTGTCGTTGTTTAGATGATGACACGCCG
GGTGGAGGGTCCGACGCGTGGTACGCGTCGAATCTGTTTGCCACCGGGGG
TGTGGCCGCGGCTGTGGTGGTCGTGCTGGGCTTGCTCATCATGATGTGCT
GTTCTTGGCGGCATAAGCGAAGCAAGTCGAGCGTTGGCAGCATTCGGTGA
GTGTGTGCATGTGGCCGCGATATGGATCATTCTCCACTCTTGTGATACGC
ACCAGGCAGTAACGAGGCGTACATGGTTGCCCGCCGCTTAGCCGTGCCCT
ACGCATCATCATCACACAGTTTTATTCCGAACTGAGCCGTACGTGTTTTG
TCTACCCGATGATGCCTACGCTTTGTATCACCAGTACAAATGGGACTTAC
CAAGGTATAATTCATGTATCCGGGGAGGCGAATTGTTATTTTGGAACTCG
ATTTCACCGACATCAATGCCCATGTGCGTCCGAAAAAGCACGTCGATTGA
CATATCTTCGATTGTGTAAGGTATTTCCAACGAGAACGACACAAGTCTCG
GTGCCCGTAGTACCGTAGTCTCCGCGAAAATCGAGTTTGAAGAAATGATC
GCCCCGGGGCATTTACACCCCTCCCTTATGGTATCTCCCTGCCTCACATT
CCATCGGAACGCGTTCACCTAAAGAGATGAATAAATACGATAAATCTGTG
ATTAATAGTATATCTGTTTGAATTAGGGGCACATGTCCATGTCACGGGAA
TGATGAGCAGTGTACTCGATATACCATGGAGCATCGAAAAGCTCGGGTAG
ATCGCAGAGTATTCAATCCTGTACAGTACCTACCTACCATCCGGAAAGCA
AACAGGACCTGCATGTGTGTGACTCTTAACCGGATATACGACCACCTGGT
GACCATCCGTAGCGTGATTATTCGTGGACTTATTTGTAAATGAATAAAAT
ACGTGTTTACCCAAGACAAATCATTATAGTGGGAGATAGTCACGAATGTG
CTCCATTTGTATTTGTCCGGGGGGATGAATATCTTGCATCCCCCTCCTCA
TATTTTATTTTTTTTAATATCAGGAGGAGGTCCTCCAACGCCGGATCTAG
AGACATGCAAGGAGGGGGCAGCGGGTCAATCCTCTACCTTGGTTCCGATT
CCGGGTCCTCGTCGGAGTTCTTCTACAACAATGCCGTTAATAGCAATCGT
TTTAATGGCGGTGGTGGTGCGGGAATTACGGACATTCCTGAAGACCAGAC
CGTAGGCATGTCGTCCTCGTCTACACTGACAAAGAGCAAGAGTTTTCGGA
AGAAGCAGGAATTGTTGAACCCGTCGCGGTCTTCGTCTGTATCTCTGCTG
CAGGCGGGGACGCTGTCCACCGGCACAGACAGCAACGGTAAGCGTTTTTT
TGTTTTTGTTTATCGTGTTTTTTTTTTTTTTAATGTTTTTTTTTTAAATC
GTGTTTTTTTCATCCCCGGGAGATACAGACCAGGGCGAAACCTTTTCTGT
TTAGTTGTAAGACTACGATAGTTACGTACGTCCAGCCCTCGTACACCAAT
TGTATTATGATGCATGTCTTGATCAATTAATTATCACCTGGTCGATTTTA
TCCGTGGTGTTACAGTGATGTATTTGTGCACGCTGCAGTCATGTGGGTCC
AGGGTCCAGGGTGCAGGTGACGTTTTTTGCTGATTGCAGACGATTCGCGC
GCTAAATTAAAGTCGGAAATCTGAGAATCACCCCTCCCCCCCCGTAGAAA
AGCAGTAGATGCGCGCGTTTTCGGTAGCCTTCGAGAGTTTGTCATCTGAG
TCAGAGCTTTTGACGTGACCCTGAACGACTTGTATGATTGAAACGCGTGA
CAGAACCTTACCGCGAACCAGTTCCATCTTAAATTCTGATCTCTCTTGAC
ATGAATTTGTAATTGTGGTGACATAGTAGTTTGTAACTCTTGTCTCGTTA
GCAGGATTGAACAAAGGTTTTTGATCTATGTTGGTTGTATTTTTTAATAT
AATATTAGGTTGTGTGTGATTACTTGTTCTCTTTCCTCGTGGCCAACGTT
GAACTCCTAGTACAAGTACTTGCTCCAGAGTATTATTTACCGTACGGAAT
CGGCGTGCTGGTATTTCCGTGCGTATTTTTTTACTTTTATGCGCTTCTGC
TTTGCTGCCTGCCTGCCTTACCCCTCTTGTTCGACACTCTTGGTGTTGTC
AAGATACACACAGGACATTTAGTCCACCTGTTAGTGACAAAGACGGCCAC
GGACCATACGTCGAGTTCACCACCAACAAAGATGAGGTGCGAGGAACGTG
CCTCAAGGGCATCGTGTGCGCTAGGATTTGCTCTTTGCCGTCGTTGTTAC
GAATTCAATACGGGTCGTCGGCAAGGTTCATCCCCCTCGGACAGATACGA
CTAGAAGACACGAATGAATACGATAAATCTGGAATGAAAAGTAGATCTGT
TTCAGTTGGGGAAGATATCCATGTACTCGATATACCATGGAGCATAAAAA
AGCTCGGGCAGATCGAGTATTCAATATGTACAGTACCTAGTACTGTCCGG
AAAATAAACAAGACCTGTTCGCCGGGTATACCACCACCTTGTGAGCCTAG
GTAAAGTAATCATTCATACATATAGACTTGTAAATGAATAAATACGTGAC
AAATAATGACAGTTCGAGATAGTTACGAATGCTCCATGGGGTCTAAGGCT
TCCACTCTTTTGTTTTCTGTCGTTCTCTTCTCGTCGATTTAATTATTCTA
TATATATATATATTTTTTTTTTCTAGCGCGGGAGTGATAACGCGCCAAGA
TTATGTCTGGAAAAAATGGTAAACCCCGGTCAAAAATCGAAAACCCAACA
CTTTCTATGCGAAGTACACAAGTGAGTATGTTTTGCTGCAGTAAAGTCTC
TTCACGGCTATGAGACACGAGGTACAATACCTCGGGTTGGTCACGGACCT
ACGCCCGAACGGGTAGGGTAGCTCGTGAACTAAGCATGACCGGAAGTCTA
GTCAGAGGTCTTTTAGTGGGTGCAACCCCCACACTGCCTACTTGGTTCGG
CCGAACCGGGGTGGCGCCTACCCCGCAGAGGAATAAATGACTGTTCTATT
AAAGGAAATGTAGAAAAAAACTATGGTATGGAAGCATCGGATAGAGTTTT
TTGCCTTAGCCTTCCGGGGGTTTATAAAAAAAAAACAACTCCGGTTGAAA
AGTACCACCCATGGCTAAAATGTACACATCAGTTTTTTTTTTTTTTTTTT
CTCGTTTCCACGTTTCTTGTCTCCAAATGCTTCAGATACGAGGACCCGAG
TTGCTGGCGGATGGGCTTGAGCTTAACCCAATGCAACCGGTCAGTGTCCC
TACTGCTGCTACCGATACGGCTGTCGAACCCGACAGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig4042:826..5412- >mRNA_H-paniculata_contig4042.10459.1 ID=mRNA_H-paniculata_contig4042.10459.1|Name=mRNA_H-paniculata_contig4042.10459.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1350bp|location=Sequence derived from alignment at H-paniculata_contig4042:826..5412- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCCGATGTCCCCGATGGCCGATGTCCCCGATGATGACACGCCGGGTG
GAGGGTCCGACGCGTGGTACGCGTCGAATCTGTTTGCCACCGGGGGTGTG
GCCGCGGCTGTGGTGGTCGTGCTGGGCTTGCTCATCATGATGTGCTGTTC
TTGGCGGCATAAGCGAAGCAAGTCGAGCGTTGGCAGCATTCGATGATGAC
ACGCCGGGTGGAGGGTCCGACGCGTGGTACGCGTCGAATCTGTTTGCCAC
CGGGGGTGTGGCCGCGGCTGTGGTGGTCGTGCTGGGCTTGCTCATCATGA
TGTGCTGTTCTTGGCGGCATAAGCGAAGCAAGTCGAGCGTTGGCAGCATT
CGGAGGAGGTCCTCCAACGCCGGATCTAGAGACATGCAAGGAGGGGGCAG
CGGGTCAATCCTCTACCTTGGTTCCGATTCCGGGTCCTCGTCGGAGTTCT
TCTACAACAATGCCGTTAATAGCAATCGTTTTAATGGCGGTGGTGGTGCG
GGAATTACGGACATTCCTGAAGACCAGACCGTAGGCATGTCGTCCTCGTC
TACACTGACAAAGAGCAAGAGTTTTCGGAAGAAGCAGGAATTGTTGAACC
CGTCGCGGTCTTCGTCTGTATCTCTGCTGCAGGCGGGGACGCTGTCCACC
GGCACAGACAGCAACGGAGGAGGTCCTCCAACGCCGGATCTAGAGACATG
CAAGGAGGGGGCAGCGGGTCAATCCTCTACCTTGGTTCCGATTCCGGGTC
CTCGTCGGAGTTCTTCTACAACAATGCCGTTAATAGCAATCGTTTTAATG
GCGGTGGTGGTGCGGGAATTACGGACATTCCTGAAGACCAGACCGTAGGC
ATGTCGTCCTCGTCTACACTGACAAAGAGCAAGAGTTTTCGGAAGAAGCA
GGAATTGTTGAACCCGTCGCGGTCTTCGTCTGTATCTCTGCTGCAGGCGG
GGACGCTGTCCACCGGCACAGACAGCAACGATACACACAGGACATTTAGT
CCACCTGTTAGTGACAAAGACGGCCACGGACCATACGTCGAGTTCACCAC
CAACAAAGATGAGATACACACAGGACATTTAGTCCACCTGTTAGTGACAA
AGACGGCCACGGACCATACGTCGAGTTCACCACCAACAAAGATGAGATAC
GAGGACCCGAGTTGCTGGCGGATGGGCTTGAGCTTAACCCAATGCAACCG
GTCAGTGTCCCTACTGCTGCTACCGATACGGCTGTCGAACCCGACAGGAT
ACGAGGACCCGAGTTGCTGGCGGATGGGCTTGAGCTTAACCCAATGCAAC
CGGTCAGTGTCCCTACTGCTGCTACCGATACGGCTGTCGAACCCGACAGG back to top
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