mRNA_H-paniculata_contig40333.10443.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig40333.10443.1 vs. uniprot
Match: A0A6H5JR26_9PHAE (DDE-1 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR26_9PHAE) HSP 1 Score: 136 bits (343), Expect = 4.570e-37 Identity = 66/124 (53.23%), Postives = 86/124 (69.35%), Query Frame = 1
Query: 1 ENMTVVATINAAGAKMPPLFSYKGQRVQAAWVCN-RAPPGLWYAVTDSSFMQEPVYLSFMKKFKEFIDNNGLNDGRPHVLVLDEHASHVTINVLKYAMEHNTHLFQLPSHSSHITQPLDVCAFG 369
EN+T+V TINAAGA + P +KGQR WV + PPG +Y T+SSFM V++ +++ F + + L DG+PHVLVLD HASHV+++V+K A+ N HL QLPSH SHITQPLDV FG
Sbjct: 139 ENVTIVTTINAAGAVLAPTIIFKGQRFNGDWVADLNGPPGAYYDCTESSFMCGDVFIKYIQNFHKQLGERNLLDGKPHVLVLDGHASHVSLDVIKLAISLNIHLVQLPSHMSHITQPLDVAGFG 262
BLAST of mRNA_H-paniculata_contig40333.10443.1 vs. uniprot
Match: A0A6H5JYX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYX7_9PHAE) HSP 1 Score: 139 bits (350), Expect = 1.310e-36 Identity = 68/124 (54.84%), Postives = 86/124 (69.35%), Query Frame = 1
Query: 1 ENMTVVATINAAGAKMPPLFSYKGQRVQAAWVCN-RAPPGLWYAVTDSSFMQEPVYLSFMKKFKEFIDNNGLNDGRPHVLVLDEHASHVTINVLKYAMEHNTHLFQLPSHSSHITQPLDVCAFG 369
EN T+V TINAAGA + P +KGQR WV + PPG +Y T+SSFM V++ ++K F + + + L DG+PHVLVLD HASHVT++V+K A+ N HL QLPSH SHITQPLDV FG
Sbjct: 215 ENCTIVTTINAAGAVLAPTIIFKGQRFNGDWVADLNGPPGAYYDCTESSFMCGEVFIKYIKNFHKQLGDRNLLDGKPHVLVLDGHASHVTLDVIKLAISLNIHLVQLPSHMSHITQPLDVAGFG 338
BLAST of mRNA_H-paniculata_contig40333.10443.1 vs. uniprot
Match: A0A6H5J9B8_9PHAE (DDE-1 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9B8_9PHAE) HSP 1 Score: 135 bits (341), Expect = 2.650e-36 Identity = 69/124 (55.65%), Postives = 85/124 (68.55%), Query Frame = 1
Query: 1 ENMTVVATINAAGAKMPPLFSYKGQRVQAAWVCNR-APPGLWYAVTDSSFMQEPVYLSFMKKFKEFIDNNGLNDGRPHVLVLDEHASHVTINVLKYAMEHNTHLFQLPSHSSHITQPLDVCAFG 369
EN TVV TI+A GA P ++GQR+Q W R P Y TDSSFMQ V++ + K F + +D+ G+ DG+PH LVLDEHAS+V+ V+K AME N LFQLPSH+SHITQPLDV AFG
Sbjct: 21 ENTTVVTTISANGATWAPTIIFRGQRLQPDWFAERNGPKDARYTCTDSSFMQGDVFIKYFKDFHKQLDDRGVLDGKPHTLVLDEHASYVSYEVIKLAMELNIILFQLPSHTSHITQPLDVVAFG 144
BLAST of mRNA_H-paniculata_contig40333.10443.1 vs. uniprot
Match: A0A6H5JBS6_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBS6_9PHAE) HSP 1 Score: 137 bits (345), Expect = 3.490e-36 Identity = 70/124 (56.45%), Postives = 85/124 (68.55%), Query Frame = 1
Query: 1 ENMTVVATINAAGAKMPPLFSYKGQRVQAAWVCNR-APPGLWYAVTDSSFMQEPVYLSFMKKFKEFIDNNGLNDGRPHVLVLDEHASHVTINVLKYAMEHNTHLFQLPSHSSHITQPLDVCAFG 369
EN TVV TI+A GA P +KGQR+Q W R P Y TDSSFMQ V++ ++K F + +D+ G+ DG+PH LVLD HASHV+ V+K AME N LFQLPSH+SHITQPLDV AFG
Sbjct: 195 ENTTVVTTISANGATWAPTIIFKGQRLQPDWFAERNGPKDARYTCTDSSFMQGDVFIKYLKDFHKQLDDRGVLDGKPHTLVLDGHASHVSYEVIKLAMELNIILFQLPSHTSHITQPLDVVAFG 318
BLAST of mRNA_H-paniculata_contig40333.10443.1 vs. uniprot
Match: A0A6H5L108_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L108_9PHAE) HSP 1 Score: 131 bits (329), Expect = 6.380e-36 Identity = 68/123 (55.28%), Postives = 83/123 (67.48%), Query Frame = 1
Query: 1 ENMTVVATINAAGAKMPPLFSYKGQRVQAAWVCNR-APPGLWYAVTDSSFMQEPVYLSFMKKFKEFIDNNGLNDGRPHVLVLDEHASHVTINVLKYAMEHNTHLFQLPSHSSHITQPLDVCAF 366
EN TVV TI+A GA P +KGQRVQ W R P Y TDSSF+Q V++ ++K F + +D G+ +G+PHVLV D HASHV+ V+K AME N LFQLPSH+SHITQPLDV AF
Sbjct: 82 ENTTVVTTISANGATWAPTIIFKGQRVQPDWFAERNGPKDARYTCTDSSFVQGDVFIKYLKDFHKQLDGRGVLEGKPHVLVHDGHASHVSYEVIKLAMELNIILFQLPSHTSHITQPLDVVAF 204
BLAST of mRNA_H-paniculata_contig40333.10443.1 vs. uniprot
Match: A0A6H5JRL2_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL2_9PHAE) HSP 1 Score: 132 bits (333), Expect = 1.300e-35 Identity = 64/124 (51.61%), Postives = 84/124 (67.74%), Query Frame = 1
Query: 1 ENMTVVATINAAGAKMPPLFSYKGQRVQAAWVCN-RAPPGLWYAVTDSSFMQEPVYLSFMKKFKEFIDNNGLNDGRPHVLVLDEHASHVTINVLKYAMEHNTHLFQLPSHSSHITQPLDVCAFG 369
EN T++ TINAAGA + P F +KGQR WV + PPG + T+SSFM V++ ++K F + + + L DG+PHVLVLD H SHV+++V+K + N HL QLPSH SHITQPLDV FG
Sbjct: 60 ENCTIITTINAAGAVLAPTFIFKGQRFNGDWVADLNGPPGAFNDCTESSFMCGEVFIKYIKNFHKQLGDRNLLDGKPHVLVLDGHTSHVSLDVIKLVISLNIHLVQLPSHMSHITQPLDVAGFG 183
BLAST of mRNA_H-paniculata_contig40333.10443.1 vs. uniprot
Match: A0A6H5JR11_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR11_9PHAE) HSP 1 Score: 132 bits (331), Expect = 1.740e-35 Identity = 65/124 (52.42%), Postives = 81/124 (65.32%), Query Frame = 1
Query: 1 ENMTVVATINAAGAKMPPLFSYKGQRVQAAWVCNR-APPGLWYAVTDSSFMQEPVYLSFMKKFKEFIDNNGLNDGRPHVLVLDEHASHVTINVLKYAMEHNTHLFQLPSHSSHITQPLDVCAFG 369
EN T+V TINAAGA + P +KG R W+ +R PPG Y T+SSFM V++ ++K F E + L DG+PHVLVLD HASHV+ V++ A N HL QLPSH SH+TQPLDV FG
Sbjct: 137 ENCTIVTTINAAGAVLDPTVIFKGVRFNQDWIADRNGPPGATYTCTESSFMCGDVFIKYIKNFHEQLRRRNLLDGKPHVLVLDGHASHVSFEVIQLAKSLNIHLVQLPSHMSHVTQPLDVAGFG 260
BLAST of mRNA_H-paniculata_contig40333.10443.1 vs. uniprot
Match: A0A6H5KGL1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGL1_9PHAE) HSP 1 Score: 133 bits (335), Expect = 3.290e-35 Identity = 67/124 (54.03%), Postives = 85/124 (68.55%), Query Frame = 1
Query: 1 ENMTVVATINAAGAKMPPLFSYKGQRVQAAWVCNR-APPGLWYAVTDSSFMQEPVYLSFMKKFKEFIDNNGLNDGRPHVLVLDEHASHVTINVLKYAMEHNTHLFQLPSHSSHITQPLDVCAFG 369
EN TVV TI+A GA P +KGQR+Q W R P Y TDSSFMQ V++ ++K F + +D+ G+ DG+PH+LVLD HASHV+ +K AM+ N LF+LPSH+SHITQPLDV AFG
Sbjct: 21 ENTTVVTTISANGATWAPTIIFKGQRLQPDWFAERNGPKDARYTCTDSSFMQGDVFIMYLKDFHKQLDDRGVLDGKPHILVLDGHASHVSYEFIKLAMDLNIILFKLPSHTSHITQPLDVVAFG 144
BLAST of mRNA_H-paniculata_contig40333.10443.1 vs. uniprot
Match: A0A6H5K717_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K717_9PHAE) HSP 1 Score: 128 bits (322), Expect = 5.240e-35 Identity = 67/124 (54.03%), Postives = 85/124 (68.55%), Query Frame = 1
Query: 1 ENMTVVATINAAGAKMPPLFSYKGQRVQAAWVCNR-APPGLWYAVTDSSFMQEPVYLSFMKKFKEFIDNNGLNDGRPHVLVLDEHASHVTINVLKYAMEHNTHLFQLPSHSSHITQPLDVCAFG 369
EN+TVV TI+ AGA + P YKGQR+QA WV R PP AVTDSSFMQ ++++++ F + + L +G PHVL LD HASHVT V+K A E N L+Q+PSHSSH+ QPLDV +FG
Sbjct: 21 ENVTVVVTISTAGATLAPWIIYKGQRLQADWVEGRNGPPNARLAVTDSSFMQGIAFVNYVRDFHRQLLDRDLINGTPHVLALDGHASHVTYEVVKLARELNIVLYQIPSHSSHVVQPLDVGSFG 144
BLAST of mRNA_H-paniculata_contig40333.10443.1 vs. uniprot
Match: A0A6H5L5E2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5E2_9PHAE) HSP 1 Score: 133 bits (335), Expect = 8.300e-35 Identity = 69/124 (55.65%), Postives = 88/124 (70.97%), Query Frame = 1
Query: 1 ENMTVVATINAAGAKMPPLFSYKGQRVQAAWVCNR-APPGLWYAVTDSSFMQEPVYLSFMKKFKEFIDNNGLNDGRPHVLVLDEHASHVTINVLKYAMEHNTHLFQLPSHSSHITQPLDVCAFG 369
EN+TVV TI+AAGA + P YKGQR+QA WV R PP AV DSSFMQ V++++++ F + + GL +G PHVLVLD HASHVT V+K A + N L+Q+PSHSSH+ QPLDV +FG
Sbjct: 201 ENVTVVVTISAAGATLAPWIIYKGQRLQADWVKGRNGPPNARLAVIDSSFMQGTVFVNYIRDFHRQLLDRGLINGTPHVLVLDGHASHVTYEVVKLARDLNIVLYQIPSHSSHVVQPLDVGSFG 324 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig40333.10443.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig40333.10443.1 >prot_H-paniculata_contig40333.10443.1 ID=prot_H-paniculata_contig40333.10443.1|Name=mRNA_H-paniculata_contig40333.10443.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=121bp MTVVATINAAGAKMPPLFSYKGQRVQAAWVCNRAPPGLWYAVTDSSFMQEback to top mRNA from alignment at H-paniculata_contig40333:737..1105- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig40333.10443.1 ID=mRNA_H-paniculata_contig40333.10443.1|Name=mRNA_H-paniculata_contig40333.10443.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=369bp|location=Sequence derived from alignment at H-paniculata_contig40333:737..1105- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig40333:737..1105- >mRNA_H-paniculata_contig40333.10443.1 ID=mRNA_H-paniculata_contig40333.10443.1|Name=mRNA_H-paniculata_contig40333.10443.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=726bp|location=Sequence derived from alignment at H-paniculata_contig40333:737..1105- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |