mRNA_H-paniculata_contig393.10219.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig393.10219.1 vs. uniprot
Match: A0A126WZI8_9PHAE (Putative LOV domain-containing protein n=1 Tax=Dictyopteris undulata TaxID=156997 RepID=A0A126WZI8_9PHAE) HSP 1 Score: 377 bits (969), Expect = 1.100e-115 Identity = 217/337 (64.39%), Postives = 254/337 (75.37%), Query Frame = 2
Query: 791 GAEPACQLDERRRRNREHAKRSRMRKSARLGGLENVLLNLKRENARLRQIVKREIPNRAKAILRECAAVNTDADLVAKQSIIQGMRPSMTIGGSSGTNG---GGSLSKQKLQGGNNSGYNSSNLDSHVPSALKLMSPCVQSVKALSESQANFVLTNPNLPGCPIIYVSPGFLELTRYEAGQVLGKNCRFLQGPGTDPGAVSILRNNLMQGRDSSVCILNYKADGTPFWNQLSIGNLLDSQGLVANHIGVLYEVKPMTPGDFRKQLHRVPLPESLLND-SLDSEEDNSQDKMVSRSRHSTAALRPVARICSRSNSGIKMGPA--RVVDSLRRTRAAAS 1783
GAEP L E+RRRNREHAKRSRMRK RLGGLE ++L L+REN RLRQ+VK+ IP+RA+ I+R CA+ N DADLVAKQ ++QGMRPSM + G+SG GGS ++ K+ +S N VPSALKLMSP QSVKALSESQANF+LTNPNLPGCPII+ SPGF++LT YEA QV+GKNCRFLQGPGTDP VSI+R NL +GRD+SVCILNYKADGTPFWNQLSIGNLLDSQG VAN++GVL EVK M DF + LHRVPLPESLLND S DS ++ + K RSR+ A R +A G+ PA RVVD LRRTRAA++
Sbjct: 244 GAEPTSDLSEKRRRNREHAKRSRMRKRMRLGGLEEMVLELRRENVRLRQMVKKGIPDRAEDIIRTCASDNADADLVAKQDVVQGMRPSMAVTGASGWGSRFSGGSRTRPKVD-----SRHSGNKYRSVPSALKLMSPSYQSVKALSESQANFILTNPNLPGCPIIFASPGFVDLTGYEASQVIGKNCRFLQGPGTDPVTVSIIRKNLAEGRDTSVCILNYKADGTPFWNQLSIGNLLDSQGQVANNVGVLCEVKQMPAADFHRLLHRVPLPESLLNDTSSDSGDEAADSKSFGRSRN--AGGRSMA-------DGVAGAPAYPRVVDRLRRTRAASA 566
BLAST of mRNA_H-paniculata_contig393.10219.1 vs. uniprot
Match: A0A126X4A8_9PHAE (Putative LOV domain-containing protein n=5 Tax=Sargassum TaxID=3015 RepID=A0A126X4A8_9PHAE) HSP 1 Score: 360 bits (925), Expect = 4.950e-109 Identity = 224/395 (56.71%), Postives = 267/395 (67.59%), Query Frame = 2
Query: 671 ATAAAAGFIAQNP---SVTLESPEDEEKDEVNGYKRDDREAGGGAEPACQLDERRRRNREHAKRSRMRKSARLGGLENVLLNLKRENARLRQIVKREIPNRAKAILRECAAVNTDADLVAKQSIIQGMRPSMTI----------GGSSGTNGGGSLSKQKLQGGNNSGYNSSNLDSHVPSALKLMSPCVQSVKALSESQANFVLTNPNLPGCPIIYVSPGFLELTRYEAGQVLGKNCRFLQGPGTDPGAVSILRNNLMQGRDSSVCILNYKADGTPFWNQLSIGNLLDSQGLVANHIGVLYEVKPMTPGDFRKQLHRVPLPESLLND-SLDSEEDNSQDKMVSRSRHSTAALRP---VARICSRSNSGIKMGPARVVDSLRRTRAAASPTAGYTA 1804
A AAAA + P S+ E+P+ EE+DE + R+ E G + ++RRRNREHAKRSRMRK RLGGLE ++L+L+REN RLRQI+K+ IP+RA I+R CA NT+AD+VAKQ ++QGMRP+ +I GGSS + S S+ KL+GG G + VPSALKLMSP Q+VKALSESQANF+LTNPNLP CPII+ S GFL+LT YEA +V+GKNCRFLQGPGTDP VSILRNNL GRD+SVCILNYKADGTPFWNQLSIG LLD+ G VANH+GVL EV M P F K LHRVPLPESLL D S DS ED TA ++P AR+ S+ G RVVD LRRTRAAA+ T+
Sbjct: 223 AAAAAAELVKAEPVEGSIDHEAPDSEEEDEDH---RNINENGDELGSCTDVSDKRRRNREHAKRSRMRKRVRLGGLEGMVLSLRRENVRLRQIIKQGIPDRADEIIRMCAKDNTNADMVAKQDVVQGMRPTTSITSSRWKSRGFGGSSSSI---SRSRLKLEGGGEGGRSKERC---VPSALKLMSPSYQTVKALSESQANFILTNPNLPDCPIIFASQGFLDLTGYEASKVIGKNCRFLQGPGTDPMTVSILRNNLASGRDTSVCILNYKADGTPFWNQLSIGVLLDAHGQVANHVGVLCEVNQMPPSMFHKLLHRVPLPESLLADESSDSGED-------------TADIKPNMYSARLGRSSSLGGSESAPRVVDRLRRTRAAAATAPASTS 595
BLAST of mRNA_H-paniculata_contig393.10219.1 vs. uniprot
Match: A0A126X144_SACJA (Putative LOV domain-containing protein n=3 Tax=Saccharina japonica TaxID=88149 RepID=A0A126X144_SACJA) HSP 1 Score: 349 bits (896), Expect = 2.560e-106 Identity = 205/346 (59.25%), Postives = 239/346 (69.08%), Query Frame = 2
Query: 785 GGGAEPACQLDERRRRNREHAKRSRMRKSARLGGLENVLLNLKRENARLRQIVKREIPNRAKAILRECAAVNTDADLVAKQSIIQGMRPSMTIGGSSGTNGGGSL---------SKQKLQGGNNSGYNSSNLDSHVPSALKLMSPCVQSVKALSESQANFVLTNPNLPGCPIIYVSPGFLELTRYEAGQVLGKNCRFLQGPGTDPGAVSILRNNLMQGRDSSVCILNYKADGTPFWNQLSIGNLLDSQGLVANHIGVLYEVKPMTPGDFRKQLHRVPLPESLLNDSLDSEEDNSQDKMVS----RSRHSTAALRPVARICSRSNSGIKMGPARVVDSLRRTRAAAS 1783
G + +L ++RRRNREHAKRSR+RK RLGGLE ++L L+REN RLR+IVK+ IP RA +ILR CA+ NT+ D VAKQ ++QGMRP M++G SS +N L S+ KL+GG + + D VPSALKLMSPC QSVKAL+ESQANFVLTNPNLP CPII+ S GFLELT YE QV+GKNCRFLQGPGTDPG VSI+RNNL GRD+SVCILNYKADGTPFWNQLSIG LLD+ G VANH+GVL EV M P F + LHRVPLPESLLND ED+S D MV+ + RVVD LRRTRAAA+
Sbjct: 135 GEELDTGSELTDKRRRNREHAKRSRLRKRVRLGGLEEMVLGLRRENVRLRRIVKKGIPERADSILRLCASDNTNPDTVAKQDVVQGMRPGMSVGSSS-SNWSSRLGXXXXXXXRSRPKLEGGTRR-HGGGSKDRRVPSALKLMSPCYQSVKALAESQANFVLTNPNLPDCPIIFASQGFLELTGYEGRQVIGKNCRFLQGPGTDPGTVSIIRNNLAGGRDTSVCILNYKADGTPFWNQLSIGVLLDAHGQVANHVGVLCEVNQMPPAVFHRLLHRVPLPESLLNDESSDSEDSS-DTMVNVGTTXXXXXXXXXXXXXXXXXXXXXXXXVSSPRVVDRLRRTRAAAA 477
BLAST of mRNA_H-paniculata_contig393.10219.1 vs. uniprot
Match: A0A126WV95_9PHAE (Putative LOV domain-containing protein n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A126WV95_9PHAE) HSP 1 Score: 347 bits (890), Expect = 1.900e-104 Identity = 203/336 (60.42%), Postives = 241/336 (71.73%), Query Frame = 2
Query: 791 GAEPACQLDERRRRNREHAKRSRMRKSARLGGLENVLLNLKRENARLRQIVKREIPNRAKAILRECAAVNTDADLVAKQSIIQGMRPSMTIGGSSGTNGGGSLSKQKLQGGNNS-----GYNSSNLDSHVPSALKLMSPCVQSVKALSESQANFVLTNPNLPGCPIIYVSPGFLELTRYEAGQVLGKNCRFLQGPGTDPGAVSILRNNLMQGRDSSVCILNYKADGTPFWNQLSIGNLLDSQGLVANHIGVLYEVKPMTPGDFRKQLHRVPLPESLLNDSLDSEEDNSQDKMVSRSRHSTAALRPVARICSRSNSGIKMGPARVVDSLRRTRAAAS 1783
GA +L E+RRRNREHAKRSRMRK RLGGLE +L L+REN RLRQIVK+ IP+RA I+R CA+ NTDADLV KQ ++QGMRP MT +S G G+ + ++++ NN+ G S+ D VPSALKLMSP QSV AL+ESQANF+LTNPNLP CPII+ SPGF++LT Y+A V+GKNCRFLQG GTDP VSI+RNNL GRD+SVCILNYKADGTPFWNQLSIG LLDS G VANH+GVL EVK M P DF + LHRVPLPESLL D DS +D S ++S + +L R S P + VD LRRTRA++S
Sbjct: 231 GAGFGSELSEKRRRNREHAKRSRMRKRVRLGGLEEAVLELRRENVRLRQIVKQGIPDRADDIIRTCASDNTDADLVDKQDVVQGMRPGMTT--NSLAAGWGTRTSERVR--NNARVEGGGRKPSSRDLRVPSALKLMSPSYQSVTALAESQANFILTNPNLPDCPIIFASPGFMDLTGYDASDVIGKNCRFLQGAGTDPVTVSIIRNNLTDGRDTSVCILNYKADGTPFWNQLSIGVLLDSHGRVANHVGVLCEVKQMPPADFHRLLHRVPLPESLLVDDSDSGDDLSDGCGRAQSNVRSTSL------VDRQESNSPAAP-KTVDRLRRTRASSS 555
BLAST of mRNA_H-paniculata_contig393.10219.1 vs. uniprot
Match: A0A126X2D8_9PHAE (Putative LOV domain-containing protein n=1 Tax=Scytosiphon dotyi TaxID=180438 RepID=A0A126X2D8_9PHAE) HSP 1 Score: 340 bits (873), Expect = 3.990e-100 Identity = 202/355 (56.90%), Postives = 242/355 (68.17%), Query Frame = 2
Query: 809 QLDERRRRNREHAKRSRMRKSARLGGLENVLLNLKRENARLRQIVKREIPNRAKAILRECAAVNTDADLVAKQSIIQGMRPSMTIGGSSGTNG--GGSLSKQKLQGGNNSGYNS-------------SNLDSHVPSALKLMSPCVQSVKALSESQANFVLTNPNLPGCPIIYVSPGFLELTRYEAGQVLGKNCRFLQGPGTDPGAVSILRNNLMQGRDSSVCILNYKADGTPFWNQLSIGNLLDSQGLVANHIGVLYEVKPMTPGDFRKQLHRVPLPESLLNDSLDSEED-----NSQDKMVSRSR-------HSTAALRPVARICSRSN---SGIKMGPARVVDSLRRTRAAAS 1783
+L ++RRRNREHAKRSR+RK RLGGLE ++L L+REN RLRQ+V R IP+RA AI+R CA NT+ADLVAKQ ++QGMRP M++G SS + GG+ S+ KL+GG++S + D VPSALKLMSP Q+VKAL++SQANF LTNPNLP CPII+ S GFLELT YE V+G+NCRFL+GPGTDP +SI+RNN+ GRD+SVCILNYK DGTPFWNQLSIG LLD+ G VANH+ V YEV PM P F + LHRVPLPESLLND SE D N + V RS HS+A SG + RVVD LRRTRAAA+
Sbjct: 358 ELTDKRRRNREHAKRSRLRKRVRLGGLEEMVLGLRRENVRLRQMVMRGIPDRAGAIIRACAKDNTNADLVAKQDVVQGMRPGMSVGSSSSSWSARGGTRSRPKLEGGSSSSRRXXXXXXXXXXXXXXGSKDRRVPSALKLMSPSYQTVKALADSQANFFLTNPNLPDCPIIFASQGFLELTGYEGKDVIGRNCRFLEGPGTDPVTLSIVRNNVEAGRDASVCILNYKKDGTPFWNQLSIGVLLDAHGQVANHVAVTYEVNPMPPAVFHRLLHRVPLPESLLNDESGSESDGDSNSNHRRDPVERSEVAAGSFNHSSAXXXXXXXXXXXXXXXXSGAGVAVPRVVDRLRRTRAAAA 712
BLAST of mRNA_H-paniculata_contig393.10219.1 vs. uniprot
Match: A0A126X3Q0_PETFA (Putative LOV domain-containing protein n=1 Tax=Petalonia fascia TaxID=2893 RepID=A0A126X3Q0_PETFA) HSP 1 Score: 340 bits (873), Expect = 4.300e-100 Identity = 197/350 (56.29%), Postives = 241/350 (68.86%), Query Frame = 2
Query: 809 QLDERRRRNREHAKRSRMRKSARLGGLENVLLNLKRENARLRQIVKREIPNRAKAILRECAAVNTDADLVAKQSIIQGMRPSMTIGGSSGTNG--GGSLSKQKLQGGNNS--------GYNSSNLDSHVPSALKLMSPCVQSVKALSESQANFVLTNPNLPGCPIIYVSPGFLELTRYEAGQVLGKNCRFLQGPGTDPGAVSILRNNLMQGRDSSVCILNYKADGTPFWNQLSIGNLLDSQGLVANHIGVLYEVKPMTPGDFRKQLHRVPLPESLLNDSLDSEED---NSQDKMVSRSRHSTAA------------LRPVARICSRSNSGIKMGPARVVDSLRRTRAAAS 1783
+L ++RRRNREHAKRSR+RK RLGGLE ++L L+REN RLRQ+V R IP+RA +I+R CA NT+ADLVAKQ ++QGMRP M++G SS + GG+ S+ KL+GG++S G + + D VPSALKLMSPC Q+VKAL++SQANF+LTNPNLP CPII+ S GFLELT YE V+G+NCR LQGPGTDP +SI+R+N+ GRD+SVCILNYK DG PFWNQLSIG LLD+ G VANH+ V+YEV PM P F + LHRVPLPESLLND S+ D NS+D+ R AA RVVD LRRTRAAA+
Sbjct: 361 ELTDKRRRNREHAKRSRLRKRVRLGGLEEMVLGLRRENVRLRQMVMRGIPDRAGSIIRACAKDNTNADLVAKQDVVQGMRPGMSVGSSSSSWSARGGTRSRPKLEGGSSSRKRGSGGRGGGTGSKDRRVPSALKLMSPCYQTVKALADSQANFILTNPNLPDCPIIFASQGFLELTGYEGKDVIGRNCRLLQGPGTDPITLSIVRDNVEAGRDASVCILNYKKDGAPFWNQLSIGVLLDAHGQVANHVAVMYEVNPMPPAVFHRLLHRVPLPESLLNDDSGSDSDGEINSKDRRDPVERSEVAAGSFNHSSVGGXXXXXXXXXXXXXXXXXXXXXPRVVDRLRRTRAAAA 710
BLAST of mRNA_H-paniculata_contig393.10219.1 vs. uniprot
Match: A0A6H5K3S9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3S9_9PHAE) HSP 1 Score: 332 bits (852), Expect = 3.720e-97 Identity = 194/363 (53.44%), Postives = 241/363 (66.39%), Query Frame = 2
Query: 761 YKRDDREAGGGAEPACQLDERRRRNREHAKRSRMRKSARLGGLENVLLNLKRENARLRQIVKREIPNRAKAILRECAAVNTDADLVAKQSIIQGMRPSMTIGGSSG--TNGGGSLSKQKLQGGNNSGYNSSNLDSHVPSALKLMSPCVQSVKALSESQANFVLTNPNLPGCPIIYVSPGFLELTRYEAGQVLGKNCRFLQGPGTDPGAVSILRNNLMQGRDSSVCILNYKADGTPFWNQLSIGNLLDSQGLVANHIGVLYEVKPMTPGDFRKQLHRVPLPESLLNDSLDSEEDNSQDKMVS--------------------RSRHSTAALRPVARICSRSNSGIKMGPARVVDSLRRTRAAAS 1783
Y DD +A +L ++RRRNREHAKRSR+RK RLGGLE +LL L+REN RLR+++ R IP+RA AI+R C NT+AD+VAKQ +IQGMRP M++G SS T GG+ ++ K G G S +VPSALKLMSPC Q+VKAL++SQANFVLTNPNLP CPII+ S GFL+LT Y+ V+GKNCRFLQGPGTDP +SI+RNN+ G D+SVCILNYK D T FWNQLSIG LLDS G VANH+GV+ EV M P F + LHRVPLPESLL+D DS+ D + VS R+R S+ + + + + +R+VD L RTRAAA+
Sbjct: 348 YDEDDLDADDDDPAGTELTDKRRRNREHAKRSRLRKRVRLGGLEELLLGLRRENVRLRKVIMRGIPDRAGAIIRNCTKDNTNADVVAKQDVIQGMRPGMSVGSSSSSWTARGGTRTRPKPAG----GXXXSGKGRYVPSALKLMSPCYQTVKALADSQANFVLTNPNLPDCPIIFASQGFLDLTGYDGNDVIGKNCRFLQGPGTDPVTLSIIRNNVAAGLDTSVCILNYKKDKTQFWNQLSIGVLLDSHGQVANHVGVMCEVNQMPPAVFHRLLHRVPLPESLLHDDSDSDSDGHDNHRVSXXXXXXXXXXXXXXXXXXXXRARASSVS----GDVPDKGAAXXXXASSRIVDRLHRTRAAAA 702
BLAST of mRNA_H-paniculata_contig393.10219.1 vs. uniprot
Match: A0A126WUS5_9PHAE (Putative LOV domain-containing protein n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A126WUS5_9PHAE) HSP 1 Score: 315 bits (806), Expect = 1.230e-92 Identity = 199/418 (47.61%), Postives = 253/418 (60.53%), Query Frame = 2
Query: 653 GCTESLATAAAAGFIAQNPSVTLESPEDEEK--------DEVNGYKRDDREAGGGAEPACQ---LDERRRRNREHAKRSRMRKSARLGGLENVLLNLKRENARLRQIVKREIPNRAKAILRECAAVNTDADLVAKQSIIQGMRPSMTIG-------------------GSSGTNGGGSLSKQKLQGGNNSGYNSSNLDSHVPSALKLMSPCVQSVKALSESQANFVLTNPNLPGCPIIYVSPGFLELTRYEAGQVLGKNCRFLQGPGTDPGAVSILRNNLMQGRDSSVCILNYKADGTPFWNQLSIGNLLDSQGLVANHIGVLYEVKPMTPGDFRKQLHRVPLPESLLNDSLDSEEDNSQDKMVSRSRHSTAALRPVARICSRSNSGIKMGPAR-----------VVDSLRRTRAAAS 1783
G +E ++ A I Q+ VT+++ + K D N DDR A G+ +C+ L ++RRRNREHAK+SR+RK A LGGLE LL L+REN LRQ+ K+ IP+RA+ I+RECA V+TD D+V K+ I+QGMRPS +I S GG S +L+G +G + VPSA KLMSP V AL+ESQANFVLTNPN+PG PI++ S GF LT Y A QV+G+NCRFLQG GTDP VSILRNN+ GRD+SVCILNYKA GTPFWNQLS+G LLD++G +ANH+GV+YE+K M DF + LHRVPLPE LL D +++ D M + A P R N+G K G + VVDSLRRTRA ++
Sbjct: 118 GSSEGPSSDAVRSNIGQSERVTVKNCSFDVKSVASNPGHDSANFIVHDDRIAEYGSGESCEENELSDKRRRNREHAKQSRLRKRALLGGLEETLLELRRENMCLRQLAKKTIPDRAENIIRECAYVSTDPDVVVKRDIVQGMRPSSSISFRISQATSHASHEKLHGRVSPSENRGGTSNGSTELRGRGRAGRDRE----RVPSATKLMSPSHHVVSALAESQANFVLTNPNIPGSPIVFASQGFQALTGYAAEQVVGRNCRFLQGVGTDPMVVSILRNNIAHGRDTSVCILNYKACGTPFWNQLSVGTLLDAEGRIANHVGVMYEIKQMPQADFHRLLHRVPLPEKLLQDESSEDDERESDLM-----DNEGATNPSK--SQRGNTGAKGGQGQSVGGGGKARTHVVDSLRRTRAGSA 524
BLAST of mRNA_H-paniculata_contig393.10219.1 vs. uniprot
Match: A0A126WUW4_9PHAE (Putative LOV domain-containing protein n=1 Tax=Punctaria latifolia TaxID=90013 RepID=A0A126WUW4_9PHAE) HSP 1 Score: 278 bits (711), Expect = 9.260e-82 Identity = 173/324 (53.40%), Postives = 204/324 (62.96%), Query Frame = 2
Query: 896 VLLNLKRENARLRQIVKREIPNRAKAILRECAAVNTDADLVAK---QSIIQGMRPSMTIGGSSGTNG--GGSLSKQKLQGGNNSGYNSSN--LDSHVPSALKLMSPCVQSVKALSESQANFVLTNPNLPGCPIIYVSPGFLELTRYEAGQVLGKNCRFLQGPGTDPGAVSILRNNLMQGRDSSVCILNYKADGTPFWNQLSIGNLLDSQGLVANHIGVLYEVKPMTPGDFRKQLHRVPLPESLLNDSLDSEEDNSQDKMVSRSRHSTAALRPVARICSRSNSGI---------------------KMGPARVVDSLRRTRAAAS 1783
++L L+REN RLRQ+V IP+RA AI+R CA N Q ++QGMRP M++G SS + GG+ + K +GG+ G SS D VPSALKLMSP Q+VKAL +SQANF+LTNPNLP CPII+ S GFLELT YE V+GKNCRFLQGPGTD +SI+RNNL GRD SVCILNYK +GTPFWNQLS+G LLD+ G VANH+GV+ EV M P F + LHRVPLPESLL+D SE D D V RSR S + R NS GP RVVD LRRTRAAA+
Sbjct: 1 MVLGLRRENVRLRQLVMSGIPDRAAAIIRTCAKGNXXXXXXXXXXXQDVVQGMRPGMSVGSSSASWSARGGTRKRIKAEGGSGGGGVSSGGRKDHRVPSALKLMSPSYQTVKALVDSQANFILTNPNLPDCPIIFASQGFLELTGYEGKDVIGKNCRFLQGPGTDKMTLSIVRNNLAAGRDVSVCILNYKKNGTPFWNQLSVGVLLDAHGQVANHVGVMCEVSQMPPPVFHRLLHRVPLPESLLHDDSGSESDGVDDH-VERSRVSAGSFRHSDGTKGGGNSXXXXXXXXXXXXXXXXXXSAARSSTGP-RVVDRLRRTRAAAA 322
BLAST of mRNA_H-paniculata_contig393.10219.1 vs. uniprot
Match: A0A126WZ47_SARFS (Putative LOV domain-containing protein n=1 Tax=Sargassum fusiforme TaxID=590727 RepID=A0A126WZ47_SARFS) HSP 1 Score: 276 bits (706), Expect = 1.760e-81 Identity = 164/277 (59.21%), Postives = 188/277 (67.87%), Query Frame = 2
Query: 986 CAAVNTDADLVAKQSIIQGMRPSMTI----------GGSSGTNGGGSLSKQKLQGGNNSGYNSSNLDSHVPSALKLMSPCVQSVKALSESQANFVLTNPNLPGCPIIYVSPGFLELTRYEAGQVLGKNCRFLQGPGTDPGAVSILRNNLMQGRDSSVCILNYKADGTPFWNQLSIGNLLDSQGLVANHIGVLYEVKPMTPGDFRKQLHRVPLPESLLND-SLDSEEDNSQDKMVSRSRHSTAALRPVARICSRSNSGIKMGPARVVDSLRRTRAAAS 1783
CA NT+AD+VAKQ ++QGMRP+ +I GGSS + S+ KL GG G + + VPSALKLMSP Q+VKALSESQANF+LTNPNLP CPII+ S GFL+LT YEA +V+GKNCRFLQGPGTDP VSILRNNL GRD+SVCILNYKADGTPFWNQLSIG LLD+ G VANH+GVL EV M P F K LHRVPLPESLL D S DS ED + K S AR+ + G +RVVD LRRTR + S
Sbjct: 2 CARDNTNADMVAKQDVVQGMRPTTSITSSRWKSRGFGGSSSSI---PRSRLKLDGGGEGGRSK---EHRVPSALKLMSPSYQTVKALSESQANFILTNPNLPDCPIIFASQGFLDLTGYEASKVIGKNCRFLQGPGTDPMTVSILRNNLASGRDTSVCILNYKADGTPFWNQLSIGVLLDAHGQVANHVGVLCEVNQMPPSMFHKLLHRVPLPESLLADESSDSGEDTADTKPNIYS----------ARMGRSGSLGSSESASRVVDRLRRTRCSGS 262 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig393.10219.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig393.10219.1 >prot_H-paniculata_contig393.10219.1 ID=prot_H-paniculata_contig393.10219.1|Name=mRNA_H-paniculata_contig393.10219.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=570bp MDIADAHAAAGGGSAAVGTTADAQTGKSLLDAFSFWSCSPSFDHRSSYSEback to top mRNA from alignment at H-paniculata_contig393:12985..23670- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig393.10219.1 ID=mRNA_H-paniculata_contig393.10219.1|Name=mRNA_H-paniculata_contig393.10219.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10686bp|location=Sequence derived from alignment at H-paniculata_contig393:12985..23670- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig393:12985..23670- >mRNA_H-paniculata_contig393.10219.1 ID=mRNA_H-paniculata_contig393.10219.1|Name=mRNA_H-paniculata_contig393.10219.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3420bp|location=Sequence derived from alignment at H-paniculata_contig393:12985..23670- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |