mRNA_H-paniculata_contig39738.10305.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig39738.10305.1
Unique NamemRNA_H-paniculata_contig39738.10305.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig39738.10305.1 vs. uniprot
Match: A0A7D9D5L2_PARCT (Uncharacterized protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9D5L2_PARCT)

HSP 1 Score: 211 bits (537), Expect = 3.310e-63
Identity = 110/288 (38.19%), Postives = 167/288 (57.99%), Query Frame = 1
Query:   67 VDEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKRYGFDECRGVPTPAEGNKSLGAVPSDKGAGVQENSRGRSGNSSEYRGMVGSFVHASTGTRPDITYAVHQAARRMEGPCREDFSTGKRIFCCLSTVPDLGITFGGKSNGHGLEGFVDADWAEGVEDRKSTTGYVFKLKDGAISWCSRKQQVTTWSSTEAEYVAAGEARKEAVYLRELLGSIGLGCRGRPTLFEDNKSAINVSKGSGSHCRTKHIGVRWHGIREWIREGILALKYVGYDR 930
            + E K  I  +F++ D+G +  VLG+ +RRDR  G +TISQ +Y++ +LKR+G ++C+ V TP E  K    +P D      EN      N++EY+ ++G   + +T TRPD+  AV   ++ M  P +E +   KR+   +    + G+ F GKS    L G+ DADWA  ++ R+ST+GYVF++    +SWCS++Q   T S+TEAEYVA   A +E V+LR LL  IG        + EDN+ AI +SK    H RTKHI V +H +RE + +  + + Y   D+
Sbjct:    2 LSEEKKLIGLKFKVDDMGEVKHVLGMVIRRDRRKGKMTISQSTYLQGILKRFGMEQCKPVSTPLEPGKHFQELPDD------ENPT----NTNEYQKLIGCLTYVTTATRPDLASAVGILSKFMSKPSKEHWHGAKRVLRYIKDTVNYGLVFEGKSTKCSLIGYSDADWANDLDTRRSTSGYVFQINGSTVSWCSKRQPCVTRSTTEAEYVALSHATQEIVWLRRLLNDIGEKQDQPSIMNEDNQGAIELSKNPRFHNRTKHIDVAYHFVREKVGDKSINVNYCSTDK 279          
BLAST of mRNA_H-paniculata_contig39738.10305.1 vs. uniprot
Match: A0A4S4L116_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Bondarzewia mesenterica TaxID=1095465 RepID=A0A4S4L116_9AGAM)

HSP 1 Score: 211 bits (537), Expect = 2.860e-62
Identity = 123/307 (40.07%), Postives = 175/307 (57.00%), Query Frame = 1
Query:    1 GETNLLVAVYVDDVVIAGRR-EKVDEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKRYGFDECRGVPTPAEGNKSLGAVPSDKGAGVQENSRGRSGNSSEYRGMVGSFVHASTGTRPDITYAVHQAARRMEGPCREDFSTGKRIFCCLSTVPDLGITFGGKSNGHGLEGFVDADWAEGVEDRKSTTGYVFKLKDGAISWCSRKQQVTTWSSTEAEYVAAGEARKEAVYLRELLGSIGLGCRGRPTLFEDNKSAINVSKGSGSHCRTKHIGVRWHGIREWIREGILALKYV 918
            G+   LVAVYVDD+V+A      ++E K+   + F + DLG ++ +LGI V RDR   +I++SQ  Y+ EVL R+G  +   + TP   N+ L  V ++K    + + R        Y+ ++GS + A  GTRPD+ + +   ++    P  E      R+   L    D  + + G      L GFVDADWA  V DR+S +G+VFK+ DGAISW S+KQ  T  SST+AEYVA   A KE V+L  L   I L C+G  TLF DN+SA+ +++    H RTKHIG R H +RE + +G L LKY+
Sbjct:   83 GDKLTLVAVYVDDMVLASTSLADLEEVKNLFKKSFNITDLGDINWILGIHVERDRTKRSISLSQERYVEEVLSRFGQQDAHPMVTPMLANQRL--VRTEK---PEVDIR-------TYQRILGSVMWAMLGTRPDLAFTIGSLSQFSSAPTEEALHALMRMLRYLCRTSDTRLVYRGTQKEE-LTGFVDADWAGNVNDRRSISGFVFKVADGAISWSSKKQGSTALSSTKAEYVAGTHAAKELVWLWALFAEISLPCKGPTTLFMDNQSAMAIAENPVYHARTKHIGARHHFLRERVEDGELELKYL 376          
BLAST of mRNA_H-paniculata_contig39738.10305.1 vs. uniprot
Match: A0A0S7JP25_9TELE (POLX n=2 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7JP25_9TELE)

HSP 1 Score: 210 bits (534), Expect = 5.220e-62
Identity = 123/307 (40.07%), Postives = 175/307 (57.00%), Query Frame = 1
Query:   16 LVAVYVDDVV-IAGRREKVDEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKRYGFDECRGVPTPAEGNKSLGAVPSDKGAGVQENSRGRSGNSSEYRGMVGSFVHASTGTRPDITYAVHQAARRMEGPCREDFSTGKRIFCCLSTVPDLGITFGGKSNGHGLEGFVDADWAEGVEDRKSTTGYVFKLKDGAISWCSRKQQVTTWSSTEAEYVAAGEARKEAVYLRELLGSIGLGCRGRPT-LFEDNKSAINVSKGSGSHCRTKHIGVRWHGIREWIREGILALKYVGYDR 930
            ++AVYVDD++ I    E +DE K  + +R++MKDLG LS +LGI V +D+    I + Q  YI  +LK+YG D+   V TPA+ +  L      K  GV         + S Y+ MVGS ++A+  TRPDI  AV   ++    P     +  KRI   L    +L + F    N   L GF DADWA  ++DR STTG +F L  GA+SW S+KQ     S+ EAEYVA  +A +E  +LR LL  +G+  +  PT + EDN+ AI ++K    H RTKHI +R+H IRE +++G + L+Y   D+
Sbjct:   49 IIAVYVDDLMLITESTESMDELKLTLQERYKMKDLGELSYILGISVIQDKEKNCICLHQKQYIETILKKYGMDKANPVATPADISVKL-----KKDDGVSNPV-----DPSTYQSMVGSLLYAAMTTRPDIAQAVSAVSKFNANPNTAHLTAVKRILRYLKGTVNLALKFDCAGN-KDLIGFSDADWAGDLDDRHSTTGNIFLLSGGAVSWLSKKQATVALSTAEAEYVALSQAAQEGTWLRRLLNDLGMVTK--PTVILEDNQGAIAIAKNPVDHSRTKHIDIRYHYIRECVQDGEVKLEYCPTDK 342          
BLAST of mRNA_H-paniculata_contig39738.10305.1 vs. uniprot
Match: A0A7D9M6E1_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9M6E1_PARCT)

HSP 1 Score: 209 bits (531), Expect = 2.190e-61
Identity = 109/301 (36.21%), Postives = 182/301 (60.47%), Query Frame = 1
Query:   16 LVAVYVDDVVIAGRR-EKVDEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKRYGFDECRGVPTPAEGNKSLGAVPSDKGAGVQENSRGRSGNSSEYRGMVGSFVHASTGTRPDITYAVHQAARRMEGPCREDFSTGKRIFCCLSTVPDLGITFGGKSNGHGLEGFVDADWAEGVEDRKSTTGYVFKLKDGAISWCSRKQQVTTWSSTEAEYVAAGEARKEAVYLRELLGSIGLGCRGRPTLFEDNKSAINVSKGSGSHCRTKHIGVRWHGIREWIREGILALKY 915
            +VA++VDD+++AG+  EK+ + K +I++RF++KD+G L  +LG++V ++  +G + I Q +Y   ++K+YG + C+ V TP + +  L +   D     +E          EY+  VGS ++ S+ TRPDIT+AV+  A+       E ++  KRIF  L    + G+ +   +N   + GF DADWA  + DRKST+GY F++   A+SW S+KQ     S+ EAEYVA   A +EA+++R+LL  + +      T++EDN+SAI +SK    H R+KHI +++H +R+ + +  L + Y
Sbjct:   63 VVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQE--DGKVWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLVSAMEDSELFNKE----------EYQSAVGSLLYLSSATRPDITFAVNNVAKFSANFTNEHWTAVKRIFRYLKKTVNYGLLYSENANPDCV-GFSDADWAGDLNDRKSTSGYTFQINGAAVSWRSKKQTCVALSTAEAEYVALSAAAQEALWMRQLLTDLNVNIDKPMTIYEDNQSAIAMSKNPQFHGRSKHIDIKYHFVRDQVEKKTLTVLY 350          
BLAST of mRNA_H-paniculata_contig39738.10305.1 vs. uniprot
Match: A0A6D2JBX5_9BRAS (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2JBX5_9BRAS)

HSP 1 Score: 204 bits (520), Expect = 7.730e-60
Identity = 119/310 (38.39%), Postives = 178/310 (57.42%), Query Frame = 1
Query:    1 GETNLLVAVYVDDVVIAGRR-EKVDEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKRYGFDECRGVPTPAEGNKSLGAVPSDKGAGVQENSRGRSGNSSEYRGMVGSFVHASTGTRPDITYAVHQAARRMEGPCREDFSTGKRIFCCLSTVPDLGITFGGKSNGHGLEGFVDADWAEGVEDRKSTTGYVFKLKDGAISWCSRKQQVTTWSSTEAEYVAAGEARKEAVYLRELLGSIGLGCRGRPTLFEDNKSAINVSKGSGSHCRTKHIGVRWHGIREWIREGILALKYVGYD 927
            G++ L+V++YVDD++  G     ++EFK ++ + F M DLG +   LG+EV +D     I I+Q  Y  E LK+YG + C  V  P         VP +K   +     G + + + ++ +VGS  +  T TRPD+ Y+V+  +R ME P  +     KRI   +      GI +  +  G  L GFVD+D+A  V+DRKST+GYVF L  GA+SW S+KQ + T S+TEAE+VAA     +A++LR +LG IG       TLF DN S I +SK    H R+KHI VR++ +R+ + E ++ LK+ G +
Sbjct:   52 GDSILIVSLYVDDLIYTGNSLTMLEEFKQSMMKEFAMTDLGKMKFFLGVEVIQD--GRGIFINQQKYAEETLKKYGMEGCNAVKNPI--------VPGNK---LSRAGGGDAADPTMFKQLVGSLRYL-TATRPDLIYSVNLVSRYMENPNEQHLLAAKRILRYVQGTCGFGIRYK-QGEGEKLVGFVDSDYAGDVDDRKSTSGYVFMLGGGAVSWASKKQPIVTLSTTEAEFVAAAYGACQAMWLRNILGEIGWAQEEGTTLFCDNSSTIKLSKNPVLHGRSKHIHVRYYFLRDLVNEEVILLKFCGTE 346          
BLAST of mRNA_H-paniculata_contig39738.10305.1 vs. uniprot
Match: A0A6S7HNY1_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HNY1_PARCT)

HSP 1 Score: 216 bits (550), Expect = 1.030e-59
Identity = 118/303 (38.94%), Postives = 179/303 (59.08%), Query Frame = 1
Query:   13 LLVAVYVDDVV-IAGRREKVDEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKRYGFDECRGVPTPAE-GNKSLGAVPSDKGAGVQENSRGRSGNSSEYRGMVGSFVHASTGTRPDITYAVHQAARRMEGPCREDFSTGKRIFCCLSTVPDLGITFGGKSNGHGLEGFVDADWAEGVEDRKSTTGYVFKLKDGAISWCSRKQQVTTWSSTEAEYVAAGEARKEAVYLRELLGSIGLGCRGRPTLFEDNKSAINVSKGSGSHCRTKHIGVRWHGIREWIREGILALKY 915
            +++A+YVDD++  +   E + + K  +++RF+++D+G +S VLG+ V+R+R   T+TI+Q  Y+  VLKR+G  EC+ V TP E G K      +D    V+E           Y+  +G   +A+  TRPD+  AV   ++ M  P ++ +   KR+   +      G+TF    N   L G+ DADW   VE R+ST+GYVF++++  ISWCS++Q   + S+TEAEY+A   A +EAV+LR LL  IGL      T+FEDN+ AI +SK    H RTKHI V +H IRE +   I+ +KY
Sbjct: 1010 VILALYVDDILWFSNNTEMLKKEKEALAKRFQVEDMGEVSYVLGMSVKRNREARTLTINQPKYLEGVLKRFGMQECKAVSTPLEPGRKFESLSENDTPIDVRE-----------YQMAIGCLTYATNATRPDLAAAVGILSKYMARPGKDHWQGVKRVLRYVKGTLHSGLTFTAHGNNPVLYGYADADWGGDVETRRSTSGYVFQIQNNTISWCSKRQASVSRSTTEAEYIALSTACQEAVWLRRLLSDIGLKQDVPSTIFEDNQGAIELSKNPKFHNRTKHIDVSFHFIREQVNRNIVCVKY 1301          
BLAST of mRNA_H-paniculata_contig39738.10305.1 vs. uniprot
Match: A0A401H4R8_9APHY (Uncharacterized protein n=2 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H4R8_9APHY)

HSP 1 Score: 215 bits (548), Expect = 1.990e-59
Identity = 121/306 (39.54%), Postives = 181/306 (59.15%), Query Frame = 1
Query:    1 GETNLLVAVYVDDV-VIAGRREKVDEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKRYGFDECRGVPTPAEGNKSLGAVPSDKGAGVQENSRGRSGNSSEYRGMVGSFVHASTGTRPDITYAVHQAARRMEGPCREDFSTGKRIFCCLSTVPDLGITFGGKSNGHGLEGFVDADWAEGVEDRKSTTGYVFKLKDGAISWCSRKQQVTTWSSTEAEYVAAGEARKEAVYLRELLGSIGLGCRGRPTLFEDNKSAINVSKGSGSHCRTKHIGVRWHGIREWIREGILALKY 915
            G   +++ V+VDD+ ++   R  +DE K  + + F + DLG +  +LG  V RDR   T+ +SQ SYI  +++R+GF++ + + TP + N +L +  S      Q  +   +     YR  VGS ++AS GTRPDITYAV   +R  + P R  +   KR+F  LS   DL +T+G  + G  L G+ DAD +   EDRK+ +GY F +  GA+SW S++Q++   S+TEAEYVAA  A KEA++LR L+G +        TL+ DN+SAI +S+ +  H RTKHI +R+H IR  + E  L L Y
Sbjct: 1224 GTDLIVIVVHVDDLTIVTSSRALIDEVKAQLRKAFGISDLGEIHWILGFAVERDRTARTLALSQTSYINSIIQRFGFEDLKPLTTPMDPNTTLSSAQSP-----QTTAEAAAMRDIPYREAVGSLMYASLGTRPDITYAVSFLSRFSDNPGRAHWEAVKRVFRYLSGTKDLKLTYG--AQGLDLVGYTDADGSM-HEDRKAISGYAFLIDGGAVSWSSKRQEIIALSTTEAEYVAATHAAKEALWLRSLIGQVFQPFSEAVTLYSDNQSAITLSRDNQYHARTKHIDIRFHFIRWIVEEEKLKLIY 1521          
BLAST of mRNA_H-paniculata_contig39738.10305.1 vs. uniprot
Match: A0A4Y9ZY34_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZY34_9AGAM)

HSP 1 Score: 215 bits (547), Expect = 2.140e-59
Identity = 120/305 (39.34%), Postives = 169/305 (55.41%), Query Frame = 1
Query:    7 TNLLVAVYVDDVV-IAGRREKVDEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKRYGFDECRGVPTPAEGNKSLGAVPSDKGAGVQENSRGRSGNSSEYRGMVGSFVHASTGTRPDITYAVHQAARRMEGPCREDFSTGKRIFCCLSTVPDLGITFGGKSNGHGLEGFVDADWAEGVEDRKSTTGYVFKLKDGAISWCSRKQQVTTWSSTEAEYVAAGEARKEAVYLRELLGSIGLGCRGRPTLFEDNKSAINVSKGSGSHCRTKHIGVRWHGIREWIREGILALKYV 918
            T L  A+YVDD++ ++   + + E K  + + F M DLG +  VLG+EV RDR   TI +SQ  Y+ E+L+R G+ + R + TPA  N+ +  V + +   +             Y+  +GS ++A  GTRPD+ Y V   ++    P         R F  L    D  + F GK     L G+VDADWA  V DR+S +GY F L  GA+SW S+KQ  T  SSTEAEY+AA  A KEA +LR  LG IG  C+    L  DN+SA+ +++    H RTKHI VR+H +RE +  G + L+YV
Sbjct:  815 TILYAAIYVDDIILVSNSMDALLEAKEALKRLFNMSDLGEVHWVLGLEVIRDRNARTIALSQRRYVEEILERAGYSDARPIATPALANEHMAKVDAPEVDVLT------------YQSGIGSLMYAMLGTRPDLAYTVGVLSQHTAKPGEAHQRALVRAFKYLRGTADYQLVFDGKKPWE-LTGYVDADWAGDVNDRRSISGYTFLLAGGAVSWSSKKQNTTALSSTEAEYIAAAHAAKEATWLRTFLGEIGRPCKTATLLLMDNQSAMAIARNPAFHARTKHIDVRYHFLREKVEAGAINLQYV 1106          
BLAST of mRNA_H-paniculata_contig39738.10305.1 vs. uniprot
Match: A0A0C9VSW1_SPHS4 (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sphaerobolus stellatus (strain SS14) TaxID=990650 RepID=A0A0C9VSW1_SPHS4)

HSP 1 Score: 210 bits (535), Expect = 4.920e-59
Identity = 120/303 (39.60%), Postives = 171/303 (56.44%), Query Frame = 1
Query:   13 LLVAVYVDDVVI-AGRREKVDEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKRYGFDECRGVPTPAEGNKSLGAVPSDKGAGVQENSRGRSGNSSEYRGMVGSFVHASTGTRPDITYAVHQAARRMEGPCREDFSTGKRIFCCLSTVPDLGITFGGKSNGHGLEGFVDADWAEGVEDRKSTTGYVFKLKDGAISWCSRKQQVTTWSSTEAEYVAAGEARKEAVYLRELLGSIGLGCRGRPTLFEDNKSAINVSKGSGSHCRTKHIGVRWHGIREWIREGILALKYV 918
            ++VAVYVDD++I +   E V + K ++  +F M DLG    +LG+E+ RDRP+ T++ISQ +Y  E+L+R+G  +C+  PTP E   SL  +     A V          S  Y+  VGS ++   GT PD+ ++V   ++    P  E     KR+   +    DLG+ F G  N   +E F+DADWA+   +R S TGYV  L    ISW S+KQ  T  SSTEAEY+AA  A KEA++LR  +  +G        L+ DN+SAI + K S  H RTKHI VR+H IRE + +  + L Y+
Sbjct:  393 VVVAVYVDDLLIFSSSIEAVKKVKKDLKGKFEMTDLGEAHWILGMEITRDRPSHTLSISQKAYFAEILERFGMSDCKPAPTPMEVGVSLRKLSE---AEVD---------SQHYQSAVGSLMYGMIGTHPDVAHSVGVLSQHCATPGEEHEKGNKRVLRYIKGTTDLGLVFIGSGNTK-IEVFIDADWAQDKNNRHSLTGYVCTLAGATISWSSKKQSSTAQSSTEAEYMAATHAAKEALWLRMFMRELGFEQDSPTPLYVDNQSAITLVKNSEFHSRTKHINVRYHFIRENVEDEQIELVYI 682          
BLAST of mRNA_H-paniculata_contig39738.10305.1 vs. uniprot
Match: A0A4Y9ZJA2_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZJA2_9AGAM)

HSP 1 Score: 213 bits (542), Expect = 1.240e-58
Identity = 122/306 (39.87%), Postives = 175/306 (57.19%), Query Frame = 1
Query:    7 TNLLVAVYVDDVVIAGRR-EKVDEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKRYGFDECRGVPTPAEGNKSLGAVPSDKGAGVQENSRGRSGNSSEYRGMVGSFVHASTGTRPDITYAVHQAARRMEGPCREDFSTGKRIFCCLSTVPDLGITFGGKSNGHGLEGFVDADWAEGVEDRKSTTGYVFKLKDGAISWCSRKQQVTTWSSTEAEYVAAGEARKEAVYLRELLGSIGLGCRGRPT-LFEDNKSAINVSKGSGSHCRTKHIGVRWHGIREWIREGILALKYV 918
            T L++ +YVDD+  A    E + + K  +S+ F + DLG +  +LG+EV RDR    +T+SQ  YI +VL+R+GF + R + TP   N+ L  +P+      + ++R       +Y+  VGS ++A  GTRPDI YAV   ++    P  E ++   R F  L    D  + + GK     L G+VD+DWA    DR+S +GYVF L   AISW S+KQQ    SSTEAEY+AA  A KEAV+LR LL  +      RPT L  DN+ AI ++K    H  TKHI VR H +R+ + +G +A +Y+
Sbjct: 1084 TLLIIIIYVDDIGAASNSMEAILQAKARLSKIFEITDLGEMRWILGMEVTRDRALKIVTLSQKRYIADVLERHGFADARPISTPVSVNQKLEKLPA-----AEIDAR-------KYQSAVGSLMYAMLGTRPDIAYAVGLLSQHSSAPGAEHWNVAARTFKYLRRTADYQLVYNGKRKNDELTGYVDSDWANDPNDRRSISGYVFTLAGAAISWSSKKQQSVAQSSTEAEYMAAAHATKEAVWLRMLLSDLRQPIE-RPTPLLIDNQGAIALAKNPAYHACTKHIDVRHHFLRDKVEDGTIAAEYI 1376          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig39738.10305.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7D9D5L2_PARCT3.310e-6338.19Uncharacterized protein n=1 Tax=Paramuricea clavat... [more]
A0A4S4L116_9AGAM2.860e-6240.07Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A0S7JP25_9TELE5.220e-6240.07POLX n=2 Tax=Poeciliopsis prolifica TaxID=188132 R... [more]
A0A7D9M6E1_PARCT2.190e-6136.21Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6D2JBX5_9BRAS7.730e-6038.39Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6S7HNY1_PARCT1.030e-5938.94Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A401H4R8_9APHY1.990e-5939.54Uncharacterized protein n=2 Tax=Sparassis crispa T... [more]
A0A4Y9ZY34_9AGAM2.140e-5939.34Integrase catalytic domain-containing protein n=1 ... [more]
A0A0C9VSW1_SPHS44.920e-5939.60Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A4Y9ZJA2_9AGAM1.240e-5839.87Integrase catalytic domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig39738contigH-paniculata_contig39738:723..1700 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeArthropoda
Seed ortholog score204.9
Seed ortholog evalue5.4e-50
Seed eggNOG ortholog7029.ACYPI24114-PA
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Reverse transcriptase (RNA-dependent DNA polymerase)
EggNOG OGs38DPC@33154,3BI7U@33208,3CTS1@33213,3SQRW@50557,41WYJ@6656,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelInsecta
Best eggNOG OGNA|NA|NA
Exons2
Model size933
Cds size933
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930216.0731468-CDS-H-paniculata_contig39738:722..13881622930216.0731468-CDS-H-paniculata_contig39738:722..1388Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig39738 723..1388 -
1691481195.085998-CDS-H-paniculata_contig39738:722..13881691481195.085998-CDS-H-paniculata_contig39738:722..1388Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig39738 723..1388 -
1622930216.0896382-CDS-H-paniculata_contig39738:1433..17001622930216.0896382-CDS-H-paniculata_contig39738:1433..1700Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig39738 1434..1700 -
1691481195.0966618-CDS-H-paniculata_contig39738:1433..17001691481195.0966618-CDS-H-paniculata_contig39738:1433..1700Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig39738 1434..1700 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig39738.10305.1prot_H-paniculata_contig39738.10305.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig39738 723..1700 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig39738.10305.1

>prot_H-paniculata_contig39738.10305.1 ID=prot_H-paniculata_contig39738.10305.1|Name=mRNA_H-paniculata_contig39738.10305.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=311bp
GETNLLVAVYVDDVVIAGRREKVDEFKHNISQRFRMKDLGSLSRVLGIEV
RRDRPNGTITISQGSYIREVLKRYGFDECRGVPTPAEGNKSLGAVPSDKG
AGVQENSRGRSGNSSEYRGMVGSFVHASTGTRPDITYAVHQAARRMEGPC
REDFSTGKRIFCCLSTVPDLGITFGGKSNGHGLEGFVDADWAEGVEDRKS
TTGYVFKLKDGAISWCSRKQQVTTWSSTEAEYVAAGEARKEAVYLRELLG
SIGLGCRGRPTLFEDNKSAINVSKGSGSHCRTKHIGVRWHGIREWIREGI
LALKYVGYDR*
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mRNA from alignment at H-paniculata_contig39738:723..1700-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig39738.10305.1 ID=mRNA_H-paniculata_contig39738.10305.1|Name=mRNA_H-paniculata_contig39738.10305.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=978bp|location=Sequence derived from alignment at H-paniculata_contig39738:723..1700- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGAGAAACAAACCTTCTGGTGGCCGTGTATGTTGACGACGTGGTCATTGC TGGCCGTCGTGAGAAAGTAGACGAGTTCAAGCATAACATAAGTCAGCGTT TTAGGATGAAAGACTTGGGCTCTCTCTCGCGCGTGTTGGGAATAGAAGTA CGACGTGACCGCCCCAATGGTACCATAACCATCTCGCAGGGTAGCTATAT CCGCGAGGTACTAAAAAGATACGGTTTTGACGAGTGTCGAGGAGTACCCA CCCCTGCAGAGGGAAACGTGAAGATTTTGGCACCCAAGTCGGCCGACAAG CCCTCCGAATAGAAGTCACTTGGAGCTGTACCATCGGACAAAGGCGCAGG AGTACAAGAAAACAGCAGAGGGAGAAGTGGTAATTCATCTGAATACAGAG GCATGGTAGGATCATTCGTGCACGCCTCGACAGGAACTAGACCTGATATA ACATATGCGGTACACCAAGCTGCACGTCGTATGGAGGGCCCATGTCGGGA AGACTTCAGTACAGGAAAGCGCATTTTTTGTTGTCTCAGTACTGTGCCTG ACCTCGGCATTACGTTCGGCGGTAAGAGTAATGGTCACGGTCTGGAAGGA TTCGTTGATGCCGATTGGGCGGAAGGTGTCGAGGACCGAAAGTCCACAAC AGGATACGTTTTCAAGCTGAAGGATGGTGCGATAAGTTGGTGCTCTAGGA AGCAACAGGTAACCACGTGGTCCAGTACAGAGGCAGAGTACGTTGCTGCA GGAGAAGCGAGAAAGGAAGCGGTATATCTTAGGGAGTTACTAGGATCGAT AGGTCTCGGATGCAGGGGGAGACCGACATTGTTTGAGGACAATAAATCAG CTATTAATGTCAGTAAGGGATCTGGCTCACACTGCAGGACAAAACACATC GGAGTGCGCTGGCACGGAATTCGAGAGTGGATTCGGGAAGGAATATTGGC ATTGAAATATGTTGGGTATGATCGATAA
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Coding sequence (CDS) from alignment at H-paniculata_contig39738:723..1700-

>mRNA_H-paniculata_contig39738.10305.1 ID=mRNA_H-paniculata_contig39738.10305.1|Name=mRNA_H-paniculata_contig39738.10305.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1866bp|location=Sequence derived from alignment at H-paniculata_contig39738:723..1700- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGAGAAACAAACCTTCTGGTGGCCGTGTATGTTGACGACGTGGTCATTGC
TGGCCGTCGTGAGAAAGTAGACGAGTTCAAGCATAACATAAGTCAGCGTT
TTAGGATGAAAGACTTGGGCTCTCTCTCGCGCGTGTTGGGAATAGAAGTA
CGACGTGACCGCCCCAATGGTACCATAACCATCTCGCAGGGTAGCTATAT
CCGCGAGGTACTAAAAAGATACGGTTTTGACGAGTGTCGAGGAGTACCCA
CCCCTGCAGAGGGAAACGGAGAAACAAACCTTCTGGTGGCCGTGTATGTT
GACGACGTGGTCATTGCTGGCCGTCGTGAGAAAGTAGACGAGTTCAAGCA
TAACATAAGTCAGCGTTTTAGGATGAAAGACTTGGGCTCTCTCTCGCGCG
TGTTGGGAATAGAAGTACGACGTGACCGCCCCAATGGTACCATAACCATC
TCGCAGGGTAGCTATATCCGCGAGGTACTAAAAAGATACGGTTTTGACGA
GTGTCGAGGAGTACCCACCCCTGCAGAGGGAAACAAGTCACTTGGAGCTG
TACCATCGGACAAAGGCGCAGGAGTACAAGAAAACAGCAGAGGGAGAAGT
GGTAATTCATCTGAATACAGAGGCATGGTAGGATCATTCGTGCACGCCTC
GACAGGAACTAGACCTGATATAACATATGCGGTACACCAAGCTGCACGTC
GTATGGAGGGCCCATGTCGGGAAGACTTCAGTACAGGAAAGCGCATTTTT
TGTTGTCTCAGTACTGTGCCTGACCTCGGCATTACGTTCGGCGGTAAGAG
TAATGGTCACGGTCTGGAAGGATTCGTTGATGCCGATTGGGCGGAAGGTG
TCGAGGACCGAAAGTCCACAACAGGATACGTTTTCAAGCTGAAGGATGGT
GCGATAAGTTGGTGCTCTAGGAAGCAACAGGTAACCACGTGGTCCAGTAC
AGAGGCAGAGTACGTTGCTGCAGGAGAAGCGAGAAAGGAAGCGGTATATC
TTAGGGAGTTACTAGGATCGATAGGTCTCGGATGCAGGGGGAGACCGACA
TTGTTTGAGGACAATAAATCAGCTATTAATGTCAGTAAGGGATCTGGCTC
ACACTGCAGGACAAAACACATCGGAGTGCGCTGGCACGGAATTCGAGAGT
GGATTCGGGAAGGAATATTGGCATTGAAATATGTTGGGTATGATCGATAA
AAGTCACTTGGAGCTGTACCATCGGACAAAGGCGCAGGAGTACAAGAAAA
CAGCAGAGGGAGAAGTGGTAATTCATCTGAATACAGAGGCATGGTAGGAT
CATTCGTGCACGCCTCGACAGGAACTAGACCTGATATAACATATGCGGTA
CACCAAGCTGCACGTCGTATGGAGGGCCCATGTCGGGAAGACTTCAGTAC
AGGAAAGCGCATTTTTTGTTGTCTCAGTACTGTGCCTGACCTCGGCATTA
CGTTCGGCGGTAAGAGTAATGGTCACGGTCTGGAAGGATTCGTTGATGCC
GATTGGGCGGAAGGTGTCGAGGACCGAAAGTCCACAACAGGATACGTTTT
CAAGCTGAAGGATGGTGCGATAAGTTGGTGCTCTAGGAAGCAACAGGTAA
CCACGTGGTCCAGTACAGAGGCAGAGTACGTTGCTGCAGGAGAAGCGAGA
AAGGAAGCGGTATATCTTAGGGAGTTACTAGGATCGATAGGTCTCGGATG
CAGGGGGAGACCGACATTGTTTGAGGACAATAAATCAGCTATTAATGTCA
GTAAGGGATCTGGCTCACACTGCAGGACAAAACACATCGGAGTGCGCTGG
CACGGAATTCGAGAGTGGATTCGGGAAGGAATATTGGCATTGAAATATGT
TGGGTATGATCGATAA
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