mRNA_H-paniculata_contig3921.10205.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3921.10205.1 vs. uniprot
Match: A0A7D9JFU5_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9JFU5_PARCT) HSP 1 Score: 317 bits (812), Expect = 6.560e-99 Identity = 193/519 (37.19%), Postives = 290/519 (55.88%), Query Frame = 1
Query: 1 EPKPAVEALKSPEADKWRAAMEEEWRALVENGTWESEDPGRLTVGRKAIRTKWVFKRKLKGDGSVARYEARLVTQGFSQVEGEGFFETSAPVARMSTLRTIFSMAVEHDFELEGMDVDAAYLNASVEEGLFVKLPPEFSPFSRDIPFVRC-LRKSLYRLKQSGRNRNNTLDDFLVGIGLQRSTTDLCFY---FSRDEGGETDLLMVVYVDDLV-IARRREKVDKFKHNISRRFKMKDLGSLSRVLRIEVRRDRPNGTISISQGGYIREVLRRYGIDECRVVPIPVDGKVKILAPESADKPSESKPLGAVLGMVGPLIYALTGTRSDIAYTVYQAARRMEDPCREDFSTRKRIFRYLSTVPDLGITFGGKSNN--------GHPE-----DVDNRKSTTGYVFKLNGSAISWCSRNQ*LVTWSSTEAEYVGAGEARKETVYLRDLLGSICFGCRGS--TTLFEDNKSAINLSKGSGAHCKTKHIGGRWHRIREWVREGILALKYVQTGNQLADILTKGLS 1497
EP+ EAL A KW+ A++EE+ +L+ N TWE P G I +KWV K K DG+V R++ARLV QG+SQ G + E +PVAR S++RT+ ++A +H+ E+ MDV A+LN +E +++ P F ++ P C L+KSLY LKQS R N TLD FL G ++S D C Y D G + +++ VYVDD++ I+ ++ K + + F+M D G + +L + ++RDR T+ ISQ Y+ VL R+G+ C+ + P++ E E +G L Y T TR DI+ V + M +P +E ++ KR+ RY+ + G+ F N+ G+ + DVD+R+ST+GYVFK+ S +SWCS+ Q VT S+TEAEYV +A +E +++R LL I GC+ TT++EDN+ AI +SK + H +TKHI R+H +RE V + + Y T + LADI+TKGL+
Sbjct: 13 EPQSISEALNGANASKWKQALKEEYNSLISNETWELVPP---PEGCNVIGSKWVMKIKRDADGNVDRHKARLVAQGYSQTPGINYEEVFSPVARHSSIRTLLALANKHNLEIHQMDVKTAFLNGYIEHDIYMSQPDGF--VDQEHPEYVCKLKKSLYGLKQSARCWNQTLDSFLTKNGYRKSNADNCIYVKSIKNDNGFISFVILAVYVDDIIPISNDINMLNTEKDLLCKHFEMTDQGEIHFILGMTIKRDRETKTLFISQQRYLESVLDRFGMANCKPISTPLETTYHKRTEEE-----EGFDKNLYQQAIGRLTYISTATRPDISAAVSILSSYMSNPSKEHWNGVKRLLRYIKGTLNFGLKFTTSENDDENGDELYGYSDANWAGDVDSRRSTSGYVFKVANSTVSWCSKKQASVTKSTTEAEYVALSQATQEAIWMRRLLSDI--GCKSEEPTTMYEDNQGAIEISKNARFHNRTKHIDVRFHFVREKVLSNEVKVIYCPTEHMLADIMTKGLT 519
BLAST of mRNA_H-paniculata_contig3921.10205.1 vs. uniprot
Match: A0A7D9HZ03_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HZ03_PARCT) HSP 1 Score: 319 bits (818), Expect = 2.310e-98 Identity = 186/511 (36.40%), Postives = 297/511 (58.12%), Query Frame = 1
Query: 1 EPKPAVEALKSPEADKWRAAMEEEWRALVENGTWESEDPGRLTVGRKAIRTKWVFKRKLKGDGSVARYEARLVTQGFSQVEGEGFFETSAPVARMSTLRTIFSMAVEHDFELEGMDVDAAYLNASVEEGLFVKLPPEFSPFSRDIPFVRC-LRKSLYRLKQSGRNRNNTLDDFLVGIGLQRSTTDLCFYFSRDEGGETDLLMVVYVDDLVIARRR-EKVDKFKHNISRRFKMKDLGSLSRVLRIEVRRDRPNGTISISQGGYIREVLRRYGIDECRVVPIPVDGKVKILAPESADKPSESKPLGAVLGMVGPLIYALTGTRSDIAYTVYQAARRMEDPCREDFSTRKRIFRYLSTVPDLGITFGGKSNNGHPE-----------DVDNRKSTTGYVFKLNGSAISWCSRNQ*LVTWSSTEAEYVGAGEARKETVYLRDLLGSICFGCRGSTTLFEDNKSAINLSKGSGAHCKTKHIGGRWHRIREWVREGILALKYVQTGNQLADILTKGL 1494
EP EAL P A++W AM++E +L E+ WE + L RKA+ KWVFK K DGS+ R++ARLV QGFSQ G + ET +PV R ++RT+ +++V+ +L MDV AA+LN +E+ +++K P F ++ + C L KSLY LKQS R N+ LD+ L IG ++ +D C Y ++G ++ ++VDD+++A + EK+ K K +I+ RF++KD+G L +L ++V ++ + + I Q Y ++++YG++ C+ V PVD K++ SA + SE VG L+Y + TR DI + V A+ +P E ++ KRIFRYL + G+ + S N +P+ D+++RKST+GY F++NG+A+SW S+ Q V S+ AEYV A +E +++R LL + T++EDN+SAI +SK H ++KHI +++ +R+ V + L + Y TG+ LAD+ TKG+
Sbjct: 145 EPTTVSEALCGPNAERWHEAMQQEMDSLQEHDVWELTE---LPKDRKAVGCKWVFKVKHNADGSIERHKARLVAQGFSQRFGVDYDETFSPVVRFESIRTVIALSVQRGLKLHQMDVTAAFLNGELEDEVYMKQPEGFEVKGKE--HLACKLNKSLYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKEEDGNI--FVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQE--DAKVWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLV---SAMEDSELFNKEEHQSAVGSLLYLSSATRPDITFAVNNVAKFSANPTNEHWTAVKRIFRYLKGTVNYGLLY---SENANPDCVGFSDADWAGDLNDRKSTSGYTFQINGAAVSWRSKKQTCVALSTAAAEYVALSAAAQEALWMRQLLTDLNVNIDEPMTIYEDNQSAIAMSKNPQFHGRSKHIDIKYYFVRDQVEKKTLTVLYCPTGSMLADLFTKGI 640
BLAST of mRNA_H-paniculata_contig3921.10205.1 vs. uniprot
Match: A0A4Y9ZVS1_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZVS1_9AGAM) HSP 1 Score: 313 bits (801), Expect = 4.350e-97 Identity = 190/511 (37.18%), Postives = 284/511 (55.58%), Query Frame = 1
Query: 1 EPKPAVEALKSPEADKWRAAMEEEWRALVENGTWE--SEDPGRLTVGRKAIRTKWVFKRKLKGDGSVARYEARLVTQGFSQVEGEGFFETSAPVARMSTLRTIFSMAVEHDFELEGMDVDAAYLNASVEEGLFVKLPPEFSPFSRDIPFVRCLRKSLYRLKQSGRNRNNTLDDFLVGIGLQRSTTDLCFYFSRDEGGETDLLMVVYVDDLVIARRR-EKVDKFKHNISRRFKMKDLGSLSRVLRIEVRRDRPNGTISISQGGYIREVLRRYGIDECRVVPIPVDGKVKILAPESADKPSESKPLGAVL--GMVGPLIYALTGTRSDIAYTVYQAARRMEDPCREDFSTRKRIFRYLSTVPDLGITFGGKSNNGHPE-------DVDNRKSTTGYVFKLNGSAISWCSRNQ*LVTWSSTEAEYVGAGEARKETVYLRDLLGSICFGCRGSTTLFEDNKSAINLSKGSGAHCKTKHIGGRWHRIREWVREGILALKYVQTGNQLADILTKGLS 1497
EP+ EA S E +W AA+E+E + + GTWE + PG VG + WVFK K G++A+Y+ARLV QGFSQ+ G + +T APVA++S++R + ++A D+EL MDV AYLN +EE +F+K PP F P V L K +Y LKQ+GR L + +G RS+ D +F GE ++ V VDDL IA +++ K + +F+M DLG + +L +E++RDR TIS+ Q YI +L R+ + + + + +D + +S P + + +L +G L+YA GTR D++Y V ++ M++P + KR+ RYL + +T+GG + NG D+R+S +GYVF ++G A+SW S+ Q +V SSTEAEYV A KE ++ R LG I TTL+ DN+SAI L+K + H +TKHI R+H IR+ V G + + Y T + AD+LTK L+
Sbjct: 29 EPRTVDEAKASGEWPQWEAAIEDELGRMKKMGTWELAEKPPGANVVG-----SWWVFKIKRDASGAIAKYKARLVAQGFSQIPGVDYTDTFAPVAKLSSIRILAALAARFDWELHQMDVKNAYLNGDLEEEIFMKQPPGF-PTPGQEQKVCHLFKPIYGLKQAGRRWYKKLCAAFLDMGFARSSVDHSVFFRHGPNGEI-AIVAVSVDDLAIAANSVDEMSHIKSALKLKFEMTDLGEIHWLLGLEIKRDRRGRTISMLQRAYIDTILSRFNLQDAKSLTTAIDPSFSLTTDQSPSTPQQYDDMRNILYREAIGSLMYAAIGTRPDVSYAVTALSQFMQNPGHPHWEAAKRVMRYLKGTKEEWLTYGGDNANGMEGFSDADWGSSDHRRSISGYVFLIDGGAVSWSSKKQPIVALSSTEAEYVAMTHAAKEVLWTRAFLGEIISPFDKPTTLYADNQSAITLAKDNLYHARTKHIAIRFHFIRDIVERGEVDIVYCPTADMAADVLTKPLT 532
BLAST of mRNA_H-paniculata_contig3921.10205.1 vs. uniprot
Match: A0A0C9RAA9_9HYME (POLX_4 protein (Fragment) n=1 Tax=Fopius arisanus TaxID=64838 RepID=A0A0C9RAA9_9HYME) HSP 1 Score: 318 bits (814), Expect = 7.250e-97 Identity = 192/504 (38.10%), Postives = 291/504 (57.74%), Query Frame = 1
Query: 19 EALKSPEADKWRAAMEEEWRALVENGTWESEDPGRLTVGRKAIRTKWVFKRKLKGDGSVARYEARLVTQGFSQVEGEGFFETSAPVARMSTLRTIFSMAVEHDFELEGMDVDAAYLNASVEEGLFVKLPPEFSPFSRDIPFVRC-LRKSLYRLKQSGRNRNNTLDDFLVGIGLQRSTTDLCFYFSRDEGGETDLLMVVYVDD-LVIARRREKVDKFKHNISRRFKMKDLGSLSRVLRIEVRRDRPNGTISISQGGYIREVLRRYGIDECRVVPIPVDGKVKI---LAPESADKPSESKPLGAVLGMVGPLIYALTGTRSDIAYTVYQAARRMEDPCREDFSTRKRIFRYLSTVPDLGITF--GGKSNNGHPE-----DVDNRKSTTGYVFKLNGSAISWCSRNQ*LVTWSSTEAEYVGAGEARKETVYLRDLLGSICFGCRGSTTLFEDNKSAINLSKGSGAHCKTKHIGGRWHRIREWVREGILALKYVQTGNQLADILTKGL 1494
EAL SPEAD W+ AM+EE + N TW +L G++AI TKWVFK K +G++ RY+ARLV +G SQ +G + ET +PV R ++LR +F+MA +HD + +D A+LN ++E +F+K P +S S + C L KSLY LKQ+ + N+ L++ L+ +GL RS D C YF E + + + +YVDD LV + ++ + K+ +S + KMKD+GS S VL + V+RD I + Q YI VL+R+G+D+C V P+D K+ + P+S ++ E + + + VG L+YA TR DI++ V +R ++P + + KR+ RYL + GI F +S G+ + D+D R+ST+GYVF + G+AISW S Q V SSTEAE A A +E ++L L + G ++ DNKSAI++ + + +TKH+ + IRE +R+ L L+Y+ T LAD LTK +
Sbjct: 238 EALNSPEADDWKRAMKEEIESHKTNRTWVLT---KLPEGKRAINTKWVFKTKRNAEGALVRYKARLVVKGCSQKQGVDYSETFSPVVRYNSLRFLFAMAAKHDLSVHQLDAVTAFLNGELQEEVFMKQPEGYSDNSGRV----CRLLKSLYGLKQASKVWNDKLNEVLISLGLIRSEVDQCIYFCVSE--YSMVYVAIYVDDVLVFSNDKKATQRIKNELSSKIKMKDMGSASSVLGMRVQRDEVKKLIKLDQSEYISSVLKRFGMDDCNAVATPLDLSQKLTLDMCPKSEEEKKEMEKV-PYMEAVGSLLYAAQNTRPDISFAVNLLSRFSQNPGKGHWLALKRVMRYLKGTVNKGIVFRKSAQSLTGYCDADWAGDLDQRRSTSGYVFIMQGAAISWSSHRQRTVALSSTEAELTSAVSAMQEAIWLHRLESELVHGGTEGIKMYCDNKSAIHIVRNNNFSPRTKHVDIKAKFIREKLRDKSLQLEYISTSEMLADGLTKAI 731
BLAST of mRNA_H-paniculata_contig3921.10205.1 vs. uniprot
Match: B8YLY6_MEDTR (Gag-Pol polyprotein n=4 Tax=Medicago truncatula TaxID=3880 RepID=B8YLY6_MEDTR) HSP 1 Score: 327 bits (838), Expect = 1.820e-96 Identity = 187/506 (36.96%), Postives = 295/506 (58.30%), Query Frame = 1
Query: 1 EPKPAVEALKSPEADKWRAAMEEEWRALVENGTWESEDPGRLTVGRKAIRTKWVFKRKLKGDGSVARYEARLVTQGFSQVEGEGFFETSAPVARMSTLRTIFSMAVEHDFELEGMDVDAAYLNASVEEGLFVKLPPEFSPFSRDIPFVRCLRKSLYRLKQSGRNRNNTLDDFLVGIGLQRSTTDLCFYFSRDEGGETDLLMVVYVDD-LVIARRREKVDKFKHNISRRFKMKDLGSLSRVLRIEVRRDRPNGTISISQGGYIREVLRRYGIDECRVVPIPVDGKVKILAPESADKPSESKPLGAV--LGMVGPLIYALTGTRSDIAYTVYQAARRMEDPCREDFSTRKRIFRYLSTVPDLGITFGGKS-------NNGHPEDVDNRKSTTGYVFKLNGSAISWCSRNQ*LVTWSSTEAEYVGAGEARKETVYLRDLLGSICFGCRGSTTLFEDNKSAINLSKGSGAHCKTKHIGGRWHRIREWVREGILALKYVQTGNQLADILTK 1488
EP EAL +A +W AM EE AL N TWE + L GRKAI KWV+K K G+ V RY ARLV +G++Q EG F E +PV R++T+R + +M D LE +DV A+L+ +EE +++ P F ++ R L KSLY LKQ+ R D F++ + R ++D C Y+ R +G + +++++YVDD LV+ +++V + K ++R F MKDLG +++L +++ RDR + I +SQ Y+R+VLRR+ + +C+ + P+ K+ + S +E + V VG L+YA+ TR DIA V +R M DP +E ++ KRI RY+ + + FGG ++ D D RKSTTGYVF L G A+SW S+ Q +V S+TEAEY+ A +A KE ++++ L+ + + T++ D++SA+++++ H +TKHIG ++H +RE V EG + ++ + T + LAD++TK
Sbjct: 787 EPSTFHEALNGSDASQWMTAMHEEMEALHRNKTWELVE---LPKGRKAIGNKWVYKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTIRVVLAMCAALDLHLEQLDVKTAFLHGELEEEIYMLQPEGFKEQGKENLVCR-LTKSLYGLKQAPRCWYKRFDSFIISLDYNRLSSDHCTYYKRFDGNDF-IILLLYVDDMLVVGPNKDRVQELKAQLAREFDMKDLGPANKILGMQIHRDRKDRKIWLSQKNYLRKVLRRFNMQDCKPISTPLPVNFKLSSGMSPSNEAERMEMSRVPYASAVGSLMYAMICTRPDIAQAVGVVSRFMADPGKEHWNAVKRIMRYIKGTSGVAVCFGGSELTVWGYVDSDFAGDHDKRKSTTGYVFTLAGGAVSWLSKLQTVVALSTTEAEYMAATQACKEAIWMQRLMEELGHK-QEQITVYCDSQSALHIARNPAFHSRTKHIGVQYHFVREVVEEGSVDMQKIHTNDNLADVMTK 1286
BLAST of mRNA_H-paniculata_contig3921.10205.1 vs. uniprot
Match: A0A7M6DPI8_9CNID (Uncharacterized protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M6DPI8_9CNID) HSP 1 Score: 326 bits (835), Expect = 4.370e-96 Identity = 189/512 (36.91%), Postives = 291/512 (56.84%), Query Frame = 1
Query: 1 EPKPAVEALKSPEADKWRAAMEEEWRALVENGTWESEDPGRLTVGRKAIRTKWVFKRKLKGDGSVARYEARLVTQGFSQVEGEGFFETSAPVARMSTLRTIFSMAVEHDFELEGMDVDAAYLNASVEEGLFVKLPPEFSPFSRDIPFVRC-LRKSLYRLKQSGRNRNNTLDDFLVGIGLQRSTTDLCFYFSRDEGGETD--LLMVVYVDDLVIARRREKV-DKFKHNISRRFKMKDLGSLSRVLRIEVRRDRPNGTISISQGGYIREVLRRYGIDECRVVPIPVDGKVKILAPESADKPSESKPLGAVLGMVGPLIYALTGTRSDIAYTVYQAARRMEDPCREDFSTRKRIFRYLSTVPDLGITFGGKSN-----NGHPE-----DVDNRKSTTGYVFKLNGSAISWCSRNQ*LVTWSSTEAEYVGAGEARKETVYLRDLLGSICFGCRGSTTLFEDNKSAINLSKGSGAHCKTKHIGGRWHRIREWVREGILALKYVQTGNQLADILTKGL 1494
EP EAL SP A+ W+ A++ E+ +L+EN TW+ + + + + +KWVFK K DG + R +ARLV QG+SQ G + + APVA+ +++R++ ++ E D EL MDV A+LN +EE +F+K P F +RD P + C L+KS+Y LKQS R N +D+FL G R+ D C Y + G+ L++ VYVDDL+IA ++ + K + RF+M+D + +L ++V+RDR N ++I Q ++ VL R+ ++EC+ V P++ +K E E L +G L YA GTR DI+ V ++ M P ++ + KR+ RYL D G+ + G + +G + D+D RKST+GYVFK+ S +SW S+ Q +V S TEAEYV +A +E ++LR L + F T +FEDN+ AI L+K H +TKHI ++H +R+ V + ++ L+Y T +AD+LTKGL
Sbjct: 775 EPTTIEEALSSPNAELWKDAIQNEYDSLIENETWKLVE---MPPDKNLVGSKWVFKHKRGADGKIQRCKARLVAQGYSQKSGIDYNDVFAPVAKYNSIRSVLAITNELDLELHQMDVKTAFLNGDLEEDIFMKQPEGF--INRDNPNMACKLQKSIYGLKQSARCWNEKMDEFLKESGFTRNDADPCIYHKQITKGDKSFTLIVAVYVDDLLIACNNIQILREQKQKLGERFEMEDKSEVHFILGMQVKRDRKNRRLTIDQNAFLSSVLNRFNMNECKPVATPLEPSMKF---EKLADDEEIVKLKDYQSAIGCLTYASIGTRPDISAAVGVLSQHMSKPGKQHWIGVKRVLRYLKGTLDYGLIYEGSESGDILLHGFADADWAGDIDTRKSTSGYVFKVGNSTVSWKSKRQSIVALSKTEAEYVALSQATQEVIWLRTLFKGMDFEQTDPTKMFEDNQGAIELAKNQPNHSRTKHIDIKFHHVRDAVAKKVIDLEYCPTDEMIADLLTKGL 1278
BLAST of mRNA_H-paniculata_contig3921.10205.1 vs. uniprot
Match: Q6BCY1_IPOBA (Gag-Pol n=1 Tax=Ipomoea batatas TaxID=4120 RepID=Q6BCY1_IPOBA) HSP 1 Score: 325 bits (834), Expect = 6.200e-96 Identity = 192/506 (37.94%), Postives = 298/506 (58.89%), Query Frame = 1
Query: 1 EPKPAVEALKSPEADKWRAAMEEEWRALVENGTWESEDPGRLTVGRKAIRTKWVFKRKLKGDGSVARYEARLVTQGFSQVEGEGFFETSAPVARMSTLRTIFSMAVEHDFELEGMDVDAAYLNASVEEGLFVKLPPEFSPFSRDIPFVRCLRKSLYRLKQSGRNRNNTLDDFLVGIGLQRSTTDLCFYFSRDEGGETDLLMVVYVDDLVIAR-RREKVDKFKHNISRRFKMKDLGSLSRVLRIEVRRDRPNGTISISQGGYIREVLRRYGIDECRVV--PIPVDGKVKILAPESADKPSESKPLGAVLGMVGPLIYALTGTRSDIAYTVYQAARRMEDPCREDFSTRKRIFRYLSTVPDLGITFGGKSN--NGHPE-----DVDNRKSTTGYVFKLNGSAISWCSRNQ*LVTWSSTEAEYVGAGEARKETVYLRDLLGSICFGCRGSTTLFEDNKSAINLSKGSGAHCKTKHIGGRWHRIREWVREGILALKYVQTGNQLADILTK 1488
EP EA+ S + +W AAM+EE AL +N TW+ L GRK I KWVFK K GD V RY ARLV +G++Q EG F E +PV R++T+R + +M + LE +DV A+L+ +EE +++ L PE + V L KSLY LKQ+ R D F++ +G R D C YF R G + +++++YVDD+++A ++ +D+ K ++R F+MKDLG +++L +++ RDR N I +SQ Y++++L R+ + +C+ + P+P++ KV S ++ VG L++A+ TR DIA V +R M +P RE ++ KRI RY+ D+ + +GG NG+ + D+D KSTTGYVFK+ G A+SW S+ Q +V S+TEAEYV A +A KE ++L+ LL + + +LF D++SA++L++ H +TKHI ++H IRE V+EG + L+ + T + +AD LTK
Sbjct: 780 EPSTFQEAINSSDVSQWTAAMQEEIEALHKNNTWDLVP---LPQGRKPIGNKWVFKIKRNGDDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTVRVVLAMCATFNLHLEQLDVKTAFLHGDLEEEIYM-LQPEGFEDKENQNLVCRLNKSLYGLKQAPRCWYKRFDSFIMCLGYNRLNADPCAYFKRF-GKDNFVILLLYVDDMLVAGPNKDHIDELKAQLAREFEMKDLGPANKILGMQIHRDRGNRKIWLSQKNYLKKILSRFSMQDCKSISTPLPINLKVSSSMSPSNEEGRMEMSRVPYASAVGSLMFAMICTRPDIAQAVGVVSRYMANPGREHWNCVKRILRYIKGTSDVALCYGGSDFIINGYVDSDYAGDLDKSKSTTGYVFKVAGGAVSWVSKLQAVVATSTTEAEYVAATQASKEAIWLKMLLEELGHK-QEFVSLFCDSQSALHLARNPAFHSRTKHIRVQYHFIREKVKEGTVDLQKIHTADNVADFLTK 1279
BLAST of mRNA_H-paniculata_contig3921.10205.1 vs. uniprot
Match: A0A6S7HEL0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 (Fragment) n=4 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HEL0_PARCT) HSP 1 Score: 325 bits (832), Expect = 9.230e-96 Identity = 190/511 (37.18%), Postives = 298/511 (58.32%), Query Frame = 1
Query: 1 EPKPAVEALKSPEADKWRAAMEEEWRALVENGTWESEDPGRLTVGRKAIRTKWVFKRKLKGDGSVARYEARLVTQGFSQVEGEGFFETSAPVARMSTLRTIFSMAVEHDFELEGMDVDAAYLNASVEEGLFVKLPPEFSPFSRDIPFVRCLRKSLYRLKQSGRNRNNTLDDFLVGIGLQRSTTDLCFYFSRDEGGETDLLMV-VYVDDLVIARRR-EKVDKFKHNISRRFKMKDLGSLSRVLRIEVRRDRPNGTISISQGGYIREVLRRYGIDECRVVPIPVDGKVKILAPESADKPSESKPLGAVLGMVGPLIYALTGTRSDIAYTVYQAARRMEDPCREDFSTRKRIFRYLSTVPDLGITFGGKSNNGHPE-----------DVDNRKSTTGYVFKLNGSAISWCSRNQ*LVTWSSTEAEYVGAGEARKETVYLRDLLGSICFGCRGSTTLFEDNKSAINLSKGSGAHCKTKHIGGRWHRIREWVREGILALKYVQTGNQLADILTKGL 1494
EP EAL P A++W AM++E +L E+ WE + L RKA+ KWVFK K DGS+ R++ARLV QGFSQ G + ET +PV R +RT+ +++V+ +L MDV AA+LN +E+ +++K P F ++ V L KSLY LKQS R N+ LD+ L IG ++ +D C Y ++G D+ +V ++VDD+++A + EK+ K K +I+ RF++KD+G L +L ++V ++ + + I Q Y ++++YG++ C+ V PVD K++ SA + SE VG L+Y + TR DI + V A+ +P E ++ KRIFRYL + G+ + S N +P+ D+++RKST+GY F++NG+A+SW S+ Q V S+ EAEYV A +E +++R LL + T++EDN+SAI +SK H ++KHI ++H +R+ V + L + Y TG+ LAD+ TKG+
Sbjct: 759 EPTTVSEALCGPNAERWHEAMQQEMDSLQEHDVWELTE---LPKDRKAVGCKWVFKVKHNADGSIERHKARLVAQGFSQRFGVDYDETFSPVVRFEKIRTVIALSVQRGLKLHQMDVTAAFLNGELEDEVYMKQPEGFEVKGKE-HLVCKLNKSLYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKEEDG---DIFVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQE--DAKVWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLV---SAIEDSELFNKEEYQSAVGSLLYLSSATRPDITFAVNNVAKFSANPTNEHWTAVKRIFRYLKGTVNYGLLY---SENANPDCVGFSDADWAGDLNDRKSTSGYTFQINGAAVSWRSKKQTCVALSTAEAEYVALSAAAQEALWMRQLLTDLNVNIDEPMTIYEDNQSAIAMSKNPQFHGRSKHIDIKYHFVRDQVEKKTLTVLYCPTGSMLADLFTKGI 1254
BLAST of mRNA_H-paniculata_contig3921.10205.1 vs. uniprot
Match: A0A2N9IUS6_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9IUS6_FAGSY) HSP 1 Score: 328 bits (840), Expect = 1.070e-95 Identity = 191/506 (37.75%), Postives = 297/506 (58.70%), Query Frame = 1
Query: 1 EPKPAVEALKSPEADKWRAAMEEEWRALVENGTWESEDPGRLTVGRKAIRTKWVFKRKLKGDGSVARYEARLVTQGFSQVEGEGFFETSAPVARMSTLRTIFSMAVEHDFELEGMDVDAAYLNASVEEGLFVKLPPEFSPFSRDIPFVRCLRKSLYRLKQSGRNRNNTLDDFLVGIGLQRSTTDLCFYFSRDEGGETDLLMVVYVDDLVIAR-RREKVDKFKHNISRRFKMKDLGSLSRVLRIEVRRDRPNGTISISQGGYIREVLRRYGIDECRVVPIPVDGKVKILAPESADKPSESKPLGAV--LGMVGPLIYALTGTRSDIAYTVYQAARRMEDPCREDFSTRKRIFRYLSTVPDLGITFGGKS-------NNGHPEDVDNRKSTTGYVFKLNGSAISWCSRNQ*LVTWSSTEAEYVGAGEARKETVYLRDLLGSICFGCRGSTTLFEDNKSAINLSKGSGAHCKTKHIGGRWHRIREWVREGILALKYVQTGNQLADILTK 1488
EP EA KS EA W AM+EE AL +N TW+ L GRKAI KWV+K K G+ V RY ARLV +GF+Q EG F E +PV R++T+R + +M D LE +DV A+L+ +EE +++ P F ++ V L KSLY LKQ+ R D F++ +G R ++D C Y+ R G +++++YVDD+++A ++++ K ++R F+MKDLG +++L +++ RDR N I +SQ Y++++LRR+ + +C+ +P P+ K+ + S +E + V VG L++A+ TR DIA V +R M +P +E +S KRI RY+ ++ + +GG ++ + D+D KST+GYVF L G A+SW S+ Q +V S+TEAEYV A +A KE ++L+ LL + + LF D++SA++L+K H KTKHI ++H +RE V EG + ++ + T + LAD+LTK
Sbjct: 1877 EPSTFHEATKSQEAPMWMVAMQEEIEALHKNKTWDLVP---LPQGRKAIGNKWVYKIKRDGNDQVERYRARLVVKGFAQKEGIDFNEIFSPVVRLTTVRVVLAMCATFDLYLEQLDVKTAFLHGELEEEIYMLQPEGFEEKGKE-NLVCKLNKSLYGLKQAPRCWYKRFDSFIMSLGYNRHSSDPCVYYKRFGDGNF-IILLLYVDDMLVAGPNKDRITDLKAQLAREFEMKDLGPANKILGMQIYRDRNNRKIWLSQKNYLKKILRRFNMQDCKPIPTPLPINFKLSSSMSPSNEAERMEMSRVPYASAVGSLMFAMVCTRPDIAQAVGVVSRYMVNPGKEHWSAVKRILRYVKGTSNVALCYGGSDFTVRGYVDSDYAGDLDKSKSTSGYVFTLAGGAVSWVSKLQSIVATSTTEAEYVAATQASKEAIWLQMLLEELGHK-QEKIALFCDSQSALHLAKNPAFHSKTKHIRVQYHFVREKVEEGSVDIQKIHTKDNLADMLTK 2376
BLAST of mRNA_H-paniculata_contig3921.10205.1 vs. uniprot
Match: A0A6S7JEY7_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JEY7_PARCT) HSP 1 Score: 310 bits (795), Expect = 4.030e-95 Identity = 190/509 (37.33%), Postives = 290/509 (56.97%), Query Frame = 1
Query: 1 EPKPAVEALKSPEADKWRAAMEEEWRALVENGTWESEDPGRLTVGRKAIRTKWVFKRKLKGDGSVARYEARLVTQGFSQVEGEGFFETSAPVARMSTLRTIFSMAVEHDFELEGMDVDAAYLNASVEEGLFVKLPPEFSPFSRDIPFVRCLRKSLYRLKQSGRNRNNTLDDFLVGIGLQRSTTDLCFYFSRDEGGETDLLMVVYVDDLVIARRRE-KVDKFKHNISRRFKMKDLGSLSRVLRIEVRRDRPNGTISISQGGYIREVLRRYGIDECRVVPIPVDGKVKILAPESADKPSESKPLGAVLGMVGPLIYALTGTRSDIAYTVYQAARRMEDPCREDFSTRKRIFRYLSTVPDLGITFGGKSNN----GHPE-----DVDNRKSTTGYVFKLNGSAISWCSRNQ*LVTWSSTEAEYVGAGEARKETVYLRDLLGSICFGCRGSTTLFEDNKSAINLSKGSGAHCKTKHIGGRWHRIREWVREGILALKYVQTGNQLADILTKGLS 1497
EP+ EAL SP+ KW AME+E +L N W + L RKA+ +KWVF+ K DG+V ++ARLV QGFSQ G+ + ET +PVAR ++RT+ ++A +H +L MDV A+LN ++E +++K P F ++ R LR+S+ LKQS R N+ LD L +G ++T D C Y ++EGGE ++ VYVDD+++A + + K+++ K ++ +F+MKD+G L ++V + + I I Q Y + VL R+G++ + PV+ K+ ++AD + VG L+Y T TR DIAY V AR P E + KRI RYL+ D+G+ + G G+ + D+D+RKST+GYVF+++ +AISW S+ Q V S+ EAEY+ A +E V+L+ LL + G + EDN++AI ++K + H + KHI ++H IRE V + L+Y T +ADI TKGLS
Sbjct: 129 EPRTVKEALSSPQKTKWVKAMEKEMESLKTNEVWNLVE---LPENRKAVGSKWVFRVKTDADGTVETHKARLVAQGFSQTFGDDYDETFSPVARFESVRTVIALAAQHGLKLHQMDVTTAFLNGDLKEEVYMKQPEGFIDKGKEHLVCR-LRRSICGLKQSPRCWNSVLDRKLKNMGFVQTTGDPCIYV-KEEGGEI-FIIAVYVDDILLAGKNDQKINEVKQALAEQFQMKDMGQRHYFLGVKVIQKPDSKEIWIGQEAYTKSVLERFGMESSKPASTPVNPGTKLK--KAADDSQRVDQVNYQCA-VGHLLYLSTKTRPDIAYAVSDVARFSAHPTEEHWIAVKRIMRYLNGTRDMGLLYDGSKTTTSCVGYSDADWAGDLDDRKSTSGYVFQISNAAISWRSKKQSCVALSTAEAEYMTLASATQEAVWLQQLLSDLKSKPTGPMLILEDNQAAICMAKNAQYHGRAKHIDIKYHFIREHVASAAVKLEYCSTEEMIADIFTKGLS 628 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3921.10205.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3921.10205.1 >prot_H-paniculata_contig3921.10205.1 ID=prot_H-paniculata_contig3921.10205.1|Name=mRNA_H-paniculata_contig3921.10205.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=379bp MEEEWRALVENGTWESEDPGRLTVGRKAIRTKWVFKRKLKGDGSVARYEAback to top mRNA from alignment at H-paniculata_contig3921:3537..5129- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3921.10205.1 ID=mRNA_H-paniculata_contig3921.10205.1|Name=mRNA_H-paniculata_contig3921.10205.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1593bp|location=Sequence derived from alignment at H-paniculata_contig3921:3537..5129- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3921:3537..5129- >mRNA_H-paniculata_contig3921.10205.1 ID=mRNA_H-paniculata_contig3921.10205.1|Name=mRNA_H-paniculata_contig3921.10205.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2274bp|location=Sequence derived from alignment at H-paniculata_contig3921:3537..5129- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |