mRNA_H-paniculata_contig3910.10183.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3910.10183.1 vs. uniprot
Match: D8LKX7_ECTSI (K+ transporter, Kef-type n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKX7_ECTSI) HSP 1 Score: 540 bits (1392), Expect = 5.040e-175 Identity = 367/863 (42.53%), Postives = 451/863 (52.26%), Query Frame = 1
Query: 475 LALWEGGKSPFPLSSTVLAMEAFVALCYTADILVNFCTFGVAQYRDKKWHFTFALLSACHLFLFGFALGTSRWHRHA--PCAHRRGDDSSSECG--------WWATPRLLLLGAQSLRPMMLISQLRTVRRVFMNVIRTMFRAGRILIMGAIVLMFYSVLGINLFNSEQVGGYKVDSDNFDTFGSALLSLFILTTEENFPMVADPSFSQRPLVAFPFFVSFLLVFXXXXXXXXLAVVLDAYGENHAAQRERNRRKARNALLAAYYVLDEDGALGLSEEQLVGVLTSEAGIGVGRVKAVQLWQILANEDPANTI------DTTNRRSHSAPPIRSIEALESWGEQRSSDLPANRSETLLPSGPRLSSQPRTMQEGKEGRLC---NDNYKNSDGMAAASSLFAMATVRHDTTASDEAATENARQVRPVRAARERARTPSRGGCAAYGARVDVHAFLRLADLLHQSFVVDDDHCSTGQDSSGGDTLGDGEGWGVRVDDGGEGGGIQRYATSNCRADHNEGYGNGSGKGVNASGAGSCGGDCDGRSQPANAVRRGSNGGTSRRSRSGRANRGRRCKKSFRRVVKRARCAAQRVVHVRWFICFAQSVTVLLAGISLIWTPVTQDRYNWCLRTQGKV-------SPVFCMDRTVLQWMEGALLLAFLAEMATKVLAFGWKQVYSAHWANRFDLLILAASLIAYIIAGIPGSTVALYLDRRSLLSDIFDLPRVVRVLRLLTVFPSLLKILETLSSVMGMLMRIMALYSCVSYSFATVGMAIFADATSDLLPSRYSFATLPEACLVLFFLTVTNNWNDLLYPLVNSVKAGRWTALYFVMYMLFCATMMFDVLVGVVIEGFRVSIRGPDDEQ 2985
LALWEGG SPFPL V A E F +LCY A I +N TFGV QYRDK+WHFTF +L+A HL L A S+ R + P G WW R LLGAQ+LRPMMLIS L+T+RRVF NV+RT R G IL++GA+VL FYSVLGINLFNS+QV GY D DNF+ FGS+LLSLF+L TEENFPMVADPSF+QRPLVAFPFFVSFLL+ XXXXXXXX RRKARNALLAAY+VLD DG GLS +QLVGVLT EAG+G+ R + + + + T D +H E G E L G QE + ++C D NSD T N+ ER R S G C+ G V RL L H R+ ++AR AA+ +V WF ++ + VLLA +++ WTP +Q RY+ C +G+ S V + + + +EG +LLAF EMA KVLA G +++ HWA+RFDL+ILA L +Y+ G+PG+ ALY+D LLSD+ +LP + VLRL+TVFP L K+LET+S+V GMLM+IM LYSCVSY+FAT+GMAIF++A SDLL RYSF+TLPEA + LFFLTV+NNWNDLLYPLV+S GRW+A+YFV YMLFCATMM DVL GVVIEGFRVS +GP+ Q
Sbjct: 3 LALWEGGMSPFPLHPAVAATEVFFSLCYAAHIFLNLWTFGVKQYRDKRWHFTFTVLAAAHLVLMCLAFLASKRSRTSVEPXXXXXXXXXXXAAGGLYEDGEDWWNCSRFALLGAQALRPMMLISNLKTIRRVFTNVLRTAKRTGSILVLGAVVLAFYSVLGINLFNSKQVKGYTDDGDNFNNFGSSLLSLFVLVTEENFPMVADPSFTQRPLVAFPFFVSFLLLVXXXXXXXXXXXXXXXXXXXXXXXXXXXRRKARNALLAAYFVLDGDGVEGLSRDQLVGVLTVEAGVGIDREQVAESGEGGDGAEGGRTCFIAGYGDELFGSAHGGQRWDGGEGTHGAGSLGDGKYSFREDEEDLEGG--------GGQEQERQKVCWCPRDKRGNSDS------------------------TNNS----------ERRRADSEG-CSGDGDSVAFCPQRRLKRLAH-------------------------------------------------------------------------------------------------------------------RMEEQARAAARDMVGREWFSLMSKGIGVLLAMLAVTWTPRSQLRYDKCPLGEGEEVCNKPHESEVAFLREDLFRRLEGLVLLAFSFEMAAKVLAVGGRRLLRLHWAHRFDLIILATCLASYLFVGMPGNRRALYVDHHPLLSDVIELPMALAVLRLVTVFPQLRKLLETMSTVAGMLMKIMVLYSCVSYTFATLGMAIFSNARSDLLEPRYSFSTLPEAAMTLFFLTVSNNWNDLLYPLVDSNPLGRWSAIYFVAYMLFCATMMLDVLTGVVIEGFRVSTKGPEQAQ 707
BLAST of mRNA_H-paniculata_contig3910.10183.1 vs. uniprot
Match: A0A7S1CFS5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CFS5_9STRA) HSP 1 Score: 122 bits (307), Expect = 1.110e-25 Identity = 78/224 (34.82%), Postives = 128/224 (57.14%), Query Frame = 1
Query: 2338 VLQWMEGALLLAFLAEMATKVLAFGWKQVYSAHWANRFDLLILAASLIAYIIA-GIPGSTVALYLDRRSLLSDIFDLPRVVRVLRLLTVFPSLLKILETLSSVMGMLMRIMALYSCVSYSFATVGMAIFAD-ATSDLLPSRYSFATLPEACLVLFFLTVTNNWNDLLYPLVNSVKAGRWTALYFVMYMLFCATMMFDVLVGVVIEGFRVSIRGPDDEQHQAMAG 3003
V+ + G ++A AE++ ++ A G+ + +++ WA R D++ +A SL I++ PG+T+ D L D L R +R +R+L+VF + T++ + + MR+ LY V+Y+FA VGM F D D R+ F T A L L L+VTNNW D++YP++ AGRW ALYFV Y + C ++ ++L G+VIE + S + ++++H AG
Sbjct: 190 VVHVIAGIAIMAQAAELSVRIAANGFPRFWASAWA-RVDVVAVAVSLAVCILSLCAPGATLTQLPDAG--LQDAIGLLRSLRYVRVLSVFERFRAFVATVADGVAVAMRLFVLYFSVTYAFAVVGMEWFGDLGQHDDGEQRWGFETFGAAMLALTQLSVTNNWQDVMYPVLRDSAAGRWAALYFVAYFVLCVILLLNILSGIVIEAYSNSKQRLEEQEHNVDAG 410
BLAST of mRNA_H-paniculata_contig3910.10183.1 vs. uniprot
Match: A0A7S2V4Z8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4Z8_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 1.230e-19 Identity = 47/111 (42.34%), Postives = 72/111 (64.86%), Query Frame = 1
Query: 847 NVIRTMFRAGRILIMGAIVLMFYSVLGINLFNSEQVGGYKVDSDNFDTFGSALLSLFILTTEENFPMVADPSFSQRPLVAFPFFVSFLLVFXXXXXXXXLAVVLDAYGENH 1179
++ T+ G I+ + + L F+ VLG LFNS+Q GY+ +DN+D+F ++LL++++LTT ENFP VA+P+FSQR A FF+ FL++F LA V+D Y N+
Sbjct: 3 TIMATIIGLGPIIALALVGLTFFGVLGAGLFNSQQCPGYEEGNDNYDSFHASLLAMYVLTTTENFPEVAEPAFSQRFWPATMFFIGFLILFTLLLMPLLLATVMDLYKNNY 113
BLAST of mRNA_H-paniculata_contig3910.10183.1 vs. uniprot
Match: A0A7S1C3P4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C3P4_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 2.360e-18 Identity = 86/298 (28.86%), Postives = 131/298 (43.96%), Query Frame = 1
Query: 406 LGNSLAHPLYRNFMICVILGHHTLALWEGGKSPFPLSST---------VLAMEAFVALCYTADILVNFCTFGVAQYRDKKWHFTFALLSACHLFL----FGFALGTSRWHRHAPCAHRRGDDSSSECGWWATPRLLLLGAQSLRPMMLISQLRTVRRVFMNVIRTMFRAGRILIMGAIVLMFYSVLGINLFNSEQVGGYKVDSDNFDTFGSALLSLFILTTEENFPMVADPSFSQRPLVAFPFFVSFLLVFXXXXXXXXLAVVLDAYGENHAAQRERNRRKARNALLAAYYVLDEDGA 1260
L + L HP YR + V++ + +WE S +S+ V + + L D + + R W FA++ AC LFL F AL + R + + LRP++ I+++R+VR + IR + + + ++ +V + + + LF++ QV GY+ D+DNFD FGS+LLSLFIL+T EN+P + P+ RPL+ FF +FLL A V D Y H A R K AL AA+ VL A
Sbjct: 5 LRHRLQHPAYRVAITSVLIAFLLIIVWEPQSSRDVISNGFWFYSHKPGVATVHGLLLLALCVDAGLTAAAYR-KHVRRMGW---FAIVCAC-LFLCVVDFCMALSAVQAFRFS---------------------------RVLRPLLFIAKIRSVRELLRTSIRALGQMLDVCVLTLLVFVAAADVASELFSTLQVTGYRADADNFDAFGSSLLSLFILSTTENYPSIFYPALDLRPLLGSLFFGAFLLWTQWLNLPIVTANVFDLYVAEHKAHTLRRHSKRAKALSAAFAVLSRASA 270
BLAST of mRNA_H-paniculata_contig3910.10183.1 vs. uniprot
Match: A0A5A8EAV9_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EAV9_CAFRO) HSP 1 Score: 100 bits (248), Expect = 1.280e-17 Identity = 57/151 (37.75%), Postives = 89/151 (58.94%), Query Frame = 1
Query: 784 AQSLRPMMLISQLRTVRRVFMNVIRTMFRAGRILIMGAIVLMFYSVLGINLFNSEQVGGYKVDSDNFDTFGSALLSLFILTTEENFPMVADPSFSQRPLVAFPFFVSFLLVFXXXXXXXXLAVVLDAYGENHAAQRERNRRKARNALLAAY 1236
++ LRP++LI++ +RR + RT GRI + A++L+FY+VLG +F+ EQV GY +++DNF +F ++ L++F+L + ENFP V P+ +RP+VA FF+S L F LAV + Y R K+ +LAAY
Sbjct: 187 SRPLRPLLLIAKSPDLRRSLAVIARTFAAIGRITSLFALLLLFYAVLGCQVFSPEQVSGYSLENDNFGSFSASALTMFVLQSTENFPDVMYPALDERPVVAVLFFISGLYAFAWVITPLLLAVQYEHYQSVMETAARAQRAKSYVPMLAAY 337
BLAST of mRNA_H-paniculata_contig3910.10183.1 vs. uniprot
Match: A0A5A8D2K3_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D2K3_CAFRO) HSP 1 Score: 99.8 bits (247), Expect = 2.140e-17 Identity = 56/151 (37.09%), Postives = 89/151 (58.94%), Query Frame = 1
Query: 784 AQSLRPMMLISQLRTVRRVFMNVIRTMFRAGRILIMGAIVLMFYSVLGINLFNSEQVGGYKVDSDNFDTFGSALLSLFILTTEENFPMVADPSFSQRPLVAFPFFVSFLLVFXXXXXXXXLAVVLDAYGENHAAQRERNRRKARNALLAAY 1236
++ LRP++L+++ +RR + RT GRI + A++L+FY+VLG +F+ EQV GY +++DNF +F ++ L++F+L + ENFP V P+ +RP+VA FF+S L F LAV + Y R K+ +LAAY
Sbjct: 957 SRPLRPLLLVAKSPDLRRSLAVIARTFAAIGRITSLFALLLLFYAVLGCQVFSPEQVSGYSLENDNFGSFSASALTMFVLQSTENFPDVMYPALDERPVVAVLFFISGLYAFAWVITPLLLAVQYEHYQSVMETAARAQRAKSYVPMLAAY 1107
BLAST of mRNA_H-paniculata_contig3910.10183.1 vs. uniprot
Match: A0A0L0DIW3_THETB (Uncharacterized protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DIW3_THETB) HSP 1 Score: 75.5 bits (184), Expect = 4.260e-10 Identity = 55/177 (31.07%), Postives = 100/177 (56.50%), Query Frame = 1
Query: 784 AQSLRPMMLISQLRTVRRVFMNVIRTMFRAGRILIMGAIVLMFYSVLGINLFNSEQVGGYKVD---SDNFDTFGSALLSLFILTTEENFPMVADPSFSQRPLVAFPFFVSFLLVFXXXXXXXXLAVVLDAYGENHAAQRERNRRKARNALLAAYYVLDED--GALGLSE-EQLVGVL 1296
+++ RP++LI+Q R +R+ F ++++M + ++ ++ Y+ LG+ LF + Y+ D + +F+T+ +A+LSLF L T EN+PM+ P+F + +F+SF+ V LAVV DAY E H + + K + L+ A++ +D D G + +SE E L+ V+
Sbjct: 260 SRAARPLLLIAQSRRLRQTFSLIVKSMPAVLGVGLIFFVITACYAHLGVMLFQGQY--SYREDEIPAGDFNTWSAAMLSLFFLITTENYPMIMYPAFDVSQYAS-AYFMSFICV-HFVLMALLLAVVFDAYSEEHRSHIVSSLVKEKRNLMLAFHCIDRDNSGFVDVSEWEDLLRVI 432
BLAST of mRNA_H-paniculata_contig3910.10183.1 vs. uniprot
Match: A0A420F7E9_9ACTN (Ion transporter n=1 Tax=Micromonospora globbae TaxID=1894969 RepID=A0A420F7E9_9ACTN) HSP 1 Score: 63.9 bits (154), Expect = 4.600e-7 Identity = 59/211 (27.96%), Postives = 96/211 (45.50%), Query Frame = 1
Query: 2338 VLQWMEGALLLAFLAEMATKVLAFGWK-QVYSAHWANRFDLLILAASLIAYIIAGIPGSTVALYLDRRSLLSDIFDLPRVVRVLRLLTVFPSLLKILETLSSVMGMLMRIMALYSCVSYSFATVGMAIFADATSDLLPSRYSFATLPEACLVLFFLTVTNNWNDLLYPLVNSVKAGRWTALYFVMYMLFCATMMFDVLVGVVIEGFRVSIR 2967
VL+W+E A +AF+ E+A ++LA+G + Q + H N FD L+ +A + G+ G L + RV RVLRL+ P L I+ L + + +AL Y + VG IFAD P +Y + + L LF L DL+ + WT LY+V Y++ ++ ++L+ V++ + R
Sbjct: 65 VLRWLELAFRVAFVTEIAIRLLAYGRRPQDFFRHGWNIFDFLVT----LAIFVPGLHGDPALL------------RVLRVARVLRLVRFSPGLRTIVAALLRSLPGVAGFLALAVVTLYVYGMVGWLIFADT----YPEQYG--DIGRSLLTLFVLLSLETLPDLIE---QGMAVSPWTLLYYVSYVVITVNLLLNILIAVIVNSMEEARR 250
BLAST of mRNA_H-paniculata_contig3910.10183.1 vs. uniprot
Match: A0A0H5R644_9EUKA (EF-hand domain-containing protein n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5R644_9EUKA) HSP 1 Score: 63.5 bits (153), Expect = 1.830e-6 Identity = 70/292 (23.97%), Postives = 133/292 (45.55%), Query Frame = 1
Query: 2209 FAQSVTVLLAGISLIWTPVTQ--DRYNWCLRTQGKVSPVFCMDRTVLQWMEGALLLAFLAEMATKVLAFGWKQVYSAHWANRFDL-LILAASLIAYIIAGIPGSTVALYLDRRSLLSDIF--------------DLPRVVRVLRLLTVFPSLLKILETLSSVMGMLMRIMALYSCVSYSFATVGMAIFADATSDLLPSRYS-----FATLPEACLVLFFLTVTNNWNDLLYPLVNSVKAGRWTALYFVMYMLFCATMMFDVLVGVVIEGFRVSIRGPDDEQHQAMAGYVMFQ 3018
F + +L I+ +W V + NW R +V ++ T L++ L +A + +L G H +N F L L+L+ ++I G G+ + DRR L +F + R +RVLR+L ++ S +L+TL S ++ ++ + + V + FAT+G+ +F++A P +S F + ACL LF L+ +NNW + LYP + + W++L+F+ + T++ +V +I + + ++ G+ +F+
Sbjct: 368 FMALIEILRYQITQVWDCVESGDELANW--REVLRVGCRRALNITSLKYFRTTCLGISVANLIALLLLSGQPYSLLMHISNWFFLSLMLSENVIIIAARGCKGA----WEDRRLDLMLVFLSVPAEIALWGPYLTVSRSLRVLRILPIWGSSRPLLQTLRSSSAIVWHLLFILAAVFFFFATIGLELFSEARIGH-PHLFSTGDENFDSFLGACLALFQLSTSNNWQNNLYPAI--LDTSIWSSLFFIAFYFLVNTVIVNVFAANLISAYTLR---ESEKTELVKCGHSLFK 647
BLAST of mRNA_H-paniculata_contig3910.10183.1 vs. uniprot
Match: UPI0007DB6C63 (voltage-dependent T-type calcium channel subunit alpha-1G n=1 Tax=Anolis carolinensis TaxID=28377 RepID=UPI0007DB6C63) HSP 1 Score: 63.5 bits (153), Expect = 2.580e-6 Identity = 56/199 (28.14%), Postives = 94/199 (47.24%), Query Frame = 1
Query: 2374 FLAEMATKVLAFGWKQVYSAHWANRFDLLILAASLIAYIIAGIPGSTVALYLDRRSLLSDIFDLPRVVRVLRLLTVFPSLLKILETLSSVMGMLMRIMALYSCVSYSFATVGMAIF-----ADATSDLLPSRYSFATLPEACLVLFFLTVTNNWNDLLYPLVNSVKAGRWTALYFVMYMLFCATMMFDVLVGVVIEGFR 2955
F EM K+L +G Y + N FD +I+ S+ + I G G ++ + R++RVL+L+ P+L + L L M + L + F+ +GM +F ++ D LP R +F +L A + +F + +WN +LY W ALYF+ M F ++F++LV +++EGFR
Sbjct: 720 FALEMLLKLLVYG-PFGYIKNPYNIFDGIIVVISV--WEIVGQQGGGLS-----------VLRTFRLMRVLKLVRFMPALQRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHLFGCKFASERDGDTLPDRKNFDSLLWAIVTVFQILTQEDWNKVLYN--GMASTSSWAALYFIALMTFGNYVLFNLLVAILVEGFR 902 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3910.10183.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3910.10183.1 >prot_H-paniculata_contig3910.10183.1 ID=prot_H-paniculata_contig3910.10183.1|Name=mRNA_H-paniculata_contig3910.10183.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1020bp MDHFASICSCAVCHNVLLCLDELEYPELGGGKDMAATSEKTRLVAQCLSRback to top mRNA from alignment at H-paniculata_contig3910:2614..16786+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3910.10183.1 ID=mRNA_H-paniculata_contig3910.10183.1|Name=mRNA_H-paniculata_contig3910.10183.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=14173bp|location=Sequence derived from alignment at H-paniculata_contig3910:2614..16786+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3910:2614..16786+ >mRNA_H-paniculata_contig3910.10183.1 ID=mRNA_H-paniculata_contig3910.10183.1|Name=mRNA_H-paniculata_contig3910.10183.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=6120bp|location=Sequence derived from alignment at H-paniculata_contig3910:2614..16786+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |