mRNA_H-paniculata_contig3969.10292.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3969.10292.1 vs. uniprot
Match: D8LTT3_ECTSI (Eukaryotic translation initiation factor 4E-like 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTT3_ECTSI) HSP 1 Score: 253 bits (647), Expect = 3.260e-84 Identity = 114/137 (83.21%), Postives = 131/137 (95.62%), Query Frame = 1
Query: 1 SDADWGNNMQNLAEFSNVQDFWKVYNNIPKPSQVMFDGTMRKKVGDRQIDSFSIFKKGIRPEWEAPENAQGGEWQSRSKMSPQALDLFWENMVLGLVGETIDVGDEVCGARIVDKSKNHHVVYRFELWLRSNENSTA 411
S ADWG++MQ+LAEF+ V+DFWKVYNN+PKPSQVMFDG+MRKKVGDR IDS+SIFKKGI+PEWEAPEN+ GGEWQSRSKM+PQALDLFWENMVLGLVGET+DVGDE+CGAR+VDKSKN+H VYRFELWLRSN+ +TA
Sbjct: 26 SSADWGDSMQSLAEFATVEDFWKVYNNVPKPSQVMFDGSMRKKVGDRVIDSYSIFKKGIKPEWEAPENSHGGEWQSRSKMTPQALDLFWENMVLGLVGETVDVGDEICGARVVDKSKNNHNVYRFELWLRSNDGNTA 162
BLAST of mRNA_H-paniculata_contig3969.10292.1 vs. uniprot
Match: A0A835ZBP0_9STRA (Eukaryotic translation initiation factor 4E-like 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBP0_9STRA) HSP 1 Score: 202 bits (514), Expect = 5.350e-64 Identity = 89/135 (65.93%), Postives = 107/135 (79.26%), Query Frame = 1
Query: 7 ADWGNNMQNLAEFSNVQDFWKVYNNIPKPSQVMFDGTMRKKVGDRQIDSFSIFKKGIRPEWEAPENAQGGEWQSRSKMSPQALDLFWENMVLGLVGETIDVGDEVCGARIVDKSKNHHVVYRFELWLRSNENSTA 411
+DWG+NM +L EF+ V+DFW+ YNNIPKPSQV FDG RK+VGDRQI+SFSIFKKGIRPEWE P NA+GGEW R ++ P LD WE++VLGL+GETID DE+CGAR+VDKS+ YRFELWLR+ E T
Sbjct: 29 SDWGSNMTSLGEFNTVEDFWRFYNNIPKPSQVFFDGKSRKRVGDRQIESFSIFKKGIRPEWEDPANARGGEWSCRERLQPIVLDTLWESLVLGLIGETIDWADEICGARVVDKSRGKDTYYRFELWLRAREPGTT 163
BLAST of mRNA_H-paniculata_contig3969.10292.1 vs. uniprot
Match: A0A7S2XVT5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVT5_9STRA) HSP 1 Score: 169 bits (428), Expect = 5.670e-51 Identity = 72/131 (54.96%), Postives = 94/131 (71.76%), Query Frame = 1
Query: 7 ADWGNNMQNLAEFSNVQDFWKVYNNIPKPSQVMFDGTMRKKVGDRQIDSFSIFKKGIRPEWEAPENAQGGEWQSRSKMSPQALDLFWENMVLGLVGETIDVGDEVCGARIVDKSKNHHVVYRFELWLRSNE 399
DW NMQ + F+ V+DFW YN+IPKPS + +DG RK+VGDRQ++S SIFK+GI PEWE P NA+GGE+ R P LD WEN+++G++GETID D + GAR+VDKSK VY+ ELW++S E
Sbjct: 27 GDWAGNMQKICTFATVEDFWAYYNHIPKPSAIFYDGQTRKRVGDRQLESLSIFKEGINPEWEDPVNAKGGEFSCRKTFDPVTLDKLWENLLMGIIGETIDWADHISGARVVDKSKGTRAVYKLELWVKSKE 157
BLAST of mRNA_H-paniculata_contig3969.10292.1 vs. uniprot
Match: R1BIV2_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BIV2_EMIHU) HSP 1 Score: 160 bits (406), Expect = 1.090e-47 Identity = 67/130 (51.54%), Postives = 92/130 (70.77%), Query Frame = 1
Query: 22 NMQNLAEFSNVQDFWKVYNNIPKPSQVMFDGTMRKKVGDRQIDSFSIFKKGIRPEWEAPENAQGGEWQSRSKMSPQALDLFWENMVLGLVGETIDVGDEVCGARIVDKSKNHHVVYRFELWLRSNENSTA 411
NM L E + V+DFW+ +NNIPKPS++ +DG RKK R +++FS+FKK I+PEWE P N G EW R + LD FW ++VLG++GET+D GDE+CGAR+VDKS N +YR ELW R N+++ +
Sbjct: 31 NMAKLCEVATVEDFWRAWNNIPKPSEIFYDGRTRKKFASRTVEAFSVFKKNIKPEWEDPANRSGAEWYCRRAFTMPQLDEFWLHIVLGMIGETLDAGDEICGARVVDKSVNGRTMYRLELWFRKNDDALS 160
BLAST of mRNA_H-paniculata_contig3969.10292.1 vs. uniprot
Match: A0A7S2CNW6_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2CNW6_9EUKA) HSP 1 Score: 157 bits (398), Expect = 2.420e-46 Identity = 65/130 (50.00%), Postives = 91/130 (70.00%), Query Frame = 1
Query: 22 NMQNLAEFSNVQDFWKVYNNIPKPSQVMFDGTMRKKVGDRQIDSFSIFKKGIRPEWEAPENAQGGEWQSRSKMSPQALDLFWENMVLGLVGETIDVGDEVCGARIVDKSKNHHVVYRFELWLRSNENSTA 411
NM+ L E + ++DFW+ +NNIPKPS + +DG RKK +R ++SFS+FKK I+PEWE P N G EW R + Q LD FW ++VLG++GETID D++CGAR+VDKS +YR ELW + +++ A
Sbjct: 41 NMEKLCEVATIEDFWRAFNNIPKPSAIFYDGRTRKKFANRSVESFSLFKKNIKPEWEDPMNRSGAEWFCRKTFASQQLDEFWRDLVLGMIGETIDPADDICGARVVDKSSGTRQMYRLELWFKRKDDAVA 170
BLAST of mRNA_H-paniculata_contig3969.10292.1 vs. uniprot
Match: A0A7S3EX75_9EUKA (Hypothetical protein n=2 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3EX75_9EUKA) HSP 1 Score: 157 bits (397), Expect = 4.350e-46 Identity = 67/130 (51.54%), Postives = 88/130 (67.69%), Query Frame = 1
Query: 22 NMQNLAEFSNVQDFWKVYNNIPKPSQVMFDGTMRKKVGDRQIDSFSIFKKGIRPEWEAPENAQGGEWQSRSKMSPQALDLFWENMVLGLVGETIDVGDEVCGARIVDKSKNHHVVYRFELWLRSNENSTA 411
NM+ L E + V+DFW +NNIPKPSQ+ FDG +K+ +R ++SFS+FKK I+PEWE P N G EW R Q LD FW+N+ LG++GETID GDE+CGAR+VDK +YR ELW + + A
Sbjct: 49 NMEKLCEMATVEDFWCAWNNIPKPSQIFFDGKTKKRFANRSVESFSLFKKNIKPEWEDPANRAGAEWFCRRNFPMQQLDDFWQNLALGMIGETIDHGDEICGARVVDKCAGGRCMYRLELWFKKKDQGIA 178
BLAST of mRNA_H-paniculata_contig3969.10292.1 vs. uniprot
Match: A0A1V9ZKJ8_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZKJ8_9STRA) HSP 1 Score: 156 bits (395), Expect = 5.750e-46 Identity = 69/135 (51.11%), Postives = 95/135 (70.37%), Query Frame = 1
Query: 7 ADWGNNMQNLAEFSNVQDFWKVYNNIPKPSQVMFDGTMRKKVGDRQIDSFSIFKKGIRPEWEAPENAQGGEWQSRSKMSPQALDLFWENMVLGLVGETIDVGDEVCGARIVDKSKNHHVVYRFELWLRSNENSTA 411
++G+N+ L FS+V++FW +NNIPKPSQV+ DG +KK DR + SF++FK+GIRPEWE N GGEWQ ++ P LD W+ +VLG++GETID +E+ GAR+V K+K YRFELWLRS + + A
Sbjct: 23 GNYGDNLHRLCTFSSVEEFWGYWNNIPKPSQVLNDGIAKKKFSDRSVQSFAVFKEGIRPEWEDSANMNGGEWQLSIRLQPGPLDELWDKVVLGMIGETIDPTNEITGARVVHKNKKDTHTYRFELWLRSRDRNLA 157
BLAST of mRNA_H-paniculata_contig3969.10292.1 vs. uniprot
Match: A0A7S0HHF8_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HHF8_9EUKA) HSP 1 Score: 158 bits (399), Expect = 6.330e-46 Identity = 67/130 (51.54%), Postives = 90/130 (69.23%), Query Frame = 1
Query: 22 NMQNLAEFSNVQDFWKVYNNIPKPSQVMFDGTMRKKVGDRQIDSFSIFKKGIRPEWEAPENAQGGEWQSRSKMSPQALDLFWENMVLGLVGETIDVGDEVCGARIVDKSKNHHVVYRFELWLRSNENSTA 411
NM L EF+ ++DFW+++NNIPKPS + +DG +KK DR ++SFS+FKKG++PEWE N G EW R LD FW+++VLG+VGETID DE+CGAR+VDKS +YR ELW R + + A
Sbjct: 86 NMAKLCEFATIEDFWRLWNNIPKPSAIFYDGRTKKKFKDRTVESFSLFKKGVKPEWEDAANRTGAEWFCRKTFPMPQLDSFWQDLVLGMVGETIDPADEICGARVVDKSSGTRCMYRLELWFRKKDETIA 215
BLAST of mRNA_H-paniculata_contig3969.10292.1 vs. uniprot
Match: A0A067CVP5_SAPPC (Uncharacterized protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067CVP5_SAPPC) HSP 1 Score: 155 bits (393), Expect = 1.380e-45 Identity = 71/137 (51.82%), Postives = 95/137 (69.34%), Query Frame = 1
Query: 1 SDADWGNNMQNLAEFSNVQDFWKVYNNIPKPSQVMFDGTMRKKVGDRQIDSFSIFKKGIRPEWEAPENAQGGEWQSRSKMSPQALDLFWENMVLGLVGETIDVGDEVCGARIVDKSKNHHVVYRFELWLRSNENSTA 411
S +++G N+ L FS V++FW +NNIPKPSQV+ DG ++KK DR + SF++FK+GIRPEWE N GGEWQ K+ LD W+ +VLG++GETID +EV GAR+V K+K YRFELWLRS + + A
Sbjct: 26 SKSNYGENLHRLCTFSTVEEFWGYWNNIPKPSQVLNDGVVKKKFTDRSVQSFAVFKEGIRPEWEDSANMSGGEWQLSIKLQAGPLDELWDKLVLGMIGETIDPTNEVTGARVVHKNKKDSHSYRFELWLRSRDRNLA 162
BLAST of mRNA_H-paniculata_contig3969.10292.1 vs. uniprot
Match: A0A6G0XM37_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XM37_9STRA) HSP 1 Score: 154 bits (388), Expect = 6.620e-45 Identity = 68/135 (50.37%), Postives = 91/135 (67.41%), Query Frame = 1
Query: 7 ADWGNNMQNLAEFSNVQDFWKVYNNIPKPSQVMFDGTMRKKVGDRQIDSFSIFKKGIRPEWEAPENAQGGEWQSRSKMSPQALDLFWENMVLGLVGETIDVGDEVCGARIVDKSKNHHVVYRFELWLRSNENSTA 411
++ +N+ L F V++FW +NNIPKPSQV+FDG +KK DR + SF +FK GIRPEWE P N GGEWQ K+ LD W+ +VLG++GETID +E+ GAR++ K+K YRFELWLRS + + A
Sbjct: 23 GNYADNLHKLCTFGTVEEFWSYWNNIPKPSQVLFDGISKKKFVDRAVQSFCVFKDGIRPEWEDPVNITGGEWQISLKLQAAELDETWDKLVLGMIGETIDPDNEITGARVIHKNKKDTHAYRFELWLRSRDRNLA 157 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3969.10292.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3969.10292.1 >prot_H-paniculata_contig3969.10292.1 ID=prot_H-paniculata_contig3969.10292.1|Name=mRNA_H-paniculata_contig3969.10292.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=130bp MQNLAEFSNVQDFWKVYNNIPKPSQVMFDGTMRKKVGDRQIDSFSIFKKGback to top mRNA from alignment at H-paniculata_contig3969:720..2070- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3969.10292.1 ID=mRNA_H-paniculata_contig3969.10292.1|Name=mRNA_H-paniculata_contig3969.10292.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1351bp|location=Sequence derived from alignment at H-paniculata_contig3969:720..2070- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3969:720..2070- >mRNA_H-paniculata_contig3969.10292.1 ID=mRNA_H-paniculata_contig3969.10292.1|Name=mRNA_H-paniculata_contig3969.10292.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=780bp|location=Sequence derived from alignment at H-paniculata_contig3969:720..2070- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |