mRNA_H-paniculata_contig3971.10303.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig3971.10303.1
Unique NamemRNA_H-paniculata_contig3971.10303.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig3971.10303.1 vs. uniprot
Match: D8LS99_ECTSI (NPL4 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS99_ECTSI)

HSP 1 Score: 573 bits (1478), Expect = 5.920e-197
Identity = 275/314 (87.58%), Postives = 294/314 (93.63%), Query Frame = 1 
Query:    1 SMKMKWTLADFTEMNEQFTFRIAKPEKGVCQGVSLDSTACNSFQGYVRQFGFHRARMGYLYGSYTEED-KVRVECVYEPPQENFPQGFEVSEDLREDAVETLAGLLGLKKVGWIFAHPPREEGFLFSSAEVITAATLQLEAADGVNDTPFVTVKVTAEADGNAHFDAFQVSKQCMEMVAEGALEVGENPGHCMVSTTFTAIVEMKEAKEVDATMFLNTVPIEQHESARFVHDFPRANREGVMQMWDDVKRQLGRAGGQGFTYIDLLSDFHLLFFLTTFLDMQTDMPKICASVVDREKPLDDGFKLLINNFAGID 939
            SMKMKWTLADFTEMN+QFTFR+ KPEKGVC  VSLDS ACNSFQ +VRQFGFHRARMGYLYG +T++D KVRVECVYEPPQEN+P+GF+VSED + D VE LAGLLGLK+VGWIFAHPPREEGFLFSSAEV+TAATLQLEAADGVNDTPFVTVKVTAE DG+AHFDAFQVSKQCMEMVAEGALEVGENPGHCMV  TFTAIVEMKEAKEVD TMFLNTVPIEQHESA+F+HDFPRANR+GVMQ WDDVKRQLGRAGGQGFTY+D+LSDFHLL FLT FLDMQTDMPKIC SVVDREKPLDDGFK LINNFAG+D
Sbjct:  127 SMKMKWTLADFTEMNDQFTFRLKKPEKGVCTKVSLDSAACNSFQSFVRQFGFHRARMGYLYGHFTDDDTKVRVECVYEPPQENYPEGFQVSEDPKADTVEALAGLLGLKRVGWIFAHPPREEGFLFSSAEVVTAATLQLEAADGVNDTPFVTVKVTAEEDGSAHFDAFQVSKQCMEMVAEGALEVGENPGHCMVPKTFTAIVEMKEAKEVDTTMFLNTVPIEQHESAKFLHDFPRANRDGVMQTWDDVKRQLGRAGGQGFTYMDVLSDFHLLLFLTAFLDMQTDMPKICDSVVDREKPLDDGFKFLINNFAGLD 440
[Close]
BLAST of mRNA_H-paniculata_contig3971.10303.1 vs. uniprot
Match: A0A835YRM2_9STRA (NPL4 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRM2_9STRA)

HSP 1 Score: 438 bits (1126), Expect = 6.080e-144
Identity = 210/315 (66.67%), Postives = 249/315 (79.05%), Query Frame = 1 
Query:    1 SMKMKWTLADFTEMNEQFTFRIAKPEKGVCQGVSLDSTACNSFQGYVRQFGFHRARMGYLYGSY-TEEDKVRVECVYEPPQENFPQGFEVSEDLREDAVETLAGLLGLKKVGWIFAHPPREEGFLFSSAEVITAATLQLEAADGVNDTPFVTVKVTAEADGNAHFDAFQVSKQCMEMVAEGALEVGENPGHCMVSTTFTAIVEMKEAKEVDATMFLNTVPIEQHESARFVHDFPRANREGVMQMWDDVKRQLGRAGGQGFTYIDLLSDFHLLFFLTTFLDMQTDMPKICASVVDREKPLDDGFKLLINNFAGIDG 942
            S+KMKWTL DF  M++QFTF++ + EK  C+GV+LD+T+C+SFQ YVRQFGFHRARM +LYG+  +E  KV+VEC+YEPPQEN P+GF + ED +E+ VE LA +LGL++VGW+FAHPPREEGF FSSAEVI AA LQL AA+GVN+ PF TVKVT + +G  HFDAFQVS QCMEM AEGALE+  NPG C V  +FTAIVE K   EVD   FL  VPIEQH S RFV  FP+ NREGV Q W DVK QL +AG QGFTYID+LSDF LL FLT FLDM+TDMPKIC SVVD   PLD+GFKL+IN+ AG++G
Sbjct:  125 SIKMKWTLNDFMAMDDQFTFKMKRQEKAYCEGVTLDTTSCDSFQSYVRQFGFHRARMAFLYGTIDSETKKVKVECIYEPPQENSPEGFVLMEDPKEETVENLAAMLGLQRVGWMFAHPPREEGFQFSSAEVIMAAELQLIAAEGVNEHPFATVKVTIDKEGAVHFDAFQVSTQCMEMAAEGALEISPNPGSCRVVDSFTAIVEAKSTPEVDNNFFLAVVPIEQHSSERFVAKFPQCNREGVAQTWADVKHQLSKAGSQGFTYIDMLSDFQLLLFLTQFLDMKTDMPKICQSVVDHSIPLDEGFKLIINHMAGVEG 439
[Close]
BLAST of mRNA_H-paniculata_contig3971.10303.1 vs. uniprot
Match: A0A6V1P552_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P552_HETAK)

HSP 1 Score: 404 bits (1038), Expect = 1.250e-130
Identity = 195/315 (61.90%), Postives = 244/315 (77.46%), Query Frame = 1 
Query:    1 SMKMKWTLADFTEMNEQFTFRIAKPEKGVCQGVSLDSTACNSFQGYVRQFGFHRARMGYLYGSYTEEDKVRVECVYEPPQENFPQGFEV--SEDLREDAVETLAGLLGLKKVGWIFAHPPREEGFLFSSAEVITAATLQLEAADGVNDTPFVTVKVTAEADGNAHFDAFQVSKQCMEMVAEGALEVGENPGHCMVSTTFTAIVEMKEAKEVDATMFLNTVPIEQHESARFVHDFPRANREGVMQMWDDVKRQLGRAGGQGFTYIDLLSDFHLLFFLTTFLDMQTDMPKICASVVDREKPLDDGFKLLINNFAGID 939
            SMKM+WTL DF  +++QFT+++ +  + VC+GVSLDS  C  FQ Y+ QF F ++RMGYLYG + E+ KV VE  YEPPQE  P+GFE+    D  E  V  LA LL L++VGWIF+HPPRE+GFLFS+ EV+TAA LQLEAA+GVNDTPFVTVKVT + +GN+HFDA+QVS+QCMEM AEGALE  E+PG C V  TFTA+VE KEAKEVD T FL  VPIEQHES R V  FP ANR GV+Q  DD+K QL +AG  G+T++D+L DF LL FLT FLD++TD+P+IC SV+D+  PLD+GFKL+I++ AG+D
Sbjct:  132 SMKMQWTLTDFQLLDDQFTYKVKRQAEAVCKGVSLDSATCGGFQAYLHQFAFQQSRMGYLYGRWGEDGKVVVEACYEPPQEGSPEGFELPGDGDPAEARVAELARLLRLERVGWIFSHPPREDGFLFSNTEVLTAAELQLEAAEGVNDTPFVTVKVTLDDEGNSHFDAYQVSRQCMEMAAEGALEYHEDPGVCGVHETFTAVVEAKEAKEVDTTFFLCNVPIEQHESQRLVAQFPPANRPGVVQSNDDLKSQLSKAGTNGWTFVDMLGDFQLLLFLTNFLDIKTDVPRICESVLDKSIPLDEGFKLIISSLAGMD 446
[Close]
BLAST of mRNA_H-paniculata_contig3971.10303.1 vs. uniprot
Match: A0A7S0GK99_9STRA (Hypothetical protein n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GK99_9STRA)

HSP 1 Score: 366 bits (940), Expect = 8.440e-116
Identity = 182/318 (57.23%), Postives = 231/318 (72.64%), Query Frame = 1 
Query:    4 MKMKWTLADFTEMNEQFTFRIAKPEKGVCQGVSLDSTACNSFQGYVRQFGFHRARMGYLYGSYTEED-KVRVECVYEPPQENFP---QGFEVSEDLREDAVETLAGLLGLKKVGWIFAHPPREEGFLFSSAEVITAATLQLEAADGVNDTPFVTVKVTAEADGNAHFDAFQVSKQCMEMVAEGALEVGENPGHCMVSTTFTAIVEMKEAKEVDATMFLNTVPIEQHESARFVHDFPRANRE-GVMQMWDDVKRQLGRAGGQGFTYIDLLSDFHLLFFLTTFLDMQTDMPKICASVVDREKPLDDGFKLLINNFAGIDG 942
            MK  WTLA+F  M+ QF+F+I + E+   +G SLDS  C  FQ Y+R+F F R R GYLYGS  ++  KV+VEC+YEPPQE  P   +GF   ED  E+ VE LA +LGLK+VGWIF HPPRE+GF  +S+E++ AA LQLEAADGV  TPFVTVKV+   DGNA F+AFQVS QCM+MVAE ALE+GE PG C V+ TFTAI E K +K ++   FL  VPIEQH+S  F+  FP ANR+ G  Q  D++KRQL ++G QG+++IDLLSDF LL +L   LD  TDMPKIC S+ +RE PLD+G+K++I + AG+DG
Sbjct:  144 MKKSWTLAEFVHMDSQFSFKIKRQEEAWSKGCSLDSACCGGFQNYLREFNFSRQRFGYLYGSVDDDTMKVKVECIYEPPQEADPDSAEGFIALEDPNEEVVEQLAEMLGLKRVGWIFGHPPREKGFQMTSSEILMAAELQLEAADGVEKTPFVTVKVSVGEDGNASFEAFQVSLQCMQMVAEEALEIGEKPGFCNVNDTFTAIQEGKNSKTIENNFFLMLVPIEQHQSNTFICQFPEANRDHGRGQTHDEMKRQLSKSGSQGWSFIDLLSDFQLLIYLCKHLDFATDMPKICTSIKNREIPLDEGYKIIIASMAGMDG 461
[Close]
BLAST of mRNA_H-paniculata_contig3971.10303.1 vs. uniprot
Match: A0A6U4G094_9STRA (Hypothetical protein n=4 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4G094_9STRA)

HSP 1 Score: 356 bits (914), Expect = 2.890e-112
Identity = 174/315 (55.24%), Postives = 225/315 (71.43%), Query Frame = 1 
Query:    1 SMKMKWTLADFTEMNEQFTFRIAKPEKGVCQGVSLDSTACNSFQGYVRQFGFHRARMGYLYGSYTEEDKVRVECVYEPPQENFPQGFEVSEDLREDAVETLAGLLGLKKVGWIFAHPPREEGFLFSSAEVITAATLQLEAADGVNDTPFVTVKVTAEADGNAHFDAFQVSKQCMEMVAEGALEVGENPGHCMVSTTFTAIVEMKEAKEVDATMFLNTVPIEQHESARFVHDFPRANRE--GVMQMWDDVKRQLGRAGGQGFTYIDLLSDFHLLFFLTTFLDMQTDMPKICASVVDREKPLDDGFKLLINNFAGID 939
            +MKM+WTL DF +M+ +F F++ + E   C GV +++     FQ  +RQ  F + R+GYLYG++T+++KV+V+C+YEPPQ       E+ ED RED VE LA LLGL++VGWIF HPPREEGF F+S EV  AA  QLEAA G+ DTPFVT+KVT  A+G A  + FQVSKQCMEMVAEGALE+GENPG C V+ TFTAIVE KEAKEV+   FL  V I Q+E+   V+ FP ANRE  G  Q   D++ Q+  AG QG++ +D L+DFHLL FL   LD+ TD+P++  S+ DR  PLDDGFK+L+N  AGI+
Sbjct:  125 AMKMQWTLTDFLDMDARFVFKMKRQEDAACAGVDMETNVARDFQQALRQTAFQQCRVGYLYGTFTDDNKVKVKCLYEPPQRGTAVDVELLEDPREDTVEKLAALLGLRRVGWIFGHPPREEGFHFASPEVFMAAEQQLEAAGGIGDTPFVTIKVTCNAEGLASVEGFQVSKQCMEMVAEGALEIGENPGDCAVNETFTAIVEGKEAKEVNNNFFLINVAISQYEADDMVYSFPVANREELGTTQGQPDLRAQIESAGKQGWSLVDRLADFHLLLFLCNTLDLDTDIPRLVESIKDRSVPLDDGFKILLNCLAGIE 439
[Close]
BLAST of mRNA_H-paniculata_contig3971.10303.1 vs. uniprot
Match: A0A7S4JEK5_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JEK5_9STRA)

HSP 1 Score: 356 bits (914), Expect = 1.670e-111
Identity = 187/341 (54.84%), Postives = 232/341 (68.04%), Query Frame = 1 
Query:    4 MKMKWTLADFTEMNEQFTFRIAKPEKGVCQ--GVSLDSTACNSFQGYVRQFGFHRARMGYLYGSYTEED---------------------KVRVECVYEPPQENFP---QGFEVSEDLREDAVETLAGLLGLKKVGWIFAHPPREEGFLFSSAEVITAATLQLEAADGVNDTPFVTVKVTAEADGNAHFDAFQVSKQCMEMVAEGALEVGENPGHCMVSTTFTAIVEMKEAKEVDATMFLNTVPIEQHESARFVHDFPRANRE--GVMQMWDDVKRQLGRAGGQGFTYIDLLSDFHLLFFLTTFLDMQTDMPKICASVVDREKPLDDGFKLLINNFAGIDG 942
            MKM WTL +F +M+ QFTF+I + E+      GVSLD+ + N FQGY+R+F F R R G+LYG + +E+                     KV VE +YEPPQE  P   +GF V +D  E+ VE LA +LGL++VGWIF HPPREEGF  S+AEVI AA LQLEAA GV  TPFVTVKVT   DGN  F+AFQVS+QCMEMVAE AL+VG NPG C VS TFTAI E K +K V+   FL  VPI QH S  FV  FPR NR+     Q  +++KRQL ++G  G+T++DLLSDF+LL +L  FLD  TDMPKIC SVV+R+ PLDDG+K++I + AG+DG
Sbjct:  153 MKMSWTLQEFMDMDNQFTFKIQRQEESWVGKGGVSLDTDSANDFQGYLRRFNFQRNRFGFLYGRFVDEEVDEKDKPKKMDDRAAEPPKNQKVIVEAIYEPPQEADPDAAEGFRVLDDDDEETVENLASMLGLRRVGWIFGHPPREEGFQLSAAEVIMAAELQLEAAGGVEPTPFVTVKVTVGDDGNVSFEAFQVSRQCMEMVAEEALQVGPNPGFCGVSDTFTAIQEGKNSKTVENNFFLTVVPIVQHASETFVSQFPRPNRDHDDRTQSHEEMKRQLSKSGSAGWTFVDLLSDFNLLLYLCKFLDAATDMPKICESVVNRDVPLDDGYKIIITSMAGMDG 493
[Close]
BLAST of mRNA_H-paniculata_contig3971.10303.1 vs. uniprot
Match: A0A7S4QJ61_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QJ61_9STRA)

HSP 1 Score: 352 bits (903), Expect = 7.010e-111
Identity = 189/342 (55.26%), Postives = 229/342 (66.96%), Query Frame = 1 
Query:    1 SMKMKWTLADFTEMNEQFTFRIAKPEKGVC--QGVSLDSTACNSFQGYVRQFGFHRARMGYLYGSYTEE-------------------------DKVRVECVYEPPQENFP---QGFEVSEDLREDAVETLAGLLGLKKVGWIFAHPPREEGFLFSSAEVITAATLQLEAADGVNDTPFVTVKVTAEADGNAHFDAFQVSKQCMEMVAEGALEVGENPGHCMVSTTFTAIVEMKEAKEVDATMFLNTVPIEQHESARFVHDFPRANRE--GVMQMWDDVKRQLGRAGGQGFTYIDLLSDFHLLFFLTTFLDMQTDMPKICASVVDREKPLDDGFKLLINNFA 930
            SMKM WTL +F +M+ QF F+I + E+     +GVSLD+ + N FQ Y+R+F F R R GYLYG + +E                          KV VE +YEPPQE  P   +GF + ED  ED VE LA LLGLK+VGWIF HPPREEGF  S+AEVI AA LQLEAADGV  TPFVTVKVT   DGN  F+AFQVS+QCMEMVAE ALEVG NPG C V+ TFTAI E K +K V+   FL  VPI QH S  FV  FP+ANR+     Q  D++KRQL ++G  G+T+IDLLSDF LL +L  FLD+ TD+PKIC SVV+R+ PLDDG+K++I + A
Sbjct:   80 SMKMHWTLQEFVDMDSQFEFKIKRQEESWVGKEGVSLDTPSANDFQSYLRRFNFQRQRFGYLYGKFVDEXXXXXXXXXXXXXXXXXXXXXXXXNSKVVVEAIYEPPQEADPKAAEGFVMLEDPFEDQVENLASLLGLKRVGWIFGHPPREEGFQLSAAEVIMAAELQLEAADGVEQTPFVTVKVTVGDDGNVSFEAFQVSRQCMEMVAEQALEVGPNPGFCYVNETFTAIQEGKASKTVENNFFLTVVPIVQHVSDVFVTQFPKANRDHDDRTQSHDEMKRQLSKSGSSGWTFIDLLSDFSLLLYLCQFLDVNTDIPKICDSVVNRDVPLDDGYKIIIASLA 421
[Close]
BLAST of mRNA_H-paniculata_contig3971.10303.1 vs. uniprot
Match: A0A7S2GWV2_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2GWV2_9STRA)

HSP 1 Score: 353 bits (906), Expect = 2.340e-110
Identity = 188/351 (53.56%), Postives = 233/351 (66.38%), Query Frame = 1 
Query:    1 SMKMKWTLADFTEMNEQFTFRIAKPEKGVCQ--GVSLDSTACNSFQGYVRQFGFHRARMGYLYGSYTEED------------------------------KVRVECVYEPPQENFP---QGFEVSEDLREDAVETLAGLLGLKKVGWIFAHPPREEGFLFSSAEVITAATLQLEAADGVNDTPFVTVKVTAEADGNAHFDAFQVSKQCMEMVAEGALEVGENPGHCMVSTTFTAIVEMKEAKEVDATMFLNTVPIEQHESARFVHDFPRANRE--GVMQMWDDVKRQLGRAGGQGFTYIDLLSDFHLLFFLTTFLDMQTDMPKICASVVDREKPLDDGFKLLINNFAGIDG 942
            +MKM WTL +F +M+ QF F+I + E+      GVS+DS + N FQ Y+R+F F R R G+LYG + +ED                              KV VE +YEPPQE  P   +GF + +D  ED VE LA LLGL+KVGWIF HPPREEGF  S+AEVI AA LQLEAA GV  TPFVTVKVT   DGN  F+AFQVS+QCMEMVAE ALE+G NPG C V+ TFTAI E K +K V+   FL  VPI QH S  FV  FP+ANR+     Q  D++KRQL ++G  G+T+IDLLSDF LL +L  FLD+ TD+PKIC SVV+R+ PLDDG+K++I++ AG+DG
Sbjct:  140 AMKMHWTLQEFVDMDSQFEFKIKRQEESWVGKGGVSVDSPSANDFQSYLRRFNFQRQRFGFLYGKFVDEDDEDGXXXXXDSSKMDFSSGEKXXXXXXXNQKVVVEAIYEPPQEADPDAAEGFVMLDDPFEDQVENLASLLGLRKVGWIFGHPPREEGFQLSAAEVIMAAELQLEAAGGVEQTPFVTVKVTVGDDGNVSFEAFQVSRQCMEMVAEQALEIGPNPGFCYVNETFTAIQEGKPSKTVENNFFLTVVPIVQHVSETFVTQFPKANRDHDDRTQSHDEMKRQLSKSGSSGWTFIDLLSDFALLLYLCQFLDVNTDIPKICDSVVNRDVPLDDGYKIIISSLAGMDG 490
[Close]
BLAST of mRNA_H-paniculata_contig3971.10303.1 vs. uniprot
Match: A0A7R9UGJ4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UGJ4_9STRA)

HSP 1 Score: 347 bits (890), Expect = 9.660e-109
Identity = 168/315 (53.33%), Postives = 224/315 (71.11%), Query Frame = 1 
Query:    1 SMKMKWTLADFTEMNEQFTFRIAKPEKGVCQGVSLDSTACNSFQGYVRQFGFHRARMGYLYGSYTEEDKVRVECVYEPPQENFPQGFEVSEDLREDAVETLAGLLGLKKVGWIFAHPPREEGFLFSSAEVITAATLQLEAADGVNDTPFVTVKVTAEADGNAHFDAFQVSKQCMEMVAEGALEVGENPGHCMVSTTFTAIVEMKEAKEVDATMFLNTVPIEQHESARFVHDFPRANRE--GVMQMWDDVKRQLGRAGGQGFTYIDLLSDFHLLFFLTTFLDMQTDMPKICASVVDREKPLDDGFKLLINNFAGID 939
            +MKM WTL DF +M+ +F +++ + E+G C+GV L +     FQ  +RQ  F + R+GYLYG +T++ +  V+ +YEPPQ       E+ ED R + V+ LAGLL ++KVGWIF HPPREEGF FSS EV  AA  QLEAA+GV DTPFVTVKVT +A+G A  + +QVSKQ MEMVAEGALE+GENPG C V+ TFTA+VE KEAK VD   FL  V I Q + +  V+ FP ANR+  G++Q   D++RQ+  AG QG++ ID L+DF LL +LT+ LD+ TD+P++C S+ DR  PLDDGFK+L+N  AG++
Sbjct:  122 AMKMHWTLTDFLDMDNRFVYKMKRQEEGACKGVELQTAVALDFQSVLRQTAFQQCRVGYLYGHFTDDGRAVVKALYEPPQRGTAIDVELHEDPRAEIVDKLAGLLNMQKVGWIFGHPPREEGFHFSSPEVFMAAEQQLEAAEGVGDTPFVTVKVTCDAEGRALVEGYQVSKQAMEMVAEGALEIGENPGECAVNETFTALVEAKEAKAVDNNFFLINVAITQTDESDLVYSFPVANRDDLGILQTQQDLRRQIESAGKQGWSLIDRLADFQLLLYLTSALDVDTDIPRLCESIKDRSVPLDDGFKILLNCLAGLE 436
[Close]
BLAST of mRNA_H-paniculata_contig3971.10303.1 vs. uniprot
Match: A0A7S1YWR5_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YWR5_TRICV)

HSP 1 Score: 344 bits (882), Expect = 5.520e-108
Identity = 182/343 (53.06%), Postives = 229/343 (66.76%), Query Frame = 1 
Query:    4 MKMKWTLADFTEMNEQFTFRIAKPEKGVCQ--GVSLDSTACNSFQGYVRQFGFHRARMGYLYGSYTEED----------------------KVRVECVYEPPQENFPQ---GFEVSEDLREDAVETLAGLLGLKKVGWIFAHPPREEGFLFSSAEVITAATLQLEAADGVNDTPFVTVKVTAEADGNAHFDAFQVSKQCMEMVAEGALEVGENPGHCMVSTTFTAIVEMKEAKEVDATMFLNTVPIEQHESARFVHDFPRANRE--GVMQMWDDVKRQLGRAGG-QGFTYIDLLSDFHLLFFLTTFLDMQTDMPKICASVVDREKPLDDGFKLLINNFAGIDG 942
            MKM+WTL +F +M+ Q+ F+I + E+      G SL++ + + FQGY+R+F F R R G+LYG + +E+                      +V VE +YEPPQE  P+   GF V ED  E+ V+ LA LLGL KVGWIF HPPREEGF  S+AEVI AA  QLE+A G   TPFVTVKVT   DGNA F+AFQVS+QCMEMVAE AL+VG NPG C V+ TFTAI E K +K V+   FL  VPI QH S  FV  FPR NR+     Q  D++KRQL +AGG +G+T++DLLSDF+LL +L  FLD+ TD+PKIC SV DR  PLDDG+K++I   AG+DG
Sbjct:   61 MKMRWTLQEFVDMDSQYEFKIKRQEESWVGKGGCSLETASADDFQGYLRRFNFQRNRFGFLYGKFVDEEIDPEKEKAAKRDDGEPDPPKNKQVIVEAIYEPPQEADPEAAEGFVVLEDPMEETVDKLAALLGLTKVGWIFGHPPREEGFQMSAAEVIMAAEFQLESAGGTEPTPFVTVKVTVGDDGNASFEAFQVSRQCMEMVAEEALDVGPNPGFCYVNETFTAIQEGKPSKTVENNFFLTVVPIVQHSSETFVSQFPRPNRDHDDRTQSHDEMKRQLAKAGGGRGWTFVDLLSDFNLLLYLCKFLDVATDLPKICESVADRSVPLDDGYKIIIAGMAGMDG 403
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3971.10303.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LS99_ECTSI5.920e-19787.58NPL4 domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A835YRM2_9STRA6.080e-14466.67NPL4 family-domain-containing protein n=1 Tax=Trib... [more]
A0A6V1P552_HETAK1.250e-13061.90Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S0GK99_9STRA8.440e-11657.23Hypothetical protein n=2 Tax=Proboscia inermis Tax... [more]
A0A6U4G094_9STRA2.890e-11255.24Hypothetical protein n=4 Tax=Phaeomonas parva TaxI... [more]
A0A7S4JEK5_9STRA1.670e-11154.84Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S4QJ61_9STRA7.010e-11155.26Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A7S2GWV2_9STRA2.340e-11053.56Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7R9UGJ4_9STRA9.660e-10953.33Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S1YWR5_TRICV5.520e-10853.06Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3971contigH-paniculata_contig3971:4752..15970 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score570.9
Seed ortholog evalue3.8e-160
Seed eggNOG ortholog2880.D8LS99
KEGG koko:K14015
KEGG Pathwayko04141,map04141
KEGG ModuleM00400,M00403
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005829,GO:0006508,GO:0006511,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010033,GO:0010243,GO:0010498,GO:0012505,GO:0016020,GO:0019538,GO:0019899,GO:0019941,GO:0030163,GO:0030433,GO:0031625,GO:0032182,GO:0033554,GO:0034976,GO:0036503,GO:0042175,GO:0042221,GO:0043130,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044389,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051603,GO:0051716,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901698
EggNOG free text desc.modification-dependent protein catabolic process
EggNOG OGsCOG5100@1,KOG2834@2759
COG Functional cat.Y
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002
Exons8
Model size2244
Cds size942
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3971.10303.1prot_H-paniculata_contig3971.10303.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig3971 4755..14671 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930215.7033453-UTR-H-paniculata_contig3971:4751..47541622930215.7033453-UTR-H-paniculata_contig3971:4751..4754Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3971 4752..4754 +
1691481194.9122036-UTR-H-paniculata_contig3971:4751..47541691481194.9122036-UTR-H-paniculata_contig3971:4751..4754Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3971 4752..4754 +
1622930215.8590465-UTR-H-paniculata_contig3971:14671..159701622930215.8590465-UTR-H-paniculata_contig3971:14671..15970Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3971 14672..15970 +
1691481195.0070093-UTR-H-paniculata_contig3971:14671..159701691481195.0070093-UTR-H-paniculata_contig3971:14671..15970Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3971 14672..15970 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930215.7281966-CDS-H-paniculata_contig3971:4754..49181622930215.7281966-CDS-H-paniculata_contig3971:4754..4918Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3971 4755..4918 +
1691481194.9259272-CDS-H-paniculata_contig3971:4754..49181691481194.9259272-CDS-H-paniculata_contig3971:4754..4918Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3971 4755..4918 +
1622930215.744823-CDS-H-paniculata_contig3971:6623..66631622930215.744823-CDS-H-paniculata_contig3971:6623..6663Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3971 6624..6663 +
1691481194.9356601-CDS-H-paniculata_contig3971:6623..66631691481194.9356601-CDS-H-paniculata_contig3971:6623..6663Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3971 6624..6663 +
1622930215.7570183-CDS-H-paniculata_contig3971:7846..79661622930215.7570183-CDS-H-paniculata_contig3971:7846..7966Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3971 7847..7966 +
1691481194.947708-CDS-H-paniculata_contig3971:7846..79661691481194.947708-CDS-H-paniculata_contig3971:7846..7966Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3971 7847..7966 +
1622930215.768936-CDS-H-paniculata_contig3971:8614..87461622930215.768936-CDS-H-paniculata_contig3971:8614..8746Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3971 8615..8746 +
1691481194.9593759-CDS-H-paniculata_contig3971:8614..87461691481194.9593759-CDS-H-paniculata_contig3971:8614..8746Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3971 8615..8746 +
1622930215.7821348-CDS-H-paniculata_contig3971:11207..113011622930215.7821348-CDS-H-paniculata_contig3971:11207..11301Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3971 11208..11301 +
1691481194.9706986-CDS-H-paniculata_contig3971:11207..113011691481194.9706986-CDS-H-paniculata_contig3971:11207..11301Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3971 11208..11301 +
1622930215.8003051-CDS-H-paniculata_contig3971:11848..119191622930215.8003051-CDS-H-paniculata_contig3971:11848..11919Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3971 11849..11919 +
1691481194.9799933-CDS-H-paniculata_contig3971:11848..119191691481194.9799933-CDS-H-paniculata_contig3971:11848..11919Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3971 11849..11919 +
1622930215.819883-CDS-H-paniculata_contig3971:12629..128451622930215.819883-CDS-H-paniculata_contig3971:12629..12845Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3971 12630..12845 +
1691481194.9891388-CDS-H-paniculata_contig3971:12629..128451691481194.9891388-CDS-H-paniculata_contig3971:12629..12845Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3971 12630..12845 +
1622930215.8417256-CDS-H-paniculata_contig3971:14566..146711622930215.8417256-CDS-H-paniculata_contig3971:14566..14671Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3971 14567..14671 +
1691481194.998134-CDS-H-paniculata_contig3971:14566..146711691481194.998134-CDS-H-paniculata_contig3971:14566..14671Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3971 14567..14671 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig3971.10303.1

>prot_H-paniculata_contig3971.10303.1 ID=prot_H-paniculata_contig3971.10303.1|Name=mRNA_H-paniculata_contig3971.10303.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=314bp
MKMKWTLADFTEMNEQFTFRIAKPEKGVCQGVSLDSTACNSFQGYVRQFG
FHRARMGYLYGSYTEEDKVRVECVYEPPQENFPQGFEVSEDLREDAVETL
AGLLGLKKVGWIFAHPPREEGFLFSSAEVITAATLQLEAADGVNDTPFVT
VKVTAEADGNAHFDAFQVSKQCMEMVAEGALEVGENPGHCMVSTTFTAIV
EMKEAKEVDATMFLNTVPIEQHESARFVHDFPRANREGVMQMWDDVKRQL
GRAGGQGFTYIDLLSDFHLLFFLTTFLDMQTDMPKICASVVDREKPLDDG
FKLLINNFAGIDG*
back to top

mRNA from alignment at H-paniculata_contig3971:4752..15970+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig3971.10303.1 ID=mRNA_H-paniculata_contig3971.10303.1|Name=mRNA_H-paniculata_contig3971.10303.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=11219bp|location=Sequence derived from alignment at H-paniculata_contig3971:4752..15970+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGCATGAAAATGAAGTGGACGTTGGCAGACTTCACGGAGATGAACGAGCA
GTTCACTTTCAGGATAGCAAAGCCAGAGAAGGGGGTGTGTCAGGGGGTCA
GTCTGGACTCGACGGCGTGCAACAGTTTCCAGGGCTACGTTCGGCAATTC
GGGTTCCACCGAGCCAGGTGAAATATTACGTACCCACAGTACAGTGGGTA
CAGTGGCGGGGGGGTGTTAAACGTGTGATTGTAAATTTGCATTAGGGCCA
CGTCAAAAACAGATATGTATCGATGATTGTACTACGAAAACAAAAGGGAG
CTATTCTGGGTATCTTAAAGCTGCTGGGTCACGTGTCCATGAATAAAATC
AATTGTTCTCACACCTATATTCACCCTCCCCCCCCCCCCCCCCCATCTTT
CACCCACCGAAATTTTAATTCCTAACTCAAGCCATTCACGTGCCAAGTAA
ACGTGGACCTTAGTTCTAACGCCCATGTGAAAAACCCCTATCGTACCTCA
TCTTGAAGTTATCTATGCAGCTGACCTCAAATTTCAGGTGTGTAAACTGA
TGTAGTATCATAAAAACAAATTGATCAATTACGGGGGGGGAATTGCCGTG
TAAATATATATATTTTGCTCGAACATACGTACGTCATGTCGGGGGAAAAT
AAGATCGTGTACGTATATACGTACTACGTACAAGGAAAACTCGAGGGCAT
TACAGTCAGGTTGATTTATTTGCCTTTCACCTCCCCCCTCATGCATAGAT
CATTACCATTGTTTTTGCATGCATGCCACATATGTCATCGCGAAGAGGAG
TACGTGTTAAGTTGGGTGTTTTTTGTTTAGGCACACGTTGATCTCGAAAA
AGAAGGCACACGCATGAAACTATCAGAAAACATAACGTACAATGCGATAG
GCGTCTCCATAAAAGGTACTCACCGTGATGCCAACGATCCGGTACAGGTA
TATATGGGGAGGAGCGTTCCTGGAGTTCCTGAATCCCGGTCCGCTGCAAA
ACGTTCCAGTACCATGCTTGTCCCATTTTTCGGAGCTGCCTTTTTGAGCT
GCTTCCGACCTTGGATGATGACCAGTTGATGCACCAACACAGTTATTGAG
TGCTTATATGCTTTATCATTGTGATGACTCTGAAATGCTCTTGTTTTTTC
GTACAAATTCTGCACTCAGCAAACCCATTTCAATCGCAGAAGGAATGCCA
ATATATATACATATATATATTTTTTTTAAAGTACGCTGCTGTACAATAGT
TACAGGAGTATGCGGGCATGGCGTTTACAAGTGTGTACCTTTTTTGGGCT
ACTCACAATATCAACTGAAGCGTAGGGGAAGGAAAAAATATATATATTTT
GTAATGGCAATGCAAACAAACCACGTCGTCAGCGAGCGCGGCACTCGCTT
TTGTGTCGTTGATGTTCAGATTGCCTCAATTTTCTTTAATTTACGAAAAA
AACCCCAAAACTGTCGTCCCTGTTGAGGGATCAGGATGCTGATATGATAA
CGCAGAATATCGACCGTCGGGAGGTTGGCACGGGATATTGTTTTGAATGT
TCTAGAGTCGGATCGTTCCGCGGTTTTGTTGCTTATTGGATGTTCAGGAG
CTGGAACGTCCCGCGAAGTATTTGGGAATTTCTAGAGCAAGATATTGTCC
ACGACATGGGAGGAGCACCGACCCCCTTTTGGTCTCACTCTCGTCTGCGC
ATCATAATATATGAAGAAAACTTATGTGTCTGCACTACTGTGTCACAAGC
CACAAGGATATGTACATATCTCAACAGTCCCCACTCTCACCCTGTGCTAC
CTACTTACCAACCATATCTCTCTTCCTCTCTCTCTCTCTCTCTCTATCTC
TCTTTATTTCTTCCTCTGCCAGAATGGGTTATCTGTACGGGTCGTATACG
GAGGAGGATAAGGTGAGATGATTTATCCAAGGTTTGTTCGTGTTGTGTAG
TGATGACCCTTTTTTGCTTATTTTATTTATTTTTATCTTGTTTTTGTTGT
TGACTATTTTGCTGACTTGAGAGCAGTTTTTTTTTTTGTCATTCACATTA
GCATAAATCGGATGTATTGCTGCAGGTTTTTCCTATTTAATGAAGAATGG
ACCGCGAATATGTATTTCCCTATTATTATTATTATTATTCACATTATTAT
TCACATTATTATTCACATTATTATTCACATTATTATTCACATTATTCACA
TTATTCACATTATTCACATTATTCACATTATTGTTCACATTATTCACATT
ATTCACATTATTCACATTATTATTCACATTATTCACATTATTATTCACAT
TATTATTGTTAAGAAAGAAGGATTGCCTTTAGAAGAACGGCCTTTCCCCT
CCTGCATTCATACGTGTACATATGTGCACATCTGCATGTTCGTGGACCTG
TGGACGCTGCTATCCGTCGCCGTGTGCTCCGAGTTTAAATGACATTGGCA
TCATCCAGAGGCGGTAGTGCGTAGAATCACATCCTAGCATGCCCGTCTCT
TTTATTGATTGTGCTGCAGGTAATCAAACCTTGAAAGAATTTCTGCTTCC
CTAATCAATCAGTTGTGATGTATCTGTTCAGTACTTGGCCGTTACCAAAA
ATGCGATTTTTTGTCTGTTTTCGCTCTGTACTGCTGTACATCCGAAACGA
AGAGTCTTGAAACGGCGGAAAAAAATAGGAAACTACCCTTGTTTTTGCAG
CCGAGATACACAAATTATCCAGTTCTCTAGAGCTGGTCAGGCATTCCGTC
GATCTATTTGTCATTGTTCATGATTGACCGGTTGTTAGCAAACAAATCTT
TCGTTTTTTTACCGTTACGAAGTGGGGTTCCTATTTGGAGGGTTGCAGAG
TTCAACGATGGTTGCATCGCAAAACGCTTTGGTGAATGTTACACACATTA
AAAGATACATATATGTACATATATATTCCGGATATCGAGCGCACCATCAT
ATACCATGACGAAAATATTCATGTGGGGCAATCGGTTGACGAGAAGGAGT
CATTGTCGCCTCGAAAACGAACCTTTAAGATAAACAGTGAGGAAGACAAA
GTTGTATTTCAATATATTTTTATTGTTGACTTTGGCTCTGGACAGGTAAG
AGTGGAGTGCGTGTACGAGCCACCGCAGGAAAACTTTCCCCAAGGATTTG
AGGTGTCGGAAGATCTAAGAGAAGACGCCGTCGAGACGTTGGCTGGATTA
CTGGGGCTCAAAAAGGTGTGTAGATCACTTTTTTTTTTCTTTTTTTTTCC
ATTTTTTTTTTTTCTTTTTCCTCTGTCTAGTGGTGACATGGTACGCCCGG
AGGTGGCGGGTGGGGATGGTCAAAACCCAAGGGGGGGCGGGTTTTTCTGA
TATATATATATATTTTTTTTTTCTGGTGTTGCCGCATGATTGGAAGCGTA
TCCGTACGTATGTCTCTCCAAGCACGTATGTCTCTCCAAGCACGGTAAGT
GCTGCGTGCAGGAAGGTGTTGAGCCACATGAGGAAATATGTTGGGATTTA
TGTTTATACCATATGTGTTTAGGAAACACGAGTGAAGCACTTGTTTCGTC
ATCGCACGAATTATTTTGTATTTTGTGACAAACCGACTGCTTTGCTCTCG
TCGCTCTTGTTTACTTAAGCTTTGTTTTGTTCACGGCCGGTGTGGAGATG
GATGCTGATTGATGCTTTTGCGTTTTTTTCTCTCTCTACCCCATAGTTGT
ATACTGTTTCTCTCGGAGTTTATGCGGGCAGCTGTATTCGTTCACAACAG
CTGCACGTGTCTCAACAGCTCCGAGGTGATGTAATCATGCTGGTTAGGTG
TTTCCAATCCCCCACCCTATCCCAACCCCAACCCTGGAATTCACGCCGAC
ACGCGGTAATAAGGTTGGCTGGATCTTCGCGCACCCGCCGAGAGAGGAAG
GGTTTCTGTTCAGCTCCGCGGAAGTGATCACAGCGGCAACTCTGCAGTTG
GAGGCTGCGGACGGGGTGAACGATACTCCCTTCGTAACGGTTAAGGTCAG
TGCTGGTGCTAGTGCTGGTGTTAGTTTTAAGTGTTACCCACTTTTGTAGC
GGCTGAAGCTAGGGTCAAATGGGGGGTCAAGCACCGTATGAAGTATTGTA
TGAGAGCCCACCAGACGTGATGATGATGATGATGATGATGATGATGAGGA
TGAGGATGAGGATGATGCAACATTCAAACCCAAAGATAACAAAAAAATAT
GATAGAAGCAACTATACTGAACAATATATTATTTACCATTTTATATCAGA
TCAAATTATTACAACGTTGAATAAAAAAAATATTAACCCACATAAAATGA
CAAAATTAATGAACTTAGATGCTAGCAAATAATGTGCGATTAATTTAATG
CTTTACACGTTACTAAATAGTTAAAAATCAAATGTTGAAATAATTTTTTT
TAATTAAGAATTAAAAAAATTAAAACAGTTAATAAAAAAAAACACCCAAA
AAAATACGAAAGAAAGCCAGCAAAATAAATAATAAAACCAGAGTCCCCTC
AGAAAAACGACATATCCCCATCAATTTTTCCCTTCGGACAATCACTACTT
GTACGCTGCACACTTAAAAAATACCTGGTCAAAAATTATGCAGGCGCTGT
TCGAGTATGATAACACACTCACGTCGACCTATCTGACCACTGGCTGGCTG
AATTGGCATCATTTTTGGGCGATCGCCTCGGCCCCAGAGTGTCGAGAGTG
TGGCAATAGTATGCCCATGTACAGTAGGTAAAATTAAGCCAGTTTTCGAG
AGCAGCACCCGTGTTCCGTCAGTGCTGTACAGATAGTGTGTATGTTGACA
CGATTTTTCTATGAATTTCCAGAATTCAGACAAAACGATATGCGCAGCCG
AAATCCAAATGAACATATAGATATTCGCTTCCATGTTGATGGGGACTCCA
TTTAGCTGATCCAAAATTCGTGGCGGCCAGATGACCTTTTGATGTAACTT
GGGCTATCGTTCAGTGCTGTTGTTGAGATGAAAAAATATATGCTGGTGTT
CTGGTCTAATGTGGTCTGTAGTAGTGCAGGAGTTCGAGTCTCGCCTACAG
GATGCCTCGTTTCTTGGTGCTTGTATAGATAGTTTCCTGCCTCAATTTTC
AATCAAACGGTCAGGACGGGATGGGACTTCCCCACATCTCTGTAGTGCAT
GCCCCCAGCTTGGAGAGCTGCAGGTGCGTGTGGCGACTCGACCACATGAT
GCCGAACATGCGGGTTTGTTTAGCGGGGTATCTTCTGGTTGATGACCAAT
GTCACGTCCCCTACCCCCGGTTCAGTAGAGGAGGCCGTCTTGTGCTTTTT
TTTTTTTTTTGTTTATTTTCTGTTTTATATGGGTTGGTTGCAGGACAGGT
GTGATGATAATGATGTATGCCTGGCACTTTTTATACCCGGCGGCTTCGCC
AGTCTGATGAGGAGAGGCCATACATACATACATACATACATACATACATA
CATACATACATACATACATACATACATACATACATACATACATACATACA
CACATACACACATACATATATGGAAGCGAGGGTAATTGTCTTTGACCGTC
ACTGTCCTTTAATGGAATTACTTAAATGGCTACCACCATGTTAGCCCACC
CTTTTTCAAGTCTTACTTGGGAAGACCTTCGTTTAGAAATAAGGGGAATT
GGACCGGTCCGCTGCGAAGTGTTACGATTTCTTTTCTTTAGATGTTTCTC
GAATGTGTCGCTTTCGTCGTCCGCCACCATAACTGCGATTTTATTGCTGG
GCGCTTGAGTTTTCTTTCGTTGTGTGTCAATGCTGAAGTTCGAACCTATC
ACCTTCAGGACGAGAAGCAGATCAGTTAATACGAAAATAAGGGTAACAGT
CCTCGACCCACGGACCTACGCCCGAATGGGTAGGGTAGCTCGTGAAGTGA
GCAGGACTGGAAGTCTTCGGAAATCGGGTCTTGGTACTTGTTATCTTGCC
GTGGGCTTAGGCTCCTTCCCTCACAACGCTTCCTAGTGGTGCATACAGAG
GGTGTACACTCTGGGGTGGAAAGGAAAGGACTGGAAGTCTAGTCAGAGGT
CTTTTAGTGGGTGCAACCCCCACACTGCCTACTTGGTTCGGCCGAACCGG
GGTGGCGCCTACCCCGCAGAGGAATAAATAACTCTGTCCTGTTTAAGGAA
ATGTAGAAATACTCAAGTGTGGAAGCAGCGGATAAAGGTTTTTGCCTTAG
CCTTCGGGAGGTTAAAAAAAAAAAACAGTCCTCGACACAGGTTGCGTGAT
TTTTTTTCTTTTTTTAACATCAACCGTACACATACCTACATAAAAGGAGT
GCATACCGTGCGAGACGTCGTGGGTAGGCATATCCCTTCTCATTTTGTTT
ACTTGCCGTACGTTGAACCTCTTCGCCGTTCTTGCTCTCGTCCTTCCACA
TTCCTACGACAATAAACTGTACTGTGTATTAATTTTACTTTGAACATATT
TGACAGGTGACGGCCGAGGCCGACGGGAACGCACACTTCGACGCCTTCCA
GGTGTCTAAGCAGTGCATGGAGATGGTGGCAGAAGGTGCCTTGGAAGTCG
GTAAGCCTAGCATCAATTATACACCTTTTGCTGTTTCGTTTTTTAAGTGT
TAAGGAGCCAACGATACCCCGCGTACTATATGCCGTTTTTTTTTTTTTAA
TTCTGAAAAAAACCATTTGGTCGTTACAAAAGATGCTCGTTGATTTGACC
GTTGTCGTTCCACACTGAACGCAAGATTTAATCAGACGGTCCTCCGTAGG
CAAGAAGAAATTACCCTCATGTTGCCGGCCCGAAATACCCTATATTATGA
CCAGAGCTAGTCTGCAAAGAGCTGTTCAGGATGAACTTTTTGTAGGTTAT
CGATGCGTTTGTTTATTGTCGTTCACGACGACTGGATCTCGACAGGAATT
TATTTATTTTTGCTTAGGAATAGGAATGGTTACCATGCTACCATACCTCA
AAGTACAAGACACCGAAGTCTGCAGTCTACGCTTCGCACACAATTTCCCG
CTTTTTGTTTTTTCGTTCCCTGTTCCCTCCTGGTATATACATACCATCGC
CGCTCTGTTTGCTTTAATTTCCTCCTTGCTCTGCCCCCGTTTTTCAGGAG
AAAACCCTGGACATTGCATGGTCTCCACGACGTTCACGGCAATCGTAGAG
ATGAAAGAGGCGAAGGAGGTGAATATGGAGAGGGGGGACCCGGGGGGTAG
GGGGGGTATTGATGTTGTCATGTTTTACGCTCCCTAGCTGCTTGGCCATC
TACGCACGCATTCTCGAGAGGACCAAAGCTTTGTTCCTGAGTTGGCTTAT
TTGTTTCTGCCTTTGCCAAACATAGTTCATTAGTAAAGATGTTGTTCGGA
GCCTTTTTGCAGCAACCCTCACCGTTGATGGCCATTTGTATCCCATCGTG
TTTCATCAATTTGATCAATACGTCGGTTGTACTTGGCTGTTTCCAGTCTC
ACGACTGTTGTTATCGTTGTTGTCGTGAAAGCCCCCCTGTCTGCTGGTAT
CATTTCGTCTGCCCGTGACAAAAAAAAATCTGATTTTGAATTACTACTTG
ATGATTTCAGAGTGGAGGAAATTTCTTCGCATGCCCTTTAGTCCTTTTTT
TTTTTTTTTTGAAGACCCGGAAAAGTATTGGGGCACGCTCTGGGAGGTTC
ACGGACGCGTAACAGACGCGCAACACTGCCCAATGCGGTGTCTTATTTTC
TTGTCATTTTGTTTCATGTTTTATGTGTTGATACGACGCAACTGACGAAA
CAAGCGTGTTTCTTTCTCTGCTTCCTTCCTTGCTTGCTCCCTTGCCTGCT
TGCTGCCGCGCCTGCTTGCTCCCTCACCTGCTTGCTTGTCCCTACTGAAA
ATAAAACAAAAACAAAAACAAAAACAAGGTGGACGCCACGATGTTTCTCA
ACACTGTCCCGATCGAGCAGCACGAGAGCGCACGCTTCGTACATGACTTC
CCGCGGGCGAACCGTGAGGGAGTGATGCAGATGTGGGACGACGTAAAGCG
GCAGCTGGGCAGAGCCGGAGGACAGGGCTTCACGTACATAGACCTCCTCT
CGGACTTCCACCTTCTCTTCTTCCTCACCACATTTTTGGACATGGTACGT
GCGTACACTTGGCGTGGGGGGCGAAAAGTGACTTGGCTACTTGGAGTCTA
ACCGCAAAATGAAAGAATTTTTTAGAATTTTGAGTTGTGGGGGGGGTTAA
GTCTGGGAACACGGTCACCTGGATAGCATAGCTCCCAAAAAAACGTTTGT
TCATCACTGGGTCGAACACGATGGTCGAGGTACACTAACTCAGCATAGTA
GCCAGAAAGTCATCAGAACGTTTCCGAGTAGTGCCCCCCAGACAGTTTTT
GCTCAAATCGGCGCCGCCAGGCGCCGATTTAAAGTCCGCCAACGCACAGT
GTGCTTCATGAGAATAGGATTAGGGTTAGAGTTACCATTAGTTCCAGCGT
TGGTCCTGCTCGCGTCCAGTCACCATTAAGCGTGAACCATTAAACAAAAC
AAAACAAAAAACTATCAATCGTCGTGTTTGACCCAGTGTGGTGATGAACA
GGACTTCAAAAAGCCGCACATGAGACAATGATCCAGTTCTTCATTCTTAT
CACTACCGAGTATTTTTGCCTCCATCAAATGCGTTTTTGCTGTGTAACAA
CCGGCCAGGTCGACTTGAGTCCGGAAACCACGATTCTTTATAACAAAAAA
AGTTAAAAAGAAGAAATCGTGCGACCTTTATCAAACAACGAAAATAATTA
CAAAAAAAAATCGCCATAAATCTGGTTTCTGGACTGAATTCGGCCTGAAG
GGTGTTACACATGAAGCACATTTGGTGGAGGGGCACAATATAGCCGACGA
GGGACCTGCGGGAAGAATTAGACGAACATGTTGAGTTCGGTTTTTGGGAA
TATTTCGCGTGGGTGACCCGCGGTCCCTCCCGAACTACCAGAACCGATAT
ATTGAAAAAGGAAAATTGCACGTTTTATGCCTGCAACACTCTTTCGGCAA
TTTCTGTTCATTCAGGAGCGACAATGTGTGTGTTACAAGCAAAGTTTCGT
TTCCATTTTGTACACTTGTCGATGTATTAAAAGACGGTTTTTAGTTCTTT
TGTTAATGCTATTACTTTTTTTGTCGCCGTGGTGTACACTTGCTTTATAT
ACAAGCCCATGTCATGATCCATGCGCTAACGGCTCGCTGTGCTCGCTTGG
TCGGTAATGAGCATAATAATGTCCATGAAGATTGGGTTTTGACAAATTAT
TACAGGGAGTTTTACAAGACTGTCCCGCTACGGTCGATCGTCATAGCCAC
TTTTTGGCATATTGTGAATGATAGGTGCACGGAAACGTGGTAGGCGAGTC
CGATTTGCTCAGTTTTTTTCCGTTGAGGAGGAATGAACGCTTTCTAAATA
CCCACGGCAGTTGCTGGTTGAAATTAACGCACCGAAGTTCACGGGGGGGG
GGGGGTTGATAGTTTTACGGTTATTGTCATGTTTTGCACAGTGATTTGTC
TACTTGTGCTACTTTTGACTCCCTTGTGAAGTCCACGGTACGCGTGCTCT
CGGCAGTGCAGGGTGTTGCTTGTTGGGAGAAACGAGCCTGAAAAAAAAGT
CTAGCTGACTAGCCAACTCTGTGTTCCCCGTGTGGAGCTTGACTTCGTGG
GTGCAGAGGGACATAGGCACGAAAATTGTCGCGTGTGTCGTGTGCTGTAC
TGTAGTTTTCTCGGTTACCCTGGCCGCTGTTCTGCCGCTGTTGTTTGGTT
GCTCTTGTGCGTGCTCACGGTGCCCTCTGCCACTTTCTTTTTTTCTTGTC
CCTCTTTTTTTTCAGCAAACGGACATGCCAAAGATTTGCGCGTCGGTGGT
TGACCGAGAGAAACCTTTGGACGATGGCTTCAAGTTGCTGATCAACAACT
TCGCCGGCATAGATGGTTAAAGGATAGACAGTCAAGAGAGAGAGGGACAA
AGAGAGACAAGGAAGGAAAGATCGCGAAAGAGCGAAACAACGAGACACAC
AGAGAGGGAGTACTCGTAGCAGTCTGAAGTCACGGTCGAATTTTTGTCGG
AAGCGTGTAGAAGAAAAAAAGAAACCAAAGCCGTGAAGCAACAACCAGGA
CATGCATCCATGTGGTGAAGGAGGTACTAAGTTGATGGCCGATGTGGCAT
CCAGTAGGATGATTGCTTGCGATAGATTGTCACAACCACGGTGGGGTTTT
GGTTATTTTGGTAATTGGCAAGCGGACATTTGTGAACTTGCTTGCTTATT
GCCAGTATAGGTTGAACAAAAGCCGTACGTGTGTGTTTTTGTGCTGTTTT
TTTCCCTGTTTTTTTTTTTACACTCACCAACACCTCCTTCCACCCAGATA
TTTTCGACACTTGCTTTTGTCCTTCAGGATCTCACGTAAAACGCACAGTA
GAGTGCTCTAGCGACCGTGGTGGCCGGACCTCGCTCCAAGTTAGGGGTTG
ATTGTTCTTTGTAGCTATATCTCCTGTGACTACTGGGCAAAAATGCCCGA
ATATTGGTACATGCGTCGAAGCAAATGTTTCAAACCTCTTCGGGAAAGAA
TCTCCGTGGATAGATCGACGTCCACCCGGCGTTAGCAGGTGTGAGGTAGG
GTAATGACGGCAGATTGCTTTGCCTTCACGGATGTGGCAGAGTGACTATG
GTGTGCGTTGATCGAATCATTTTTTTTTCAAACTGTGCTGTTTTTTACTT
GCGGTAGTAGTATCCATCCCGTCCTTGATACACGAAGTATATCAGTTATG
GATAGTAATGCGAGCCCACTATGGACGAATTGAATACAGATGTATCACCG
ACCGTGCGGGACAATCATCAATGGGACTACCTAGGGTAGTGATGATGGTG
GTGATATCAATAGATCGTTGACGAGTGATACGTGATGTACAAGAGCTCTT
GGGAGAGAGGGATCAGTTTGTCAACTTGAACCAAGTACCTACTGCAGCCT
CACGCGGTTGGTGTCCGTTAAATAATATATTGTAGTGCATTAGCTGTCAT
ATTTTCCTTTTTTCACGTGTGTTTGTATCCCTTCCCTGCCAAAATATATG
AAGATCCTTGAGGAGGGTGTCTGGCTGCAGCTGTCGTTATTTTTGCGAGC
ATGGATGGCGCAATCACGTAACAAGTAGGGCAGAGATGAACAGGGAATAG
CTTGTTTTCTCAATAGTCGATTAGTTTATTGCATCGTCTCACTTGCATTT
CGTTATGTGTACCGTCCTG
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig3971:4752..15970+

>mRNA_H-paniculata_contig3971.10303.1 ID=mRNA_H-paniculata_contig3971.10303.1|Name=mRNA_H-paniculata_contig3971.10303.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1884bp|location=Sequence derived from alignment at H-paniculata_contig3971:4752..15970+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAAATGAAGTGGACGTTGGCAGACTTCACGGAGATGAACGAGCAGTT
CACTTTCAGGATAGCAAAGCCAGAGAAGGGGGTGTGTCAGGGGGTCAGTC
TGGACTCGACGGCGTGCAACAGTTTCCAGGGCTACGTTCGGCAATTCGGG
TTCCACCGAGCCAGATGAAAATGAAGTGGACGTTGGCAGACTTCACGGAG
ATGAACGAGCAGTTCACTTTCAGGATAGCAAAGCCAGAGAAGGGGGTGTG
TCAGGGGGTCAGTCTGGACTCGACGGCGTGCAACAGTTTCCAGGGCTACG
TTCGGCAATTCGGGTTCCACCGAGCCAGAATGGGTTATCTGTACGGGTCG
TATACGGAGGAGGATAAGAATGGGTTATCTGTACGGGTCGTATACGGAGG
AGGATAAGGTAAGAGTGGAGTGCGTGTACGAGCCACCGCAGGAAAACTTT
CCCCAAGGATTTGAGGTGTCGGAAGATCTAAGAGAAGACGCCGTCGAGAC
GTTGGCTGGATTACTGGGGCTCAAAAAGGTAAGAGTGGAGTGCGTGTACG
AGCCACCGCAGGAAAACTTTCCCCAAGGATTTGAGGTGTCGGAAGATCTA
AGAGAAGACGCCGTCGAGACGTTGGCTGGATTACTGGGGCTCAAAAAGGT
TGGCTGGATCTTCGCGCACCCGCCGAGAGAGGAAGGGTTTCTGTTCAGCT
CCGCGGAAGTGATCACAGCGGCAACTCTGCAGTTGGAGGCTGCGGACGGG
GTGAACGATACTCCCTTCGTAACGGTTAAGGTTGGCTGGATCTTCGCGCA
CCCGCCGAGAGAGGAAGGGTTTCTGTTCAGCTCCGCGGAAGTGATCACAG
CGGCAACTCTGCAGTTGGAGGCTGCGGACGGGGTGAACGATACTCCCTTC
GTAACGGTTAAGGTGACGGCCGAGGCCGACGGGAACGCACACTTCGACGC
CTTCCAGGTGTCTAAGCAGTGCATGGAGATGGTGGCAGAAGGTGCCTTGG
AAGTCGGTGACGGCCGAGGCCGACGGGAACGCACACTTCGACGCCTTCCA
GGTGTCTAAGCAGTGCATGGAGATGGTGGCAGAAGGTGCCTTGGAAGTCG
GAGAAAACCCTGGACATTGCATGGTCTCCACGACGTTCACGGCAATCGTA
GAGATGAAAGAGGCGAAGGAGGAGAAAACCCTGGACATTGCATGGTCTCC
ACGACGTTCACGGCAATCGTAGAGATGAAAGAGGCGAAGGAGGTGGACGC
CACGATGTTTCTCAACACTGTCCCGATCGAGCAGCACGAGAGCGCACGCT
TCGTACATGACTTCCCGCGGGCGAACCGTGAGGGAGTGATGCAGATGTGG
GACGACGTAAAGCGGCAGCTGGGCAGAGCCGGAGGACAGGGCTTCACGTA
CATAGACCTCCTCTCGGACTTCCACCTTCTCTTCTTCCTCACCACATTTT
TGGACATGGTGGACGCCACGATGTTTCTCAACACTGTCCCGATCGAGCAG
CACGAGAGCGCACGCTTCGTACATGACTTCCCGCGGGCGAACCGTGAGGG
AGTGATGCAGATGTGGGACGACGTAAAGCGGCAGCTGGGCAGAGCCGGAG
GACAGGGCTTCACGTACATAGACCTCCTCTCGGACTTCCACCTTCTCTTC
TTCCTCACCACATTTTTGGACATGCAAACGGACATGCCAAAGATTTGCGC
GTCGGTGGTTGACCGAGAGAAACCTTTGGACGATGGCTTCAAGTTGCTGA
TCAACAACTTCGCCGGCATAGATGGTTAACAAACGGACATGCCAAAGATT
TGCGCGTCGGTGGTTGACCGAGAGAAACCTTTGGACGATGGCTTCAAGTT
GCTGATCAACAACTTCGCCGGCATAGATGGTTAA
back to top