mRNA_H-paniculata_contig3984.10329.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3984.10329.1 vs. uniprot
Match: A0A126WZ78_9PHAE (Putative LOV domain-containing protein n=1 Tax=Dictyopteris undulata TaxID=156997 RepID=A0A126WZ78_9PHAE) HSP 1 Score: 338 bits (866), Expect = 1.400e-113 Identity = 164/189 (86.77%), Postives = 175/189 (92.59%), Query Frame = 1
Query: 1 QAENDSLKGSIIDSLGDRGRVLVAKCVPDDMGGLVTANPSQATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFASGGFLELTGYKLKEVLGRNCRFLQGPETDPRAVDKIRKAIEEGADTSVCLLNYRADMTTFWNQFFVAALRDSEGTTVNYVGVQCKVGDDYARLVVGEQNRQLAAPTAERR 567
QAENDSLKGSI+ SLGDRGR LVA+C P+D+GG++TANP+QATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFAS GFLELTGYKL EVLGRNCRFLQGPETDPRAVDKIRKAIEE AD SVCLLNYRADMTTFWNQFFVAALRD +G TVNYVGVQCKVGDDYAR+VV EQN+QLA P+ R
Sbjct: 108 QAENDSLKGSIVQSLGDRGRTLVAECAPEDVGGIITANPTQATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFASRGFLELTGYKLSEVLGRNCRFLQGPETDPRAVDKIRKAIEESADASVCLLNYRADMTTFWNQFFVAALRDGDGKTVNYVGVQCKVGDDYARIVVSEQNKQLAGPSGSAR 296
BLAST of mRNA_H-paniculata_contig3984.10329.1 vs. uniprot
Match: A0A126WXQ5_9PHAE (Putative LOV domain-containing protein n=1 Tax=Desmarestia viridis TaxID=62313 RepID=A0A126WXQ5_9PHAE) HSP 1 Score: 329 bits (844), Expect = 1.320e-110 Identity = 173/215 (80.47%), Postives = 185/215 (86.05%), Query Frame = 1
Query: 1 QAENDSLKGSIIDSLGDRGRVLVAKCVPDDMGG-LVTANPSQATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFASGGFLELTGYKLKEVLGRNCRFLQGPETDPRAVDKIRKAIEEGADTSVCLLNYRADMTTFWNQFFVAALRDSEGTTVNYVGVQCKVGDDYARLVVGEQNRQLAAPTAERRDASAPAPSRARLSGSPSPRGPPGEA 642
QAENDSLKGSI+ SLG RGR LVAKCVP+D G LVTANP+QATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFASGGFLELTGYKL +VLGRNCRFLQGPETDPRAVDKIR AIEEG+D SVCLLNYRAD TTFWNQFFVAALRD G TVNYVGVQCKVGDDYAR+VV EQNR+L+AP+A R+ P P+R G+ P PP A
Sbjct: 76 QAENDSLKGSIVSSLGGRGRELVAKCVPEDAEGPLVTANPTQATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFASGGFLELTGYKLMDVLGRNCRFLQGPETDPRAVDKIRNAIEEGSDASVCLLNYRADNTTFWNQFFVAALRDGAGATVNYVGVQCKVGDDYARIVVSEQNRKLSAPSAGRQG---PPPAR----GNKQPSIPPSPA 283
BLAST of mRNA_H-paniculata_contig3984.10329.1 vs. uniprot
Match: A0A126WV07_9PHAE (Putative LOV domain-containing protein n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A126WV07_9PHAE) HSP 1 Score: 328 bits (842), Expect = 1.850e-106 Identity = 163/192 (84.90%), Postives = 175/192 (91.15%), Query Frame = 1
Query: 1 QAENDSLKGSIIDSLGDRGRVLVAKCVPDDMGGLVTANPSQATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFASGGFLELTGYKLKEVLGRNCRFLQGPETDPRAVDKIRKAIEEGADTSVCLLNYRADMTTFWNQFFVAALRDSEGTTVNYVGVQCKVGDDYARLVVGEQNRQLAAPT-AERRDA 573
Q ENDSLKGSI++SLGDRGR LVAKCVP++ GL+TANP QATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFAS GFLELTGYKL EVLGRNCRFLQGP TDP+AVDKIRKAIE+ +DTSVCLLNYRAD TTFWNQFFVA+LRD +G TVNYVGVQCKVGDDYAR+VVGEQNRQL+ P A RR A
Sbjct: 378 QVENDSLKGSIVESLGDRGRELVAKCVPEEAEGLITANPKQATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFASSGFLELTGYKLNEVLGRNCRFLQGPATDPKAVDKIRKAIEDKSDTSVCLLNYRADGTTFWNQFFVASLRDGDGNTVNYVGVQCKVGDDYARIVVGEQNRQLSTPAPASRRGA 569
BLAST of mRNA_H-paniculata_contig3984.10329.1 vs. uniprot
Match: A0A126X2D5_9PHAE (Putative LOV domain-containing protein n=1 Tax=Scytosiphon dotyi TaxID=180438 RepID=A0A126X2D5_9PHAE) HSP 1 Score: 327 bits (838), Expect = 1.130e-105 Identity = 164/187 (87.70%), Postives = 174/187 (93.05%), Query Frame = 1
Query: 1 QAENDSLKGSIIDSLGDRGRVLVAKCVPDDMGG-LVTANPSQATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFASGGFLELTGYKLKEVLGRNCRFLQGPETDPRAVDKIRKAIEEGADTSVCLLNYRADMTTFWNQFFVAALRDSEGTTVNYVGVQCKVGDDYARLVVGEQNRQLAAPTA 558
QAENDSLKGSI+ SLG+RGR LVAKCVP D GG LVTANP QATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFASGGFLELT YKL EVLGRNCRFLQGPETDP+AVDKIRKAI+EG DTSVCLLNYRAD TTFWNQFFVA+LRD +G TVNYVGVQCKVGDDYA++VV EQNRQLA+P+A
Sbjct: 380 QAENDSLKGSIVGSLGERGRELVAKCVPADTGGSLVTANPKQATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFASGGFLELTRYKLTEVLGRNCRFLQGPETDPKAVDKIRKAIDEGYDTSVCLLNYRADGTTFWNQFFVASLRDGKGDTVNYVGVQCKVGDDYAKIVVTEQNRQLASPSA 566
BLAST of mRNA_H-paniculata_contig3984.10329.1 vs. uniprot
Match: A0A126WYY7_SARFS (Putative LOV domain-containing protein n=1 Tax=Sargassum fusiforme TaxID=590727 RepID=A0A126WYY7_SARFS) HSP 1 Score: 306 bits (785), Expect = 3.560e-101 Identity = 156/183 (85.25%), Postives = 162/183 (88.52%), Query Frame = 1
Query: 1 QAENDSLKGSIIDSLGDRGRVLVAKCVPDDMGG-LVTANPSQATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFASGGFLELTGYKLKEVLGRNCRFLQGPETDPRAVDKIRKAIEEGADTSVCLLNYRADMTTFWNQFFVAALRDSEGTTVNYVGVQCKVGDDYARLVVGEQNRQLA 546
QAEN+SLKGSII SLG GR LVAKC P+D LVTANP+QATKILDDPDYSLVKALQTAQQNFVITDAS PDNPIVFAS GFLELT YKL EVLGRNCRFLQGPETDPRAVDKIR AI+EG DTSVCLLNYRAD TTFWNQFFVAALRD EG TVNYVGVQCKVGDDYAR+VV Q +QLA
Sbjct: 94 QAENESLKGSIIGSLGQHGRELVAKCSPEDAESTLVTANPTQATKILDDPDYSLVKALQTAQQNFVITDASPPDNPIVFASNGFLELTRYKLNEVLGRNCRFLQGPETDPRAVDKIRTAIDEGYDTSVCLLNYRADDTTFWNQFFVAALRDGEGNTVNYVGVQCKVGDDYARIVVNAQKKQLA 276
BLAST of mRNA_H-paniculata_contig3984.10329.1 vs. uniprot
Match: A0A126X4A7_9PHAE (Putative LOV domain-containing protein n=1 Tax=Sargassum thunbergii TaxID=127542 RepID=A0A126X4A7_9PHAE) HSP 1 Score: 308 bits (790), Expect = 1.000e-100 Identity = 156/183 (85.25%), Postives = 163/183 (89.07%), Query Frame = 1
Query: 1 QAENDSLKGSIIDSLGDRGRVLVAKCVPDDMGG-LVTANPSQATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFASGGFLELTGYKLKEVLGRNCRFLQGPETDPRAVDKIRKAIEEGADTSVCLLNYRADMTTFWNQFFVAALRDSEGTTVNYVGVQCKVGDDYARLVVGEQNRQLA 546
QAEN+SLKGSII SLG RGR LVAKC P+D LVTANP+QATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFAS GFLELT YKL EVLGRNCRFLQGPETDPRAVDKIR AI+EG DTSVCLLNYRAD TTFWNQFFVAALRD +G TVNYVGVQCKVGDDYAR+VV Q +Q A
Sbjct: 186 QAENESLKGSIIGSLGQRGRELVAKCSPEDAESTLVTANPTQATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFASNGFLELTRYKLNEVLGRNCRFLQGPETDPRAVDKIRTAIDEGYDTSVCLLNYRADGTTFWNQFFVAALRDGDGNTVNYVGVQCKVGDDYARIVVNAQKKQFA 368
BLAST of mRNA_H-paniculata_contig3984.10329.1 vs. uniprot
Match: A0A126X308_SARHM (Putative LOV domain-containing protein n=2 Tax=Sargassum TaxID=3015 RepID=A0A126X308_SARHM) HSP 1 Score: 311 bits (797), Expect = 2.520e-99 Identity = 158/183 (86.34%), Postives = 164/183 (89.62%), Query Frame = 1
Query: 1 QAENDSLKGSIIDSLGDRGRVLVAKCVPDDMGG-LVTANPSQATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFASGGFLELTGYKLKEVLGRNCRFLQGPETDPRAVDKIRKAIEEGADTSVCLLNYRADMTTFWNQFFVAALRDSEGTTVNYVGVQCKVGDDYARLVVGEQNRQLA 546
QAEN+SLKGSII SLG RGR LVAKC P+D LVTANP+QATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFAS GFLELT YKL EVLGRNCRFLQGPETDPRAVDKIR AI+EG DTSVCLLNYRAD TTFWNQFFVAALRD EG TVNYVGVQCKVGDDYAR+VV Q +QLA
Sbjct: 385 QAENESLKGSIIGSLGQRGRELVAKCSPEDAESTLVTANPTQATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFASNGFLELTRYKLNEVLGRNCRFLQGPETDPRAVDKIRTAIDEGYDTSVCLLNYRADGTTFWNQFFVAALRDGEGNTVNYVGVQCKVGDDYARIVVNAQKKQLA 567
BLAST of mRNA_H-paniculata_contig3984.10329.1 vs. uniprot
Match: A0A6H5L7C4_9PHAE (BZIP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L7C4_9PHAE) HSP 1 Score: 280 bits (715), Expect = 3.930e-87 Identity = 147/202 (72.77%), Postives = 157/202 (77.72%), Query Frame = 1
Query: 1 QAENDSLKGSIIDSLGDRGRVLVAKCVPDDMGGLVTANPSQATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFASGGFLELTGYKLKEVLGRNCRFLQGPETDPRAVDKIRKAIEEGADTSVCLLNYRADMTTFWNQFFVAALRDSEGTTVNYVGVQCKVG--------------------DDYARLVVGEQNRQLA 546
Q EN+SLKGSI+ SLG+RGR LVAKC+P D GG + ILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFASGGFL LT YKL EVLGRNCRFLQG ETDPRAVDKIRKAI+EG DTSVCLLNYRAD TTFWNQFFVA+LRD +G TVNYVGVQCKVG DDYA++VV EQNRQ A
Sbjct: 385 QTENESLKGSIVGSLGERGRELVAKCMPADTGGSL---------ILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFASGGFLALTRYKLAEVLGRNCRFLQGAETDPRAVDKIRKAIDEGYDTSVCLLNYRADGTTFWNQFFVASLRDGKGNTVNYVGVQCKVGTESMYRRRIHAPLAAFECVGDDYAKIVVNEQNRQFA 577
BLAST of mRNA_H-paniculata_contig3984.10329.1 vs. uniprot
Match: A0A7S2WVR6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WVR6_9STRA) HSP 1 Score: 261 bits (668), Expect = 1.430e-84 Identity = 132/186 (70.97%), Postives = 148/186 (79.57%), Query Frame = 1
Query: 1 QAENDSLKGSIIDSLGDRGRVLVAKCVPDDMGGLVTANPSQATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFASGGFLELTGYKLKEVLGRNCRFLQGPETDPRAVDKIRKAIEEGADTSVCLLNYRADMTTFWNQFFVAALRDSEGTTVNYVGVQCKVGDDYARLVVGEQNRQLAAPTA 558
QAEND L+ +I + +G L+A C + G L+ ANP+ AT+ILDDPDYSLVKALQTAQQNFVITD SLPDNPIVFAS GFL LTGY L +VLGRNCRFLQGPETDPRAV KIRKAI+EG DTSVCLLNYR D +TFWNQFFVA LRDSEG VNYVGVQCKV DD+AR + + AAP+A
Sbjct: 75 QAENDKLRAAITEHMGSEADELLAACT-EGTGSLIAANPNDATRILDDPDYSLVKALQTAQQNFVITDPSLPDNPIVFASSGFLTLTGYSLDQVLGRNCRFLQGPETDPRAVHKIRKAIQEGFDTSVCLLNYRIDGSTFWNQFFVAPLRDSEGNVVNYVGVQCKVSDDFARAIAQSE----AAPSA 255
BLAST of mRNA_H-paniculata_contig3984.10329.1 vs. uniprot
Match: A0A836C8A6_9STRA (Aureochrome1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8A6_9STRA) HSP 1 Score: 259 bits (663), Expect = 4.650e-83 Identity = 130/182 (71.43%), Postives = 148/182 (81.32%), Query Frame = 1
Query: 1 QAENDSLKGSIIDSLGDRGRVLVAKCVPDDMGGLVTANPSQATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFASGGFLELTGYKLKEVLGRNCRFLQGPETDPRAVDKIRKAIEEGADTSVCLLNYRADMTTFWNQFFVAALRDSEGTTVNYVGVQCKVGDDYARLVVGEQNRQLA 546
Q EN SLK SI + +G+ G L+AKCVP+ LVT+NPS+AT++LDDPDYSLVKALQ AQQNFVITDASLPDNPIVFAS GFL LTGY ++LGRNCRFLQGPETDPRAV IR AIE G DTSVCLLNYRAD TTF+NQFFVA+L + EG VNYVGVQ KV D+YARLV+ +Q + A
Sbjct: 121 QNENASLKASIREYMGETGDELIAKCVPEGEDDLVTSNPSRATRVLDDPDYSLVKALQLAQQNFVITDASLPDNPIVFASSGFLTLTGYAADQILGRNCRFLQGPETDPRAVAVIRSAIERGEDTSVCLLNYRADGTTFYNQFFVASLCNGEGKVVNYVGVQSKVSDEYARLVMAQQEAEWA 302 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3984.10329.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3984.10329.1 >prot_H-paniculata_contig3984.10329.1 ID=prot_H-paniculata_contig3984.10329.1|Name=mRNA_H-paniculata_contig3984.10329.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=193bp MGGLVTANPSQATKILDDPDYSLVKALQTAQQNFVITDASLPDNPIVFASback to top mRNA from alignment at H-paniculata_contig3984:5581..15721- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3984.10329.1 ID=mRNA_H-paniculata_contig3984.10329.1|Name=mRNA_H-paniculata_contig3984.10329.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10141bp|location=Sequence derived from alignment at H-paniculata_contig3984:5581..15721- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3984:5581..15721- >mRNA_H-paniculata_contig3984.10329.1 ID=mRNA_H-paniculata_contig3984.10329.1|Name=mRNA_H-paniculata_contig3984.10329.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1158bp|location=Sequence derived from alignment at H-paniculata_contig3984:5581..15721- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |