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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 75.9 |
| Seed ortholog evalue | 2.7e-11 |
| Seed eggNOG ortholog | 2880.D7FJH8 |
| Hectar predicted targeting category | other localisation |
| EggNOG free text desc. | actin filament network formation |
| EggNOG OGs | COG5069@1,KOG0046@2759 |
| COG Functional cat. | Z |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| Exons | 6 |
| Model size | 2724 |
| Cds size | 660 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4001.10373.1 >prot_H-paniculata_contig4001.10373.1 ID=prot_H-paniculata_contig4001.10373.1|Name=mRNA_H-paniculata_contig4001.10373.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=220bp
MSFNVSTRSQLAQNRADEAYAAVLLQRWRRQLVEARAERDRATREAAKRR
WAARTLHKAYEERWRLKLAERSAIRRDLASKEEEARLLGFGTGKGGGWLY
SLWNELVGGLTGALEGKGHEEEESGSTRHSRRSREGKGKWGSTADGRTGA
YVTELVAGSLCTGEAQEARAKQLARVGTDARFWRSPEDALSPVNCAVMVA
ALVAAAVDATISHAAASGV* back to topmRNA from alignment at H-paniculata_contig4001:2086..9940- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig4001.10373.1 ID=mRNA_H-paniculata_contig4001.10373.1|Name=mRNA_H-paniculata_contig4001.10373.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7855bp|location=Sequence derived from alignment at H-paniculata_contig4001:2086..9940- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGTGAGGGTGGGTGGTGAGGGCAAACAGAGCACCGGTTGGTTTAATAAGG
TGTTCAACGGAATGTCCTTCAACGTGTCCACCAGGTACAAAATAACTGGT
GTATTTAGATAGTATGTGTACGTGTGTGCTCTTTTGCAAAGGATTTTGTT
TTAGTTGTTGTTGTGCTGCAGAGATGCATGTTTATTGTGTTTGTGTTTCT
TTTTCGGGGTTAGTCTTGATATGTTAGTTCAAATACTTTTAGGGCCGTAA
TGCTGTTACAGCCACGGTTATGCCCATCTAGCCACATGCCCATTTGAGGA
AAAGTCATGACTCATTCACATGGACACGCCACGGTCGCACGAATTGTCAA
GATTCATGTTTGAAGATGACTCGAGTACAGCCTTGGAAAACATTCCCGTA
ACGACAATCGCCATCACCACCCCAGCGTATAGTTGGAAAATTAAACATGG
TGGTGCCAGTGACGTTGGCGTTGACTCTTACGTGTAGCATTTCCCGGCTT
TGAGGCAGGATAGGATTGGGTCATTTATATAGAGCTTATAATTGAAACTA
AATACTGGCTTCACAGGTGGCTAAGGTTCCTCTCTTGCGTTCCAAAAGTC
GGTGGCCCTGCGATCCAACGCGGAGCTGCCTTGTACAACTAGGTTACTGA
TACTAGAAGGCAGTGGCATCTCGCAATACTCCCAAGAGAGGAAGTACCAG
CAACCAATATCAATCGTATGTTCGTGCGGAGAGAGGGATGTACACCTTTA
GCGCATCGTGAATCGTCTGTACTAGTAGTGTTACGCCTGCTCCACCGCAC
ACTATTAGCAAATCAGAAGAGTTATGAACCCGTTGGTGATCATTGTTACG
TGGTAAGGGGTGATTGCAATCTCAATCAGTTCATCGTATGGCTCAAAGCA
CAACAGCGGAAGCGTTACAAGTATGTGTAGGATTTAATATTCATTGTGAT
GATAGCCAAACATTCGATTGTGTATGTACATTATCAAAAGAAACGTGGCA
TGAGTGACATAAATTCGATAAATAACCCCCCAACAATACTTCATGTACAA
ATATTGAAACACGGCCTGATATCTACTCGGCACTGAAACGTGACATTAGT
AGTCCGTAACACACACACCACCACCACCACCATAACCACGCATAGATGTT
TTATTGTTAGTTCAAACTACGTTACAAACGCTTTACGGATCGTTTCTTTT
GGATATTATTGCCATATAAACCTTTTTCTCGTTTTGTTTTATTTTTCTTG
TTTTTTTGTTTGCTCTCAGATCACAGCTGGCCCAAAACAGAGCAGACGAG
GCTTATGCAGCGGTGTTACTCCAACGCTGGCGGAGGCAACTTGTCGAGGC
ACGGGCGGAACGTGATCGGGCTACAAGAGAAGCGGCGAAAAGGCGATGGG
CTGCGCGCACTCTGCACAAGGCTTATGAGGAGCGGTGGCGGTTAAAGCTG
GCTGAGCGGAGCGCGATACGGCGAGATCTTGCCTCTAAGGAAGAGGAGGT
GTGTGTGTGTGTGTACGTTGGGCGTGCGTTCGTGTGTGCATTTTTTTTTC
TTGTCAAAAGTTTTTTTTTTTTTTTAGATGTTAGATGTTATTTTAACCGG
AGGTAAAGCACGTACTACATGTCAAATTTCTTTTTTCGTCAGTGTTCAAT
TTTTTTTTTCAGTTGGGTACAGCCGGTGATGGTCATGTCTTGGTCCAAGC
TTTCCTGCTCGTGCGTCCCCCCCTTTTCGGTTTGAACCCTCGAGCTGCCG
TATATATATATGGGGGAAAGTCAGCTGGTCGTGGAGCACGATGACCTGAT
CCCTCTGGAACTCGTTTTGTCCTGAAGATGGTTGTGCTGGTCAACTGTTG
CACGGCACGCGGTCCGTTGTATGTTTCAAGCCTTATCTATTCCATCACGT
TATATATCTTATTTCATAGTGTACACCCCAACCCCTCCTTGTGCGCGTCG
GAAATTCCCCAGTCCTTACCGTATATTGGCCGCGGTGAGAAGGGCTACAT
CATACGTGAATGTAGAGTATGCTTGTAGAAATTTAAGTGTTATAGTCTTG
CACGTACCTAGTTTGCACAACGCAAGATTGATCTGAACCATAGTGACTAT
AGCTTGGACTTATCAGTATTATGACAAACTACGAACTTGCGTCACTGATC
ATTCCTCGACCCCCTGTGACCGAATGAATATCTGTCATTCTGCAGGCACG
TCTTTTGGGTTTCGGAACGGGCAAGGGTGGAGGATGGCTGTACTCGCTCT
GGAACGAGCTTGTCGGGTACGTCTTTAGTTGGTATGCAGAGACAGAAATA
ACGCGAATGCTATCCACTTAACGTCTGATGAAGTCTCAATTTGCCGAGTT
ACTCCCCCCCCCCCCCCCCCCGCAAGTACTTATTGTCTGTCCGGCAGGTG
GTAAAAAGCATGAACGTTGAATTCGACATCAGGATGGGTCTATTTCACCC
GTGTGCGTCGTGTTTCGTCCGTGTGTATGCACGCAGGCGTTCACTAATAT
TTATGCAAAACACAAGTCAGTGTGAAGTATTTTTTGTTTTCCCATGCAGA
AGGGCAGAGAGAGCGTGCTGATGTTGTCGTTTGGTGTTTTCGTGATACGT
GAAGTTTCAGTCGCAGAGACTGACGATCAGACCATACAAGCTCCCTCAGA
GCAAACCGTAGAGGGAGTAGTCATGACGTCACCACATACCGTGGGACAGT
TCAAACGCAGTTTGTTACCAAGTGCAGGAGCATCATCGACGGGAGTTAAA
ATAACATGAACTTTGAACCTCACTGCATAGAAATGTATTCATCGAACGTT
CTCGATGGCTGGAGGGGAGGGGGCGCGGGGGAGGTCTTCTCAGTACTATG
GCCGTGCGCTTGTCATGTTTTCTTTTCAGCCGTGGAAATGATAGTGTTGT
GTATGGGGATATTGACGTGGCCAATGTATCAAAATACTGGCGAGAGCAAA
AAATCAATGCGTTGTCGCCAATGTATTGGCCTGTATTGGTGCGAGCGAGG
CAAGCCGACGAGCGCACAGAGCAACCGAGTGCTCAAGCACGAGCAGCCCC
CGCACCACGGCTGATGAGGGGGCCCCAATTCTCCTGCAACTGCTATTGCG
CTATTGCCGTTTGGCTGCTCTATATTGTATATTCTACGGCACGGTCTGCA
GCACCGCCAAAATAAAATAATATGGCAATGAGTCGATTATATTTTATTGG
AAAATTGCCATATCATGCGGGGAAATATAGCCAATATATTGGTGTCACGA
TTATCCACTGCAACATTTTGTACGATCATTCGTCTGGTTATTTATTCGCG
TCAAAAGAACAGGGTCATTTGCTGAGGACTCCCTCTTAGTGTTAATTTCG
TTAGTGAGCGCTTGTGGTTAGTTTTTTCCATGTTTTTCAAGGCTCCTAAA
GAAAAGCCCCCCTGATTGCTATGACGAGGTGGACTTCCATGCGGATCGAA
ATCGAAATTGAGGTTTGATGATGATGATAATCGCACTATTTCGTTCTACT
ACTAACTATTAACAATACCGAAGTAGGCTACTTGATGCGAAATCATACTT
GAAAAACAGTTTTTACTGTTTTGTAAGAGCGGCCAGCACAAGGGTCACGC
AACAGTCGATACTGGCTGTTTGTATGCACTGACCTACCACCCTATTGCAC
ATTCAGTGAGTATTAGTCACATACATACGATGAAGTGACACAGACAGTAC
AGGCGGCGGTGGGCAGAATGAGTAAAATACTCGACACCTTCGGCGTTGCG
TAGTGCGTGTTACGCCGGTTTGCGCAGAGTCCACTACACAGACGTGCAGT
AGTATAGTCTTGTACGGACATAGTGAGCGGGTAGACCGTACACGTGGTCA
ATGCAGACGTTCTAGGTGCGGTGCCATTGTAGTCAAGGTCCTTGACCCAT
CGTGGTAGATTTGAGTAATGCTCAGCGGCATATGTCTACGTGTATCCTCC
TGCAGGGATCTGTGTACGCTGTGTGTGCAACATGTTGTGGGGAGGTAGCA
CCGCCTAGATACACGCATCCTGAAACGCTAGTTGGTCGCCCAAGGAGCAG
ATCTGACTCTCGATTCGAACACGAAGCCTTGACTAAGTCCTCGCCAGATT
TGGTCACACGCACTGTCAAAACTGCTCGGTCACAAGGCTCTGCATAAATC
AGCTTTTTCGTGATGAACGATTAGAATCCGTGGGAAAAAGTGATCGTGAC
CAACGACTCCGTCCGCATATAAGTCGCTCTAAAAAGCCCTTTACAGAGTT
TGTTCGTGTCCCTTGTGTGCTTGTCTGGGTATGAGGATTATGGAATATAT
ACACTAATGCCCCCTGTCTAGTGCTCATGTCCCCCCTCACTCCCGCCTCT
ATATTGAATTTCCTTCGCAGGGGACTGACAGGCGCTTTGGAGGGCAAAGG
GCACGAAGAGGAAGAGTCTGGGAGCACCAGGCATTCTCGACGTTCTCGAG
AGGTGATTTTACTTGCAAAGATGAAGATTTTCATTGATTTCAATCTGTCC
GCAACAAACAGCCTCGTACGGTACTAATAACGTTTTTTTATTATCGGGAC
CGCGCTGCGGCTGGAACGGGTTGCTGATAAAGGTCATGCTCTAATCAATC
GGTAACGTAGACTGTGGTTGACTCGCCGTCTCGTGTGTTGTGCATCTGTG
TTTCTGAACCTCTATTGATGATAATACAAGAAGGCATGTGCCGTCTTTTT
CGGTACAAAATAGCTGCTGGTATCCAAAGCTTGGACGGTATTACTTGAGC
TTCTGTCGTCGGTGAACCTCTTTTAGGTACGTTTTTGATTGCCACCTTTA
AAGCAAAGGTATTGGTGGTGTCTCGTCTTGCATTTGATCATCTTTGCTTG
CCGCATTCATCTCGATTCGGCCGTTGCAAAGGCAGAGCTTGGGTCAGTGT
TTCGCTAGGTGGTGTCCTACGCATGGCGTTAGAGGTTCAGGGAGTCTCGG
TCACAACCAGAAACCTGGCATCTAAACAAGCACGTTTTCTGCAATCGCGA
TGTGCTAGTAACCCCCCCCCTCCCCCTCCCCTACTCTACTCGGATGCGCT
GACCGTGCCCAACGCGCAAAACTTTTGTAACGAAGGAGTTGAGACAAACA
AAATTCGACTTCTAAAATACAGAACGCTGTGTGCCTTTGATATCCATGTG
ATGATGGGATATGTCCATGCAGGGCAAAGGCAAATGGGGGTCCACAGCAG
ACGGTCGGACGGGAGCGTACGTGACCGAACTGGTGGCGGGTTCGCTTTGT
ACCGGAGAGGCTCAGGAGGCTCGGGCGAAGCAGCTCGCGCGCGTAGGCAC
TGACGGTGAGCGAACGGATAGGCCTCCAACCTCATGACGTCAAGATTGCC
CCCGAAGTGTTTTTGCGGTTTTTTTTTTCTCATGTCCCGAGTGGGATTCT
TGAGACAACTATAGCTATGGATGGCTCCAACTGCTGTAATAAACGTATTG
CTGTGGCCTCTGAGTGCACCTTTCAATATGGTAATGACTGTCATGTACGT
ACAAGATAGTACTAAAATTGGTCGTGTAAGGGAGATACAGAGAGAGAGAG
AGAGAGAGAGAGGGAGGGAGAGGAAGATCACTATTGCGTTTGAGCACAAT
ATCCAAAGCTGTGCACCAGGACTCTCCCAATACACCGGATTTTTGCAATG
CAACCAATCCTGTGTGCATCTCCCACTATTGATTTAATATGTGCCCTGCC
GGCCCCCCTTGCCCCCACCTTGGTATTCAGCCCGTTTTTGGAGATCGCCC
GAGGATGCGCTATCTCCGGTCAACTGTGCCGTCATGGTGGCTGCTCTAGT
AGCCGCGGCAGTGGATGCTACGATCTCCCATGCTGCCGCATCCGGAGTTT
GAGCTGACCTCACCCCCACCCTGACCCCCGTTGGAGGTAGTATTGGGGTG
GAAAGATAACTTCGAGGGGCGAGTTGCTCGCCTCTGATGTTTTGTGCCTG
GCTATCTCTCACGAGGCGCTTGTCATGCCATTCCCCTCGCATGATGAAGT
CATTGTGCGTGGGGGGGCTTTATAGATGTGCGTCAAGTGGAAACGCTGTT
GGGGTAGGCTAGATGGTATTGTACGAAACGCGCTTTATGTGTTGCCTCTC
TTCCCCCTCTTCCCTTGTTCCTCCCTTTGATACCGAGAATTCCTTTGTGT
GTGCCTCTTATCTCGAGTTTTTTTGTCCAGAAAGGCACTGAGAAATACTG
CTTTCCCCCTTTTGCACGTATGACTCGTTTCGCTCTTCACTTGAATGAAG
TGGGTCGTACGTGTTGACCTCTATCTGGGTGTTTCAGTAGCGGGTATTTT
TGAGATAAAAAGTGGTTGGTATGCATGGGGGCGGGAATAAAAGAATACAT
TAACGGCATGAGTAGGTAGAAGTAAGATCAAAGTGATCACATCACAGGAA
AGGGCTTGCGAAGATGGTCCGGATGTTTGATGGAAAAAGGTGGAAATGTG
TTATGTGTGCGTGAGTGTTTGTGCGTGCACTGTGACGGAGCGATATAACG
GAACCACTGGCGATTGGATGTTTGGGGTCCGGCTCGTTTCGATGGCCTGA
TCGAGGAAAGGGACGATTGATGTTTGCAGTTGTAGACGATGGAGAGTTTT
TGCTTTTGGCGCACGAATCAACCCGGAACGTTTTTACCGTAGAGTAGGTG
TAGTGAATGAATGTGGATGTTGTGTAATTTTCATCGCAAGTTTTTTTTTT
TTTTTTTGTTGCGCTTTATTACTTTTTAGTTACGTCGCTTTCCTTGACTT
TTCACTTGTAGTGGGTGCACACTTTGATAGGAGGGTGGAATAAATAAATT
TACGAGCTGACGCGGACAAATTCGTTGAGTTGCACTAGGCAGGGGGTAAA
GCCCTGCGGGACGTCGAGTTTGTGCAACGAGAGAGAGGTGATACTGAGTC
GATGACGGGCCAGTTGAAAGAGCTTGTCTCAAACGTAAACTGCTTTGGGC
ACAGCGGTATACGACACCTGGCTTTGACCGAAATCATAGACTCGGGGCGC
CAAGTATTGTCGTTGTCGCTTGTCTGGGTGACTTGAGTTACTACTGTAAA
ATGGGACGGGAAGGTAAGGGTTGGAGGTTGGAGAGCGGGGGTCACACATC
CCTAGATTTCTCCGAGGAATTGGCCGGGTATCACAAGAAGAGTTGGCCAG
CACAGAGGAATACCCGTCGTAGAGAAGAAGCAGGAAAGTTGCTTGGGGGT
GTGTGGAATGATGTACGAAGCGTAGCTCTGTTTCAAAGGTGTTCGGAAAG
ACGCCGGCCCCTGTGTTTGCGTGTCTTGGTGTGCGCAGCTTTATCCGTAT
GGTATCGACATGTTTCGCACGCCCGCTGTGCATCACTGCTCTCAAAGACC
TCCCCGATGCCCATGGCCATGTACATACGGAGGCTACAGAGGCCGGAACA
GAGGAGTGCATTCGTTTTTGTTTGTTTCCTGGGTTTATTTGTTACCCTAA
AAATTGATATAAAAATAGACCTATGCTGCTTGTAGTGGTGTCGGCGGGGG
AAGATGAGTTCTGGAACGGACGCTTGCCTCAGTCGTTTGAATAGCACACC
ATACAAAATATAAAAAGGGCAGCACGCTTTTCTTTCAATCGTGAGTTATT
GAGTACACATCGAGAGGACAGAACACTCGTTTTCTTCTGTTGCCATGAAG
CTCGGGTTGGTCGACGCGATGTGATGAGCACGTTGTCAGAGTGGCCTTGC
CCATCAACAAGTCAAGATGGATCCATTAGTGTACTTGGAGTATGAGCACA
TCATGGACAGACACGGATGGACATTAAGAGTCACGAGTCAGCACGTGTTG
CTGAGCAAGATTTAATATAATGTGTTGACTAGACAAGGAACAAAGAAAAT
TGAAC back to topCoding sequence (CDS) from alignment at H-paniculata_contig4001:2086..9940- >mRNA_H-paniculata_contig4001.10373.1 ID=mRNA_H-paniculata_contig4001.10373.1|Name=mRNA_H-paniculata_contig4001.10373.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1320bp|location=Sequence derived from alignment at H-paniculata_contig4001:2086..9940- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCCTTCAACGTGTCCACCAGATGTCCTTCAACGTGTCCACCAGATCA
CAGCTGGCCCAAAACAGAGCAGACGAGGCTTATGCAGCGGTGTTACTCCA
ACGCTGGCGGAGGCAACTTGTCGAGGCACGGGCGGAACGTGATCGGGCTA
CAAGAGAAGCGGCGAAAAGGCGATGGGCTGCGCGCACTCTGCACAAGGCT
TATGAGGAGCGGTGGCGGTTAAAGCTGGCTGAGCGGAGCGCGATACGGCG
AGATCTTGCCTCTAAGGAAGAGGAGATCACAGCTGGCCCAAAACAGAGCA
GACGAGGCTTATGCAGCGGTGTTACTCCAACGCTGGCGGAGGCAACTTGT
CGAGGCACGGGCGGAACGTGATCGGGCTACAAGAGAAGCGGCGAAAAGGC
GATGGGCTGCGCGCACTCTGCACAAGGCTTATGAGGAGCGGTGGCGGTTA
AAGCTGGCTGAGCGGAGCGCGATACGGCGAGATCTTGCCTCTAAGGAAGA
GGAGGCACGTCTTTTGGGTTTCGGAACGGGCAAGGGTGGAGGATGGCTGT
ACTCGCTCTGGAACGAGCTTGTCGGGCACGTCTTTTGGGTTTCGGAACGG
GCAAGGGTGGAGGATGGCTGTACTCGCTCTGGAACGAGCTTGTCGGGGGA
CTGACAGGCGCTTTGGAGGGCAAAGGGCACGAAGAGGAAGAGTCTGGGAG
CACCAGGCATTCTCGACGTTCTCGAGAGGGGACTGACAGGCGCTTTGGAG
GGCAAAGGGCACGAAGAGGAAGAGTCTGGGAGCACCAGGCATTCTCGACG
TTCTCGAGAGGGCAAAGGCAAATGGGGGTCCACAGCAGACGGTCGGACGG
GAGCGTACGTGACCGAACTGGTGGCGGGTTCGCTTTGTACCGGAGAGGCT
CAGGAGGCTCGGGCGAAGCAGCTCGCGCGCGTAGGCACTGACGGGCAAAG
GCAAATGGGGGTCCACAGCAGACGGTCGGACGGGAGCGTACGTGACCGAA
CTGGTGGCGGGTTCGCTTTGTACCGGAGAGGCTCAGGAGGCTCGGGCGAA
GCAGCTCGCGCGCGTAGGCACTGACGCCCGTTTTTGGAGATCGCCCGAGG
ATGCGCTATCTCCGGTCAACTGTGCCGTCATGGTGGCTGCTCTAGTAGCC
GCGGCAGTGGATGCTACGATCTCCCATGCTGCCGCATCCGGAGTTTGACC
CGTTTTTGGAGATCGCCCGAGGATGCGCTATCTCCGGTCAACTGTGCCGT
CATGGTGGCTGCTCTAGTAGCCGCGGCAGTGGATGCTACGATCTCCCATG
CTGCCGCATCCGGAGTTTGA back to top
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