mRNA_H-paniculata_contig40207.10415.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig40207.10415.1 vs. uniprot
Match: D8LSW0_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW0_ECTSI) HSP 1 Score: 174 bits (442), Expect = 1.680e-47 Identity = 87/165 (52.73%), Postives = 115/165 (69.70%), Query Frame = 2
Query: 2 CMTPLDAEDYMSNESFDIETYCPMYDCDGYGADSPN--CLGEDVLDTLVKNNGVAPGAKLAIFDDSQDGWWGYGDLAGNFLWNSTFGTGTKIHSNSWGLYGFCESTEFDFLYDTFMSENPEHLIIFAAGNDGGYKDSPYLSYADCTVASPALGKNILAVGSTSNG 490
C++ D + + + +FD++ +CPMY CDG D P+ CL +D ++ L ++ GVAPGA++++FD S G Y AGN LW S TG KIH+NSWG C+ TE ++LYDTFM ENPEHL+IFAAGNDGGY+D P + CTV SPALGKN LAVG+TS+G
Sbjct: 545 CISASDVDAMLDDSTFDLDVFCPMYTCDG-NTDIPSSECLSDDPVENLHQHGGVAPGAQISVFDVSYVGTEIYASFAGNDLWYSAMETGAKIHTNSWGGATLCQLTEDEYLYDTFMYENPEHLLIFAAGNDGGYEDIP--NREACTVGSPALGKNSLAVGATSSG 706
BLAST of mRNA_H-paniculata_contig40207.10415.1 vs. uniprot
Match: A0A6H5KDF8_9PHAE (Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDF8_9PHAE) HSP 1 Score: 169 bits (429), Expect = 3.180e-47 Identity = 84/165 (50.91%), Postives = 113/165 (68.48%), Query Frame = 2
Query: 2 CMTPLDAEDYMSNESFDIETYCPMYDCDGYGADSPN--CLGEDVLDTLVKNNGVAPGAKLAIFDDSQDGWWGYGDLAGNFLWNSTFGTGTKIHSNSWGLYGFCESTEFDFLYDTFMSENPEHLIIFAAGNDGGYKDSPYLSYADCTVASPALGKNILAVGSTSNG 490
C++ D E + + +FD++ +CPMY CDG D P+ CL +D ++ L ++ G APGA++++FD S G Y AGN LW S TG KIH+NSWG C+ TE +++YD FM ENPEHL+IF+AGNDGGY+D P + CTV SPALGKN LAVG+TS+G
Sbjct: 250 CISASDVEAMLDDSTFDLDVFCPMYTCDG-NTDIPSSECLSDDPVENLHQHGGAAPGAQISVFDVSYVGTEVYASWAGNDLWYSAMETGAKIHTNSWGGATLCQLTEKEYMYDMFMYENPEHLLIFSAGNDGGYEDIP--NREACTVGSPALGKNSLAVGATSSG 411
BLAST of mRNA_H-paniculata_contig40207.10415.1 vs. uniprot
Match: D8LU20_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU20_ECTSI) HSP 1 Score: 172 bits (437), Expect = 7.660e-47 Identity = 86/167 (51.50%), Postives = 116/167 (69.46%), Query Frame = 2
Query: 2 CMTPLDAEDYMSNESFDIETYCPMYDCDGYGADSPN--CLGEDVLDTLVKNNGVAPGAKLAIFDDSQDGWWGYGDLAGNFLWNSTFGTGTKIHSNSWGLYGFCESTEFDFLYDTFMSENPEHLIIFAAGNDGGYKDSPYLSYADCTVASPALGKNILAVGSTSNGRS 496
C++ D + + N SFD++ +CPMY+CDG D P+ CL +D ++ L ++ GVAPGA++++ D S G + AGN LW S TG KIHSNSWG C+ TE ++LYD+FM ENPEHL+IFAAGN GG +D P ++ CT+ SPALGKNILAVG+TS+G S
Sbjct: 504 CISASDVDAMLDNGSFDLDVFCPMYNCDG-NTDIPSSECLSDDPVENLHQHGGVAPGAQISMLDASYTGSDSFALFAGNMLWYSAMETGAKIHSNSWGYDMLCQLTENEYLYDSFMYENPEHLLIFAAGNHGGNEDIP--NHEGCTIGSPALGKNILAVGATSSGPS 667
BLAST of mRNA_H-paniculata_contig40207.10415.1 vs. uniprot
Match: A0A6H5JQ52_9PHAE (Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ52_9PHAE) HSP 1 Score: 169 bits (428), Expect = 5.160e-46 Identity = 84/164 (51.22%), Postives = 111/164 (67.68%), Query Frame = 2
Query: 2 CMTPLDAEDYMSNESFDIETYCPMYDCDG-YGADSPNCLGEDVLDTLVKNNGVAPGAKLAIFDDSQDGWWGYGDLAGNFLWNSTFGTGTKIHSNSWGLYGFCESTEFDFLYDTFMSENPEHLIIFAAGNDGGYKDSPYLSYADCTVASPALGKNILAVGSTSNG 490
C++ D + + + +F + +CPMY CDG S CL +D ++ L ++ GVAPGA++++FD S G Y AGN LW S TG KIH+NSWG C+ TE +++YDTFM ENPEHL+IF+AGNDGGY D P + CTV SPALGKNILAVG+TS+G
Sbjct: 457 CISASDVDAMLDDSTFHLVVFCPMYTCDGNIDIPSSECLSDDPVEDLHQHGGVAPGAQISVFDFSYVGTEVYASWAGNDLWYSAMETGAKIHTNSWGGATLCQLTEKEYMYDTFMYENPEHLLIFSAGNDGGYDDIP--NREACTVGSPALGKNILAVGATSSG 618
BLAST of mRNA_H-paniculata_contig40207.10415.1 vs. uniprot
Match: D8LBZ2_ECTSI (Subtilisin (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBZ2_ECTSI) HSP 1 Score: 133 bits (334), Expect = 3.510e-33 Identity = 69/153 (45.10%), Postives = 98/153 (64.05%), Query Frame = 2
Query: 41 ESFDIETYCPMYDCDGYGADSPN--CLGEDVLDTLVKNNGVAPGAKLAIFDDSQDGWWGYG-DLAGNFLWNSTFGTGTKIHSNSWGLYGFCESTEFDFLYDTFMSENPEHLIIFAAGNDGGYKDSPYLSYADCTVASPALGKNILAVGSTSNG 490
E+ D++ CP DCD D P CLG+D +TL ++ GVA GA+LAIFD D + G G ++AGN +W G+K+ SNSWG+Y +CE +D LYD FM N + L++FAAGNDG ++ CT+ SPA+ KN+LAVG++++G
Sbjct: 357 EAIDLDRLCPRLDCD----DRPEEYCLGDDEAETLQQHGGVARGAQLAIFDILDD-YTGIGIEMAGNGMWEPAMEAGSKLSSNSWGIYAYCEYLSYDVLYDDFMYRNQDQLLLFAAGNDGE-------EWSGCTMGSPAVAKNVLAVGASTSG 497
BLAST of mRNA_H-paniculata_contig40207.10415.1 vs. uniprot
Match: A0A6H5JKA8_9PHAE (Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKA8_9PHAE) HSP 1 Score: 130 bits (328), Expect = 3.830e-32 Identity = 68/153 (44.44%), Postives = 97/153 (63.40%), Query Frame = 2
Query: 41 ESFDIETYCPMYDCDGYGADSPN--CLGEDVLDTLVKNNGVAPGAKLAIFDDSQDGWWGYG-DLAGNFLWNSTFGTGTKIHSNSWGLYGFCESTEFDFLYDTFMSENPEHLIIFAAGNDGGYKDSPYLSYADCTVASPALGKNILAVGSTSNG 490
E+ D++ CP DCD D P CLG+D +TL ++ GVA GA+LAIFD D + G G D+AGN +W G+K+ SNSWG+Y +C+ D L+D FM N + L++FAAGNDG ++ CT+ +PAL KN+LAVG++++G
Sbjct: 640 EAIDLDRLCPRLDCD----DLPEEYCLGDDEAETLQQHGGVARGAQLAIFDIIND-YTGVGIDMAGNGMWEPAMEAGSKLSSNSWGIYAYCDYLSLDVLFDDFMYRNQDQLLLFAAGNDGD-------DWSGCTMGTPALAKNVLAVGASTSG 780
BLAST of mRNA_H-paniculata_contig40207.10415.1 vs. uniprot
Match: D8LQI1_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQI1_ECTSI) HSP 1 Score: 125 bits (315), Expect = 2.120e-30 Identity = 70/163 (42.94%), Postives = 92/163 (56.44%), Query Frame = 2
Query: 2 CMTPLDAEDYMSNESFDIETYCPMYDCDGYGADSPNCLGEDVLDTLVKNNGVAPGAKLAIFDDSQDGWWGYGDLAGNFLWNSTFGTGTKIHSNSWGLYGFCESTEFDFLYDTFMSENPEHLIIFAAGNDGGYKDSPYLSYADCTVASPALGKNILAVGSTSNG 490
C+T ++ DI CP + C G CL +D DTL ++ G+A GAK+A D G + YGDLAGN LW + G KIHSNS+G+ C+ T D LYD +M EN EHL++F+AGN G D CT+ SP + KN+L VGSTS+G
Sbjct: 506 CITESSTGSSEADYGEDINRLCPAFGCSG-----DQCLPDDTADTLSEHGGMAQGAKIAAIDVFY-GDYSYGDLAGNGLWETCADAGCKIHSNSYGVDLRCQLTALDVLYDEYMYENQEHLLLFSAGNTGWTTDRD-----TCTIDSPGIAKNVLTVGSTSSG 657
BLAST of mRNA_H-paniculata_contig40207.10415.1 vs. uniprot
Match: A0A6H5K229_9PHAE (Subtilisin n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K229_9PHAE) HSP 1 Score: 125 bits (313), Expect = 3.930e-30 Identity = 69/147 (46.94%), Postives = 94/147 (63.95%), Query Frame = 2
Query: 50 DIETYCPMYDCDGYGADSPNCLGEDVLDTLVKNNGVAPGAKLAIFDDSQDGWWGYGDLAGNFLWNSTFGTGTKIHSNSWGLYGFCESTEFDFLYDTFMSENPEHLIIFAAGNDGGYKDSPYLSYADCTVASPALGKNILAVGSTSNG 490
D++ CPMY CDG + CL ++V +TL KN G+A GAKL+IFD + + G ++ GN +W G K+HS S G C E + LYD FM ENPE+L+IFAAGNDG + S CT+ASPA+GKN+LAVG++++G
Sbjct: 531 DLDRLCPMYGCDG---STDPCLSDEVDETLTKNGGMAQGAKLSIFDVFFEVF-GLIEVLGNGVWEPCLEAGCKVHSLSLGGDTLCTPGESEILYDDFMYENPENLLIFAAGNDGETERSV------CTMASPAIGKNVLAVGASTSG 667
BLAST of mRNA_H-paniculata_contig40207.10415.1 vs. uniprot
Match: A0A6H5L2G3_9PHAE (Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2G3_9PHAE) HSP 1 Score: 123 bits (309), Expect = 1.190e-29 Identity = 67/147 (45.58%), Postives = 87/147 (59.18%), Query Frame = 2
Query: 50 DIETYCPMYDCDGYGADSPNCLGEDVLDTLVKNNGVAPGAKLAIFDDSQDGWWGYGDLAGNFLWNSTFGTGTKIHSNSWGLYGFCESTEFDFLYDTFMSENPEHLIIFAAGNDGGYKDSPYLSYADCTVASPALGKNILAVGSTSNG 490
DI CP + C G CL +D +TL ++ G+A GAK+A D G + YGDLAGN LW + G KIHSNS+G+ C+ T D LYD +M EN EHL++F+AGN G D CT+ SP + KN+L VGSTS+G
Sbjct: 211 DINRLCPAFGCSG-----DQCLPDDTANTLSEHGGMAQGAKIAAIDIFY-GDYSYGDLAGNGLWETCADAGCKIHSNSYGVDLRCQLTALDVLYDEYMYENQEHLLLFSAGNTGWTTDRD-----TCTIDSPGIAKNVLTVGSTSSG 346
BLAST of mRNA_H-paniculata_contig40207.10415.1 vs. uniprot
Match: A0A2I6U1R2_SACJA (Subtilisin (Fragment) n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A2I6U1R2_SACJA) HSP 1 Score: 122 bits (307), Expect = 2.470e-29 Identity = 72/147 (48.98%), Postives = 85/147 (57.82%), Query Frame = 2
Query: 50 DIETYCPMYDCDGYGADSPNCLGEDVLDTLVKNNGVAPGAKLAIFDDSQDGWWGYGDLAGNFLWNSTFGTGTKIHSNSWGLYGFCESTEFDFLYDTFMSENPEHLIIFAAGNDGGYKDSPYLSYADCTVASPALGKNILAVGSTSNG 490
DI+ CPM DCD A P CL +DV TL + G+A GAKLA FD DG G GN LW G KIHS S G C E D LYD FM NPE+L++ AAGN G +D + CT+ SPA+GKN LAVG+TS+G
Sbjct: 479 DIDRLCPMIDCDD--ATDPRCLSDDVGQTLADHGGMAQGAKLAFFDVFADGSSGT-HFVGNGLWEPCLEAGCKIHSMSIGADFECSVCEKDVLYDDFMYNNPENLVVVAAGNAGDTEDGRTV----CTMYSPAIGKNALAVGATSSG 618 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig40207.10415.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig40207.10415.1 >prot_H-paniculata_contig40207.10415.1 ID=prot_H-paniculata_contig40207.10415.1|Name=mRNA_H-paniculata_contig40207.10415.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=164bp MTPLDAEDYMSNESFDIETYCPMYDCDGYGADSPNCLGEDVLDTLVKNNGback to top mRNA from alignment at H-paniculata_contig40207:274..1323- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig40207.10415.1 ID=mRNA_H-paniculata_contig40207.10415.1|Name=mRNA_H-paniculata_contig40207.10415.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1050bp|location=Sequence derived from alignment at H-paniculata_contig40207:274..1323- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig40207:274..1323- >mRNA_H-paniculata_contig40207.10415.1 ID=mRNA_H-paniculata_contig40207.10415.1|Name=mRNA_H-paniculata_contig40207.10415.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=984bp|location=Sequence derived from alignment at H-paniculata_contig40207:274..1323- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |