mRNA_H-paniculata_contig3889.10146.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig3889.10146.1
Unique NamemRNA_H-paniculata_contig3889.10146.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig3889.10146.1 vs. uniprot
Match: D8LTD6_ECTSI (Protein kinase domain-containing protein (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTD6_ECTSI)

HSP 1 Score: 170 bits (431), Expect = 1.930e-42
Identity = 94/153 (61.44%), Postives = 106/153 (69.28%), Query Frame = 1
Query:    1 QDYASDTFALALAVVHLFTGEAPYEEIMEEVECPDDLYDALANTWSEEKHSQYSVLSDIILDD----------------DDATLFNTFYRYLVLFGVPDRSTLEEAFGVDNPVWTAVGVLLGWKA-NRARGRRAAGLSAM-SKRFCRKLREDQ 405
            Q YASDTFALALA  HLFTGEAPYEEIMEEVECPD+LYDAL  TW  +++ QY  + DII++D                 D TL +TFYRYLVLFGVPDR  LEEA+G DNPVW AVG LLGWK   R RG RA   SA  SK+FCR+L  D+
Sbjct: 2133 QGYASDTFALALAAFHLFTGEAPYEEIMEEVECPDELYDALVQTW--DQNPQYVDVCDIIINDGSDXXXXXXXXXXXXTQDPTLLHTFYRYLVLFGVPDRDRLEEAYGTDNPVWKAVGPLLGWKQPRRGRGGRATAASATASKKFCRQLDRDR 2283          
BLAST of mRNA_H-paniculata_contig3889.10146.1 vs. uniprot
Match: A0A835ZET0_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZET0_9STRA)

HSP 1 Score: 150 bits (380), Expect = 7.460e-37
Identity = 88/207 (42.51%), Postives = 120/207 (57.97%), Query Frame = 1
Query:    1 QDYASDTFALALAVVHLFTGEAPYEEIMEEVECPDDLYDALANTWSEEKHSQYSVL-----------SDIILDDDDATLFNTFYRYLVLFGVPDRSTLEEAFGVDN----PVWTAVGVLLGWKANRARGRRAAGLSAMSKRFCRKLREDQARFSLVKGTYPAIARGRARLQALPGAMELVQAMGSFCPADRPTMLEVLTHEVFAGIR 576
            Q YA DTFA  LA +HLFTG+APYEE+M+EV+CP  L   L   WS  +  Q+ V+           SD   +D+D TL+NT YRY VL GVP +S ++     ++     +W A   +L     R + R+    + +SK      R DQA+FS+  GT P + R R R+ A+PGA+ELVQ+M  F P  RPTML +L  EVF+G+R
Sbjct:  293 QGYALDTFAAGLAALHLFTGQAPYEELMDEVQCPAKLRVELRKAWS--RAPQFDVVVATNKRLMDSSSDESDEDEDNTLYNTLYRYFVLLGVPGQSGVDSNSAAEHLQESSIWRAAVQVLVPSTVRGKTRKGQDAAVISK-----FRTDQAKFSIATGTAPCMVRARGRMAAIPGALELVQSMLEFLPERRPTMLRLLKSEVFSGLR 492          
BLAST of mRNA_H-paniculata_contig3889.10146.1 vs. uniprot
Match: A0A5D6Y0B4_9STRA (Protein kinase domain-containing protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y0B4_9STRA)

HSP 1 Score: 150 bits (378), Expect = 1.310e-35
Identity = 92/224 (41.07%), Postives = 124/224 (55.36%), Query Frame = 1
Query:    1 QDYASDTFALALAVVHLFTGEAPYEEIMEEVECPDDLYDALANTWSE-EKHSQYSVLSDIILDDDDATLFNTFYRYLVLFGVPDRSTLEEAFGVDNPVWTAVGVLLG------WKANRARGRRAAGLSAMS-KRFCRKLREDQARFSLVKGTYPAIARGRARLQALPGAMELVQAMGSFCPADRPTMLEVLTHEVFAGIRAGVDDAKVGAEAGERLGGKVLDFM 648
            Q +A DTF+L L+++HLFTG APYEEI+E V CP DL  AL   W+   K S ++VL  +I DD +  L++T YRYLVLFG+P+ +    A      VW A+   L        +  R+R   A+  +A S      +  +D+ARFSL  GT   I RGRARL+A PG +EL+ ++  F P  RPTM  VL H  FA +R          EA +  G    DF+
Sbjct:  760 QSFAGDTFSLGLSLLHLFTGSAPYEEILESVRCPRDLLQALKYIWTNPRKTSGFAVLRRVIKDDSENILYHTLYRYLVLFGLPEETPTRGA----EKVWQAIRKYLYPQEAAMTQTRRSRSATASARAAKSASSAANQFEQDRARFSLASGTEATIQRGRARLEAAPGGLELLSSLVHFDPTKRPTMKSVLLHPFFAALRV---------EAQQHGGALTADFV 970          
BLAST of mRNA_H-paniculata_contig3889.10146.1 vs. uniprot
Match: A0A425C203_9STRA (Protein kinase domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A425C203_9STRA)

HSP 1 Score: 141 bits (355), Expect = 3.090e-34
Identity = 84/204 (41.18%), Postives = 121/204 (59.31%), Query Frame = 1
Query:    1 QDYASDTFALALAVVHLFTGEAPYEEIMEEVECPDDLYDALANTW-SEEKHSQYSVLSDIILDDDDATLFNTFYRYLVLFGVPDRSTLEEAFGVDNPVWTAVGVLLG----------WKANRARGRRAAGLSAMSKRFCRKLREDQARFSLVKGTYPAIARGRARLQALPGAMELVQAMGSFCPADRPTMLEVLTHEVFAGIRA 579
            Q YA+DTF L L V+HLFTG APYEEI+E+V CP +L   L   W S  K+S +SV+  ++  DDD TL +T YR++VLFG+P R+      G+D  VW  +   L           W++ R+ G+  A L A S +   +   DQ+ +S+  G+   I R R  LQ++PGAMEL+ ++  F PA RPT+ +V+ H VF+  R+
Sbjct:  171 QSYAADTFCLGLCVLHLFTGCAPYEEILEDVRCPVELLKDLKFVWMSPRKNSTFSVIKSVVRSDDDNTLCHTLYRFVVLFGLPGRNPS----GIDK-VWQLLLKHLRPDDPALKHFQWRSRRSTGKDGAQLHASSTKS--QFDHDQSLYSIASGSNDIICRCREGLQSIPGAMELLNSLVDFDPAKRPTLKQVMYHPVFSSFRS 367          
BLAST of mRNA_H-paniculata_contig3889.10146.1 vs. uniprot
Match: A0A8K1CDV1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CDV1_PYTOL)

HSP 1 Score: 142 bits (357), Expect = 6.800e-33
Identity = 84/195 (43.08%), Postives = 116/195 (59.49%), Query Frame = 1
Query:    1 QDYASDTFALALAVVHLFTGEAPYEEIMEEVECPDDLYDALANTW-SEEKHSQYSVLSDIILDDDDATLFNTFYRYLVLFGVPDRSTLEEAFGVDNPVWTA-VGVLLGWKANRARGRRAAGLSAMSKRFCRKLREDQARFSLVKGTYPAIARGRARLQALPGAMELVQAMGSFCPADRPTMLEVLTHEVFAGIRA 579
            Q +A+DTF+L L ++HLFTG APYEE++E V CP  L   L   W S +K+S +SVL  +  DD D  L +T YRYLV+ G+P  +  E    +D  +W+  V  L   ++  +R  R A    M K    +  ED+A+FSL  G  P I RGR RL  +PGA  L+Q++ +F PADRPTM + L HE F  +R+
Sbjct:  692 QSFAADTFSLGLCLLHLFTGSAPYEEVLESVRCPPALLQDLKRVWMSNKKNSGFSVLRQVANDDPDDILMHTIYRYLVMLGMPHTNPSEHK-QIDR-IWSILVKHLRPEESPSSRPSRRAAKMPM-KTAKEQFEEDRAKFSLANGNNPTIKRGRDRLSRIPGAQALLQSLVAFNPADRPTMKQTLQHEFFWSLRS 883          
BLAST of mRNA_H-paniculata_contig3889.10146.1 vs. uniprot
Match: A0A6A3JYB9_9STRA (Protein kinase domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3JYB9_9STRA)

HSP 1 Score: 136 bits (342), Expect = 6.020e-31
Identity = 86/239 (35.98%), Postives = 137/239 (57.32%), Query Frame = 1
Query:    1 QDYASDTFALALAVVHLFTGEAPYEEIMEEVECPDDLYDALANTW-SEEKHSQYSVLSDIILDDDDATLFNTFYRYLVLFGVPDRSTLEEAFGVDNPVWTAVGVLL-----GWKANRARGRRAAGLSAMSKRFCRK--LREDQARFSLVKGTYPAIARGRARLQALPGAMELVQAMGSFCPADRPTMLEVLTHEVFAGIRAGVDDAKVGAEAGERLGGKVLDFMAFLRREGDNRPLVDV 693
            Q +A+DTF+L L ++HLFTG APYEEI+E V+CP DL   L + W S  K+S++SV+ ++   DD+ TL +T YR++VLFG+P++  ++   G+D  VW  +   L          + R RR AG++A       K     DQ+ FSL  G+   I R R  L ++PGAM+L+  +  F P+ RPT+ +V+ H  F+ +R+   + +  A+        V++   ++ R+ D R + DV
Sbjct:  665 QSFAADTFSLGLCLLHLFTGSAPYEEILENVQCPVDLLKDLKSIWMSPRKNSEFSVIKNVARGDDENTLCHTLYRFIVLFGLPEQVPIKNK-GIDR-VWQVLLKHLRPEDAAVNHPQRRSRRTAGVNAAQHTKTTKDLYAHDQSLFSLASGSNAIIRRCREGLNSIPGAMDLLMKLVDFDPSKRPTLKQVMYHPTFSYLRSTSREKETQADY-------VINH--YMTRDQDTRLVPDV 892          
BLAST of mRNA_H-paniculata_contig3889.10146.1 vs. uniprot
Match: A0A3M6VC18_9STRA (Protein kinase domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VC18_9STRA)

HSP 1 Score: 135 bits (341), Expect = 8.800e-31
Identity = 87/246 (35.37%), Postives = 135/246 (54.88%), Query Frame = 1
Query:    1 QDYASDTFALALAVVHLFTGEAPYEEIMEEVECPDDLYDALANTW-SEEKHSQYSVLSDIILDDDDATLFNTFYRYLVLFGVPDRSTLEEAFGVDNPVWTAVGVLLGW-------------KANRARGRRAAGLSAMSKRFCRKLREDQARFSLVKGTYPAIARGRARLQALPGAMELVQAMGSFCPADRPTMLEVLTHEVFAGIRAGVDDAKVGAE-------AGERLGGKVLDFMAFLRREGDN 675
            Q YA+DTF L L V+HLFTG APYEEI+E+V CP +L   L   W S  K+S +SV+  +   DD+ TL +T YR++VLFG+P+R+  E      N +     +LL               ++ R  G  +A L A+S +   +   DQ+ +S+  G+   + R R  LQ++PGAMEL++++  F PA RPT+ +V+ H +F+  R+   + +V  +       +  R G  +LD  +F+   G N
Sbjct:  642 QSYAADTFCLGLCVLHLFTGCAPYEEILEDVRCPIELLKDLKFIWMSPRKNSGFSVIKSVARGDDENTLCHTLYRFIVLFGLPERNPSER-----NEIEKVWQLLLKHLRPDDPALKHPQRRSRRTNGTSSAQLHALSTKS--QFDHDQSLYSITSGSNDVVRRCREGLQSIPGAMELLKSLVDFDPAKRPTLKQVMYHPIFSSFRSPSKEKEVPPDYVISYYSSRHRSGRMILD-RSFMSHTGSN 879          
BLAST of mRNA_H-paniculata_contig3889.10146.1 vs. uniprot
Match: A0A4D9D2S7_9STRA (Protein kinase domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D2S7_9STRA)

HSP 1 Score: 135 bits (339), Expect = 2.010e-30
Identity = 91/233 (39.06%), Postives = 120/233 (51.50%), Query Frame = 1
Query:    1 QDYASDTFALALAVVHLFTGEAPYEEIMEEVECPDDLYDALANTWSEEKHSQYSVLSDIIL-------DDDDATLFNTFYRYLVLFGVPDRSTLEEAFGVD---NPVWTAVGVLLG-------------------WKANRARGRRAA--------GLSAMS----KRFCRKLREDQARFSLVKGTYPAIARGRARLQALPGAMELVQAMGSFCPADRPTMLEVLTHEVFAGIR 576
            QD+A+D F+L LAV HLF G  PYEE+MEEV CP  L  AL   W   +   Y+VL  ++        D++D TL +TFYRYLVL G+P      E+ G     NPVW AV   +G                     + R R  RA          L+A      +R  R+  +D A FSL  G++P++ RGR RL ALPGA  L++A+  + P  RP M E LT E+FA +R
Sbjct: 1986 QDFAADAFSLGLAVWHLFAGRQPYEELMEEVRCPPPLRRALNKAW---RGKGYTVLRKVLEAGEDEEEDEEDCTLHHTFYRYLVLLGLPSAEEQRESTGRTRGLNPVWKAVASCIGPYSAGQGQEDKGTAAPIAFTMSTRKRTTRACVAGTPLPPSLAASDVTTKERVTRQYWQDHASFSLRYGSHPSVLRGRERLAALPGAFSLLRALLDYLPQRRPGMYEALTSELFACLR 2215          
BLAST of mRNA_H-paniculata_contig3889.10146.1 vs. uniprot
Match: A0A833SWJ9_PHYIN (Protein kinase domain n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SWJ9_PHYIN)

HSP 1 Score: 132 bits (332), Expect = 1.180e-29
Identity = 81/216 (37.50%), Postives = 123/216 (56.94%), Query Frame = 1
Query:    1 QDYASDTFALALAVVHLFTGEAPYEEIMEEVECPDDLYDALANTW-SEEKHSQYSVLSDIILDDDDATLFNTFYRYLVLFGVPDRSTLEEAFGVDNPVWTAVGVLLG------------WKANRARGRRAAGLSAMSKRFCRKLREDQARFSLVKGTYPAIARGRARLQALPGAMELVQAMGSFCPADRPTMLEVLTHEVFAGIRAGVDDAKVGAE 609
            Q YA+DTF+L L ++HLFTG APYEE +E V+CP +L   L   W S +K+S++SV+  +   DD+ TL +T YR+LVLFG+P+R+   E+ GVD  VW  +   L              K   A G   A L    ++F      DQA +S+  G+   + R R  L  +PGAM+L++ M  F P+ RPT+ +V+ H +F+ +R+  +  +  A+
Sbjct:  644 QSYAADTFSLGLCLLHLFTGSAPYEETLEAVKCPAELLKDLKALWMSRQKNSKFSVIKSVARGDDENTLCHTLYRFLVLFGLPERNP-SESKGVDK-VWKLLVKHLRPEESHSATKRPQRKCKLAVGANKARLKTAKEQFY----HDQALYSIASGSNDIMYRCREGLMTIPGAMDLLKQMVDFNPSKRPTLKQVMYHPMFSSLRSPSEKTQAPAD 853          
BLAST of mRNA_H-paniculata_contig3889.10146.1 vs. uniprot
Match: K3W6L9_GLOUD (Protein kinase domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W6L9_GLOUD)

HSP 1 Score: 131 bits (330), Expect = 2.230e-29
Identity = 85/218 (38.99%), Postives = 122/218 (55.96%), Query Frame = 1
Query:    1 QDYASDTFALALAVVHLFTGEAPYEEIMEEVECPDDLYDALANTW-SEEKHSQYSVLSDIILDDDDATLFNTFYRYLVLFGVPDRSTLEEAFGVDNPVWTAVGVLLGWKA-----------NRARGRRA-AGLSAMSKRFCRK--LREDQARFSLVKGTYPAIARGRARLQALPGAMELVQAMGSFCPADRPTMLEVLTHEVFAGIRAGVDDAKVGAE 609
            + Y +DTFAL L ++HL TG APYEEI+++V CP +L   L   W +  K S +SVL  ++ DD +  L++T YRYLVLFG+P+ +   +  GVD  VW  +   L  +A           N  R R A A   A++K    K    +D+A++SL  G+   IARGRAR++A PGA E++  +  F P  RPTM  VL H +F  ++   D     A+
Sbjct:  688 RSYGADTFALGLCLLHLLTGSAPYEEILDDVRCPLELLKDLDRIWMNPRKSSGFSVLKRVVKDDPEKVLYHTLYRYLVLFGLPEENPSADK-GVDK-VWLVLLKHLRPEALAVAQPAVAAPNTRRSRSATASARAVAKSVSVKDMFEQDRAKYSLDHGSNAMIARGRARMEATPGAREVLTTLVHFNPLKRPTMKSVLLHPLFQSLQVQGDPESKSAD 903          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3889.10146.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTD6_ECTSI1.930e-4261.44Protein kinase domain-containing protein (Fragment... [more]
A0A835ZET0_9STRA7.460e-3742.51Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A5D6Y0B4_9STRA1.310e-3541.07Protein kinase domain-containing protein (Fragment... [more]
A0A425C203_9STRA3.090e-3441.18Protein kinase domain-containing protein n=1 Tax=P... [more]
A0A8K1CDV1_PYTOL6.800e-3343.08Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6A3JYB9_9STRA6.020e-3135.98Protein kinase domain-containing protein n=5 Tax=P... [more]
A0A3M6VC18_9STRA8.800e-3135.37Protein kinase domain-containing protein n=2 Tax=P... [more]
A0A4D9D2S7_9STRA2.010e-3039.06Protein kinase domain-containing protein n=1 Tax=N... [more]
A0A833SWJ9_PHYIN1.180e-2937.50Protein kinase domain n=1 Tax=Phytophthora infesta... [more]
K3W6L9_GLOUD2.230e-2938.99Protein kinase domain-containing protein n=1 Tax=G... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3889contigH-paniculata_contig3889:12899..16293 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score125.6
Seed ortholog evalue2.7e-26
Seed eggNOG ortholog2880.D8LTD6
Hectar predicted targeting categoryother localisation
EggNOG OGs28UP7@1,2R1E5@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size1271
Cds size615
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930193.0937884-UTR-H-paniculata_contig3889:12898..131721622930193.0937884-UTR-H-paniculata_contig3889:12898..13172Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3889 12899..13172 -
1691481185.4665668-UTR-H-paniculata_contig3889:12898..131721691481185.4665668-UTR-H-paniculata_contig3889:12898..13172Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3889 12899..13172 -
1622930193.1070669-UTR-H-paniculata_contig3889:13187..134881622930193.1070669-UTR-H-paniculata_contig3889:13187..13488Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3889 13188..13488 -
1691481185.4761305-UTR-H-paniculata_contig3889:13187..134881691481185.4761305-UTR-H-paniculata_contig3889:13187..13488Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3889 13188..13488 -
1622930193.1898823-UTR-H-paniculata_contig3889:16212..162931622930193.1898823-UTR-H-paniculata_contig3889:16212..16293Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3889 16213..16293 -
1691481185.527488-UTR-H-paniculata_contig3889:16212..162931691481185.527488-UTR-H-paniculata_contig3889:16212..16293Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3889 16213..16293 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930193.1225562-CDS-H-paniculata_contig3889:13488..138631622930193.1225562-CDS-H-paniculata_contig3889:13488..13863Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3889 13489..13863 -
1691481185.4866874-CDS-H-paniculata_contig3889:13488..138631691481185.4866874-CDS-H-paniculata_contig3889:13488..13863Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3889 13489..13863 -
1622930193.1361327-CDS-H-paniculata_contig3889:14364..144641622930193.1361327-CDS-H-paniculata_contig3889:14364..14464Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3889 14365..14464 -
1691481185.4967043-CDS-H-paniculata_contig3889:14364..144641691481185.4967043-CDS-H-paniculata_contig3889:14364..14464Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3889 14365..14464 -
1622930193.153208-CDS-H-paniculata_contig3889:15217..153481622930193.153208-CDS-H-paniculata_contig3889:15217..15348Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3889 15218..15348 -
1691481185.5072792-CDS-H-paniculata_contig3889:15217..153481691481185.5072792-CDS-H-paniculata_contig3889:15217..15348Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3889 15218..15348 -
1622930193.1725047-CDS-H-paniculata_contig3889:16203..162121622930193.1725047-CDS-H-paniculata_contig3889:16203..16212Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3889 16204..16212 -
1691481185.5174375-CDS-H-paniculata_contig3889:16203..162121691481185.5174375-CDS-H-paniculata_contig3889:16203..16212Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3889 16204..16212 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3889.10146.1prot_H-paniculata_contig3889.10146.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig3889 13489..16212 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig3889.10146.1

>prot_H-paniculata_contig3889.10146.1 ID=prot_H-paniculata_contig3889.10146.1|Name=mRNA_H-paniculata_contig3889.10146.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=205bp
MEEVECPDDLYDALANTWSEEKHSQYSVLSDIILDDDDATLFNTFYRYLV
LFGVPDRSTLEEAFGVDNPVWTAVGVLLGWKANRARGRRAAGLSAMSKRF
CRKLREDQARFSLVKGTYPAIARGRARLQALPGAMELVQAMGSFCPADRP
TMLEVLTHEVFAGIRAGVDDAKVGAEAGERLGGKVLDFMAFLRREGDNRP
LVDV*
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mRNA from alignment at H-paniculata_contig3889:12899..16293-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig3889.10146.1 ID=mRNA_H-paniculata_contig3889.10146.1|Name=mRNA_H-paniculata_contig3889.10146.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3395bp|location=Sequence derived from alignment at H-paniculata_contig3889:12899..16293- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGGACTATGCCAGCGACACGTTTGCCCTGGCGCTTGCGGTTGTCCATTT ATTCACCGGGGAAGCCCCTTACGAAGAGATAATGGAGGAGGTAAGTTGAT CGTGTTTTATCCCCCCCCTGACACGTGGCTATATATATTTTTTTAACCCC CGGAAGGCTGAGGCGAAAACCTTTATCCGATGCTTCCATACTCAAGTATT TCTACCGAAGTATTTCGACATTTCCTTCAACAGAACAGAGTTATTTATCC CTTTGCGGGGTAGGCGCCACCCCGGTTCGGCTGAGCCAAGTAGGCAGTGT GGGGGTTGCACCCAATGAAAGACCTCTGACTAGACTTTCAGTCATGCTCA GTTCACGAGCTACCCTACTCGTTCGGGCGTAGGTCCGTGGATGCGGCTAG TTCAGTCATGTTTTGGTCTGTATCCTTGTCTAAAAAAAAGTTATTTCATG TTTTTATGTAACCTTTGGCTAGATGGACGGCGCAATCGTCGATTGATTGT ATTCAGCTAGCTACGCGAAGAGAGGAGAATATAGCAACTAATGACTTGGG GTCAAGAGTTGAACGTTGTACTATTTAATCGGTTCTTCAATTTCCACAAA CGTTTGCCTAATTGAACTATTGGTGTTCGGGTGTTGTGTACAGTGCCCTC TCGCGTCCAAAGTCTGTTCGGGAGGGTCTGGATAAAGTGGCTGTCATGCC CCCTCCCCCCCCCCCACCCGAGAAACCTCAATGATAAGTACACTTATTTT TTCTAGGGGTATAATTTATCAGGAAGTTAATAATTCCGAAAAAATGCGCG GTAAGAAATGGTCTAACGATGAAAATAAATGCTAATTCGGCTGTGCTTGA TGAATAGCCTACCACAAGTTAGCCATGATATTCCTAAATCCACATTCATT AAATGCGGTGTTTTCTCGTCCGTCGTTTGGGCGCGCGGGCGGCAGGTTGA ATGTCCGGATGACCTGTACGATGCTCTCGCGAACACCTGGTCGGAGGAGA AGCACTCACAGTACAGCGTACTCTCTGACATCATTTTGGATGATGACGAT GCGACCCTGTTCAACACCTTTTATAGGTGAGTGACTACGTTGCTTTGCCG ATAGTGGTGTGGTCGTTTCCCCAAGGAAATGAAGGATGATTCGGTCAGCA CTTTGACTGAGACAGATACGAGTGGTATATTCACAGCAGGGCAATAGCAC CAAGTTAATAAAAGAAAAATAGTAGTCCCATGGCTGACTTCGATAAGGAC GACTTCCCTTGCTGCCGAAGCGTCAACGTCTGATCTTTTAACTAGAATTT TCCATGTTCAACCTCCTGAGTCCTGGGGGGTGTATTGTAACATTTTGTGA CCTGCGAAATTTGACAGTCCCATGTCTCAAGATGGAGGGAGGGGGGGGTA CCGATACGAGACCGACGAAATTTGTGTTGTCGGGGAAGATATCGTTTTGG TGTACGGTGTCCAGTGCCACGCGCTGAAAAGTATCCAGGAGTGGCAAGAG GTAAAGGGGCCAATTGACCATTTTGGTTTCAACCATTGCACGTACACGGC TAGCGTGCTGCAGCTGCAACGTCATGTACTTTTACTACGATTGATGTGGA GGTAGTACAGCTGACAGACTGCAGTGCACATATTGGTTTCATCGAGCGGT GGCAGTCAACTGGACAGTGCAAGCGGCGTGATAGTCGGTAGAGTTTCTCT ATTTTCTACACTACTTTGTTTGCCTCACCTCCCTGAAAACGTAAGCATAC TGCAACAAGTATGTCTTCGAGACAGCCTTCGTCTACACTCTTGAGATCCA ATGCACATGCTTTCTCCACACCTCAACAGATACCTGGTTCTCTTCGGGGT ACCAGACCGGTCAACTTTGGAGGAGGCATTTGGCGTCGACAATCCTGTGT GGACCGCGGTAGGCGTGCTGCTTGGATGGGTGAGACAACTGAATAGTAAG CTTCAAACACTTATCGTGAGGACAACTCGCAAGCCCTATCCGGGAACGTG GGGAAGAGCGATTGGCCATCGGAAATCGCTCGATAGGAACGAGGCTCCGT CCTCCCAAAGACGCGTGGTGAACGGTGCAAGAACTGTGGCACGCATAACA TAAGTACCCCCCCCCCTCCCTTCTCCCTCTTGCATGTGTTGTCCTTCCTG AGGCGTGTTCATTAGAGAAAAAGCGGGACGCACTTGAATTTTACCCCTAC CAAAATCCGGTTTCAACATTCAGCATACTGAAACTTATGCACAATATAGT CGGTCTCTACTAGAAGAACAGCTACCGAATTCCGTTCGAGTAAAACAAAT CCTCGCTTTACTTGAATTTCTGCAGAAAAATTCACCGAGACCCATTTGTC ACCTCCCCCCCCCCCCCCCCCCCACCTCGGCCCGCCTCTGCACGCGCCTT TCCCCCCCTTGGCCCCCTTGAATGATGCAGAAAGCAAACAGGGCGCGAGG ACGACGCGCTGCCGGTCTCTCCGCCATGTCTAAACGGTTCTGTCGCAAGC TGCGTGAGGATCAAGCGCGGTTTTCCCTCGTGAAGGGGACGTATCCAGCG ATCGCAAGGGGTAGAGCGAGACTTCAGGCCCTCCCTGGTGCCATGGAGCT CGTGCAGGCGATGGGGAGTTTCTGTCCCGCTGATCGACCCACCATGCTGG AGGTGCTGACGCATGAGGTGTTTGCCGGGATTCGTGCTGGGGTCGATGAC GCGAAGGTTGGAGCTGAAGCCGGAGAACGCCTGGGAGGCAAAGTGCTAGA TTTCATGGCGTTTTTGAGGCGTGAAGGGGACAATAGGCCTTTGGTTGATG TGTAAACTGTTTTGTTTTCTTATTGTTGTATCTTGTTTTTTCGCTATCGG GTATTTCTTGTTTTTTTCCGTCATAACTAGGTGATGTGTGTCCGCGTTTT TATACGGATTTTTTTGCGTATTTGATTTTTCTTAAATCTTGTTTTGGATA GATTTTTTTTACTTTTTTTTGTCTTGTTTTTTGGATAGATTTTTCTTTTC TTGTCACTTTGGATTGGTTTTTCTTCTTTTTTCTTTTCTCGTCCTGCCTG TCGTGGAGACCTGTAGAGTTTTCGATGTTTAATTCAGCTTATTTTCCTTC CTGTTCAGCTGTGTGCTGGTTTTTGAAAACGTTGTCATGATTCCAGTCCA CATCCATCCACCAACCTGAGCTTCAAATGTTGTGTAAGCGGGATTTTGTG GATGTGCTACTTTATTCCTCGCTGTCCGTCGCCTGGAGGGTTGCGAGTTT TTGTCCGTTGAAAGGGTGTGGACTATTTGCGCCTGCCCCCATCGAGGTAG GCTGACTGTAGAACGAAACGGGATGTTGTGCATTGGTTGTTGGAACATAT TCGATAACAGAGGCGTTTGGTTGTGGCGAACAGGGATGATGGGGG
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Coding sequence (CDS) from alignment at H-paniculata_contig3889:12899..16293-

>mRNA_H-paniculata_contig3889.10146.1 ID=mRNA_H-paniculata_contig3889.10146.1|Name=mRNA_H-paniculata_contig3889.10146.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1230bp|location=Sequence derived from alignment at H-paniculata_contig3889:12899..16293- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGAGGAGATGGAGGAGGTTGAATGTCCGGATGACCTGTACGATGCTCT
CGCGAACACCTGGTCGGAGGAGAAGCACTCACAGTACAGCGTACTCTCTG
ACATCATTTTGGATGATGACGATGCGACCCTGTTCAACACCTTTTATAGG
TTGAATGTCCGGATGACCTGTACGATGCTCTCGCGAACACCTGGTCGGAG
GAGAAGCACTCACAGTACAGCGTACTCTCTGACATCATTTTGGATGATGA
CGATGCGACCCTGTTCAACACCTTTTATAGATACCTGGTTCTCTTCGGGG
TACCAGACCGGTCAACTTTGGAGGAGGCATTTGGCGTCGACAATCCTGTG
TGGACCGCGGTAGGCGTGCTGCTTGGATGGATACCTGGTTCTCTTCGGGG
TACCAGACCGGTCAACTTTGGAGGAGGCATTTGGCGTCGACAATCCTGTG
TGGACCGCGGTAGGCGTGCTGCTTGGATGGAAAGCAAACAGGGCGCGAGG
ACGACGCGCTGCCGGTCTCTCCGCCATGTCTAAACGGTTCTGTCGCAAGC
TGCGTGAGGATCAAGCGCGGTTTTCCCTCGTGAAGGGGACGTATCCAGCG
ATCGCAAGGGGTAGAGCGAGACTTCAGGCCCTCCCTGGTGCCATGGAGCT
CGTGCAGGCGATGGGGAGTTTCTGTCCCGCTGATCGACCCACCATGCTGG
AGGTGCTGACGCATGAGGTGTTTGCCGGGATTCGTGCTGGGGTCGATGAC
GCGAAGGTTGGAGCTGAAGCCGGAGAACGCCTGGGAGGCAAAGTGCTAGA
TTTCATGGCGTTTTTGAGGCGTGAAGGGGACAATAGGCCTTTGGTTGATG
TGTAAAAAGCAAACAGGGCGCGAGGACGACGCGCTGCCGGTCTCTCCGCC
ATGTCTAAACGGTTCTGTCGCAAGCTGCGTGAGGATCAAGCGCGGTTTTC
CCTCGTGAAGGGGACGTATCCAGCGATCGCAAGGGGTAGAGCGAGACTTC
AGGCCCTCCCTGGTGCCATGGAGCTCGTGCAGGCGATGGGGAGTTTCTGT
CCCGCTGATCGACCCACCATGCTGGAGGTGCTGACGCATGAGGTGTTTGC
CGGGATTCGTGCTGGGGTCGATGACGCGAAGGTTGGAGCTGAAGCCGGAG
AACGCCTGGGAGGCAAAGTGCTAGATTTCATGGCGTTTTTGAGGCGTGAA
GGGGACAATAGGCCTTTGGTTGATGTGTAA
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