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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 70.5 |
| Seed ortholog evalue | 8.8e-10 |
| Seed eggNOG ortholog | 2880.D7FP39 |
| Hectar predicted targeting category | other localisation |
| EggNOG OGs | 2E1MX@1,2S8Y8@2759 |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| Exons | 5 |
| Model size | 703 |
| Cds size | 513 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3977.10312.1 >prot_H-paniculata_contig3977.10312.1 ID=prot_H-paniculata_contig3977.10312.1|Name=mRNA_H-paniculata_contig3977.10312.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=171bp
MGAEDGKQLKSSRGGGQEGDGGKIDVLRPEVWEGDFGDTLQDFLEQESML
MECKLDANLAVADRRRLNTPVCFMRRVLGITRLRDSVDFSNATVDLIPTI
PLPDPPHPREKPPSRTRPKTEQSRLPRAEDSPRSCRRQDKYPLSYCPSVA
QQQQQQQHQQQQPHGSTARRP back to topmRNA from alignment at H-paniculata_contig3977:1023..9232- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig3977.10312.1 ID=mRNA_H-paniculata_contig3977.10312.1|Name=mRNA_H-paniculata_contig3977.10312.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8210bp|location=Sequence derived from alignment at H-paniculata_contig3977:1023..9232- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGCGGTGGTCGAGATTTGGGCGACTACGTCCTGCGGCAGAAAGCGGTGAA
GGGGATACCAAAGTCGTCCGAGGCGAGAAGTAGCTACGAGAGGGCGGGGC
GATCGACTCGACTGAATGGGCAGGACATGCTAATGCCGGGTACGGTTCAA
GTGGAGAAGGTGAGCAATCAGACCGAAGAGAGATGGAGCAACAAGCTAAA
TCATTAAGCGAGACATTTTTTACTGTAAATACAGCCGGTCAATCGGGGCT
GGGGGGGCGGAGGGGCGGAGGGATCCTCATGTTTTGCATTCAGTAGTTGT
TAGACCGTTGATCACGCGTCCTCGAGAGGACGGAGTTTTGTTCTTATTAG
AGCCAGTTCTGATTTGTTTGACCTACGTGATCTACCTCAACGCTTGCTTG
TTCAGATCAATTTCTATTCCTGGAACCGCCACCGCCTTCTTTTCGCAGTC
CCAAGGTTCAAACGCCTCTCAATCGCATCCTTTGATGGTCTCAAATTCAC
TCACATGACTTTTTTCTCTCTTTTTCATATGGGAGGCATTCTCCCACCAT
GTGAATTCGGTCCTCGAACGCACTACCGCACTACCGCACTTACATTTGAA
TATCTCGTCGCCTTCCTCGCCTATTATGTGTTTGTTTGCGGGGCGAAGGG
CTTCTGAAATTATGGTTAACAATTTTCGGTTACGTTGTCCTGCTATGAAA
AACGTGCTTGTATAGTGTGTGATAGTGCTTCTCAAAAGAAGTGGAGTAAT
TTTTCACCACAGCATTACACTAGTACGTATGTAGCTCGCCCACTCGCGCT
TTCCTTGTCCTACACTCCCCAATTCCCTTCATAAGTATATATATATATAT
GTATATATAATTAATATTGCTTCGCAGGTTCACACGCCTGGTGTGCACCA
TCCCAAGTTCGGGCTGTTATTTCTCAACGACGGGTCTTTGATAGTGTACG
TGGGGACAGCAAACCTAGGAACGGACACTGCGATTGAACTCACGTGGTGA
GTTAAGTCACTTGCGTGAGCATTTCGGCGAATTAACATTTTTTTAAGACT
TGAGCATGTAGGTTATGTACCTGTATGTGAGGAGATGGGAAGTGCGGGTG
CACCCATCTCATCGCCCATGCCTGTTTTCGTTTTTGGTTTGTTTCATTAG
AGCACGAAAATTTGCACCATGCAATCAATGGTTTTAATGTACAGTGGTAA
ACGGAACCTTGTCGACGTGTGTTTCAGCGTGGCTGCATACCCGAAGCATG
CATTTGTCTAGTGACTTTTCTTCCCTGGGGGGGGGGCGACCTAACGAACT
ACTCTGTGGACGCTTCAGGATACATGTGGAGAAGCGCAAGCGCAATAGAG
CAAGATCCATCGTATTGCGTCGGGCAGCGCGTTGCATGTGATCGTACATA
CCAGCCATATCGAATTTCGAACTCATGTATCACTCTTCGCTAGAGCTCTA
TGTGTACAACTATTGTCAACATAGCGACGTTCGAAACTCCTTCTCGTGTG
GTTTGCGCTGATGAAAATAGGGTGCAAAGGTTCAACGCGAGGCGCCCCTG
CTGCAATAAGCAGCAACATCGTCCTTACGTGCCAGCCGCGGCACCCGGCT
CCGGGGTGATGGGCGCAGAAGACGGCAAGCAGCTCAAGTCATCCAGAGGG
GGAGGGCAGGAAGGAGATGGGGGCAAGATAGACGTGCTGCGACCGGAGGT
GTGGGAAGGCGATTTCGGGGAGTGAGTATTGAGATGAAGGTGGTGCACCC
ACCAGGTATCGATATGCAGTATTAATAGTGATTACTAGAGGTCGACAGCA
GAGTTGTCACTTTTTTGGTGTTCAGATGTGCATCTACATTTTGTACGGTT
GTGTAAAATCGGTTTGGAAGAATAAAACTGATCAAAGCTCTGTCCAAGAA
TTTAGGACGACCTTTGGATATTATGAGGCATAACTCCTGCTGATTTACAA
CGTTTTTTTCCATGAGCTAGGATGGAACATAACAAGTAGCGTCAAAACCA
ACCTTGAAATTTTGTTAGTTATATCTCACAGAGCCGGCGCTCACAGCAGC
AGCAAACAGAGCTCGCTAGCGCGGAGTTAAGTTTGAAGACCTAGGACTCG
TCTGCTGACCATACCAAACGCTGCGCGTGTCCCCTAGGAACCAAAGAGAG
AAAATTTCATAACCACAGGAAGAAGAGCGGCAGCTTTTTTTTGTCGCTCA
CCCCACCCCCAAAGCATATTTGACGTGTTATTCAGTTTGATGATTCTAGA
GCCGCCACAGCCGCACCTACCATTGCATTCCAATTGTCAACTACACTTTG
GGACAGGCTCGTGTGACATACTCCCTTGGTCCCTAAGTCTTCGACGTTAT
CTATCTACGATTTATCGTTTTTTTGTGTAGGCCGTTTCTCTACGAATACG
AAAAGTTTTTGGGTCACGTATGGCTTGAGTTGAATCTACGGACGTAAATT
CTAAGAATATTTTTTGTGTTGTCACTATTGTTCCGAAATAGATTCGAGAT
TTCGCGAGAAGGGAAACTAAAAGAGGGCGCTTTTCGGCTCCATTTTGAGT
GGCTGCGCTGCGCCAGGCGGTGGACAAAGCGCCCTCCCTCAGGTCACACA
ACATCTCAGCACCTCGCCAAGAGCTGTGCGACTCTCGTGCAGCCTCCAGA
CCGTCTGCAGTGTGAGTTTCGCAACCAACATCACCACAACGGCAAGTCCG
GCATCTTTTGCCGAGAGCCCATCAGCCCAGGGTAAAAATTGCGAGCTGAG
CGAGGAAGGTCGAAACGTGTCGGCCGTACGGTACGCGTTAGCTCTCCCTC
CTGGTAAGAAACAACTTCTGAAAGGCGTTGGGCCAGAGTTGGCGACCAAT
TTTCCAGACAACCCTGGGCGCCTGTGCGAGAACAACTGGACCATGGCAAC
ACCCTTCCGCTGAGGTCAGCGTCACGAAGCGGGCGGCCGTCGGACTTGAC
ACCGACAAAGCACGTCACGATTCGAAGGGTCAACGCCGCGAATCGAACCC
TGACCCTCGATCAACTATCTGCCAAGATAGCCGAAGTTGGTCTCGTAGCC
GGCAGCTTCGATATTGTGCGTACGCTTGCAGAACACACGCTCCCAGGCGC
CGGTCAACCATTTAACTAACTCGTGGTCAGAGTCGAGCGTCAGCGTGAAC
ATCAATCACCGGCGCTGCTCGCAAGACGTGCACGCTGCCGCCCAACTCTG
ACGAGATCTTAAACAATCCGGAAAAGTCAAACATGGAAATAACACTCAGT
ACAGCACGGCACGCATGTATAGAAGTGCGTGTCCAGTTAGTAACAGTACA
TGGGACAGAACTAGCTGTGTGCACGGGCGAGTGTCGGAGTAGTTATCTGT
GCCGTAACTTGTGTACAGACAGTTTAGTATATTTAGTGTGAGGTGAAATG
TCAAGAAAGATCCGCATTTCATTTACTGCATCTTTGAAAATACGTCACAT
GTTCTACATTGTGCTGTATGTCCATACTAGTTGATGCCATTCAAAAATTC
CGAAAGAGTCTGGAAACGTGGAGCACAGTCCGTTCAGCGGAAGCCATACA
CCGCTGCAAGACTCGAGACATGCCTCCGCTCGTGACTCCGGGGCGCGGGA
CCGTTTAAAATAATCGGGTACAGCAAGCAAGATTTTTAGCATAGGTCGTC
GCATTATGTGCGATACGAACGAAATGCGTTCGAAAACATCGTGTAATATT
TCTCCCCTCGCTGTTATTTTGTCAAGTCGAAAATACTGGAAAACATACAT
AAAATAGTGGCGAGTTATACCCACTTGTCCTGTTGATGAAGCGCGTTCTG
CACGGGCAATCCGGCGTTTGTTGTCTTCTAAAAGCGAGAGAGAAAAAAAT
GACAACGAGTATCATGTGCTGCAATAGCACGGTCGAATGGACCAGGTATC
ACTCGATACCGATCGCCGTTGCTGTCGAGTTGTGCAGGTATTGACTTTTA
CGTTATTTGCTGTGGTACTCGTCCACTCTACATGTGTTGGATAAAGAACT
TTTTTTATCCATGCACTCACTGGACGTTTGCTGACCGAAAAAGACCGTAA
AATCACTCCACTGCTCTCACGCTTGTGTTTGCTCTGGCGGGAATCGTTGC
GTGGGATTTGTTTCCCATGATCTGTGTGCACATTTGTGTTTATTTTTGTG
TGTGTTTTGTCCCCCCCCCCCCCCTCCCCCCGTGCGCGGATCACGCTGCC
TCCAGCACCTTGCAAGACTTTCTGGAGCAGGAGTCTATGCTGATGGAATG
TAAACTTGACGCGAATCTTGCCGTCGCTGACAGGAGGCGTCTTAAGTGAG
TACAGGCAGTCTACCAGGTGGCCTCAGGCGATCGCCGGGCTGGGCGTCTC
TTTTTATGCGCGTAGAGCGCGCTGCAGTGTTTCTTCGTTGTCCAGCGCAG
GTCATGTGATATGGGTATCTTTTATATGTATTGAGTAAAACCTCCAAAAC
GCCGCAGAAATTGTAACGTATGGCTCGTGCAGCGTTGCAAGTTGACCTCG
CAGTGATGTTCTCAGCTTTGAGGGTATTATATATAGAGAAAGAGATATAT
ACTTCCTCTGTCTCAGTATACTCAGTGAAGATTATAGAGGCACTTGAGTA
TCTCCGTTTTTTTTAATTGAATTCTACATGTTTTTTTGGGCTGAATCCCA
ATTTTTGGGTCGAAAAATTGACTTTTATTACCACAACACGCGCCGTGAAA
AAACTACTTGGCCGAAAAAAGGCCCTTTTATGGAACTTTTTCCCATAGAG
CTCGAAAAACACGTGCACTTTTTGGCGTTTTTCGGCTGAGTGTTTTTTTT
CATGGCGTGTGCTTTGCTGTTAAAGGTCAATTATTGGACTCAACATTTTG
GGGTTCAACCCCCAAAACGTGTAGGATGCTAATTAAAAAAAACAACGGAG
AGACCTCAAGTGCGTCTCTAATCACGACATACTGTACTTATGAAACAATA
CCGAACGTCCCAAAAAAGGGCCATTTTGCGGCCGAAGTTTATTTCCACGG
CGCTTGTTTTGGTGTTAAAAGTCAATTGTTTGACCCCAAAAAATGGATTT
CAACCCCAAAAACATGTAGAATTCCATCTAAAGAAAGCGGAATGTTAAAG
TGCCTCTATAAGTATAACGGAGTATACTTATGAGACAAAGGAAGTATATA
TATTCACTAGGACCTCTATTTCACCCACTTATGGCTGTGTGTCAAACGTA
TAACCGAAGTAGCAGTGGCAGCGCTGCCGCGCTCATCACGCAGGCAGCAT
CCGACGGACAGCCTATGGAGATCGCTGCCTCAAAAGCTACTTGGTGTGAT
GTGGACCACCAGTCCACTGCTGTTCATGAGTAAATATTTGTCCCCTTTGT
TCATACATGTTACGTACCATGTGTGATGCGGCAAATGCACAACGGCCTCC
GCTTTTCAACACAACAGGCTATTTTCACGTCACAACTTGTGGAGATAGTT
ACGGAGATGTGTGCAACATTGCTCAGGGTGTTGTGCACGCCATACTAAGC
GGCGCTAGGCTAGAATAGGCCGGGGCCCGAGCACGCTCTTGGCGCTCCCC
TGGCTTGGGTGTTGGGCGCCGCTGCAGCGTGTCTATTCAATGGGTTTGAT
TCTTGTACACGAGACGGCCATAAATATATATGCAAATGACCATTTCTGGG
AGGTGCACGGGGCCGAAAAATTACTTCGCGGTCCATTTAATGTTTTAGAG
CAGACGGGAAAAGAAACGGGAGATGTATAGGGACAGGGATATATTCGCTA
GTGCAAGTTACTTGCAACCACCGTTGCTGTTAACAGCAGTCGTTTTATAC
TAGGTCATCATTTACTGAATCTATTTATAGATTCATCAAATTCAGTCGCT
AGTCGTTTGTTCATCATCATGCTGATTTACTACATGGGTGGTGGGTTGTA
CTTTGTGGATTTTACTTTTGCCATAGGCGTTCAAGGGATTCGACCCTTTC
CTTTTTTTGCACACCAAGTTGTGAGCGTAGTTGAAGGGCTCGTCGCTGCA
GTAGGCAGGTACGGTGGTACCATCACACTGTAGTATGGTGGAATATGCGT
ACCCGTGGCCAATTACTACAGCCCCCAGCCGAAGTTGTTTGCGTCTTTTT
GACGATGATCGGGTTGTTTGCTTCAGGGTGCCAGTATCGTGCAGGCATCG
CGTTCATGCGCAGCTGTGAATGATGGTCTGCGCTTTTGTTGGGGGGGGGT
AACACACATACTGATACATCGGTGGTACGACCTGGTAGGAATAACGAGAG
GTTATCGTTTTTTTTGTGTTTCATCTGTTGTCCTGTTCAACAAAAAATTA
CAAAAAATAGATACAGCGAGCCCTTTTTCTCTATATGTGGATGTCGTTGT
ACGATTTTTCGGTTAGCCACTATTTTTGCTGGATTTTAGTTCGTATGCCT
ACATATATAGGGTTAATATGTACATATATACGTCTTCGAATTTGTAATGT
ATGAGGCGGCTGCCGTGCGGTATATGTCGTTTTCGTTGTTTGTGTTAGTA
GTTGTGATTTAGTTACTGCAGCGATAAAGTCAACTACATTGGATAAGACC
GCAATGCATACCAATAATGGAGTGATTGACACACTTGACACCCACGGTAG
AATACCCAGGGTGTGTTCAGTTGTGCAAACAGGCCACCAGTACGACGCCC
CCCGCTGCCACACACTTTCCTCTGTTTCAAGACGGTAGGTCGAATGCAGC
CTTTCAAACCTTGCTTGAAGTCGCCCCCCCGCTACAACTCCTTCTTCATT
TCCCTTTCCGTCCCTGCTTGTCTCTTCTGTTACTTTTCAGCACCCCCGTC
TGCTTCATGCGGCGAGTTCTGGGCATCACCCGCCTAAGGGACAGCGTGGA
TTTCAGCAACGCAACCGTGGACCTGATTCCCACCATCCCGCTTCCTGATC
CACCGTAAGTGTTTTTATCTCGAGTATTATGCACAAAGGATTTTGTCATT
ATCCACTGTCTGTCGTCGGGCGAGCTTCGTGTTGAGCGGGGGGTGTTACA
ATCCTACGGCCGGGATGACTGCCCTCGGTGTTGGCCATGTATAACCAGGA
TGAAGCGGGGAGGGGGAGGTGTTAGTCATGTTTTTTATGCCCTAGGTGTT
GGGGTAGACTATTGGTCTCGCGTATTCCTCGAGAGGACGGAAAGTTGTTC
ACGCAAAAGCCATTTCCGATTGTTGCCATATTTCCCTTCTTTATAATTGT
TTGCGCAAAACGGTATCCTCTTGCAAATTTCTGTTTGATCATATATAGCT
AACAGTGAGCTGCTCATCGTGACCCCCTCCGGACCCCAGCTTACCCACAC
CAACATCTTGCTACGAAAGGGATTCCTTCCAGAATCCGTATATTGCGTGA
GAGATGAGAATGGTCATTGGTTGAGAAAAATAAACTCGTTTGGTAACGAG
ACGTTCGTGTAAGTGGACTGGGGTCCGGGACGAGGAGCTCCCTGTTGGAT
ATATACGACCAAATAAGTTTTTGCAAGGAATTCGTTACACCCTAATTTAC
GGAGATCCTGCCCGCGTCAGCCTTCGCTCGCTCAGCTAATCTATCTCATA
GAATTGGGCGGGGATAGCGAAGGAGGGAAATTCAGGCACTATTATGGATA
CCTGGAGGCTCTTACCTACTATATCGAACACTCAAGGGGTGGGTGAGCAT
GTGCGTGGAGCCGCGAGGACGCGAGGACGCAAGGACGCGCACTCTTCCAT
GTCGACATTGGCCATTACATCTCTTTTCCCTTTGCTCTTTGCTGGCTCTC
TCAACTATATTGAAAATAGGCACATTCGTAAAGAGAAAACTTATTCCAAC
ACATCGATGCGTCGCGAAAAAGCCTTACTATTTTTCTTCTTTATCAAGCT
GAAACACATTACATGCATGGCACACAGAAAAAAGCTGACAAAAGAGCAAT
GGTCTACTTCGCTTCTCTGCGCCCCCCTCCCCCCTATTTCACCACGGGAT
GGTCGCAGATTACCAACCTTCTGCGAAACCACGTTCCCCCCCCCCCCCCC
CCCACCAACCATAGGCATCCCCGCGAGAAACCGCCATCACGAACGAGACC
AAAAACGGAGCAGTCACGCCTCCCTAGAGCCGAGGATAGCCCTCGGTCAT
GTCGGCGACAGGACAAATACCCCCTTTCTTACTGCCCCTCTGTCGCGCAA
CAGCAGCAGCAGCAACAACATCAACAACAACAGCCCCATGGGTCTACCGC
TCGCCGGCCG back to topCoding sequence (CDS) from alignment at H-paniculata_contig3977:1023..9232- >mRNA_H-paniculata_contig3977.10312.1 ID=mRNA_H-paniculata_contig3977.10312.1|Name=mRNA_H-paniculata_contig3977.10312.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1026bp|location=Sequence derived from alignment at H-paniculata_contig3977:1023..9232- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGCGCAGAAGACGGCAAGCAGCTCAAGTCATCCAGAGGGGGAGGGCA
GGAAGGAGATGGGGGCAAGATAGACGTGCTGCGACCGGAGGTGTGGGAAG
GCGATTTCGGGGAATGGGCGCAGAAGACGGCAAGCAGCTCAAGTCATCCA
GAGGGGGAGGGCAGGAAGGAGATGGGGGCAAGATAGACGTGCTGCGACCG
GAGGTGTGGGAAGGCGATTTCGGGGACACCTTGCAAGACTTTCTGGAGCA
GGAGTCTATGCTGATGGAATGTAAACTTGACGCGAATCTTGCCGTCGCTG
ACAGGAGGCGTCTTAACACCTTGCAAGACTTTCTGGAGCAGGAGTCTATG
CTGATGGAATGTAAACTTGACGCGAATCTTGCCGTCGCTGACAGGAGGCG
TCTTAACACCCCCGTCTGCTTCATGCGGCGAGTTCTGGGCATCACCCGCC
TAAGGGACAGCGTGGATTTCAGCAACGCAACCGTGGACCTGATTCCCACC
ATCCCGCTTCCTGATCCACCCACCCCCGTCTGCTTCATGCGGCGAGTTCT
GGGCATCACCCGCCTAAGGGACAGCGTGGATTTCAGCAACGCAACCGTGG
ACCTGATTCCCACCATCCCGCTTCCTGATCCACCGCATCCCCGCGAGAAA
CCGCCATCACGAACGAGACCAAAAACGGAGCAGTCACGCCTCCCTAGAGC
CGAGGATAGCCCTCGGTCATGTCGGCGACAGGACAAATACCCCCTTTCTT
ACTGCCCCTCTGTCGCGCAACAGCAGCAGCAGCAACAACATCAACAACAA
CAGCCCCATGGGTCTACCGCTCGCCGGCCGGCATCCCCGCGAGAAACCGC
CATCACGAACGAGACCAAAAACGGAGCAGTCACGCCTCCCTAGAGCCGAG
GATAGCCCTCGGTCATGTCGGCGACAGGACAAATACCCCCTTTCTTACTG
CCCCTCTGTCGCGCAACAGCAGCAGCAGCAACAACATCAACAACAACAGC
CCCATGGGTCTACCGCTCGCCGGCCG back to top
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