mRNA_H-paniculata_contig393.10220.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig393.10220.1 vs. uniprot
Match: D7FS27_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS27_ECTSI) HSP 1 Score: 385 bits (990), Expect = 3.070e-122 Identity = 236/388 (60.82%), Postives = 267/388 (68.81%), Query Frame = 1
Query: 595 MDQAAEAAAAAAGGMFSSAALYPLEVIKTNLQAQTKPKKTSPVTSTRSRPFDVETGGESRPSTVNVYTGAEGTAEAEVVMSAAAAGQRSPDIGGISTENGSGREEGKIEAWKEDSAKEEPPSVMSVAREIYSREGILGFYNGTFYASGQSGLEKAAYFYGYGWLKALALRGGXXXXXVGGVERELSAVTDLGLGYLAEAFHLPFTIPIEVVLTKIMTSKDKTNSFAVIQGILAESGPAGFYKGIQAYVVLCLKPAIQYAVFNRLKGVLLAYKAGAGGASRVKELTAMQAFALGAISRAVATVIVFPYIRAKVIIMSRAGAESRGE--KTPS--ILSSLVSILKDEGASALFQGITPEITRGVLSAALMLMVKEKIHGIVKSAILGCKT 1746
M+QAAEAAAAAAGGMFS+ ALYPLEVIKTNLQA TK ++ G PS AE E+ + PPSV SVA++IYSREGI G Y G +YAS QSG+EKAAYFYGYGWLKALALRGG ELS DLGLGYLAEAFHLPFTIPIEVVLTKIMTSK+KTN+FAVIQGIL+ESGPAGFY GIQAY VLCLKPAIQYAVFNRLK + LAY++ +++ KELTA+QAF +GAISRAVATVIVFPYIRAKVIIMS+ E G K+PS ILSSL+++LKD+G SALFQGITPEI RGVLSAALM++VKEKIH VK AI+G +T
Sbjct: 1 MEQAAEAAAAAAGGMFSAGALYPLEVIKTNLQAHTK-----------------QSTGRPSPSQTE-------EAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEERQLDCPPSVASVAKDIYSREGIAGLYRGVWYASTQSGVEKAAYFYGYGWLKALALRGGGRG--------ELSTAKDLGLGYLAEAFHLPFTIPIEVVLTKIMTSKEKTNAFAVIQGILSESGPAGFYTGIQAYAVLCLKPAIQYAVFNRLKAITLAYRSDGRSSAQPKELTAVQAFVIGAISRAVATVIVFPYIRAKVIIMSKKTGEGSGNGTKSPSTSILSSLITLLKDDGFSALFQGITPEIGRGVLSAALMMLVKEKIHSTVKGAIVGNRT 356
BLAST of mRNA_H-paniculata_contig393.10220.1 vs. uniprot
Match: A0A835ZGU7_9STRA (Mitochondrial carrier domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGU7_9STRA) HSP 1 Score: 214 bits (546), Expect = 1.850e-59 Identity = 128/265 (48.30%), Postives = 169/265 (63.77%), Query Frame = 1
Query: 958 SVMSVAREIYSREGILGFYNGTFYASGQSGLEKAAYFYGYGWLK--ALALRGGXXXXXVGGVERELSAVTDLGLGYLAEAFHLPFTIPIEVVLTKIMTSKDKTNSFA---VIQGILAESGPAGFYKGIQAYVVLCLKPAIQYAVFNRLKGVLLAYKAGAGGASRVKE----------LTAMQAFALGAISRAVATVIVFPYIRAKVIIMSRAGAESR-GEKTPSILSSLVSILKDEGASALFQGITPEITRGVLSAALMLMVKEK 1704
S +SVAR I G G Y+G Y+ + LEKAAYFYGYGWL+ A+A RGG R A+ D+ LGY A+A HLP T+P+++VL +++T++ + +++GIL G G Y+G +AYVVLCLKPA+QYA+FNRL+G +LA L+A QAFALGAI+RA+ATV VFP+ RAKV+ M+ G S G+ PSIL SLV I + EG ALF+G+ PE+TRGVLSAALMLM+KE+
Sbjct: 3 SSLSVARHIIQCRGAAGLYDGVEYSVLEGALEKAAYFYGYGWLRRAAVAARGG----------RPPGALADVALGYAADACHLPLTLPLQLVLARLITARGGSGGAGADGIVRGILKTQGWRGLYRGARAYVVLCLKPALQYAIFNRLRGAVLAXXXXXXXXXXXXXXXXXXXXXXTLSAAQAFALGAIARAIATVAVFPFTRAKVLAMTDDGGHSESGKPPPSILQSLVLIARTEGPRALFKGVGPELTRGVLSAALMLMIKER 257
BLAST of mRNA_H-paniculata_contig393.10220.1 vs. uniprot
Match: A0A7S1UFP1_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UFP1_9STRA) HSP 1 Score: 207 bits (527), Expect = 6.810e-56 Identity = 150/390 (38.46%), Postives = 211/390 (54.10%), Query Frame = 1
Query: 595 MDQAAEAAAAAAGGMFSSAALYPLEVIKTNLQAQTKPKKTSPVTSTRSRPFDVETGGESRPSTVNVYTGAEGTAEAEVVMSAAAAGQRSPDIGGISTENGSGREE----GKIEAWKEDSAKEEPPSVMSVAREIYSREGILGFYNGTFYASGQSGLEKAAYFYGYGWLKALALRGGXXXXXVGGVERELSAVTDLGLGYLAEAFHLPFTIPIEVVLTKIMTSKDKTN-SFAVIQGILAESGPAGFYKGIQAYVVLCLKPAIQYAVFNRLKGVLLAYKAGAGGASRVKELTAMQAFALGAISRAVATVIVFPYIRAKVIIMS--RAGAESRGEK--TPSILSSLVSILKDEGASALFQGITPEITRGVLSAALMLMVKEKIHGIVKSAILG 1737
M+ AEA+AAA GG+ SS L+PL+ +KT +QA + P+ + A G AE +V A +PD + N R E G + PS + VAR +Y G FY G ++ QS +EK YFY Y K+ A R E+ T + LGYL++ HLP T+PIEVV K+ T++ + + ++ +LAESG G Y+G +AY+ LC +PA+QYA++++LK +LL K R KELT+ +AF LGA+SRA+AT+I+FPY RAKV+ + A A+ E+ + S++S LV I +DEG LFQG+ PE+ RGV SAALMLMVKEK+ VK A+LG
Sbjct: 5 MEALAEASAAAVGGVVSSVVLHPLDTLKTAVQA-------------------------AAPAADDEEADATGKAEKALVGHALGIDDAAPDA---PSSNPPSRCETPTPGSPAPXXXSAPPRAAPSTLEVARALYEDGGAKSFYRGVGISAVQSLVEKFCYFYAYSLFKSGARRASRRG--------EVGPTTGIVLGYLSDWSHLPVTLPIEVVCRKMQTARGRNPLPYVILNEVLAESGYKGLYRGWEAYLFLCWRPAVQYAIYDQLKALLLKAK-------RRKELTSAEAFLLGAVSRAIATIILFPYARAKVVAQAGKNASADRPEEERASASMVSVLVQIYRDEGVPGLFQGLGPELVRGVFSAALMLMVKEKLTASVKRALLG 351
BLAST of mRNA_H-paniculata_contig393.10220.1 vs. uniprot
Match: A0A7S4L290_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4L290_GUITH) HSP 1 Score: 197 bits (500), Expect = 1.230e-52 Identity = 117/261 (44.83%), Postives = 163/261 (62.45%), Query Frame = 1
Query: 952 PPSVMSVAREIYSREGILGFYNGTFYASGQSGLEKAAYFYGYGWLKALALRGGXXXXXVGGVERELSAVTDLGLGYLAEAFHLPFTIPIEVVLTKIMTSK-DKTNSFAVIQGILAESGPAGFYKGIQAYVVLCLKPAIQYAVFNRLKGVLLAYKAGAGGASRVKELTAMQAFALGAISRAVATVIVFPYIRAKVIIMSRAGAESRGEKTPSILSSLVSILKDEGASALFQGITPEITRGVLSAALMLMVKEKIHGIVKSAI 1731
P +++SVA+++Y EG+ GFY G Y++ QS EKA YF+GY ++ + + ++ + + G LAE HLP T+PI+ V +I T K K N ++ I+ ESG G Y G AY+VLCLKPAI Y +F+ LK +L + GG VK LTA++AF +GAI+RAVAT+ VFPY RAKVI+ S GE+ PSI ++ I+K+EG +L+QG TPE+TRGVLSAA+ML VKEKI V+ +
Sbjct: 60 PTTMISVAKDLYKSEGVPGFYKGFQYSAIQSATEKAIYFWGYTYILKTWKK----------LFGDVGTASSVLCGCLAEWVHLPVTLPIDAVTVRIQTVKGSKANPLQILASIIRESGIKGLYSGWTAYIVLCLKPAITYGLFDALKRWILKRNSMRGG-REVKVLTALEAFLIGAIARAVATIAVFPYTRAKVIVKS--SQVQPGEQAPSIAGTVSRIVKNEGFLSLYQGCTPEVTRGVLSAAIMLAVKEKIAATVRQMV 307
BLAST of mRNA_H-paniculata_contig393.10220.1 vs. uniprot
Match: A0A6S8YJ66_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8YJ66_9STRA) HSP 1 Score: 197 bits (500), Expect = 2.040e-52 Identity = 131/386 (33.94%), Postives = 196/386 (50.78%), Query Frame = 1
Query: 610 EAAAAAAGGMFSSAALYPLEVIKTNLQAQTKPKKTSPVTSTRSRPFDVETGGESRPSTVNVYTGAEGTAEAEVVMSAAAAGQRSPDIGGISTENGSGREEGKIEAWKEDSAKEEPPSVMSVAREIYSREGILGFYNGTFYASGQSGLEKAAYFYGYGWLKALALRGGXXXXXVGGVERELSAVTDLGLGYLAEAFHLPFTIPIEVVLTKIMTSKDKTNSFAVIQGILAESGPAGFYKGIQAYVVLCLKPAIQYAVFNRLKGVLLAYKAGAGGASRVKELTAMQAFALGAISRAVATVIVFPYIRAKVIIMSRAGAESRGE----------KTPSILSSLVSILKDEGASALFQGITPEITRGVLSAALMLMVKEKIHGIVKSAILG 1737
E +A+ GG FS++ALYPLEV+KT +QA+ KK++ +G G ED +E+P +++ ++++Y+ G+ GFY+G ++ QS +EKA YF+ Y +K + +G + + +L LG +AE HLP T+PI+ + TKI T +FA++ +L+E G G YKGIQAY VLCLKPAIQY VF ++K V+L +A AGG + L A +AF LG ++R AT+ VFPY+RAKV++ S + + K I S + + G +++GI PE+TRG+ SAALM+M KEKI +VK A+ G
Sbjct: 9 EVVSASLGGAFSASALYPLEVLKTKMQAEPSSKKST---------------------------------------------------------SGDG----------EDDKEEKPSGMIAYSKKMYAENGLAGFYSGIGTSAFQSSMEKALYFFAYTGMKNVYKM---MKVLMGNDDGNIGTFANLVLGSMAEWAHLPITLPIDCLTTKIQTDSSGKGAFALLSIMLSEKGIGGMYKGIQAYTVLCLKPAIQYTVFEQVKKVVLLSRARAGGRADNNSLGAAEAFLLGMVARLAATIAVFPYLRAKVMLQSTKSSTDNDDVKTTTPAATQKNKGIPSMIAEMYASGGIGEMYRGIGPELTRGIFSAALMMMAKEKISEVVKVALEG 324
BLAST of mRNA_H-paniculata_contig393.10220.1 vs. uniprot
Match: W7U3F7_9STRA (DnaJ subfamily C, member 28 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U3F7_9STRA) HSP 1 Score: 205 bits (521), Expect = 2.530e-52 Identity = 149/387 (38.50%), Postives = 215/387 (55.56%), Query Frame = 1
Query: 607 AEAAAAAAGGMFSSAALYPLEVIKTNLQA-QTKPKKTSPVTSTRSRPFDVETGGESRPSTVNVYTGAEGTAEAEVVMSAAAAGQRSPDIGGISTENGSGREEGKIEAWKEDSAKEEPPSVMSVAREIYSREGILGFYNGTFYASGQSGLEKAAYFYGYGWLKALA--LRGGXXXXXVGGVERELSAVTDLGLGYLAEAFHLPFTIPIEVVLTKIMTSKDKTNSFA-VIQGILAESGPAGFYKGIQAYVVLCLKPAIQYAVFNRLKGVLLAYKAGAGGASRVKELTAMQAFALGAISRAVATVIVFPYIRAKVIIMSRAGAESRGEK-------TPSILSSLVSILKDEGASALFQGITPEITRGVLSAALMLMVKEKIHGIVKSAIL 1734
AEA +AA GG S+A LYPLEVIKT +QA +TK +K S R + +G+ +P+ G + GS + + + VA+EIY R G+ GF+ G Y+S QS LEK+ YFY Y +K + L GG GV L +GYL+E HLP T+PIEVV+T+I+TS+ + S++ + +L E GP+G YKGI AY VLCLKPAIQY +F +L+ +L+ + G V+ L+A QAF LGA+SRA+AT+I+FP+IR + ++M++ GE+ ++L +L L+DEG L++G+ PE+TRGVLSAALMLM+KE+++ K +L
Sbjct: 280 AEALSAAEGGAISTAVLYPLEVIKTVIQASKTKEQKQS-----RQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAADPLSGETAPEEG----DEGSDEDSSAL-------------TTQDVAKEIYRRAGLGGFFGGVQYSSLQSSLEKSIYFYAYSTMKGVVKVLNGGRF-----GVRENLL------VGYLSEVVHLPVTVPIEVVVTRIITSQGRLKSWSEAAKEVLKEGGPSGLYKGIPAYGVLCLKPAIQYTLFEQLRRGILSLLSRRRGVP-VRALSAWQAFLLGALSRALATLIIFPWIRVRKMLMAQGKGVREGEEGXXXXXXEATVLFTLQKTLRDEGVPGLYRGMAPELTRGVLSAALMLMIKERLYDFNKRMLL 632
BLAST of mRNA_H-paniculata_contig393.10220.1 vs. uniprot
Match: K0RBA8_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RBA8_THAOC) HSP 1 Score: 191 bits (485), Expect = 2.100e-50 Identity = 141/380 (37.11%), Postives = 199/380 (52.37%), Query Frame = 1
Query: 604 AAEAAAAAAGGMFSSAALYPLEVIKTNLQAQTKPKKTSPVTSTRSRPFDVETGGESRPSTVNVYTGAEGTAEAEVVMSAAAAGQRSPDIGGISTENGSGREEGKIEAWKEDSAKEEPPSVMSVAREIYSREGILGFYNGTFYASGQSGLEKAAYFYGYGWLKALALRGGXXXXXVGGVERELSAVTDLGLGYLAEAFHLPFTIPIEVVLTKIMTSKDKTNSFAVIQGILAESGPAGFYKGIQAYVVLCLKPAIQYAVFNRLKGVLLA-YKAGAGGASRVKE-LTAMQAFALGAISRAVATVIVFPYIRAKVIIMSRAGAESRGEKTPSILSSLVSILKDEGASALFQGITPEITRGVLSAALMLMVKEKIHGIVKSAILG 1737
A+E +A GGMFS++ALYPLE++KT +QA++K K G + E AA D+ TE + + S A + +EG FY G ++ QS EKA YF+ Y +LK + GV+ + A+++L LG AE HLP T+PI+ V T I T +F +I IL+E G GFYKGI+AY VLCLKPAIQY V+ ++K ++LA +A A G + V++ LTA +AF LG +R VAT++ +PY+RAKV++ S G P ++ +S G +AL+QGI PE+TRGV SAALM+MVKE+I +VK+ I G
Sbjct: 6 ASEVVSAMVGGMFSASALYPLEILKTRMQAESKAPK--------------------------------GDGDEEEKKDAAEVLTPEEDLKARYTEAAA-------------------EGMGSYASLMLEKEGGGAFYTGVVTSAVQSATEKALYFFAYTFLK-------NGYVDLTGVQN-IGAMSNLVLGCFAEWAHLPVTLPIDCVTTAIQTDDKNRGAFVLIGSILSEKGIGGFYKGIEAYTVLCLKPAIQYTVYEQVKSIVLAGRRAAASGRAAVEDSLTAAEAFFLGMFARIVATMLTYPYLRAKVMLQSTYGNAKVKPTIPQMIGEQIS---HGGLTALYQGIGPELTRGVFSAALMMMVKERIGVVVKALIDG 323
BLAST of mRNA_H-paniculata_contig393.10220.1 vs. uniprot
Match: A0A7S4NE59_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NE59_9STRA) HSP 1 Score: 191 bits (485), Expect = 7.260e-50 Identity = 145/395 (36.71%), Postives = 217/395 (54.94%), Query Frame = 1
Query: 607 AEAAAAAAGGMFSSAALYPLEVIKTNLQAQTKPKKTSPVTSTRSRPFDVETG------GESRPSTVNVYTGAEGTAEAEVVMSAAAAGQRS-PDIGGISTENGSGREEGKIEAWKEDSAKEEPPSVMSVAREIYSREGILGFYNGTFYASGQSGLEKAAYFYGYGWLKALALRGGXXXXXVGGVERELSAVTDLGLGYLAEAFHLPFTIPIEVVLTKIMTSKDKTNSFAVIQGILAESGPAGFYKGIQAYVVLCLKPAIQYAVFNRLKGVLLAYKAGAG--------GASR---VKELTAMQAFALGAISRAVATVIVFPYIRAKVIIMSRAGAESRGEKTPSILSSLVSILKDEGASALFQGITPEITRGVLSAALMLMVKEKIHGIVKSAILG 1737
AE AA+ GG FS++ALYPLE++KT +QA+TK KK + + E GE + V + E T +A G+ + P+ G E+ +E P ++ AR++++ GI FY+G ++ QS +EK+ YF+ Y +LK + G+ + + +L LG LAE HLP T+PI+ + T I T K +FA++ +L+E G G YKGIQAY VLCLKPAIQY V+ ++K ++L + AG G+ R V+ L+A +AF LG +R VAT+I FPY+RAKV++ S RG K I + +V + + G S +FQG+ PE+TRG+ SAALM+M KEK+ +V +A++G
Sbjct: 8 AEVVAASVGGAFSASALYPLEMLKTRMQAETKVKKKKGGANEKQPEETAEIASSSADDGEGEEGAIPVPSSDEETEPTRQKQAAHKKGKNAQPEDRGEDDED----------------EQEAPLGMIPYARKMHAEGGIGAFYSGIETSAIQSAMEKSLYFFAYTFLK-------NAYKTLTGLT-SIDTIPNLVLGSLAEWAHLPVTLPIDCLTTAIQTDKTGRGAFALMSAMLSEKGVGGMYKGIQAYAVLCLKPAIQYTVYEQVKRMVLLERRLAGHHKGNLRHGSRRGDDVEALSAAEAFFLGMFARTVATMITFPYVRAKVMLQSTYA--ERGLKG-GIPAMIVEMYGEGGLSEVFQGLGPELTRGIFSAALMMMAKEKL-AVVVNALVG 374
BLAST of mRNA_H-paniculata_contig393.10220.1 vs. uniprot
Match: A0A7S2DY88_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2DY88_9STRA) HSP 1 Score: 188 bits (477), Expect = 2.740e-49 Identity = 140/386 (36.27%), Postives = 198/386 (51.30%), Query Frame = 1
Query: 604 AAEAAAAAAGGMFSSAALYPLEVIKTNLQAQTKPKKTSPVTSTRSRPFDVETGGESRPSTVNVYTGAEGTAEAEVVMSAAAAGQRSPDIGGISTENGSGREEGKIEAWKEDSAKEEPPSVMSVA--REIYSREGILGFYNGTFYASGQSGLEKAAYFYGYGWLKALALRGGXXXXXVGGVERELSAVTDLGLGYLAEAFHLPFTIPIEVVLTKIMTSKDKTNSFAVIQGILAESGPAGFYKGIQAYVVLCLKPAIQYAVFNRLKGVLLAYKAGAGGASRVKELTAMQAFALGAISRAVATVIVFPYIRAKVIIMS-----RAGAESRG-EKTPSILSSLVSILKDEGASALFQGITPEITRGVLSAALMLMVKEKIHGIVKSAILG 1737
A E +A+ GG FS++ALYPLEV+KT +QA+T S S N TENG E+ ++E S+ +A +++Y+ GI FY+G ++ QS +EKA YF+ Y LK + G + + +L LG +AE HLP T+PI+ + TKI T +FA++ +L+E G AG YKGIQAY VLCLKPAIQY VF ++K V+L + A G + L A +AF LG ++R AT+ VFPY+RAKV++ S G+ + G +K I S + + G + +F+GI PE+TRGVLSAALMLM KEKI V++ + G
Sbjct: 7 ATEVISASLGGAFSASALYPLEVLKTKMQAET-----------------------SDSSKTNA------------------------------TENGD-----------EEKGEQEQASLGMIAYSQKMYAENGIGAFYSGIGTSAFQSAMEKALYFFAYTALKNVYKT---MAILTGSDDGRIGTFANLVLGSMAEWAHLPITLPIDCLTTKIQTDSSGKGAFALLSAMLSEKGIAGMYKGIQAYTVLCLKPAIQYTVFEQVKRVVLLGRRNADGRTDYS-LGAAEAFLLGMVARLAATIAVFPYLRAKVMLQSTYADVEDGSNTGGTKKKKGIPSMIAEMYASGGVAEMFRGIGPELTRGVLSAALMLMAKEKISAAVRATVEG 324
BLAST of mRNA_H-paniculata_contig393.10220.1 vs. uniprot
Match: A0A7S2P208_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P208_9STRA) HSP 1 Score: 183 bits (464), Expect = 1.730e-47 Identity = 132/381 (34.65%), Postives = 198/381 (51.97%), Query Frame = 1
Query: 607 AEAAAAAAGGMFSSAALYPLEVIKTNLQAQTKPKKTSPVTSTRSRPFDVETG-GESRPSTVNVYTGAEGTAEAEVVMSAAAAGQRSPDIGGISTENGSGREEGKIEAWKEDSAKEEPP-SVMSVAREIYSREGILGFYNGTFYASGQSGLEKAAYFYGYGWLKAL--ALRGGXXXXXVGGVERELSAVTDLGLGYLAEAFHLPFTIPIEVVLTKIMTSKDKTNSFAVIQGILAESGPAGFYKGIQAYVVLCLKPAIQYAVFNRLKGVLL-----AYKAGAGGASRVKELTAMQAFALGAISRAVATVIVFPYIRAKVIIMSRAGAESRGEKTPSILSSLVSILKDEGASALFQGITPEITRGVLSAALMLMVKEKIHGIVK 1722
AEAAAA+ GG S++ LYPLEV+KT +QA VE+ + PS+ + G+E T + A +A +DS+K + S + +E+Y G+ FY+G ++ QS EKA YF+ Y + K ++GG + +L LG +AE HLP T+PI+ + TKI TSK N + ++ + +E G +G YKG +AY VLCLKPAIQY V+ ++KG++L A K G L+A ++F LG ++RA++T +VFPY RAKV++ + + E T SI L + ++G +LF G+ PE+TRGVLS A MLM+KE+I ++
Sbjct: 10 AEAAAASVGGAISASVLYPLEVLKTKMQA-------------------VESSDAPAEPSSGDSNAGSEDTTTSASYEKIAE------------------------DAEDQDSSKPKKNLSAIEFTKEMYKDGGVAVFYDGIGTSAFQSACEKALYFFAYTYFKNFYKGIKGGA-----------IGTTENLILGGMAEWAHLPITLPIDCLTTKIQTSKTNDNPYRIMMAMFSEKGLSGMYKGWEAYTVLCLKPAIQYTVYEQIKGIMLRRRKAAPKGSRGRGKSANTLSAAESFLLGMVARAISTTLVFPYTRAKVMLQANKKNDGSDETT-SIPQMLTKMYNEQGFQSLFIGLGPELTRGVLSTAFMLMIKEQIGSFME 335 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig393.10220.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig393.10220.1 >prot_H-paniculata_contig393.10220.1 ID=prot_H-paniculata_contig393.10220.1|Name=mRNA_H-paniculata_contig393.10220.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=386bp MDQAAEAAAAAAGGMFSSAALYPLEVIKTNLQAQTKPKKTSPVTSTRSRPback to top mRNA from alignment at H-paniculata_contig393:25768..35736- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig393.10220.1 ID=mRNA_H-paniculata_contig393.10220.1|Name=mRNA_H-paniculata_contig393.10220.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9969bp|location=Sequence derived from alignment at H-paniculata_contig393:25768..35736- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig393:25768..35736- >mRNA_H-paniculata_contig393.10220.1 ID=mRNA_H-paniculata_contig393.10220.1|Name=mRNA_H-paniculata_contig393.10220.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2316bp|location=Sequence derived from alignment at H-paniculata_contig393:25768..35736- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |