mRNA_H-paniculata_contig3941.10246.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig3941.10246.1 vs. uniprot
Match: D8LLK8_ECTSI (ULP_PROTEASE domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLK8_ECTSI) HSP 1 Score: 176 bits (447), Expect = 6.480e-49 Identity = 78/102 (76.47%), Postives = 89/102 (87.25%), Query Frame = 2
Query: 191 MSQVLNYHDAVVYGTDVELFGERGWLNDNCINWFFRFLEHNIFPGRDDLLFMDPAVVSCMIHQCEDEEELVDIGRGIELSRRSMVFVPINDAAGRLSRGSHW 496
M+QVLNYHDAVVY TDV LFG+ WLNDNCINWFFR LEH +FPGR DLLFMDPAVVSCM++QC+D EE D+GRG+EL+ RSMVFVP+N+AAG SRGSHW
Sbjct: 1 MTQVLNYHDAVVYDTDVALFGDGEWLNDNCINWFFRVLEHEVFPGRTDLLFMDPAVVSCMMNQCDDLEEYEDLGRGLELAIRSMVFVPVNNAAGPFSRGSHW 102
BLAST of mRNA_H-paniculata_contig3941.10246.1 vs. uniprot
Match: A0A7S2V1V9_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1V9_9STRA) HSP 1 Score: 131 bits (330), Expect = 7.850e-33 Identity = 56/100 (56.00%), Postives = 75/100 (75.00%), Query Frame = 2
Query: 197 QVLNYHDAVVYGTDVELFGERGWLNDNCINWFFRFLEHNIFPGRDDLLFMDPAVVSCMIHQCEDEEELVDIGRGIELSRRSMVFVPINDAAGRLSRGSHW 496
QVLNY+DAVVY TD+ELF WLND CIN++FR LEH F + LF+DPAVVS ++ QC D E+ D+GR + L +RS++F+P+NDA+ +L +GSHW
Sbjct: 4 QVLNYNDAVVYDTDIELFNPGCWLNDRCINFYFRHLEHCTFSSNTEFLFIDPAVVSFLMFQCSDSEDEEDLGRALGLDQRSLIFIPVNDASHQLQQGSHW 103
BLAST of mRNA_H-paniculata_contig3941.10246.1 vs. uniprot
Match: A0A1V9Y8Y9_9STRA (SUMO protease n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y8Y9_9STRA) HSP 1 Score: 115 bits (289), Expect = 6.540e-27 Identity = 47/96 (48.96%), Postives = 68/96 (70.83%), Query Frame = 2
Query: 209 YHDAVVYGTDVELFGERGWLNDNCINWFFRFLEHNIFPGRDDLLFMDPAVVSCMIHQCEDEEELVDIGRGIELSRRSMVFVPINDAAGRLSRGSHW 496
YHDA +Y D++LF + WLND IN++ + H + GRDD+L MDPAVVSCM+ QC+DEE+L+D+ G++L + M+ +P+ND S+GSHW
Sbjct: 6 YHDAQLYDQDLKLFTQNAWLNDAAINFYLTMIYHEMVHGRDDVLLMDPAVVSCMMLQCDDEEDLLDLAHGLQLQFKKMILLPVNDRENFDSQGSHW 101
BLAST of mRNA_H-paniculata_contig3941.10246.1 vs. uniprot
Match: G5A499_PHYSP (Ubiquitin1-specific protease n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5A499_PHYSP) HSP 1 Score: 114 bits (284), Expect = 3.510e-26 Identity = 50/100 (50.00%), Postives = 67/100 (67.00%), Query Frame = 2
Query: 197 QVLNYHDAVVYGTDVELFGERGWLNDNCINWFFRFLEHNIFPGRDDLLFMDPAVVSCMIHQCEDEEELVDIGRGIELSRRSMVFVPINDAAGRLSRGSHW 496
QVLNYHD +Y +DV LF R WLNDN +N++ +FL + DD+L MDPAVVSC++HQCEDE+E D+ RG+ L++R + VP+ D SHW
Sbjct: 13 QVLNYHDVQLYESDVALFSGRQWLNDNAVNFYLQFLTQTV--ASDDVLLMDPAVVSCLLHQCEDEDEFQDLARGVNLAQRRLCLVPVTDNDLLGGDSSHW 110
BLAST of mRNA_H-paniculata_contig3941.10246.1 vs. uniprot
Match: A0A1V9ZRM3_9STRA (SUMO protease n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZRM3_9STRA) HSP 1 Score: 112 bits (281), Expect = 9.470e-26 Identity = 47/102 (46.08%), Postives = 73/102 (71.57%), Query Frame = 2
Query: 191 MSQVLNYHDAVVYGTDVELFGERGWLNDNCINWFFRFLEHNIFPGRDDLLFMDPAVVSCMIHQCEDEEELVDIGRGIELSRRSMVFVPINDAAGRLSRGSHW 496
M+ VL YHDA +Y D+ LF ++ WLND IN++F + H G +DLL MDPAV SCM+ QC+DE++L ++ +G++L+R+ ++ +P+ND + S+GSHW
Sbjct: 1 MAAVL-YHDAQLYERDLALFVKKQWLNDAAINFYFTMIHHETCHGAEDLLLMDPAVASCMLLQCDDEDDLTELAQGLQLARKELIVLPVNDRSSFESQGSHW 101
BLAST of mRNA_H-paniculata_contig3941.10246.1 vs. uniprot
Match: K3XBB7_GLOUD (ULP_PROTEASE domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XBB7_GLOUD) HSP 1 Score: 113 bits (283), Expect = 9.630e-26 Identity = 51/104 (49.04%), Postives = 70/104 (67.31%), Query Frame = 2
Query: 191 MSQVLNYHDAVVYGTDVELFGERGWLNDNCINWFFRFLEHNIFPGRD--DLLFMDPAVVSCMIHQCEDEEELVDIGRGIELSRRSMVFVPINDAAGRLSRGSHW 496
++QVLNYHD +Y +DV LF R WLNDN IN++ +FL H+ G DLL MDPAVVSCM+ QC+D++E D+GRG+ L + + F+P+ND +HW
Sbjct: 3 VTQVLNYHDVQLYDSDVALFATRQWLNDNAINFYLQFLTHDALNGGAVADLLLMDPAVVSCMMLQCDDDDEYEDLGRGLTLDSKRVCFIPMNDNDQFGGESTHW 106
BLAST of mRNA_H-paniculata_contig3941.10246.1 vs. uniprot
Match: W7TT36_9STRA (Sentrin-specific protease 8 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TT36_9STRA) HSP 1 Score: 112 bits (280), Expect = 4.520e-25 Identity = 53/102 (51.96%), Postives = 69/102 (67.65%), Query Frame = 2
Query: 197 QVLNYH--DAVVYGTDVELFGERGWLNDNCINWFFRFLEHNIFPGRDDLLFMDPAVVSCMIHQCEDEEELVDIGRGIELSRRSMVFVPINDAAGRLSRGSHW 496
+VL Y+ +A + D+ LF WLND CIN++FR LEH F GR DLLF+DP VVSCM+ QC DEE+L ++ G+ L RS+VF+PINDA S +HW
Sbjct: 5 EVLFYYQDEAQMTRGDLHLFKAPAWLNDRCINFYFRVLEHEEFAGRPDLLFLDPVVVSCMLIQCTDEEDLKELAGGLRLDTRSIVFIPINDAEEFFSGCTHW 106
BLAST of mRNA_H-paniculata_contig3941.10246.1 vs. uniprot
Match: A0A024UP06_9STRA (ULP_PROTEASE domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UP06_9STRA) HSP 1 Score: 109 bits (272), Expect = 4.630e-25 Identity = 43/96 (44.79%), Postives = 68/96 (70.83%), Query Frame = 2
Query: 209 YHDAVVYGTDVELFGERGWLNDNCINWFFRFLEHNIFPGRDDLLFMDPAVVSCMIHQCEDEEELVDIGRGIELSRRSMVFVPINDAAGRLSRGSHW 496
YHDA +Y D+ LF WLND IN++F + H++ D+L MDPAVVSCM+ QC+++E+L+D+ +G++L +S++ +P+ND + S+GSHW
Sbjct: 6 YHDAQLYARDLSLFTSNAWLNDAAINFYFTVVYHDLCGAPSDVLLMDPAVVSCMMLQCDEDEDLIDLTQGLQLKEKSLIVLPVNDRSSFDSQGSHW 101
BLAST of mRNA_H-paniculata_contig3941.10246.1 vs. uniprot
Match: A0A485LBN4_9STRA (Aste57867_18962 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LBN4_9STRA) HSP 1 Score: 110 bits (274), Expect = 9.300e-25 Identity = 47/96 (48.96%), Postives = 67/96 (69.79%), Query Frame = 2
Query: 209 YHDAVVYGTDVELFGERGWLNDNCINWFFRFLEHNIFPGRDDLLFMDPAVVSCMIHQCEDEEELVDIGRGIELSRRSMVFVPINDAAGRLSRGSHW 496
YHDA +Y D+ LF WLND IN++F H++ D+LFMDPAVVSCM+ QC+D+E+L D+ +G++L +S++ VPIND + S+GSHW
Sbjct: 6 YHDAQLYDRDLRLFPTNQWLNDAAINFYFTVAFHDLCGASSDILFMDPAVVSCMMLQCDDDEDLEDLAQGLQLREKSLLLVPINDRSTFDSQGSHW 101
BLAST of mRNA_H-paniculata_contig3941.10246.1 vs. uniprot
Match: A0A662X3C8_9STRA (ULP_PROTEASE domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X3C8_9STRA) HSP 1 Score: 114 bits (285), Expect = 1.600e-24 Identity = 49/104 (47.12%), Postives = 70/104 (67.31%), Query Frame = 2
Query: 197 QVLNYHDAVVYGTDVELFGERGWLNDNCINWFFRFLEHNIFPGRD----DLLFMDPAVVSCMIHQCEDEEELVDIGRGIELSRRSMVFVPINDAAGRLSRGSHW 496
QVLNYHD +Y +DV LF R WLNDN +N++F++L + D D+L MDPAVVSCM+HQCED++E D+ RG++L + + +P++D A + SHW
Sbjct: 4 QVLNYHDVQLYDSDVALFASRQWLNDNALNFYFQYLYQTLCLRGDGSNSDVLPMDPAVVSCMLHQCEDDDEYADLARGLDLQNKQLCLIPVSDNAALDGQSSHW 107 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3941.10246.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3941.10246.1 >prot_H-paniculata_contig3941.10246.1 ID=prot_H-paniculata_contig3941.10246.1|Name=mRNA_H-paniculata_contig3941.10246.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=103bp MSQVLNYHDAVVYGTDVELFGERGWLNDNCINWFFRFLEHNIFPGRDDLLback to top mRNA from alignment at H-paniculata_contig3941:12466..16204+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3941.10246.1 ID=mRNA_H-paniculata_contig3941.10246.1|Name=mRNA_H-paniculata_contig3941.10246.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3739bp|location=Sequence derived from alignment at H-paniculata_contig3941:12466..16204+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3941:12466..16204+ >mRNA_H-paniculata_contig3941.10246.1 ID=mRNA_H-paniculata_contig3941.10246.1|Name=mRNA_H-paniculata_contig3941.10246.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=618bp|location=Sequence derived from alignment at H-paniculata_contig3941:12466..16204+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |