mRNA_H-paniculata_contig3885.10139.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3885.10139.1 vs. uniprot
Match: D8LH90_ECTSI (Folate-binding protein YgfZ n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH90_ECTSI) HSP 1 Score: 518 bits (1334), Expect = 4.580e-176 Identity = 277/436 (63.53%), Postives = 330/436 (75.69%), Query Frame = 2
Query: 5 HTCKDVLVSGFEAGLPAGFRAEQVDQALRSRALLVDKSHYGIIRVEGDDRMRFLHSQGTNAFEGAKEGAVISTCFTTNMGRVVDFCEAVVFQDEVWLLSSPHRWKRLLETMDKFIFPMDKTTVSSLSEQTAVFYLAGPQAAKALSLAGCDNTPARGHAMEWEFEDQKVIVFGHERSTATATKREGVPVVANSDGVTEAE-EGLVTE----YSVLLPCAVSAKLWSALSGLPAVVIAGEAEWQHLRIKNGLPFPGKELTNDYNPLEAGLWHTVHFDKGCYIGQESISRVNAYNAVKTVLYGISFEVGGQVHEGDALVAEEDGARAGVVTSLLKPEEGVETQGLAYIRTQAGGVGLKVLTKDGGVRGTVIEVPYPTRSDAESAQPPVKKQ----EEAEAAAIYLEAEDEKAKEAARKAAKLEAMQKKLDALKARRKTT 1285
H ++VLVSGFEAG A RA+ V A S LLVDKSH+G+IRVEG+DR+RFLHSQGTNAFE A G V++TCFT N+GRVVDFCE VV D VWL+SSPHRW++LL TMDKFIFPMDKTTVSSLSE+ AVF LAGP+AA+ +++A C + P G ++EWEFE +KV++ GH R T T+ E V +++GV + E T+ YSV++P +VS+K+WSALS P+VV AGE EWQ LRIK G PFPGKELT DYNPLEAGLWH VHFDKGCYIGQESISRVNAYNAV LYG+SFE +G L +E G AGVVTS+L + GLAYIRT+AGGVGLK+ TK+G GTV++VPYPTRSDAESA PP KK+ ++A AAA L E+EKAKE ARKAAKLEAMQKK+DALKARRKT+
Sbjct: 110 HVLQNVLVSGFEAGTGARQRADAVADAAASGTLLVDKSHWGVIRVEGEDRLRFLHSQGTNAFERATVGQVVATCFTNNIGRVVDFCEGVVLDDAVWLISSPHRWQKLLGTMDKFIFPMDKTTVSSLSEELAVFSLAGPKAAETMAMAKCASCPEPGRSVEWEFEGEKVLIIGHARPL-TRTREEEEGVSHDAEGVLSGDGERQGTQQHPYYSVIVPVSVSSKVWSALSASPSVVAAGEEEWQTLRIKQGFPFPGKELTADYNPLEAGLWHAVHFDKGCYIGQESISRVNAYNAVSKALYGVSFEDSTSPEQGTELFVQETGKSAGVVTSMLDRDATSHPFGLAYIRTKAGGVGLKLSTKEGEPLGTVVQVPYPTRSDAESAMPPAKKEGDSGDKATAAAAVLGLEEEKAKEKARKAAKLEAMQKKIDALKARRKTS 544
BLAST of mRNA_H-paniculata_contig3885.10139.1 vs. uniprot
Match: A0A6H5JC00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC00_9PHAE) HSP 1 Score: 443 bits (1140), Expect = 8.250e-147 Identity = 249/445 (55.96%), Postives = 304/445 (68.31%), Query Frame = 2
Query: 5 HTCKDVLVSGFEAGLPAGFRAEQVDQALRSRALLVDKSHYGIIRVEGDDRMRFLHSQGTNAFEGAKEGAVISTCFTTNMGRVVDFCEAVVFQDEVWLLSSPHRWKRLLETMDKFIFPMDKTTVSSLSEQTAVFYLAGPQAAKALSLAGCDNTPARGHAMEWEFEDQKVIVFGHERSTATATKREGVPVVANSDGVTEAEEGLVTE------------YSVLLPCAVSAKLWSALSGLPAVVIAGEAEWQHLRIKNGLPFPGKELTNDYNPLEAGLWHTVHFDKGCYIGQESIS-RVNAYNAVKTVLYGISFEVGGQVHEGDALVAEE-DGARAGVVTSLLKPEEGVETQGLAYIRTQAGGVGLKVLTKDGGVRGTVIEVPYPTRSDAESAQPPVKKQ----EEAEAAAIYLEAEDEKAKEAARKAAKLEAMQKKLDALKARRKTT 1285
H ++VL+SGFEAG A RA+ V A S LLVDKSH+G+IRVEG+DR+RFLHSQGTNAFE A G V++TCFT N+GRVVDFCE VV D VWL+SSPHRW++LL TMDKFIFPMDKT VS LSE+ VF LAGP+AA+ ++LA C + P G ++EWEFE +KV++ GH R T T+ E +GV+ A EG++ YS+++P +VS+K+WSAL P+VV AGE EWQ LRIK G PFPGKELT DYNPLEAGLWH VHFDK +S S + G + G + + + AGVVTS+L + GLAYIRT+AGGVGLK+ TK+G GTV++VPYPTRSDAESA PP KK+ ++A AAA L E+EKAKE ARKAAKLEAMQKK+DALKARRKTT
Sbjct: 107 HVLQNVLISGFEAGTGARQRADAVANAAASGTLLVDKSHWGVIRVEGEDRLRFLHSQGTNAFERATAGQVVATCFTNNIGRVVDFCEGVVLDDAVWLISSPHRWQKLLGTMDKFIFPMDKTNVSGLSEELVVFSLAGPKAAETMALAKCASCPEPGRSVEWEFEGEKVLIIGHGRPL-TRTREE-------EEGVSRAAEGMLLGDGGGQGTQQHPYYSIIVPVSVSSKVWSALLASPSVVAAGEEEWQTLRIKQGFPFPGKELTADYNPLEAGLWHAVHFDKVAATSDKSPSPELTPTTPSAKPSTGCPSRTRPRPKRGQSFSCRKPERGDAGVVTSMLDRDATSHPFGLAYIRTKAGGVGLKLSTKEGESLGTVVQVPYPTRSDAESAMPPAKKEGDSGDKATAAAAVLGLEEEKAKEKARKAAKLEAMQKKVDALKARRKTT 543
BLAST of mRNA_H-paniculata_contig3885.10139.1 vs. uniprot
Match: A0A3M1T7S9_9CYAN (Folate-binding protein n=2 Tax=Cyanobacteria TaxID=1117 RepID=A0A3M1T7S9_9CYAN) HSP 1 Score: 237 bits (604), Expect = 2.550e-69 Identity = 144/364 (39.56%), Postives = 203/364 (55.77%), Query Frame = 2
Query: 26 VSGFEAGLPAGFRAEQVDQALRSRALLVDKSHYGIIRVEGDDRMRFLHSQGTNAFEGAKEGAVISTCFTTNMGRVVDFCEAVVFQDEVWLLSSPHRWKRLLETMDKFIFPMDKTTVSSLSEQTAVFYLAGPQAAKALSLAGCDNTPARGHAMEWEFEDQKVIVFGHERSTATATKREGVPVVANSDGVTEAEEGLVTE-YSVLLPCAVSAKLWSALSGLPAVVIAGEAEWQHLRIKNGLPFPGKELTNDYNPLEAGLWHTVHFDKGCYIGQESISRVNAYNAVKTVLYGISFEVGGQVHEGDALVAEEDGARAGVVTSLLKPEEGVETQGLAYIRTQAGGVGLKVLTKDGGVRGTVIEVPYPTR 1114
V+G + G A + QA++ A+L D+SH+G IRV GDDR+RFLH+Q TN F + G T F ++ R +D A V +D + LL SP+R ++++ +D+++FPMDK + ++E TA F L G +A L G D A G E+ V + AT + GL T Y++++ + +A LW L+ L AV + GE W+HLR+ G P P ELT DYNPLEAGLW T+ F+KGCYIGQE+I+R+N Y VKT L+GI + G + A ED + G +TS++ E G GLAYIRT+AGG GL V + G G ++EVP+ TR
Sbjct: 18 VAGVRVPMSFGNEAAAL-QAVQEGAVLYDRSHWGRIRVSGDDRVRFLHNQSTNDFNRLQAGQCCDTVFVSSTARTIDLATAFVTEDNILLLVSPNRRQQIMTWLDRYLFPMDKVELEDMTEVTACFSLIGENSAAFLEKLGIDTDLADGTHKIGPIEEMNVRI-------ATGS-------------------GLATAGYTLIVDVSDAATLWQCLTELGAVPL-GETAWEHLRVLEGRPVPDAELTEDYNPLEAGLWQTISFEKGCYIGQETIARLNTYQGVKTQLWGI--RLAAPAEPGTIITAGED--KIGTLTSVVATESGAV--GLAYIRTKAGGAGLTV--RVGETTGEIVEVPFLTR 345
BLAST of mRNA_H-paniculata_contig3885.10139.1 vs. uniprot
Match: A0A7S2SSE3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSE3_9STRA) HSP 1 Score: 238 bits (606), Expect = 2.990e-69 Identity = 152/397 (38.29%), Postives = 220/397 (55.42%), Query Frame = 2
Query: 98 ALLVDKSHYGIIRVEGDDRMRFLHSQGTNAFEGAKEGAVISTCFTTNMGRVVDFCEAVVFQDEVWLLSSPHRWKRLLETMDKFIFPMDKTTVSSLSEQTAVFYLAGPQAAKALSLAGCDNTPARGHAMEWEFEDQKVIVFGHERSTATATKREGVPVVANSDGVTEAEEGLVTEYSVLLPCAVSAKLWSALSGLPAVVIAGEAEWQHLRIKNGLPFPGKELTNDYNPLEAGLWHTVHFDKGCYIGQESISRVNAYNAVKTVLYGISFEVGGQVHEGDALVAEEDGARAGVVTSLLKPEEGVET--QGLAYIRTQAGGVGLKVLTKD-GGVRGTVIEVPYPTRSDAESAQPPVKKQEEAEAAAIYLEAEDEKAKEAARKAAKLEAMQKKLDALKARRK 1279
A+L D+S +G++ + G DR FLH Q TN A GA++ FTT GR VD C V + + +L SP R + + +++DK IFPMD+ T++ ++E+TAV+ L GP + L+ G + A G +EW+ V + G + EGV +V D E E ++ P + + + G EW+ R+ G P PGKELT+ PLE GL+HTVHF+KGCY+GQE++S+V NA++ L+G FE QV GD LV G RAGVVTS L + GV+ Q L ++ GG GL+V + GG+ G V ++P+ TR + +A PP ++++ + A A DEK E RK AKL+AMQ KLDA K ++K
Sbjct: 4 AVLFDRSSFGVLELSGADRAAFLHGQCTNDISNAGAGALLEASFTTPTGRAVDLCTVAVGAEALRVLVSPERRRSITDSLDKHIFPMDRVTLTDVTERTAVWSLVGPGTSGVLAALGAPSVKA-GTTVEWKVVGSSVDLLG-----VSGLAEEGVTLVVPEDAAAELWERFA-RFTDAAPTDANEDF--------TIRLGGSREWETFRVLQGRPAPGKELTDQVTPLEVGLFHTVHFNKGCYLGQETLSKVLNQNAMRQFLWGAIFE--DQVEAGDKLVVSGTGERAGVVTSALPFDAGVKPGCQTLVLLKKSMGGPGLEVKVEARGGITGQVHDIPFATRDVSLAAAPPRDSEDQSSSPADDG-AVDEKTAEDLRKEAKLKAMQAKLDAFKKKKK 382
BLAST of mRNA_H-paniculata_contig3885.10139.1 vs. uniprot
Match: A0A8J7JJN8_9CYAN (Folate-binding protein YgfZ n=1 Tax=Nodosilinea sp. LEGE 06152 TaxID=2777966 RepID=A0A8J7JJN8_9CYAN) HSP 1 Score: 236 bits (601), Expect = 6.630e-69 Identity = 143/359 (39.83%), Postives = 212/359 (59.05%), Query Frame = 2
Query: 44 GLPAGFRAE-QVDQALRSRALLVDKSHYGIIRVEGDDRMRFLHSQGTNAFEGAKEGAVISTCFTTNMGRVVDFCEAVVFQDEVWLLSSPHRWKRLLETMDKFIFPMDKTTVSSLSEQTAVFYLAGPQAAKALSLAGCDNTPARGHAMEWEFEDQKVIVFGHERSTATATKREGVPV-VANSDGVTEAEEGLVTEYSVLLPCAVSAKLWSALSGLPAVVIAGEAEWQHLRIKNGLPFPGKELTNDYNPLEAGLWHTVHFDKGCYIGQESISRVNAYNAVKTVLYGISFEVGGQVHEGDALVAEEDGARAGVVTSLLKPEEGVETQGLAYIRTQAGGVGLKVLTKDGGVRGTVIEVPYPTR 1114
G+P F ++ +AL + A+LVD+SH+G+I++ G DR+RFLH+Q TN F K G T F T+ R +D V D + +L+SP + +RLL+ MD++IFP D+ ++++L+ AVF L GP +A L G +E E + + H+R G+ + +A G+T V Y++L+P +A +W L+ V AGEA WQ LR++ G P PG ELT+DYNPLEAGLW + F KGCYIGQE+I+R+N Y VK L+GI + G + G+A+ A ++ + G++TS++ EG +GL YIRT+AGG GL+V G RGTV++VP+ R
Sbjct: 19 GVPLSFGSDADALKALSTGAVLVDRSHWGLIQMNGRDRLRFLHNQTTNTFTERKPGEGCDTVFVTSTARTIDLATVYVTDDALLMLTSPGQDQRLLDWMDRYIFPADQVSLTNLTGSMAVFSLMGPGSAACLETLGT--------VLESE------LPYAHQRRVNVG----GLSLRLAAGCGLT------VAGYTLLVPAEAAAPVWQQLTET-GVTPAGEALWQQLRVQQGRPAPGCELTDDYNPLEAGLWEAISFSKGCYIGQETIARLNTYQGVKQQLWGI--RLSGTANPGEAIFAADE--KVGLLTSVVDTPEG--PRGLGYIRTKAGGAGLEVSIA--GTRGTVVDVPFLAR 344
BLAST of mRNA_H-paniculata_contig3885.10139.1 vs. uniprot
Match: UPI00055D723C (folate-binding protein YgfZ n=1 Tax=Leptolyngbya sp. KIOST-1 TaxID=1229172 RepID=UPI00055D723C) HSP 1 Score: 232 bits (591), Expect = 1.900e-67 Identity = 134/359 (37.33%), Postives = 202/359 (56.27%), Query Frame = 2
Query: 38 EAGLPAGFRAEQVDQALRSRALLVDKSHYGIIRVEGDDRMRFLHSQGTNAFEGAKEGAVISTCFTTNMGRVVDFCEAVVFQDEVWLLSSPHRWKRLLETMDKFIFPMDKTTVSSLSEQTAVFYLAGPQAAKALSLAGCDNTPARGHAMEWEFEDQKVIVFGHERSTATATKREGVPVVANSDGVTEAEEGLVTEYSVLLPCAVSAKLWSALSGLPAVVIAGEAEWQHLRIKNGLPFPGKELTNDYNPLEAGLWHTVHFDKGCYIGQESISRVNAYNAVKTVLYGISFEVGGQVHEGDALVAEEDGARAGVVTSLLKPEEGVETQGLAYIRTQAGGVGLKVLTKDGGVRGTVIEVPYPTR 1114
+AG+P F A+ +LVD+SH+G+I++ G DR+RF+H+Q TN F + G T F T+ R +D + D + +L+SP + +RL+E MD++IFP D+ ++++L++ AVF L GP +A L G E + +GH +S + + V + + Y++L+P A LW L+ A + GE EWQ LRI+ G P PG ELT +YNPLEAGLW +V FDKGCYIGQE+I+R+N Y VK L+GI G G+ + A ++ + G++TS++ +G + GL YIRT+AGG GL+++ G RG V+EVP+ R
Sbjct: 17 DAGIPLSFGNTSGLDAVSKDPVLVDRSHWGVIQMTGGDRLRFIHNQTTNTFTQRQSGEGCDTVFVTSTARTIDLTTVYITDDALLILTSPGQDQRLIEWMDRYIFPADRVSLTNLTQTMAVFSLVGPGSAGILKQLG--------------IEPGADLPYGHHQSVDVRSVSVRLAVGSGLG---------LPGYTLLVPAEGVAHLWQWLTETGATPV-GETEWQQLRIRQGRPAPGHELTEEYNPLEAGLWQSVSFDKGCYIGQETIARLNTYQGVKQQLWGIKLH--GSARVGEVIRAGDE--KVGLLTSVIDTPDG--SMGLGYIRTRAGGAGLEIVV--GETRGVVVEVPFLAR 343
BLAST of mRNA_H-paniculata_contig3885.10139.1 vs. uniprot
Match: A0A6H2NIY8_9CYAN (Folate-binding protein n=2 Tax=Pseudanabaenales TaxID=2881377 RepID=A0A6H2NIY8_9CYAN) HSP 1 Score: 231 bits (588), Expect = 5.250e-67 Identity = 142/360 (39.44%), Postives = 203/360 (56.39%), Query Frame = 2
Query: 44 GLPAGFRAEQVD-QALRSRALLVDKSHYGIIRVEGDDRMRFLHSQGTNAFEGAKEGAVISTCFTTNMGRVVDFCEAVVFQDEVWLLSSPHRWKRLLETMDKFIFPMDKTTVSSLSEQTAVFYLAGPQAAKALSLAGC--DNTPARGHAMEWEFEDQKVIVFGHERSTATATKREGVPVVANSDGVTEAEEGLVTEYSVLLPCAVSAKLWSALSGLPAVVIAGEAEWQHLRIKNGLPFPGKELTNDYNPLEAGLWHTVHFDKGCYIGQESISRVNAYNAVKTVLYGISFEVGGQVHEGDALVAEEDGARAGVVTSLLKPEEGVETQGLAYIRTQAGGVGLKVLTKDGGVRGTVIEVPYPTR 1114
G P F + V A + A+LVD+SH+G++++ G DR+RFLH+Q TN+F + G + T F T+ R +D A V D V LL+SP + +RL++ MD++IFP D+ T+++LS AVF L GP + L +G D GH + + ED V V A G+ + Y++L+P S +LW+ L+ A+ AGEA W LRI G P PG ELT+DYNPLEAGLWH + FDKGCYIGQE+I+R+N Y VK L+GI ++ G + ED + G +TS++ +G GL YIRT+AGG GL V T D G ++++P+ +R
Sbjct: 20 GTPTSFGNDAVALTAAHTGAVLVDRSHWGVLQLSGRDRLRFLHNQTTNSFNQRQPGEICDTVFVTSTARTIDLTTAYVTDDSVLLLTSPGQDQRLMDWMDRYIFPADQVTLTNLSSAMAVFSLLGPDSRSILENSGISIDTNLEAGHHWDAQLEDFTVRV-------------------AVGSGLA------LPGYTLLVPVDHSDRLWTKLTQAGAIA-AGEAVWTQLRIHQGRPIPGAELTDDYNPLEAGLWHAISFDKGCYIGQETIARLNTYQGVKQQLWGI--QLNENAPPGATVYVGED--KVGTLTSVVNTPDGY--LGLGYIRTKAGGAGLTV-TVDSRP-GIIVDLPFVSR 345
BLAST of mRNA_H-paniculata_contig3885.10139.1 vs. uniprot
Match: A0A6I5NNC1_9CYAN (Folate-binding protein YgfZ n=1 Tax=Leptolyngbya sp. SIO4C1 TaxID=2607770 RepID=A0A6I5NNC1_9CYAN) HSP 1 Score: 228 bits (581), Expect = 2.450e-66 Identity = 142/351 (40.46%), Postives = 190/351 (54.13%), Query Frame = 2
Query: 80 QALRSRALLVDKSHYGIIRVEGDDRMRFLHSQGTNAFEGAKEGAVISTCFTTNMGRVVDFCEAVVFQDEVWLLSSPHRWKRLLETMDKFIFPMDKTTVSSLSEQTAVFYLAGPQAAKALSLAGCDNTPARGHAMEWEFEDQKVIVFGHERSTATATKREGVPVVANSDGVTEAEEGLVTEYSVLLPCAVSAKLWSALSGLPAVVIAGEAEWQHLRIKNGLPFPGKELTNDYNPLEAGLWHTVHFDKGCYIGQESISRVNAYNAVKTVLYGISFEVGGQVHEGDALVAEEDGARAGVVTSLLKPEEGVETQGLAYIRTQAGGVGLKVLTKDGGVRGTVIEVPYPTRSDAESA 1132
QA L+D+SH+G IRV GDDRMRFLH+Q T AFE + G T F T R +D A V + V LL+SP RLLE MD++IF DK T+ +S++T F L GPQAA ALS G + P G + + D V V + T G Y+++ P + +WSAL+ I +W+ LR++ G P PG ELT + NPLEAGLWH + F+KGCYIGQE+I+R+N Y VK L+G+ ++ GD++ E G + G +TS+++ G T GL YIRT+AGG GL V G TV+EVPY +R SA
Sbjct: 6 QAAHQGLALIDRSHWGRIRVAGDDRMRFLHNQTTQAFEPLQPGQSCETVFVTATARTIDLVTAYVEAEAVLLLTSPGLAARLLEWMDRYIFFADKVTLEDISDRTFTFTLIGPQAAAALSNLGLSDLPEPGQHSKAQLADATVNV-----AAGTGLALPG--------------------YTLMGPKPQANAIWSALAD---AAILSATDWEQLRLEQGRPLPGHELTEEDNPLEAGLWHAISFEKGCYIGQETIARLNTYQGVKKQLWGL--QLSASAAAGDSITYE--GEKVGRLTSIVERPAG--TIGLGYIRTKAGGAGLSVQV--GEASATVVEVPYLSRGYLTSA 320
BLAST of mRNA_H-paniculata_contig3885.10139.1 vs. uniprot
Match: UPI0019DB0C92 (Folate-binding protein YgfZ n=1 Tax=Oscillatoriales cyanobacterium LEGE 11467 TaxID=1828826 RepID=UPI0019DB0C92) HSP 1 Score: 228 bits (582), Expect = 3.990e-66 Identity = 141/365 (38.63%), Postives = 201/365 (55.07%), Query Frame = 2
Query: 35 FEAGLPAGFRAEQVD-QALRSRALLVDKSHYGIIRVEGDDRMRFLHSQGTNAFEGAKEGAVISTCFTTNMGRVVDFCEAVVFQDEVWLLSSPHRWKRLLETMDKFIFPMDKTTVSSLSEQTAVFYLAGPQAAKALSLAGCDNTPARGHAMEWEFEDQKVIVFGHERSTATATKREGVPV-VANSDGVTEAEEGLVTEYSVLLPCAVSAKLWSALSGLPAVVIAGEAEWQHLRIKNGLPFPGKELTNDYNPLEAGLWHTVHFDKGCYIGQESISRVNAYNAVKTVLYGISF---EVGGQVHEGDALVAEEDGARAGVVTSLLKPEEGVETQGLAYIRTQAGGVGLKVLTKDGGVRGTVIEVPYPTR 1114
F+A +P F + + +A + A L D+SH+G I + GDDR RFLH+Q TN F K G T F T+ R +D A + D +WLL SP+R ++L+E D+++FPMDK V ++E T F L G ++ L+ G I E +T + V V +A +G+ A Y++ P +AK+W ++ AV + GE W+ LRI G P P ELT DYNPLEAGLW T+ F+KGCYIGQE+I+R+N Y VKT L+GI E G + LV EE + G +TS+++ ++G GLAYIRT+AGG GL+V ++ G V++VP+ TR
Sbjct: 20 FDASVPVSFGNDAIALKAAKDGAALYDRSHWGKICLWGDDRTRFLHNQSTNDFNSLKPGQTCETVFLTSTARTLDLATAYILDDAIWLLVSPNRTQKLIEWFDRYLFPMDKVDVEEIAETTNTFSLIGEKSHTILANLG--------------------ITLELEENTHQLVQLADVEVRLATGNGLATAG------YTLFCPAEDAAKVWQQIADAGAVPL-GETAWEQLRIGQGRPLPDAELTEDYNPLEAGLWQTISFEKGCYIGQETIARLNTYQGVKTQLWGIRLAAPEKPGAI----VLVGEE---KVGQLTSVVETDDGAI--GLAYIRTKAGGAGLEVKVEE--TVGKVVDVPFLTR 346
BLAST of mRNA_H-paniculata_contig3885.10139.1 vs. uniprot
Match: B4W3Q9_9CYAN (Glycine cleavage T-protein (Aminomethyl transferase) n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 TaxID=118168 RepID=B4W3Q9_9CYAN) HSP 1 Score: 228 bits (581), Expect = 6.100e-66 Identity = 136/356 (38.20%), Postives = 197/356 (55.34%), Query Frame = 2
Query: 47 LPAGFRAEQVD-QALRSRALLVDKSHYGIIRVEGDDRMRFLHSQGTNAFEGAKEGAVISTCFTTNMGRVVDFCEAVVFQDEVWLLSSPHRWKRLLETMDKFIFPMDKTTVSSLSEQTAVFYLAGPQAAKALSLAGCDNTPARGHAMEWEFEDQKVIVFGHERSTATATKREGVPVVANSDGVTEAEEGLVTEYSVLLPCAVSAKLWSALSGLPAVVIAGEAEWQHLRIKNGLPFPGKELTNDYNPLEAGLWHTVHFDKGCYIGQESISRVNAYNAVKTVLYGISFEVGGQVHEGDALVAEEDGARAGVVTSLLKPEEGVETQGLAYIRTQAGGVGLKVLTKDGGVRGTVIEVPYPT 1111
+PA F + QA R LVD SH+G++++ +DR+RFLH+Q TN F+ K G T F T+ R +D A V ++ V LL SP+R ++LLE +D++IFPMD+ ++ +S +A+F L GP++ L+ G +A + V +A G + Y++++P + +A LW L+ A + G+ WQ LRI+ G P P ELT DYNPLEAGLW+T+ FDKGCYIGQE+I+R+N Y VK L+G+ V V G + DG + G +TS E+G GLAYIRT+AGGVGL+V G + G V++VP+ T
Sbjct: 23 VPASFGNDAAALQAARQGVALVDLSHWGLLKISDEDRLRFLHNQSTNDFQKLKPGQGCDTVFVTSTARTIDLVTAYVTKEAVLLLVSPNRRQQLLEWLDRYIFPMDRVELADISNDSAIFSLIGPESDTLLTKLGVQLPIGDVYASHQHLNLNDIEVR-----------------IARGSGFA------LPGYTLIVPASNAANLWQTLTTANATPM-GDRVWQQLRIEQGRPLPDYELTEDYNPLEAGLWNTISFDKGCYIGQETIARLNTYKGVKQQLWGVRLPV--SVEPGTVITV--DGEKVGKLTSCTPTEQGYI--GLAYIRTKAGGVGLQVQV--GEIEGDVVDVPFLT 346 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3885.10139.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3885.10139.1 >prot_H-paniculata_contig3885.10139.1 ID=prot_H-paniculata_contig3885.10139.1|Name=mRNA_H-paniculata_contig3885.10139.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=378bp MRFLHSQGTNAFEGAKEGAVISTCFTTNMGRVVDFCEAVVFQDEVWLLSSback to top mRNA from alignment at H-paniculata_contig3885:987..6326- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3885.10139.1 ID=mRNA_H-paniculata_contig3885.10139.1|Name=mRNA_H-paniculata_contig3885.10139.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5340bp|location=Sequence derived from alignment at H-paniculata_contig3885:987..6326- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3885:987..6326- >mRNA_H-paniculata_contig3885.10139.1 ID=mRNA_H-paniculata_contig3885.10139.1|Name=mRNA_H-paniculata_contig3885.10139.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2268bp|location=Sequence derived from alignment at H-paniculata_contig3885:987..6326- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |