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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 1605 |
| Cds size | 1602 |
| Stop | 0 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4023.10422.1 >prot_H-paniculata_contig4023.10422.1 ID=prot_H-paniculata_contig4023.10422.1|Name=mRNA_H-paniculata_contig4023.10422.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=534bp
MEDSVKGASGVGFRGGGDDASRGGGGGSGGGGVYCADAATTDYSEATRNL
GCDDVGEAAVFDERGIRTHRDATVKHKQPHRYDSVNGGLDIRQEEENIAS
FQLGAPERVAGARGRGGGGASEAINHSEERWRYSEAGDPEEKRAEESQYD
EDGYGTASFETEEAQNKDWSEGEKSAEFESGVAARGDISYVRKKERYRSG
GYEEIPESGGGGFRSRRRNGGGGSEISTAPGVTAEVPSASQNTRPEENRV
RATLSNMGFEAANGGCNTVDSVDHWAAAPSGVVSDRGYNPKSASRASVGA
RVRGRAVGDMAAKSVRRLEIVHVPTMPANVPRVRLARKVSGPRKVSRKSA
SSASSQPGSGKRRMGIATKMARPRGGSRLTNSSRGGEAGSAARQRPKASS
ATERSRESSRVLQATVSSSRGRHTGNGVYSRGSTTGNGLVRAASARPRGR
NDPGFRPGSSTGLRVAADNRKNTARPGGGGASRAASSAGESSEKRRRQSV
AATNDVMSPASHVRETRRGVVAYSPPASPDRSQA back to topmRNA from alignment at H-paniculata_contig4023:8691..10294+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig4023.10422.1 ID=mRNA_H-paniculata_contig4023.10422.1|Name=mRNA_H-paniculata_contig4023.10422.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1604bp|location=Sequence derived from alignment at H-paniculata_contig4023:8691..10294+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCATGGAGGATAGCGTGAAGGGGGCTAGCGGCGTTGGGTTTCGCGGTGGT
GGTGATGATGCCAGCCGTGGCGGCGGCGGTGGCAGCGGCGGCGGGGGGGT
TTATTGTGCTGATGCAGCAACGACGGATTATTCTGAAGCTACCCGGAATC
TTGGTTGTGATGATGTAGGCGAGGCAGCGGTGTTTGATGAACGAGGGATT
CGGACTCACCGTGATGCTACTGTCAAGCACAAACAGCCCCACCGCTATGA
CAGCGTGAACGGAGGCTTGGATATTCGGCAAGAAGAGGAGAATATCGCTT
CATTTCAGCTGGGTGCACCAGAAAGAGTCGCCGGGGCACGCGGGAGGGGC
GGGGGGGGCGCTAGCGAGGCCATAAATCATAGTGAAGAACGGTGGAGATA
TTCCGAGGCAGGAGACCCTGAAGAGAAGAGGGCGGAGGAGTCACAGTACG
ACGAAGACGGGTACGGTACGGCTTCGTTTGAAACCGAGGAGGCTCAGAAC
AAGGATTGGTCGGAAGGAGAAAAATCGGCGGAGTTCGAGTCCGGGGTGGC
GGCACGAGGCGATATTAGTTATGTGCGTAAAAAGGAAAGATATCGGTCGG
GAGGGTACGAGGAGATTCCAGAAAGTGGTGGTGGTGGTTTTCGGTCCCGT
CGTCGTAATGGCGGCGGCGGCAGCGAAATTAGTACTGCGCCTGGTGTAAC
GGCCGAGGTCCCCAGCGCTTCGCAGAATACACGACCGGAGGAAAATCGCG
TGCGAGCGACCTTGTCGAACATGGGTTTTGAGGCTGCCAACGGTGGCTGC
AATACTGTTGATTCAGTCGACCACTGGGCTGCTGCTCCTTCCGGTGTGGT
GTCGGACAGGGGTTACAACCCAAAGTCAGCGAGCAGGGCTAGCGTGGGTG
CTCGAGTACGGGGAAGAGCCGTGGGGGATATGGCAGCGAAGAGTGTCCGA
CGGTTGGAAATTGTCCATGTGCCGACAATGCCGGCCAATGTACCGAGGGT
AAGATTGGCGAGGAAGGTATCTGGGCCGCGAAAAGTTTCGCGAAAAAGTG
CTTCGTCCGCTTCGTCACAGCCAGGGTCTGGCAAGCGTCGCATGGGAATA
GCAACGAAAATGGCGCGTCCAAGGGGAGGGTCTAGGCTGACCAATTCTTC
ACGGGGTGGTGAAGCGGGTTCCGCGGCGCGACAGCGACCAAAGGCTAGCA
GTGCCACGGAGAGGTCTAGGGAAAGCAGCCGGGTCTTGCAAGCGACGGTT
TCGTCATCTCGCGGCAGACATACAGGAAACGGTGTATATTCGCGTGGGAG
TACTACCGGCAATGGACTTGTGCGCGCCGCGAGTGCTCGACCGCGGGGTA
GAAATGACCCCGGGTTTAGGCCAGGCTCCAGTACCGGGTTAAGGGTGGCC
GCTGACAATCGGAAAAACACAGCGCGACCGGGGGGCGGCGGCGCGTCGAG
AGCAGCAAGTAGCGCCGGCGAAAGCAGCGAAAAACGGAGGCGTCAGAGCG
TCGCAGCGACCAATGACGTCATGAGTCCCGCTTCTCATGTTCGAGAGACC
CGGCGGGGAGTTGTAGCATATTCCCCCCCAGCTTCGCCGGATCGCTCCCA
AGCT back to topCoding sequence (CDS) from alignment at H-paniculata_contig4023:8691..10294+ >mRNA_H-paniculata_contig4023.10422.1 ID=mRNA_H-paniculata_contig4023.10422.1|Name=mRNA_H-paniculata_contig4023.10422.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3204bp|location=Sequence derived from alignment at H-paniculata_contig4023:8691..10294+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGAGGATAGCGTGAAGGGGGCTAGCGGCGTTGGGTTTCGCGGTGGTGG
TGATGATGCCAGCCGTGGCGGCGGCGGTGGCAGCGGCGGCGGGGGGGTTT
ATTGTGCTGATGCAGCAACGACGGATTATTCTGAAGCTACCCGGAATCTT
GGTTGTGATGATGTAGGCGAGGCAGCGGTGTTTGATGAACGAGGGATTCG
GACTCACCGTGATGCTACTGTCAAGCACAAACAGCCCCACCGCTATGACA
GCGTGAACGGAGGCTTGGATATTCGGCAAGAAGAGGAGAATATCGCTTCA
TTTCAGCTGGGTGCACCAGAAAGAGTCGCCGGGGCACGCGGGAGGGGCGG
GGGGGGCGCTAGCGAGGCCATAAATCATAGTGAAGAACGGTGGAGATATT
CCGAGGCAGGAGACCCTGAAGAGAAGAGGGCGGAGGAGTCACAGTACGAC
GAAGACGGGTACGGTACGGCTTCGTTTGAAACCGAGGAGGCTCAGAACAA
GGATTGGTCGGAAGGAGAAAAATCGGCGGAGTTCGAGTCCGGGGTGGCGG
CACGAGGCGATATTAGTTATGTGCGTAAAAAGGAAAGATATCGGTCGGGA
GGGTACGAGGAGATTCCAGAAAGTGGTGGTGGTGGTTTTCGGTCCCGTCG
TCGTAATGGCGGCGGCGGCAGCGAAATTAGTACTGCGCCTGGTGTAACGG
CCGAGGTCCCCAGCGCTTCGCAGAATACACGACCGGAGGAAAATCGCGTG
CGAGCGACCTTGTCGAACATGGGTTTTGAGGCTGCCAACGGTGGCTGCAA
TACTGTTGATTCAGTCGACCACTGGGCTGCTGCTCCTTCCGGTGTGGTGT
CGGACAGGGGTTACAACCCAAAGTCAGCGAGCAGGGCTAGCGTGGGTGCT
CGAGTACGGGGAAGAGCCGTGGGGGATATGGCAGCGAAGAGTGTCCGACG
GTTGGAAATTGTCCATGTGCCGACAATGCCGGCCAATGTACCGAGGGTAA
GATTGGCGAGGAAGGTATCTGGGCCGCGAAAAGTTTCGCGAAAAAGTGCT
TCGTCCGCTTCGTCACAGCCAGGGTCTGGCAAGCGTCGCATGGGAATAGC
AACGAAAATGGCGCGTCCAAGGGGAGGGTCTAGGCTGACCAATTCTTCAC
GGGGTGGTGAAGCGGGTTCCGCGGCGCGACAGCGACCAAAGGCTAGCAGT
GCCACGGAGAGGTCTAGGGAAAGCAGCCGGGTCTTGCAAGCGACGGTTTC
GTCATCTCGCGGCAGACATACAGGAAACGGTGTATATTCGCGTGGGAGTA
CTACCGGCAATGGACTTGTGCGCGCCGCGAGTGCTCGACCGCGGGGTAGA
AATGACCCCGGGTTTAGGCCAGGCTCCAGTACCGGGTTAAGGGTGGCCGC
TGACAATCGGAAAAACACAGCGCGACCGGGGGGCGGCGGCGCGTCGAGAG
CAGCAAGTAGCGCCGGCGAAAGCAGCGAAAAACGGAGGCGTCAGAGCGTC
GCAGCGACCAATGACGTCATGAGTCCCGCTTCTCATGTTCGAGAGACCCG
GCGGGGAGTTGTAGCATATTCCCCCCCAGCTTCGCCGGATCGCTCCCAAG
CTATGGAGGATAGCGTGAAGGGGGCTAGCGGCGTTGGGTTTCGCGGTGGT
GGTGATGATGCCAGCCGTGGCGGCGGCGGTGGCAGCGGCGGCGGGGGGGT
TTATTGTGCTGATGCAGCAACGACGGATTATTCTGAAGCTACCCGGAATC
TTGGTTGTGATGATGTAGGCGAGGCAGCGGTGTTTGATGAACGAGGGATT
CGGACTCACCGTGATGCTACTGTCAAGCACAAACAGCCCCACCGCTATGA
CAGCGTGAACGGAGGCTTGGATATTCGGCAAGAAGAGGAGAATATCGCTT
CATTTCAGCTGGGTGCACCAGAAAGAGTCGCCGGGGCACGCGGGAGGGGC
GGGGGGGGCGCTAGCGAGGCCATAAATCATAGTGAAGAACGGTGGAGATA
TTCCGAGGCAGGAGACCCTGAAGAGAAGAGGGCGGAGGAGTCACAGTACG
ACGAAGACGGGTACGGTACGGCTTCGTTTGAAACCGAGGAGGCTCAGAAC
AAGGATTGGTCGGAAGGAGAAAAATCGGCGGAGTTCGAGTCCGGGGTGGC
GGCACGAGGCGATATTAGTTATGTGCGTAAAAAGGAAAGATATCGGTCGG
GAGGGTACGAGGAGATTCCAGAAAGTGGTGGTGGTGGTTTTCGGTCCCGT
CGTCGTAATGGCGGCGGCGGCAGCGAAATTAGTACTGCGCCTGGTGTAAC
GGCCGAGGTCCCCAGCGCTTCGCAGAATACACGACCGGAGGAAAATCGCG
TGCGAGCGACCTTGTCGAACATGGGTTTTGAGGCTGCCAACGGTGGCTGC
AATACTGTTGATTCAGTCGACCACTGGGCTGCTGCTCCTTCCGGTGTGGT
GTCGGACAGGGGTTACAACCCAAAGTCAGCGAGCAGGGCTAGCGTGGGTG
CTCGAGTACGGGGAAGAGCCGTGGGGGATATGGCAGCGAAGAGTGTCCGA
CGGTTGGAAATTGTCCATGTGCCGACAATGCCGGCCAATGTACCGAGGGT
AAGATTGGCGAGGAAGGTATCTGGGCCGCGAAAAGTTTCGCGAAAAAGTG
CTTCGTCCGCTTCGTCACAGCCAGGGTCTGGCAAGCGTCGCATGGGAATA
GCAACGAAAATGGCGCGTCCAAGGGGAGGGTCTAGGCTGACCAATTCTTC
ACGGGGTGGTGAAGCGGGTTCCGCGGCGCGACAGCGACCAAAGGCTAGCA
GTGCCACGGAGAGGTCTAGGGAAAGCAGCCGGGTCTTGCAAGCGACGGTT
TCGTCATCTCGCGGCAGACATACAGGAAACGGTGTATATTCGCGTGGGAG
TACTACCGGCAATGGACTTGTGCGCGCCGCGAGTGCTCGACCGCGGGGTA
GAAATGACCCCGGGTTTAGGCCAGGCTCCAGTACCGGGTTAAGGGTGGCC
GCTGACAATCGGAAAAACACAGCGCGACCGGGGGGCGGCGGCGCGTCGAG
AGCAGCAAGTAGCGCCGGCGAAAGCAGCGAAAAACGGAGGCGTCAGAGCG
TCGCAGCGACCAATGACGTCATGAGTCCCGCTTCTCATGTTCGAGAGACC
CGGCGGGGAGTTGTAGCATATTCCCCCCCAGCTTCGCCGGATCGCTCCCA
AGCT back to top
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