mRNA_H-paniculata_contig3922.10207.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3922.10207.1 vs. uniprot
Match: A0A6H5L3G3_9PHAE (Beta_helix domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3G3_9PHAE) HSP 1 Score: 176 bits (445), Expect = 2.460e-50 Identity = 89/164 (54.27%), Postives = 116/164 (70.73%), Query Frame = 1
Query: 13 QDALDILQPGDTVEIEEGDYWEDITTMVDGTVEEPITIRGSG---DVSEIRLRGSDDNDYRLMHIRHDNYIVEGFTIDGMV-----RETDSINYQTDIRNKLLYVLPEREHTERSGGYRSALDGLVVRNMVLKNAGGECLRLRYFVTNAEIYDNEITNCGIYDF 480
QDALD++ PGD +E+ GDYWED+ T DGT + PITIRG+G D + LRG+ + R++ I+HD YIVE FT++G R+ DS + Q R+ L+Y + RE TER+GGY SA+DGLV+RNM + NAGGEC+RLR VTNAE+Y N IT+CGIYDF
Sbjct: 34 QDALDVVNPGDVIELSNGDYWEDLKTRTDGTADMPITIRGAGGTGDKENVVLRGAGTST-RVLEIKHDYYIVEDFTVNGHAEGDPDRDADSDSAQDMWRDVLIYAVANREPTERAGGYISAIDGLVIRNMAVTNAGGECIRLRDHVTNAEVYSNHITDCGIYDF 196
BLAST of mRNA_H-paniculata_contig3922.10207.1 vs. uniprot
Match: A0A6H5JYT7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYT7_9PHAE) HSP 1 Score: 169 bits (428), Expect = 7.350e-46 Identity = 87/164 (53.05%), Postives = 115/164 (70.12%), Query Frame = 1
Query: 13 QDALDILQPGDTVEIEEGDYWEDITTMVDGTVEEPITIRGSG---DVSEIRLRGSDDNDYRLMHIRHDNYIVEGFTIDGMV-----RETDSINYQTDIRNKLLYVLPEREHTERSGGYRSALDGLVVRNMVLKNAGGECLRLRYFVTNAEIYDNEITNCGIYDF 480
QDALD++ PGD +E+ GDYWED+ T DGTV+ PITIRG+G D + LRG+ + R++ I+HD YIVE FT++G R+ DS + + R+ L+Y + RE TER GGY SA+DGLV+RNM + NAGGEC+RLR VT AE+Y N IT+CGI+DF
Sbjct: 39 QDALDVVNPGDVIELGNGDYWEDLKTRTDGTVDMPITIRGAGGTDDRENVVLRGAGTST-RVLEIKHDYYIVEDFTVNGDAEDDPDRDADSDSPEDMWRDVLIYAVANREPTERDGGYVSAIDGLVIRNMAVTNAGGECIRLRDHVTYAEVYSNHITDCGIFDF 201
BLAST of mRNA_H-paniculata_contig3922.10207.1 vs. uniprot
Match: A0A6H5L8H5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8H5_9PHAE) HSP 1 Score: 166 bits (421), Expect = 6.490e-45 Identity = 86/164 (52.44%), Postives = 114/164 (69.51%), Query Frame = 1
Query: 13 QDALDILQPGDTVEIEEGDYWEDITTMVDGTVEEPITIRGSG---DVSEIRLRGSDDNDYRLMHIRHDNYIVEGFTIDGMV-----RETDSINYQTDIRNKLLYVLPEREHTERSGGYRSALDGLVVRNMVLKNAGGECLRLRYFVTNAEIYDNEITNCGIYDF 480
QDALD++ PGD +E+ GDYWED+ T DGTV+ PITIRG+G D + LRG+ + R++ I+HD YIVE FT++G R+ DS + + R+ L+Y + RE TER GGY SA+DGLV+RNM + NAGGEC+RLR VT AE+Y N I +CGIYD+
Sbjct: 40 QDALDVVNPGDVIELGNGDYWEDLKTRTDGTVDMPITIRGAGGTDDRENVVLRGAGTST-RVLEIKHDYYIVEDFTVNGDAEDDPDRDADSDSPEDMWRDVLIYAVANREPTERDGGYVSAIDGLVIRNMAVTNAGGECIRLRDHVTYAEVYSNYIIDCGIYDY 202
BLAST of mRNA_H-paniculata_contig3922.10207.1 vs. uniprot
Match: D7FIS4_ECTSI (Putative nosD copper-binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIS4_ECTSI) HSP 1 Score: 139 bits (350), Expect = 6.300e-36 Identity = 73/154 (47.40%), Postives = 101/154 (65.58%), Query Frame = 1
Query: 13 QDALDILQPGDTVEIEEGDYWEDITTMVDGTVEEPITIRGSG---DVSEIRLRGSDDNDYRLMHIRHDNYIVEGFTIDGMVRETDSINYQTDI-----RNKLLYVLPEREHTERSGGYRSALDGLVVRNMVLKNAGGECLRLRYFVTNAEIYDN 450
+DALD + PGD +E+ GDYWED+ T DGT + PITIRG+ D + LRG D R++ I+HD YI+E FT+DG + + N +D R+ L+Y + +RE TER GGY S LDGLV+RNM L NAGGEC+RLR T+++ +++
Sbjct: 17 KDALDEVNPGDVIELGHGDYWEDLKTRTDGTADMPITIRGAAGTDDRENVVLRG-DGTSSRVLEIKHDYYIIEDFTVDGDAEDDPNRNSDSDSAEDMWRDILIYAIADREPTERDGGYVSTLDGLVIRNMKLANAGGECIRLRDVGTSSDQWED 169
BLAST of mRNA_H-paniculata_contig3922.10207.1 vs. uniprot
Match: A0A6H5JK02_9PHAE (Beta_helix domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK02_9PHAE) HSP 1 Score: 123 bits (308), Expect = 1.510e-29 Identity = 69/163 (42.33%), Postives = 99/163 (60.74%), Query Frame = 1
Query: 13 QDALDILQPGDTVEIEEGDYWEDITTMVDGTVEEPITIRGSGDVSEIRLRGSDDNDYRLMHIRHDNYIVEGFTIDGMVRET-DSINYQTDIRNKLLYVLPERE---HTERSG-GYRSALDGLVVRNMVLKNAGGECLRLRYFVTNAEIYDNEITNCGIYDFVY 486
Q ALD PG T+ IE G Y E + + VDGT E+PIT++G ++GSD + + I HD Y++ FTIDG+++E + N + R K L V R+ HT G Y+SA+DG+V++NM + N GGE +R+RYFVTN ++ N IT+ G YDF +
Sbjct: 372 QAALDAASPGTTILIEAGTYHEALKSRVDGTKEQPITLQGPSSGPTAIIKGSDKSG-TCVEINHDYYVLNDFTIDGLIKEDCNKDNVRECFRAKCLAVRGNRQPRDHTNEKGVAYKSAVDGVVIKNMKIYNCGGEGIRIRYFVTNCVLFHNRITSTGCYDFKF 533
BLAST of mRNA_H-paniculata_contig3922.10207.1 vs. uniprot
Match: Q8QKV2_ESV1K (EsV-1-164 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QKV2_ESV1K) HSP 1 Score: 122 bits (307), Expect = 2.000e-29 Identity = 70/161 (43.48%), Postives = 106/161 (65.84%), Query Frame = 1
Query: 13 QDALDILQPGDTVEIEEGDYWEDITTMVDGTVEEPITIRGSGDVSEIRLRGSDDNDYRLMHIRHDNYIVEGFTIDGMVRETDSINYQTDIRNKLLYVLPERE--HTERSGG-YRSALDGLVVRNMVLKNAGGECLRLRYFVTNAEIYDNEITNCGIYDFVY 486
Q AL++ QPGDT+E+++G+Y ED+TT+ DG ++ I I GS D LRG + RL + H ++GFTIDG++ + + + +TD ++ L+Y+ RE E+ G +RSA DG+++ NM L+ A GEC+R RYFV+N EI+ EI +CGI DFV+
Sbjct: 28 QAALELAQPGDTIELKDGEYREDLTTVRDGEPDKRIIITGSRDAV---LRGGG-KEARLFQVMHSYITLDGFTIDGLL--SGNGDAETDYQDMLIYITAHRETREIEQYGTKFRSAQDGVIISNMKLERALGECVRARYFVSNLEIFGCEIADCGIGDFVF 182
BLAST of mRNA_H-paniculata_contig3922.10207.1 vs. uniprot
Match: D8LPI3_ECTSI (EsV-1-164 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPI3_ECTSI) HSP 1 Score: 120 bits (301), Expect = 1.310e-28 Identity = 66/161 (40.99%), Postives = 99/161 (61.49%), Query Frame = 1
Query: 13 QDALDILQPGDTVEIEEGDYWEDITTMVDGTVEEPITIRGSGDVSEIRLRGSDDNDYRLMHIRHDNYIVEGFTIDGMVRETDSINYQTDIRNKLLYVLPERE-HTERSGG--YRSALDGLVVRNMVLKNAGGECLRLRYFVTNAEIYDNEITNCGIYDFVY 486
Q+A+++ QPGDTVE+++G+Y ED+ T+ DG ++ IT+ G G + ++ G + RL I H V+GF +DG + + D + D K +Y RE R G +RSA+DGL++ NM + N GGEC R RYFVTN E + + + NCG+YDFV+
Sbjct: 31 QEAIELAQPGDTVELKDGEYTEDLVTVRDGEPDKRITLSG-GRGAVLKGTGKES---RLFQIHHSYTTVDGFVLDGKIGKGDKAEHYVD---KGIYAHGNRETRVIRQYGEEFRSAIDGLIISNMKIINFGGECTRFRYFVTNLEFFGSHLENCGVYDFVF 184
BLAST of mRNA_H-paniculata_contig3922.10207.1 vs. uniprot
Match: A0A7V4PDA4_9BACT (Beta_helix domain-containing protein n=1 Tax=Candidatus Moranbacteria bacterium TaxID=2045217 RepID=A0A7V4PDA4_9BACT) HSP 1 Score: 116 bits (291), Expect = 5.160e-28 Identity = 68/159 (42.77%), Postives = 101/159 (63.52%), Query Frame = 1
Query: 13 QDALDILQPGDTVEIEEGDYWEDITTMVDGTVEEPITIRGSGDVSEIRLRGSDDNDYRLMHIRHDNYIVEGFTIDGMVRE-TDSINYQTDIRNKLLYVLPEREHTERSGGYRSALDGLVVRNMVLKNAGGECLRLRYFVTNAEIYDNEITNCGIYDFVY 486
QDA+D QPGD V + EG+Y++D + +G E+PITI GS S+ ++GS N R++ I HD ++GF++DG+ + +D NY R+KL+YV + E++ G + GL ++ M +KNAGGEC+RLRYF EI N I NCG+YDF++
Sbjct: 94 QDAVDKAQPGDGVMLLEGEYFQDFVSARNGLKEKPITIYGS---SKAVIKGSGKNS-RIIEINHDYIFLKGFSVDGLSGDASDKKNY----RDKLIYV----QGKEKNKG----VTGLQIKEMTIKNAGGECIRLRYFAQENEISHNVIKNCGVYDFLF 236
BLAST of mRNA_H-paniculata_contig3922.10207.1 vs. uniprot
Match: D7G3L7_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3L7_ECTSI) HSP 1 Score: 114 bits (284), Expect = 3.790e-27 Identity = 63/164 (38.41%), Postives = 95/164 (57.93%), Query Frame = 1
Query: 13 QDALDILQPGDTVEIEEGDYWEDITTMVDGTVEEPITIRGSGDVSEIRLRGSDDNDYRLMHIRHDNYIVEGFTIDGMVRETDSINYQTDIRNKLLYVLPEREHTERSGG-------YRSALDGLVVRNMVLKNAGGECLRLRYFVTNAEIYDNEITNCGIYDFV 483
Q ALD +PGDT+ + G+YWE T G + ITI G + ++ DND + I H Y ++ FTIDG + + I+ K LYV R++ +++ +RS+++GLV+ NM + N GGEC+R+RYFVT +++Y+N ITNCG +DFV
Sbjct: 40 QSALDKAKPGDTLRLAPGEYWETAVTKTAGREDAYITIEGETYGAIVKGDQDIDNDGYALKIEHSYYRLDRFTIDGKHSKNNYID-------KCLYVQQNRDNDDKAKKIKFNGHKFRSSINGLVLSNMDINNCGGECVRMRYFVTYSQVYNNRITNCGTHDFV 196
BLAST of mRNA_H-paniculata_contig3922.10207.1 vs. uniprot
Match: K2EPK7_9BACT (Beta_helix domain-containing protein n=3 Tax=Bacteria TaxID=2 RepID=K2EPK7_9BACT) HSP 1 Score: 112 bits (281), Expect = 1.540e-26 Identity = 60/158 (37.97%), Postives = 94/158 (59.49%), Query Frame = 1
Query: 13 QDALDILQPGDTVEIEEGDYWEDITTMVDGTVEEPITIRGSGDVSEIRLRGSDDNDYRLMHIRHDNYIVEGFTIDGMVRETDSINYQTDIRNKLLYVLPEREHTERSGGYRSALDGLVVRNMVLKNAGGECLRLRYFVTNAEIYDNEITNCGIYDFVY 486
Q A+D+ Q G+T+ + +G Y +D + +G ++ PI I+G+ +E ++G R++ I HD I++GFT+DG DS R+KL+Y L + ++ + GL ++NM +KNAGGEC+RLRYF T EI +N ITNCG+ DF +
Sbjct: 102 QKAIDLAQSGETINLTKGTYLQDFVSKRNGNIDAPIIIKGT---AESIVKGGGKG--RVIEINHDYIILDGFTVDGFF---DSAKKAESYRDKLIYALGKEN--------KNGVSGLKIKNMSIKNAGGECIRLRYFATKNEIVNNVITNCGVVDFKF 243 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3922.10207.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3922.10207.1 >prot_H-paniculata_contig3922.10207.1 ID=prot_H-paniculata_contig3922.10207.1|Name=mRNA_H-paniculata_contig3922.10207.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=162bp SFADQDALDILQPGDTVEIEEGDYWEDITTMVDGTVEEPITIRGSGDVSEback to top mRNA from alignment at H-paniculata_contig3922:13648..15796+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3922.10207.1 ID=mRNA_H-paniculata_contig3922.10207.1|Name=mRNA_H-paniculata_contig3922.10207.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2149bp|location=Sequence derived from alignment at H-paniculata_contig3922:13648..15796+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3922:13648..15796+ >mRNA_H-paniculata_contig3922.10207.1 ID=mRNA_H-paniculata_contig3922.10207.1|Name=mRNA_H-paniculata_contig3922.10207.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=972bp|location=Sequence derived from alignment at H-paniculata_contig3922:13648..15796+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |