mRNA_H-paniculata_contig389.10149.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig389.10149.1 vs. uniprot
Match: A0A6H5JS97_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS97_9PHAE) HSP 1 Score: 200 bits (508), Expect = 6.160e-50 Identity = 130/375 (34.67%), Postives = 186/375 (49.60%), Query Frame = 3
Query: 3690 LPSMLRHTVNPVKTQGAVDAVRSGQMTFHQAAPVFGVSKSSIKPRVKGHMTIDGQVRQPTVLAKEKEDEIEGKLLWATHRHLGVGRVGLMGSVRVDCNDDRKVPWDREKGPGRSILREAPSSAGATQPRLRSEQDHG*RRTSPESILHQLGENVDQPTVGGGPCVEYRRNRCHSPRFQGEEDNCSKGAEGGRHEALNYPENMAAVATVARPGPSCHPQSSSKGNGCKPRGSVSVTTGFRAQRTSRPTRLTCRERMIFVNFLKKFDRQLGAGGFKDGKPRILVPDSHVSHVNLQVVEWAISMNVELFQLPSHFSHMT*PLDVAAFGTFKKAVTSVLKPFRQQHGGRMPVKADMVELIE*SWVGNFTVPQIKVSFQG 4814
L SM R V+PV + A +AVRSG+M+ + AA FG+ +SS++ R+ G+ +D +V TV+ K +ED ++ LL+A + + L V CND R +PW+ +KGPG+ L+ RL + +S + LH+ + P ++ N S G C GA GG +A ++ EN V T+ G P KG V A T + C + +F+ ++ F QL DGKP +LV D H SHV+L+VVE A S+N+ L QLPSH SH+T PLDVA FG FKK +T ++ F HGG +P K DM +I +W +FT K SF G
Sbjct: 12 LLSMGRQRVDPVAAEKACEAVRSGRMSQNAAAAAFGLGRSSLQRRLDGNCAMDARVGPGTVMTKAEEDAVKYLLLYAGRNFIPLTTADLTERVSRLCNDGRPIPWNSDKGPGKDWLKGFLGRHEGISHRLARIYESNRVTSSEDERLHKFYGFWAEFLGEHRPAADHIWNTDES----GTAGLCGTGAAGGPADAFHFAENCTIVTTINAAGAVLAPTIIFKGQRFNEDWIVDQDGPPGATYTCTESSFMCGD--VFIKYIMDFHEQLRKRNLLDGKPHVLVLDGHASHVSLEVVELARSLNIHLVQLPSHMSHITQPLDVAGFGCFKKELTKAIQAFPATHGGALPRKRDMASVIGQAWSTSFTPDINKASFAG 380
BLAST of mRNA_H-paniculata_contig389.10149.1 vs. uniprot
Match: A0A6H5L5E2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5E2_9PHAE) HSP 1 Score: 192 bits (488), Expect = 2.970e-49 Identity = 123/386 (31.87%), Postives = 191/386 (49.48%), Query Frame = 3
Query: 3699 MLRHTVNPVKTQGAVDAVRSGQMTFHQAAPVFGVSKSSIKPRVKGHMTIDGQVRQPTVLAKEKEDEIEGKLLWATHRHLGVGRVGLMGSVRVDCNDDRKVPWDREKGPGRSIL----REAPSSAGATQPRLRSEQDHG*RRTSPESILHQLGENVDQPTVGGGPCVEYRRNRCHSPRFQGEEDNCSKGAEGGRHEALNYPENMAAVATVARPGPSCHPQSSSKGNGCK----------PRGSVSVTTGFRAQRTSRPTRLTCRERMIFVNFLKKFDRQLGAGGFKDGKPRILVPDSHVSHVNLQVVEWAISMNVELFQLPSHFSHMT*PLDVAAFGTFKKAVTSVLKPFRQQHGGRMPVKADMVELIE*SWVGNFTVPQIKVSFQG 4814
M+R V+P + Q A++AVRSG M+ AA +GV+K S+ R+ G ++D +V TVL E+E +E LL+A +G+ R L VR CND R +PWD GPGRS L + P+ + + + + T ++ GE VD+ + S + + G + G N EN+ V T++ G + P KG + P ++V Q T +FVN+++ F RQL G +G P +LV D H SHV +VV+ A +N+ L+Q+PSH SH+ PLDV +FG+FK+ +T VL F ++GGR+P K+DM+ ++ +W+ +F+ + SF G
Sbjct: 1 MVRSKVDPEQAQKAIEAVRSGAMSLRAAAQAYGVNKRSLSRRLTGDESMDAKVGPRTVLTVEEESFVEDALLYAARHFIGIDRTALQEHVRQLCNDGRDIPWDAAVGPGRSWLDGFFKRHPALSERSARIYEANRIMSDDETRLQTFYKDFGEFVDKEKIPADHLWNTDETGSTSQGTKTMKVITESGQKVGGAMRSNSRENVTVVVTISAAGATLAPWIIYKGQRLQADWVKGRNGPPNARLAVIDSSFMQGT------------VFVNYIRDFHRQLLDRGLINGTPHVLVLDGHASHVTYEVVKLARDLNIVLYQIPSHSSHVVQPLDVGSFGSFKREITKVLSAFPARNGGRVPAKSDMLGILGDAWLRSFSEERNTSSFAG 374
BLAST of mRNA_H-paniculata_contig389.10149.1 vs. uniprot
Match: B2KWI5_ECTSI (Transposase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=B2KWI5_ECTSI) HSP 1 Score: 193 bits (490), Expect = 2.200e-47 Identity = 123/386 (31.87%), Postives = 192/386 (49.74%), Query Frame = 3
Query: 3699 MLRHTVNPVKTQGAVDAVRSGQMTFHQAAPVFGVSKSSIKPRVKGHMTIDGQVRQPTVLAKEKEDEIEGKLLWATHRHLGVGRVGLMGSVRVDCNDDRKVPWDREKGPGRSIL----REAPSSAGATQPRLRSEQDHG*RRTSPESILHQLGENVDQPTVGGGPCVEYRRNRCHSPRFQGEEDNCSKGAEGGRHEALNYPENMAAVATVARPGPSCHPQSSSKGNGCK----------PRGSVSVTTGFRAQRTSRPTRLTCRERMIFVNFLKKFDRQLGAGGFKDGKPRILVPDSHVSHVNLQVVEWAISMNVELFQLPSHFSHMT*PLDVAAFGTFKKAVTSVLKPFRQQHGGRMPVKADMVELIE*SWVGNFTVPQIKVSFQG 4814
M+R V+P + Q A++AVRSG M+ AA +GV+K S+ R+ G ++ID +V TVL E+E+ +E LL+A +G+ R L VR CND R +PWD GPGRS L + P+ + + + + T ++ GE VD+ + S + + G + N E + V T++ G + P KG + P ++VT Q T +FVN+++ F RQL G +G P +LV D H SHV +V++ A +N+ L+Q+PSH SH+ PLDV +FG+FK+ +T VL F ++GGR+P K+DM+ ++ +W+ +F+ Q SF G
Sbjct: 1 MVRSKVDPEQAQKAIEAVRSGAMSLRAAAQAYGVNKRSLSRRLSGDVSIDAKVGPRTVLTVEEENFVEDALLYAARHFIGIDRTALQEHVRQLCNDGRDIPWDAAVGPGRSWLDGFFKRHPALSERSARIYEANRIMSDDETRLQTFYKDFGEFVDKEKIPADHLWNTDETGSTSQGTKTMKAIAESGQKVVGAMRSNSRETVTVVVTISAAGATLAPWIIYKGQRLQADWVKGRNGPPNARLAVTDSSFMQGT------------VFVNYIRDFHRQLLDRGLINGTPHVLVLDGHASHVTYEVIKLARDLNIVLYQIPSHSSHVVQPLDVGSFGSFKREITKVLSAFPARNGGRVPAKSDMLGILGDAWLRSFSEQQNISSFAG 374
BLAST of mRNA_H-paniculata_contig389.10149.1 vs. uniprot
Match: A0A6H5JK80_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK80_9PHAE) HSP 1 Score: 191 bits (486), Expect = 2.840e-47 Identity = 130/394 (32.99%), Postives = 197/394 (50.00%), Query Frame = 3
Query: 3699 MLRHTVNPVKTQGAVDAVRSGQMTFHQAAPVFGVSKSSIKPRVKGHMTIDGQVRQPTVLAKEKEDEIEGKLLWATHRHLGVGRVGLMGSVRVDCNDDRKVPWDREKGPGRSIL----REAPSSAGATQPRLRSEQDHG*RRTSPESILHQLGENVDQ---PTVGGGPCVEYRRNRCHSPRFQGEEDNCSKG-AEGGRHEA----LNYPENMAAVATVARPGPSCHPQSSSKGNGCK----------PRGSVSVTTGFRAQRTSRPTRLTCRERMIFVNFLKKFDRQLGAGGFKDGKPRILVPDSHVSHVNLQVVEWAISMNVELFQLPSHFSHMT*PLDVAAFGTFKKAVTSVLKPFRQQHGGRMPVKADMVELIE*SWVGNFTVPQIKVSFQG 4814
M+R V+P + Q A++AVRSG M+ AA +GV+K S+ R+ G +++D +V TVL E+E+ +E LL+A +G+ R L VR CND R + WD GPGRS L + P+ + + + + T ++ GE VD+ PT G EY P + K AE G+ N +N+ V T++ G + P KG + P ++VT Q T +FVN+++ F RQL G +G P +LV D H SHV +VV+ A +N+ L+Q+PSH SH+ PLDV +FG+FK +T VL F ++GGR+P K+DM+ ++ +W+ +F+ Q SF G
Sbjct: 1 MVRSKVDPEQAQKAIEAVRSGAMSLRAAAQAYGVNKRSLSRRLSGDVSMDAKVGPRTVLTVEEENFVEDALLYAARHFIGIDRTALQEHVRQLCNDGRDISWDAAVGPGRSWLDGFFKRHPALSERSARIYEANRIMSDDETCLQTFYKDFGEFVDKENIPTCGTQMRQEYTDLERAVPGSTPQGTKTMKVIAESGQKVVGAMRSNSRDNVTVVVTISAAGATLAPWIIYKGQRMQADWVKGRNGPPNARLAVTDSSFMQGT------------VFVNYIRDFHRQLLDRGLINGTPHVLVLDGHASHVTYEVVKLARDLNIVLYQIPSHSSHVVQPLDVGSFGSFKWEITKVLSAFPARNGGRVPAKSDMLGILGDAWLRSFSEEQNISSFAG 382
BLAST of mRNA_H-paniculata_contig389.10149.1 vs. uniprot
Match: A0A6H5JYX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYX7_9PHAE) HSP 1 Score: 184 bits (468), Expect = 5.070e-46 Identity = 127/379 (33.51%), Postives = 178/379 (46.97%), Query Frame = 3
Query: 3690 LPSMLRHTVNPVKTQGAVDAVRSGQMTFHQAAPVFGVSKSSIKPRVKGHMTIDGQVRQPTVLAKEKEDEIEGKLLWATHRHLGVGRVGLMGSVRVDCNDDRKVPWDREKGPGRSILREAPSSAGATQPRLRSEQDHG*RRTSPESILHQLGENVDQPTVGGGPCVEYRRNRCHS----PRFQGEEDNCSKGAEGGRHEALNYPENMAAVATVARPGPSCHPQSSSKGNGCKPRGSVSVTTGFRAQRTSRPTRLTCRERMIFVNFLKKFDRQLGAGGFKDGKPRILVPDSHVSHVNLQVVEWAISMNVELFQLPSHFSHMT*PLDVAAFGTFKKAVTSVLKPFRQQHGGRMPVKADMVELIE*SWVGNFTVPQIKVSFQG 4814
L SM R+ V A +AVRSG M+ + AA +G+SK+S+ R+ G ID +V TV+ +ED +E LL+A + + L VR CND R +PW +KGPGRS L RL + ++ + LH+ + Q P ++ N S QG+ +G EN V T+ G P KG + A + C E +F+ ++K F +QLG DGKP +LV D H SHV L V++ AIS+N+ L QLPSH SH+T PLDVA FG FKK + V++ F ++GG +P K DM +I +W +FT K SF G
Sbjct: 12 LLSMGRNRVCAEAATKACEAVRSGSMSGNAAAAAYGISKTSLSRRLSGECAIDARVGPGTVMTAAEEDALEDVLLYAGRNFIPLTTADLTERVRQLCNDGRPIPWTPDKGPGRSWLEGFLGRHERISLRLARIYESNRVTSAEDERLHKFYDFWGQFIDEHQPAADHVWNTDESGGTVQGTQGQRVMAERGQPVVAQMRSTSRENCTIVTTINAAGAVLAPTIIFKGQRFNGDWVADLNGPPGAYYDCTESSFMCGE--VFIKYIKNFHKQLGDRNLLDGKPHVLVLDGHASHVTLDVIKLAISLNIHLVQLPSHMSHITQPLDVAGFGCFKKELAKVIQAFPARNGGALPRKRDMAGMIGLAWGSSFTPEINKASFAG 388
BLAST of mRNA_H-paniculata_contig389.10149.1 vs. uniprot
Match: A0A6H5JRA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRA3_9PHAE) HSP 1 Score: 182 bits (461), Expect = 1.210e-45 Identity = 138/400 (34.50%), Postives = 196/400 (49.00%), Query Frame = 3
Query: 3699 MLRHTVNPVKTQGAVDAVRSGQMTFHQAAPVFGVSKSSIKPRVKGHMTIDGQVRQPTVLAKEKEDEIEGKLLWATHRHLGVGRVGLMGSVRVDCNDDRKVPWDREKGPG--------RSILREAPSSAGATQPRLRSEQDHG*RRTSPESILHQLGENVDQPTVGGGPCVEYRRNRCHSPRFQGEEDNCSKGAEGGRHE---------------ALNYPENMAAVATVARPGPSCHPQSSSKGNGCKPRGSVSVTTGFRAQRTSRPTRLTCRERM-----IFVNFLKKFDRQLGAGGFKDGKPRILVPDSHVSHVNLQVVEWAISMNVELFQLPSHFSHMT*PLDVAAFGTFKKAVTSVLKPFRQQHGGRMPVKADMVELIE*SWVGNFTVPQIKVSFQG 4814
M R V+ + + A A+ G M+ +AA VFGV ++SI R +G ++ +V T+L+KE+ED +E LL+A L V RV L +VR CND R++PWD EKGPG R LR A S + + +E + R L + V E R H R +G E ++GA RH N EN VAT++ G + P KG + F + + TC + +F+ +LK F +QL G DGKP IL+ D H SHV+++V++ A+++ + LFQLPSH SH+T PLDV AFG+FKK+VT VL F + GG +P+K DM +I +W +FT K SF G
Sbjct: 1 MTRRKVDEEQVRKACAAIDDG-MSVRKAAEVFGVGRTSIVDRRRGKAAMNAKVGPETILSKEEEDSLEYILLFAARNFLAVDRVYLRDAVRRLCNDGRRIPWDPEKGPGKDWLAGFLRRHLRVAERSTRIFEANMITEDEEP-RMVQFYERWAALLDEVKPEANHVHNTDETEPPRXH--RRKGPE--AAEGARAHRHGNPSRHGXDCKVVGSMRSNSRENTTVVATISADGHTWAPTIIFKGQRLQ-------ADWFVERNGLEGAKYTCTDYSFMQGDLFIAYLKDFHKQLCDRGLLDGKPHILLLDGHASHVSVEVIKLAMNLKIILFQLPSHTSHITQPLDVVAFGSFKKSVTRVLASFYRNSGGLLPLKRDMPGVIADAWKLSFTPEINKSSFAG 387
BLAST of mRNA_H-paniculata_contig389.10149.1 vs. uniprot
Match: A0A6H5L1T0_9PHAE (Uncharacterized protein n=8 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1T0_9PHAE) HSP 1 Score: 189 bits (480), Expect = 1.710e-45 Identity = 139/404 (34.41%), Postives = 197/404 (48.76%), Query Frame = 3
Query: 3669 FQEYPTCLPSMLRHTVNPVKTQGAVDAVRSGQMTFHQAAPVFGVSKSSIKPRVKGHMTIDGQVRQPTVLAKEKEDEIEGKLLWATHRHLGVGRVGLMGSVRVDCNDDRKVPWDREKGPGRSIL-----REAPSSAGAT------------QPRLRS-----EQDHG*RRTSPESILHQLGENVDQPTVGGGPCVEYRRNRCHSPRFQGEEDNCSKGAEGGRHEALNYPENMAAVATVARPGPSCHPQSSSKGNGCKPRGSVSVTTGFRAQRTSRPTRLTCRERMIFVNFLKKFDRQLGAGGFKDGKPRILVPDSHVSHVNLQVVEWAISMNVELFQLPSHFSHMT*PLDVAAFGTFKKAVTSVLKPFRQQHGGRMPVKADMVELIE*SWVGNFTVPQIKVSFQG 4814
F + L SM R V+P + Q AVDAVRSG+M+ AA +G+ +S+ RVK + ID +V TVL+KE+ED +E L++A+ L +GR L +VR C D RKVPWD +KGPG S L R S AT +PRL++ + + PE IL+ + G + R + R N EN VAT+ G + HP KG +P + G + + T + + +F+++L+ +QL A G GK LV D H SH + IS++++LFQLPSH SH+T PLDV FGTFK +T VL + ++GGR PVK DM +I +W G+FT K +F+G
Sbjct: 5 FALFGVLLLSMGRKRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNICTDGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFYKAWAEYLEETKLPPERILNTDETSSTPQGTKSGKAIVARGTKVPGARRS------------------NSRENTTVVATIGADGHTFHPTIIFKGQRMQPAW-IQDNNGVPDAKYT-VTESSFIQSHVFLDYLRDLRKQLDARGLL-GKAA-LVLDGHASHTTFDAISLGISLDMDLFQLPSHTSHITQPLDVGTFGTFKMEITKVLTAYPLKNGGRSPVKRDMAGVIAEAWAGSFTPENNKAAFKG 386
BLAST of mRNA_H-paniculata_contig389.10149.1 vs. uniprot
Match: A0A6H5JUK8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK8_9PHAE) HSP 1 Score: 179 bits (455), Expect = 1.020e-43 Identity = 132/390 (33.85%), Postives = 189/390 (48.46%), Query Frame = 3
Query: 3669 FQEYPTCLPSMLRHTVNPVKTQGAVDAVRSGQMTFHQAAPVFGVSKSSIKPRVKGHMTIDGQVRQPTVLAKEKEDEIEGKLLWATHRHLGVGRVGLMGSVRVDCNDDRKVPWDREKGPGRSIL-----REAPSSAGAT---QPRLRSEQDHG*RRTSPESILHQLGENVDQPTVGGGPCVEYRRNRCHSPRFQGEEDNCSKGAEGGRHEALNYPENMAAVATVARPGPSCHPQSSSKGNGCKPRGSVSVTTGFRAQRTSRPTRLTCRERMIFVNFLKKFDRQLGAGGFKDGKPRILVPDSHVSHVNLQVVEWAISMNVELFQLPSHFSHMT*PLDVAAFGTFKKAVTSVLKPFRQQHGGRMPVKADMVELIE*SWVGNFTVPQIKVSFQG 4814
F + L SM R V+P + Q AVDAVRSG+M+ AA +G+ +S+ RVK + ID +V TVL+KE ED +E L++A+ L +GR L +VR C+D RKVPW+ +KGPG S L R S AT + +E D ++ L E P V + G + N EN V T+ G + HP KG +P A+ T T + + +F+++L+ +QL A G + GK LV D H SH + A+S++++ FQLPSH SH+T PLDV FG FKK +T VL + ++GGR PVK DM +I +W+G+FT + +G
Sbjct: 43 FALFGVLLLSMGRKRVDPEQAQKAVDAVRSGEMSLRVAAKTYGLPLASLHDRVKKKVAIDAKVGPGTVLSKEGEDFVEDVLIYASRHFLLLGRRELKDAVRNICSDGRKVPWNPDKGPGDSWLEGVMTRHPGLSERATHINEANPINEDDERRLEAFYKAWAEYLAETKLPPEXVSAVSVST-----------------AVGTKVPGARRSNSRENTTVVPTIGAGGHTFHPTIIFKGQRMQPAWIQDNNGVPDAKYTI--TEFSFTQSHVFLDYLRDLRQQLDARGLQ-GKTA-LVLDGHASHTTFDAISLALSLDIDAFQLPSHTSHITQPLDVGTFGIFKKEITKVLTAYPLKNGGRSPVKRDMAGVIAEAWIGSFTPENNMAALKG 411
BLAST of mRNA_H-paniculata_contig389.10149.1 vs. uniprot
Match: A0A6H5KK08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK08_9PHAE) HSP 1 Score: 175 bits (443), Expect = 1.380e-43 Identity = 140/409 (34.23%), Postives = 199/409 (48.66%), Query Frame = 3
Query: 3699 MLRHTVNPVKTQGAVDAVRSGQMTFHQAAPVFGVSKSSIKPRVKGHMTIDGQVRQPTVLAKEKEDEIEGKLLWATHRHLGVGRVGLMGSVRVDCNDDRKVPWDREKGPGRSIL-----REAPSSAGAT------------QPRL----------------RSEQDHG*RRTSPESILHQL--GENVDQPTVGGGPCVEYRRNRCHS-PR-FQGEEDNCSKGAEGGRHEALNYPENMAAVATVARPGPSCHPQSSSKGNGCKPRGSVSVTTGFRAQRTSRPTRLTCRERMIFVNFLKKFDRQLGAGGFKDGKPRILVPDSHVSHVNLQVVEWAISMNVELFQLPSHFSHMT*PLDVAAFGTFKKAVTSVLKPFRQQHGGRMPVKADMVELIE*SWVGNFTVPQIKVSFQG 4814
M R V+P + Q A+DAVRSG+M+F AA +G++ +S+ RVK + ID +V TVL KE+ED +E L+ A L +GR L +VR C D RKVPWD +KGPG S L R S AT +PRL R + G +T+ ++ G+ + GP ++ R+R S PR + S G + N EN AVA++ G + +P + KG +P S+ G T T + + +F+++L+ QL G GK LV D H SH + A S++++LFQL SH SH+T PLDV FGTFKK +T VL + + GGR PVK DM +I +W +FT +F+G
Sbjct: 1 MGRARVDPERAQKAIDAVRSGEMSFRVAADTYGLNPTSLHRRVKKEVAIDARVGPGTVLCKEEEDFVEDVLMHAFRHFLLLGRGELKEAVRKICLDGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHICEANRINEDDEPRLEAFYETWEACLAETSSRRXKQTGSTKTTSLALKPSTRHGKRASRRQAHAGPHHQHGRDRRSSTPRGTTSGKAIVSTGTKVPGARRSNSRENTTAVASIGTDGHTHNPITIYKGQRMQP-ASIQDKNGV-PDATYTVTESSFIQSHVFLDYLRDLREQLDGG--LQGKVA-LVLDGHASHTTFDGISLATSLDIDLFQLRSHTSHITQPLDVGTFGTFKKELTRVLTAYPLKIGGRSPVKRDMAGVIAEAWRASFTPANNMAAFKG 404
BLAST of mRNA_H-paniculata_contig389.10149.1 vs. uniprot
Match: A0A6H5JV04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV04_9PHAE) HSP 1 Score: 180 bits (457), Expect = 2.260e-43 Identity = 132/395 (33.42%), Postives = 195/395 (49.37%), Query Frame = 3
Query: 3699 MLRHTVNPVKTQGAVDAVRSGQMTFHQAAPVFGVSKSSIKPRVKGHMTIDGQVRQPTVLAKEKEDEIEGKLLWATHRHLGVGRVGLMGSVRVDCNDDRKVPWDREKGPGRSILREAPSSAGATQ--PRLRSEQD--HG*RRTSPES-------------ILHQLGENVDQPTVGGGPCVEYRRNRCHSPRFQGEEDNCSKGAEGGRHEALNYPENMAAVATVARPGPSCHPQSSSKGNGCKPRGSVSVTTGFRAQRTSRP-TRLTCRERM-----IFVNFLKKFDRQLGAGGFKDGKPRILVPDSHVSHVNLQVVEWAISMNVELFQLPSHFSHMT*PLDVAAFGTFKKAVTSVLKPFRQQHGGRMPVKADMVELIE*SWVGNFTVPQIKVSFQG 4814
M R V+ + Q A +AVR G M+ +AA V+ + + S+K R+ G + +D +V TV+++E+E+ IE LL+A L V R+ L+ +VR+ C D RK PWD EKGPG+ L AG + PR+R + R + ES +L L D + N+ C G + N EN V T++ G + P KG +P + A++ P R TC + +F+ +LK F +QL G DGKP IL+ D H SHV+++V++ A+ +N+ LFQLPSH SH+T PLDV AFG FK+ VT VL + + GG +P K D+ +I +W FT + + SF G
Sbjct: 1 MGRRRVDAQQAQKACEAVRGG-MSVRKAAKVYDIDRLSLKRRLDGEVAMDAKVGPGTVMSEEEENSIEDCLLYAGRNCLAVSRLHLLETVRLLCLD-RKTPWDPEKGPGKDWL------AGFLERHPRVRERTTRIYEANRVTDESEPRIVEFYRKWAALLEDLKPEADHVHNTDETGTTPQGNKTMKAY-------CQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQP--------DWFAEKNGPPDARYTCTDSSFMQGNVFIKYLKDFHQQLCKRGLIDGKPHILLLDGHASHVSVEVIQLAMELNIVLFQLPSHTSHITQPLDVVAFGAFKREVTKVLSDYYRVSGGLLPQKRDVPGVIAAAWGATFTSERNRSSFAG 372 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig389.10149.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig389.10149.1 >prot_H-paniculata_contig389.10149.1 ID=prot_H-paniculata_contig389.10149.1|Name=mRNA_H-paniculata_contig389.10149.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=179bp MSGAQRLSLARRGTIYTPCRTYSTNIELPTSFCEFQEYPTCLPSMLRHTVback to top mRNA from alignment at H-paniculata_contig389:20183..25861- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig389.10149.1 ID=mRNA_H-paniculata_contig389.10149.1|Name=mRNA_H-paniculata_contig389.10149.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5679bp|location=Sequence derived from alignment at H-paniculata_contig389:20183..25861- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig389:20183..25861- >mRNA_H-paniculata_contig389.10149.1 ID=mRNA_H-paniculata_contig389.10149.1|Name=mRNA_H-paniculata_contig389.10149.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1074bp|location=Sequence derived from alignment at H-paniculata_contig389:20183..25861- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |