mRNA_H-paniculata_contig39602.10283.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig39602.10283.1 vs. uniprot
Match: A0A7S1B139_NOCSC (Hypothetical protein (Fragment) n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1B139_NOCSC) HSP 1 Score: 74.3 bits (181), Expect = 5.420e-13 Identity = 54/144 (37.50%), Postives = 75/144 (52.08%), Query Frame = 1
Query: 34 LRGSEVNAFLGKLQAWCPHEPCNLKLLYRASVDGFDASSFHAKCDRSTSTLTLVKVDSGRGCESIVGGYADTSWSQATATYPNNSSKGFIFSLKNGTDKINARDADDDMFPRAAKYPIDDRARQFAIICHATEGPRFG-NFDLW 462
L+ S + F L++W P E +LLYRA+ DGF+ASSFH +CD TL +V R + + GGY++ SWS +T++Y + S++ F+FSL N D R PI R AI H GP FG DL+
Sbjct: 8 LQQSLFDQFASTLESWLP-ESAAPRLLYRATRDGFEASSFHHRCDGLGPTLVVV-----RSAQHVFGGYSEVSWS-STSSYTS-STESFVFSLVNPLDLPPMR------------LPIKAGGRDKAIYGHPAYGPTFGCGHDLY 131
BLAST of mRNA_H-paniculata_contig39602.10283.1 vs. uniprot
Match: D2VCC1_NAEGR (Predicted protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VCC1_NAEGR) HSP 1 Score: 68.6 bits (166), Expect = 1.110e-10 Identity = 44/124 (35.48%), Postives = 69/124 (55.65%), Query Frame = 1
Query: 94 PCNLKLLYRASVDGFDASSFHAKCDRSTSTLTLVKVDSGRGCESIVGGYADTSWSQAT-ATYPNNSSKGFIFSLKNGTDKINARDADDDMFPRAAK-----YPIDDRARQFAIICHATEGPRFG 447
P LKL+++AS DGF A +FH+KCD ST+ +VK +G ++ GGY SW+ T A +P+ S+ F+FSL + DK+ + F + + + I D + Q++I + GP FG
Sbjct: 203 PNGLKLIFKASRDGFSAQAFHSKCDNKGSTVVIVKAKTG----AVFGGYTSISWTSTTGAFFPDKSA--FLFSLVSA-DKV-------ERFTKLTQQYGYYFKIGDNSSQYSIYHNPQYGPAFG 312
BLAST of mRNA_H-paniculata_contig39602.10283.1 vs. uniprot
Match: D7G2H5_ECTSI (TLDc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2H5_ECTSI) HSP 1 Score: 68.6 bits (166), Expect = 1.370e-10 Identity = 53/145 (36.55%), Postives = 70/145 (48.28%), Query Frame = 1
Query: 46 EVNAFLGKLQAWCPHEPCNLKLLYRASVDGFDASSFHAKC-DRSTSTLTLVKVDSGRGCESIVGGYADTSWS-QATATYPNNSSKG-FIFSLKNGTDKINARDADDDMFPRAAKYPID----DRARQFAIICHATEGPRFGNFDL 459
EV LQ WCP P ++LLYRAS DG+ FHA C + S +T+TL++V + +SIVGG++ WS A SS G FIF LK D DM + P+ D ++ A+ GP FG DL
Sbjct: 166 EVGELTATLQGWCPGNPNTMRLLYRASRDGWSPYPFHASCGNNSPNTITLLRVGAS---QSIVGGFSSVPWSPHAYGGDSIMSSLGAFIFMLK-----------DSDMGGPNSFQPVKWGKRDNNGGCDVVVGASRGPYFGRTDL 296
BLAST of mRNA_H-paniculata_contig39602.10283.1 vs. uniprot
Match: UPI000F553E58 (uncharacterized protein LOC113672820 n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=UPI000F553E58) HSP 1 Score: 67.4 bits (163), Expect = 2.490e-10 Identity = 48/132 (36.36%), Postives = 66/132 (50.00%), Query Frame = 1
Query: 70 LQAWCPHEPCNLKLLYRASVDGFDASSFHAKCDRSTSTLTLVKVDSGRGCESIVGGYADTSWSQATATYPNNSSKGFIFSLKNGTDKINARDADDDMFPRAAKYPIDDRARQFAIICHATEGPRFGN-FDLW 462
L W P + +LL RAS DGF A +FH+KCD T+T+VK SG I GG+ +TSWS S+ F+FS+ N A+K P+ + + AI C ++ GP FG FDL+
Sbjct: 171 LSGWLPQQDGKWQLLMRASQDGFQAKTFHSKCDDKGPTVTIVK--SGNN---IFGGFTETSWSSQGCYV--RCSQSFLFSMVNPQGMA------------ASKMPLV-KNQHNAIYCGSSYGPTFGGGFDLY 282
BLAST of mRNA_H-paniculata_contig39602.10283.1 vs. uniprot
Match: A0A3M6UM64_POCDA (Uncharacterized protein n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6UM64_POCDA) HSP 1 Score: 67.4 bits (163), Expect = 3.800e-10 Identity = 48/132 (36.36%), Postives = 66/132 (50.00%), Query Frame = 1
Query: 70 LQAWCPHEPCNLKLLYRASVDGFDASSFHAKCDRSTSTLTLVKVDSGRGCESIVGGYADTSWSQATATYPNNSSKGFIFSLKNGTDKINARDADDDMFPRAAKYPIDDRARQFAIICHATEGPRFGN-FDLW 462
L W P + +LL RAS DGF A +FH+KCD T+T+VK SG I GG+ +TSWS S+ F+FS+ N A+K P+ + + AI C ++ GP FG FDL+
Sbjct: 320 LSGWLPQQDGKWQLLMRASQDGFQAKTFHSKCDDKGPTVTIVK--SGNN---IFGGFTETSWSSQGCYV--RCSQSFLFSMVNPQGMA------------ASKMPLV-KNQHNAIYCGSSYGPTFGGGFDLY 431
BLAST of mRNA_H-paniculata_contig39602.10283.1 vs. uniprot
Match: A0A7S4UYD9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4UYD9_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 3.870e-10 Identity = 33/86 (38.37%), Postives = 51/86 (59.30%), Query Frame = 1
Query: 64 GKLQAWCPHEPC--NLKLLYRASVDGFDASSFHAKCDRSTSTLTLVKVDSGRGCESIVGGYADTSWSQATATYPNNSSKGFIFSLK 315
G ++ W + C ++KLLYRAS DG+ +S+FH KCD TLT+++ G I GG+ DT+WS +S K F+++L+
Sbjct: 8 GHIKGWLDEDGCGSDMKLLYRASRDGWGSSNFHEKCDHQGPTLTVIRCTGGY----IFGGFCDTAWSSDGGC--KSSPKAFVYTLR 87
BLAST of mRNA_H-paniculata_contig39602.10283.1 vs. uniprot
Match: UPI000644E9DF (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644E9DF) HSP 1 Score: 66.2 bits (160), Expect = 5.780e-10 Identity = 34/80 (42.50%), Postives = 47/80 (58.75%), Query Frame = 1
Query: 79 WCPHEPCNLKLLYRASVDGFDASSFHAKCDRSTSTLTLVKVDSGRGCESIVGGYADTSWSQATATYPNNSSKGFIFSLKN 318
WC ++ +KL+YRA+ DGF AS FH KCD + T++++K G SI GG DT+WS +A F+FSL N
Sbjct: 151 WCNNKYSKMKLMYRATRDGFGASMFHQKCDNNGPTVSIIKSTDG----SIFGGKTDTNWSSPSAGTYGVDPNAFLFSLVN 226
BLAST of mRNA_H-paniculata_contig39602.10283.1 vs. uniprot
Match: A0A397HHM3_9GLOM (Uncharacterized protein n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397HHM3_9GLOM) HSP 1 Score: 66.6 bits (161), Expect = 6.200e-10 Identity = 44/120 (36.67%), Postives = 58/120 (48.33%), Query Frame = 1
Query: 100 NLKLLYRASVDGFDASSFHAKCDRSTSTLTLVKVDSGRGCESIVGGYADTSWSQATATYPNNSSKGFIFSLKNGTDKINARDADDDMFPRAAKYPIDDRARQFAIICHATEGPRFGNFDL 459
+ K+L R S DGFDA++FHA+CDR T+ +VK+D G I+GGY W P S K FIFSL +G + + D A A+ H + GP FG DL
Sbjct: 341 DFKILVRGSRDGFDATTFHARCDRKGPTVVVVKID---GTGEILGGYNAAFWRTGAVYIP--SDKSFIFSLGDGKN-----------LQEVQLSRVRDSAS--AMYGHTSYGPHFGTADL 442
BLAST of mRNA_H-paniculata_contig39602.10283.1 vs. uniprot
Match: A0A7S4QY19_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QY19_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 7.080e-10 Identity = 33/86 (38.37%), Postives = 51/86 (59.30%), Query Frame = 1
Query: 64 GKLQAWCPHEPC--NLKLLYRASVDGFDASSFHAKCDRSTSTLTLVKVDSGRGCESIVGGYADTSWSQATATYPNNSSKGFIFSLK 315
G ++ W + C ++KLLYRAS DG+ +S+FH KCD TLT+++ G I GG+ DT+WS +S K F+++L+
Sbjct: 8 GHIKGWLDEDGCGSDMKLLYRASRDGWGSSNFHEKCDHQGPTLTVIRCTGGY----IFGGFCDTAWSSDGGC--KSSPKAFVYTLR 87
BLAST of mRNA_H-paniculata_contig39602.10283.1 vs. uniprot
Match: A0A3M7T9B4_BRAPC (Tldc domain-containing n=1 Tax=Brachionus plicatilis TaxID=10195 RepID=A0A3M7T9B4_BRAPC) HSP 1 Score: 66.6 bits (161), Expect = 7.250e-10 Identity = 44/132 (33.33%), Postives = 64/132 (48.48%), Query Frame = 1
Query: 64 GKLQAWCPHEPCNLKLLYRASVDGFDASSFHAKCDRSTSTLTLVKVDSGRGCESIVGGYADTSWSQATATYPNNSSKGFIFSLKNGTDKINARDADDDMFPRAAKYPIDDRARQFAIICHATEGPRFGNFDL 459
GK Q W KLLYR S DGF+A SFH KCD +TLT+V+ D+ + I GG+ ++WS + + ++ F+FSL ++ D+ ++AI C GP FGN D+
Sbjct: 783 GKFQNW--------KLLYRGSRDGFEACSFHKKCDTHPNTLTIVRTDTLK----IFGGFTGSTWSSDSNEFKSDP-YAFLFSLATNSNNSQIIKCSDE---------------KYAIYCDKDFGPCFGNGDI 886 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig39602.10283.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig39602.10283.1 >prot_H-paniculata_contig39602.10283.1 ID=prot_H-paniculata_contig39602.10283.1|Name=mRNA_H-paniculata_contig39602.10283.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=154bp LTAQHDVDSGILRGSEVNAFLGKLQAWCPHEPCNLKLLYRASVDGFDASSback to top mRNA from alignment at H-paniculata_contig39602:1319..1843- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig39602.10283.1 ID=mRNA_H-paniculata_contig39602.10283.1|Name=mRNA_H-paniculata_contig39602.10283.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=525bp|location=Sequence derived from alignment at H-paniculata_contig39602:1319..1843- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig39602:1319..1843- >mRNA_H-paniculata_contig39602.10283.1 ID=mRNA_H-paniculata_contig39602.10283.1|Name=mRNA_H-paniculata_contig39602.10283.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=924bp|location=Sequence derived from alignment at H-paniculata_contig39602:1319..1843- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |