mRNA_H-paniculata_contig400.10370.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig400.10370.1 vs. uniprot
Match: A0A6H5KXT6_9PHAE (START domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXT6_9PHAE) HSP 1 Score: 384 bits (986), Expect = 2.000e-123 Identity = 185/269 (68.77%), Postives = 219/269 (81.41%), Query Frame = 3
Query: 411 VLIVLSLLASTQAGFFKRRRAMAK------GTSSGST-RAEAKEKVKENVSWLLEDNSDGGWKRVSDDGHVKVWKREVPGSAFVAIKSSARLTATPQALFEVLTPGDIEIVRQYNPLVEDGRDIEVLDRDNKVSWSATMAIWPCKGRDFVTHIRRARLDDGSVAIVNSATTHHEAPESSKYVRGEILHGVFLIKASKDKKHSEFTMLHHFNPGGSIPAWLMNWLAEGKPSSFVQRLEEVAKKWDLEAGRVKNMPCKGRGFGDRPCSFLL 1196
++++L+++ T A FKR+R +K G G + + KVKE+V+WLLED SDGGWK V DDGHV+VWKR +P S FVAIKS A L +PQALFEVLTPGDIEIVRQYNPLVEDG D+EV+DRDNKVSWSATM IWPC+ RDFVTHI+RA L+DGSVAIVNSAT+H +AP KYVRGEILHGVF IKA+K+KKHSEFTM+HHF+PGG+IP WLMNWLAEGKP +FV++LEEVAKKWD +A K+MPCKGRGF D+PC FLL
Sbjct: 22 LVLLLTVMGPTGASLFKRKRTNSKEVHPSGGVPFGKGGKXXXRGKVKEDVAWLLEDTSDGGWKPVRDDGHVQVWKRSMPNSDFVAIKSKASLAVSPQALFEVLTPGDIEIVRQYNPLVEDGIDLEVIDRDNKVSWSATMGIWPCRPRDFVTHIQRATLEDGSVAIVNSATSHPKAPVGEKYVRGEILHGVFHIKAAKNKKHSEFTMVHHFSPGGNIPPWLMNWLAEGKPITFVRKLEEVAKKWDQQAALTKSMPCKGRGFADKPCDFLL 290
BLAST of mRNA_H-paniculata_contig400.10370.1 vs. uniprot
Match: D7G7Z6_ECTSI (START domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7Z6_ECTSI) HSP 1 Score: 382 bits (981), Expect = 6.290e-123 Identity = 184/256 (71.88%), Postives = 212/256 (82.81%), Query Frame = 3
Query: 441 TQAGFFKRRRAMAKGTS-SGST---RAEAKEKVKENVSWLLEDNSDGGWKRVSDDGHVKVWKREVPGSAFVAIKSSARLTATPQALFEVLTPGDIEIVRQYNPLVEDGRDIEVLDRDNKVSWSATMAIWPCKGRDFVTHIRRARLDDGSVAIVNSATTHHEAPESSKYVRGEILHGVFLIKASKDKKHSEFTMLHHFNPGGSIPAWLMNWLAEGKPSSFVQRLEEVAKKWDLEAGRVKNMPCKGRGFGDRPCSFLL 1196
T A FKR+R +K SG + + KVKE+V+WLLED SDGGWK V DDGHV+VWKR +P S FVAIKS A L +PQALFEVLTPGDIEIVRQYNPLVEDG D+EV+DRDNKVSWSATM IWPC+ RDFVTHI+RA L+DGSVAIVNSAT+H +AP KYVRGEILHGVF IKA+K+KKHSEFTM+HHF+PGG+IP WLMNWLAEGKP +FV++LEEVAKKWD +A K+MPCKGRGF D+PC+FLL
Sbjct: 4 TGASLFKRKRTNSKEVQPSGGVPFGKGGKRGKVKEDVAWLLEDTSDGGWKPVRDDGHVQVWKRSMPNSDFVAIKSKASLAVSPQALFEVLTPGDIEIVRQYNPLVEDGIDLEVIDRDNKVSWSATMGIWPCRPRDFVTHIQRATLEDGSVAIVNSATSHPKAPAGGKYVRGEILHGVFHIKAAKNKKHSEFTMVHHFSPGGNIPPWLMNWLAEGKPITFVRKLEEVAKKWDRQAALTKSMPCKGRGFADKPCAFLL 259
BLAST of mRNA_H-paniculata_contig400.10370.1 vs. uniprot
Match: A0A835YMA7_9STRA (START domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMA7_9STRA) HSP 1 Score: 226 bits (577), Expect = 5.810e-64 Identity = 127/283 (44.88%), Postives = 175/283 (61.84%), Query Frame = 3
Query: 399 RAVYVLIVLSLLASTQAGFFKRRRAMAKGTSSGSTRAEAKEKVKENVSWLLEDNSDGGWKRVSDDGHVKVWKREVPGSAFVAIKSSARLTATPQALFEVLTPGDIEIVRQYNPLVEDGRDIEVLDRDNKVSWSATMAIWPCKGRDFVTHIRRARLDDGSVAIVNSATTHHEAPESSK---YVRGEILHGVFLIKASKDKKH-SEFTMLHHFNPGGSIPAWLMNWLAEGKPSSFVQRLEEVAKKWDLEAGRVKNM-------------PCKGRGFGDRPCSFLL 1196
RA +L+VL L++S +A + +R+ + K T + A E +K+ + WLL + + GW+ V D G +VWK +P SAF+ +K+ A + A+P AL EVL PG+++IV+ YNP++ +GRDIE L RD+K+SWS+TM +WPC+GRDFVT I R RL DG AI+ ATTH + P VR EILHG+FL++ + H S+FTM+ H NPGG IPAWL N LA P+SFV L VA+++D A N PC RGF PC +LL
Sbjct: 6 RACVLLVVLLLVSSVEA--WPKRKHVDKDTKQRNQALSA-EALKD-MEWLL--SGELGWEPVLD-GETQVWKMTMPDSAFIFVKAMATIDASPVALREVLAPGELDIVKMYNPVITEGRDIEYLGRDSKISWSSTMPMWPCRGRDFVTFINRIRLPDGGTAIIQKATTHPQYPAPGPGYDTVRAEILHGLFLVQPVPGESHRSQFTMVQHLNPGGKIPAWLTNQLAARTPASFVTALGRVAQRFDAVAAATANDATTTKGSKGSRSGPCFDRGFDSPPCPWLL 281
BLAST of mRNA_H-paniculata_contig400.10370.1 vs. uniprot
Match: A0A7S0I3S0_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0I3S0_9CRYP) HSP 1 Score: 112 bits (280), Expect = 1.290e-22 Identity = 71/231 (30.74%), Postives = 109/231 (47.19%), Query Frame = 3
Query: 561 SDGGWKRVSDDGHVKVWKREVPGSAFVA------------IKSSARLTATPQALFEVLTPGDIEIVRQYNPLVEDGRDIEVLDRDNKVSWSATMAIWPCKGRDFVTHIRRARLDDGSVAIVNSATTHHEAPESSKYVRGEILHGVFLIK------ASKDKKHSEFTMLHHFNPGG----SIPAWLMNWLAEGKPSSFVQRLEEVAKKWDLEAGRVKNMPCKGRGFGDRPCS 1187
S+ W ++SD +KVW+ +P S VA + SS L A P+ ++ D V +YN + +D+E LD + K++WSA+ + P K RDFVT + DGS+ I N A TH APE+ +++R EI+ G +++ S D + T+L H NPGG + ++N A P F+Q L + V++ G GDR S
Sbjct: 381 SEASWTQISDSDGIKVWRTMLPDSLLVAGRPLGPSAKFYCVMSSGVLDAPPEQVYTYFV--DNSRVHEYNEFCKQVKDLEYLDANTKITWSASGRVGPFKERDFVTRVHYRTAPDGSLIIANRAETHPTAPETDRFLRMEIMIGGNVLRPVREEDGSLDHSRTNITVLTHVNPGGIAETRLGTMILNSAAASGPIKFIQGLRQCI---------VRDRSNSGAALGDREDS 600
BLAST of mRNA_H-paniculata_contig400.10370.1 vs. uniprot
Match: A0A7S4NFJ2_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4NFJ2_GUITH) HSP 1 Score: 107 bits (266), Expect = 2.270e-22 Identity = 67/230 (29.13%), Postives = 108/230 (46.96%), Query Frame = 3
Query: 564 DGGWKRVSDDGHVKVWKREVPGSA------------FVAIKSSARLTATPQALFEVLTPGDIEIVRQYNPLVEDGRDIEVLDRDNKVSWSATMAIWPCKGRDFVTHIRRARLDDGSVAIVNSATTHHEAPESSKYVRGEILHGVFLIKASK------DKKHSEFTMLHHFNPGG----SIPAWLMNWLAEGKPSSFVQRLEEVAKKWDLEAGRVKNMPCKGRGFGDRPCS 1187
+ W ++SD +KVW+ +P S F + SS L A P+ ++ D V +YN + +D+E LD + K++WSA+ + P K RDFVT + DGS+ I N A H +APE+ +++R EI+ G +++ ++ D + T+L H NPGG + ++N A P F+Q L + V++ G GDR S
Sbjct: 23 EASWTQISDSDGIKVWRTMLPESLQIAGRPLGPSAKFFCVMSSGILDAPPEQVYTYFV--DNSRVHEYNEFCKQVKDLEYLDANTKITWSASGRVGPFKERDFVTRVHYRTASDGSLIIANRAEKHPKAPETERFLRMEIMIGGNVLRPAREADGSLDHSRTNITVLTHVNPGGIAETRLGTMILNSAAASGPIKFIQGLRQCI---------VRDRSNGGASVGDREDS 241
BLAST of mRNA_H-paniculata_contig400.10370.1 vs. uniprot
Match: A0A7S4K5H3_GUITH (Hypothetical protein (Fragment) n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4K5H3_GUITH) HSP 1 Score: 90.5 bits (223), Expect = 1.770e-17 Identity = 47/152 (30.92%), Postives = 80/152 (52.63%), Query Frame = 3
Query: 564 DGGWKRVSDDGHVKVWKREVPGSA------------FVAIKSSARLTATPQALFEVLTPGDIEIVRQYNPLVEDGRDIEVLDRDNKVSWSATMAIWPCKGRDFVTHIRRARLDDGSVAIVNSATTHHEAPESSKYVRGEILHGVFLIKASKD 983
+ W ++SD +KVW+ +P S F + SS L A P+ ++ D V +YN + +D+E LD + K++WSA+ + P K RDFVT + DGS+ I N A H +APE+ +++R EI+ G +++ +++
Sbjct: 23 EASWTQISDSDGIKVWRTMLPESLQIAGRPLGPSAKFFCVMSSGILDAPPEQVYTYFV--DNSRVHEYNEFCKQVKDLEYLDANTKITWSASGRVGPFKERDFVTRVHYRTASDGSLIIANRAEKHPKAPETERFLRMEIMIGGNVLRPARE 172
BLAST of mRNA_H-paniculata_contig400.10370.1 vs. uniprot
Match: A0A7S4G648_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4G648_9EUGL) HSP 1 Score: 87.0 bits (214), Expect = 4.020e-16 Identity = 50/177 (28.25%), Postives = 91/177 (51.41%), Query Frame = 3
Query: 600 VKVWKREVPGSAFVAIKSSARLTATPQALFEVLTPGDIEIVRQYNPLVEDGRDIEVLDRDNKVSWSATMAIWP-CKGRDFVTHIRRAR----LDDGSVAIVNSATTHHEAPESSKYVRGEILHGVFLIKASKDK-KHSEFTMLHHFNPGGSIPAWLMNWLAEGKPSSFVQRLEEVAK 1112
V++W+R + GS + ++ S + P+ + + D+ ++R +NP + G D+E KV+++ + +P + RD VT + + L G+V ++ A H + P + YVR + L G+ L++ K + EFT +PGG+IPAW+MN L + F R+ A+
Sbjct: 16 VRIWRRSLAGSDWDEVRGSGVIHCRPETVVALFETSDVPLIRSFNPCYDTGHDVECYSPAAKVAYARLKSAFPGFRPRDTVTAVEQHNVLPALGGGTVFLLK-AFDHPDVPPAPGYVRAK-LSGLNLVQPIPGKPEQCEFTFTQLVDPGGAIPAWIMNMLVSREAVDFFARIRRAAQ 190
BLAST of mRNA_H-paniculata_contig400.10370.1 vs. uniprot
Match: A0A4Y3HXM0_9VIBR (START domain-containing protein n=2 Tax=Vibrio TaxID=662 RepID=A0A4Y3HXM0_9VIBR) HSP 1 Score: 81.3 bits (199), Expect = 7.200e-14 Identity = 48/181 (26.52%), Postives = 84/181 (46.41%), Query Frame = 3
Query: 573 WKRVSDDGHVKVWKREVPGSAFVAIKSSARLTATPQALFEVLTPGDIEIVRQYNPLVEDGRDIEVLDRDNKVSWSATMAIWPCKGRDFVTHIRRARLDDGSVAIVNSATTHHEAPESSKYVRGEILHGVFLIKASKDKKHSEFTMLHHFNPGGSIPAWLMNWLAEGKPSSFVQRLEEVAKK 1115
WK V + + V+ R + GS+F A ++ + + L V D+E+ + V++ R ++ + V+++ T A WP RD V H ++ D + E P + VR E LH ++ + + + T PGGS+PAWL+N +A +P Q L E+++K
Sbjct: 25 WKEVKNSHGITVYNRSIEGSSFKAFRAEMTIESDLTTLMAVFN--DVEVGTTWVENVDEMRLVKANSNMDNVTYAMTKAPWPVADRDSVVHNHISQNPDTLAVTIKQEAVPDEVPRTKNKVRIETLHSTWVFTPISETQ-TRVTYQVFTEPGGSLPAWLVNKVAISQPYKTFQGLREMSQK 202
BLAST of mRNA_H-paniculata_contig400.10370.1 vs. uniprot
Match: UPI00187E0AD5 (START domain-containing protein n=1 Tax=Mucilaginibacter myungsuensis TaxID=649104 RepID=UPI00187E0AD5) HSP 1 Score: 79.7 bits (195), Expect = 2.090e-13 Identity = 53/182 (29.12%), Postives = 83/182 (45.60%), Query Frame = 3
Query: 573 WKRVSDDGHVKVWKREVPGSAFVAIKSSARLTATPQALFEVLTPGDIEIVRQYNPLVEDGRDIEVLDRDNKVSWSATMAIWPCKGRDFVTHIRRARLDDGSVAIVNSATTHHEAPESSKYVRGEILHGVFLIKA-SKDKKHSEFTMLHHFNPGGSIPAWLMNWLAEGKPSSFVQRLEEVAKK 1115
WK +D +K++ EV GS AIK L AT L VL + + Y + + I + ++ WP + RD+V H+ + D V +++ P VR E G ++I S DK H +T+ +PGG+IPAWL+N A P++ ++L+E KK
Sbjct: 22 WKLTTDADGMKIYMAEVAGSKIKAIKVELELNATQSQLVAVLMDANTCVEWVYG--FKSSKLIRQVSPSESYYYAEVNLPWPAENRDYVAHLTATQNPDTKVVTIDAPAVLGFVPIKKGIVRVERSVGKWVISPLSADKIHVVYTL--QLDPGGNIPAWLVNTFATQAPTNSFKKLKEQLKK 199
BLAST of mRNA_H-paniculata_contig400.10370.1 vs. uniprot
Match: A0A081PH56_9SPHI (Lipid-binding protein n=2 Tax=Pedobacter antarcticus TaxID=34086 RepID=A0A081PH56_9SPHI) HSP 1 Score: 79.3 bits (194), Expect = 2.950e-13 Identity = 47/182 (25.82%), Postives = 83/182 (45.60%), Query Frame = 3
Query: 573 WKRVSDDGHVKVWKREVPGSAFVAIKSSARLTATPQALFEVLTPGDIEIVRQYNPLVEDGRDIEVLDRDNKVSWSATMAIWPCKGRDFVTHIRRARLDDGSVAIVNSATTHHEAPESSKYVRGEILHGVFLI-KASKDKKHSEFTMLHHFNPGGSIPAWLMNWLAEGKPSSFVQRLEEVAKK 1115
WK D +K++ + GS A+K + A P L +L DI+ ++ + + ++ + +S + WP + RDF+ H+ + + + V+ PE VR + G ++I A KDK +T+ H +PGG++PAWL+N A PS ++L+ K
Sbjct: 24 WKLEKDKNDIKIYTSALTGSKVKAVKVECEIQARPSQLVALLL--DIDAAPEWVYHTKSAKLVKRVSPSELYYYSEVILPWPVQNRDFIAHLTVTQDQESRIVTVDGPAVSGFVPEKKGIVRIDNSKGKWIIIPAGKDKVRISYTL--HVDPGGTLPAWLVNMFAAEGPSHIFEQLKLQVSK 201 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig400.10370.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig400.10370.1 >prot_H-paniculata_contig400.10370.1 ID=prot_H-paniculata_contig400.10370.1|Name=mRNA_H-paniculata_contig400.10370.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=416bp MTTTVLARPTRRKALFKGSSGFGGGRGRARPAVTGRAVYVLIVLSLLASTback to top mRNA from alignment at H-paniculata_contig400:13391..23937+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig400.10370.1 ID=mRNA_H-paniculata_contig400.10370.1|Name=mRNA_H-paniculata_contig400.10370.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10547bp|location=Sequence derived from alignment at H-paniculata_contig400:13391..23937+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig400:13391..23937+ >mRNA_H-paniculata_contig400.10370.1 ID=mRNA_H-paniculata_contig400.10370.1|Name=mRNA_H-paniculata_contig400.10370.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2496bp|location=Sequence derived from alignment at H-paniculata_contig400:13391..23937+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |