mRNA_H-paniculata_contig38770.10124.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig38770.10124.1 vs. uniprot
Match: D8LJM9_ECTSI (Brix domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJM9_ECTSI) HSP 1 Score: 243 bits (619), Expect = 2.040e-78 Identity = 116/135 (85.93%), Postives = 123/135 (91.11%), Query Frame = 1
Query: 1 PAALVLLAESFTVKQICQWASNKKFTHLFVISERLKKCNGLIVSVMPSGPTAFFKVSNVVNSGDIFNHGKVTAHQPEIILNNFNTRLGHRVGRFLGSFYPHEPEFVGRQVVTFHNQRDYIFVRFHRYIFAEGKGQ 405
P A +SFTVKQICQWA NKKFTHLFVISERLK CNGLIVSV+P GPTAFFKVSNV+ S ++FNHGKVTAHQPEIILNNFNTRLGHRVGRFLGSF+PHEPEF GRQVVTFHNQRDYIFVRFHRYIFAEGKG+
Sbjct: 119 PNAFFYPRKSFTVKQICQWADNKKFTHLFVISERLKICNGLIVSVLPHGPTAFFKVSNVIPSTEVFNHGKVTAHQPEIILNNFNTRLGHRVGRFLGSFFPHEPEFNGRQVVTFHNQRDYIFVRFHRYIFAEGKGE 253
BLAST of mRNA_H-paniculata_contig38770.10124.1 vs. uniprot
Match: A0A835YUA9_9STRA (Anticodon-binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUA9_9STRA) HSP 1 Score: 201 bits (512), Expect = 8.420e-62 Identity = 94/129 (72.87%), Postives = 109/129 (84.50%), Query Frame = 1
Query: 1 PAALVLLAESFTVKQICQWASNKKFTHLFVISERLKKCNGLIVSVMPSGPTAFFKVSNVVNSGDIFNHGKVTAHQPEIILNNFNTRLGHRVGRFLGSFYPHEPEFVGRQVVTFHNQRDYIFVRFHRYIF 387
P A +S TVKQ+CQW +NKKFTHLFV+SE+ K CNGL+V+V+P+GPTAFFKVSNV S DI N G V+ HQPE+ILNNFNTRLGHRVGRFLGS +PHEP+F GRQVVTFHNQRD+IFVR HRY+F
Sbjct: 119 PNAFFYPRKSATVKQLCQWCNNKKFTHLFVLSEKSKVCNGLLVAVLPAGPTAFFKVSNVKTSEDIHNRGTVSPHQPELILNNFNTRLGHRVGRFLGSVFPHEPDFNGRQVVTFHNQRDFIFVRHHRYVF 247
BLAST of mRNA_H-paniculata_contig38770.10124.1 vs. uniprot
Match: A0A485L3X9_9STRA (Aste57867_15808 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L3X9_9STRA) HSP 1 Score: 187 bits (474), Expect = 4.430e-56 Identity = 84/124 (67.74%), Postives = 104/124 (83.87%), Query Frame = 1
Query: 28 SFTVKQICQWASNKKFTHLFVISERLKKCNGLIVSVMPSGPTAFFKVSNVVNSGDIFNHGKVTAHQPEIILNNFNTRLGHRVGRFLGSFYPHEPEFVGRQVVTFHNQRDYIFVRFHRYIFAEGK 399
++ +K IC++A NK FTH+ ++SE+ K CNG+I+S +P GPTAFFK+SNVV I NH + T+HQPE+ILNNFNTRLGHR+GRFLGSF+ H+PEFVGRQVVTFHNQRD+IFVR HRYIF GK
Sbjct: 170 TYDIKDICRFAGNKAFTHVGILSEKEKACNGMIISRLPHGPTAFFKISNVVLMDKIVNHARKTSHQPEVILNNFNTRLGHRIGRFLGSFFEHKPEFVGRQVVTFHNQRDFIFVRQHRYIFENGK 293
BLAST of mRNA_H-paniculata_contig38770.10124.1 vs. uniprot
Match: W4GD54_9STRA (Brix domain-containing protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GD54_9STRA) HSP 1 Score: 185 bits (469), Expect = 4.410e-55 Identity = 80/124 (64.52%), Postives = 105/124 (84.68%), Query Frame = 1
Query: 28 SFTVKQICQWASNKKFTHLFVISERLKKCNGLIVSVMPSGPTAFFKVSNVVNSGDIFNHGKVTAHQPEIILNNFNTRLGHRVGRFLGSFYPHEPEFVGRQVVTFHNQRDYIFVRFHRYIFAEGK 399
++ +K IC++A NK+FTH+ ++SE+ K CNGL++S +P GPTA+FK+SNVV I NH + T+HQPE+ILNNFNTRLGHR+GRFLGSF+ H+P+FVGRQVVTFHNQRD++FVR HRY+F GK
Sbjct: 192 TYDIKDICKFAGNKEFTHVGILSEKEKTCNGLVISRLPHGPTAYFKISNVVLMDKIVNHARKTSHQPEVILNNFNTRLGHRIGRFLGSFFEHKPDFVGRQVVTFHNQRDFVFVRQHRYVFENGK 315
BLAST of mRNA_H-paniculata_contig38770.10124.1 vs. uniprot
Match: A0A4D9CX49_9STRA (Brix domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CX49_9STRA) HSP 1 Score: 184 bits (466), Expect = 5.010e-55 Identity = 87/135 (64.44%), Postives = 103/135 (76.30%), Query Frame = 1
Query: 1 PAALVLLAESFTVKQICQWASNKKFTHLFVISERLKKCNGLIVSVMPSGPTAFFKVSNVVNSGDIFNHGKVTAHQPEIILNNFNTRLGHRVGRFLGSFYPHEPEFVGRQVVTFHNQRDYIFVRFHRYIFAEGKGQ 405
P A +SF VK IC+ A FTH+F++SE+ K CNGL+VS +P GPT FFKVSNV I +HG+ TAH PE+ILNNFNTRLGHRVGRFLGSF+PH PEF GRQVVTFHNQRD++FVR HRY+F E K +
Sbjct: 120 PNAFFYPRKSFEVKAICKHAEESGFTHVFILSEKYKVCNGLLVSHLPCGPTVFFKVSNVTPGAKIAHHGQPTAHVPELILNNFNTRLGHRVGRFLGSFFPHAPEFRGRQVVTFHNQRDFLFVRHHRYVFDEKKAK 254
BLAST of mRNA_H-paniculata_contig38770.10124.1 vs. uniprot
Match: A0A024U7E5_9STRA (Brix domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U7E5_9STRA) HSP 1 Score: 184 bits (466), Expect = 6.700e-55 Identity = 82/124 (66.13%), Postives = 104/124 (83.87%), Query Frame = 1
Query: 28 SFTVKQICQWASNKKFTHLFVISERLKKCNGLIVSVMPSGPTAFFKVSNVVNSGDIFNHGKVTAHQPEIILNNFNTRLGHRVGRFLGSFYPHEPEFVGRQVVTFHNQRDYIFVRFHRYIFAEGK 399
++ +K IC++A NK+FTH+ ++SE+ K NGL++S +P GPTAFFKVSNVV I NH + T+HQPE+ILNNFNTRLGHR+GRFLGSF+ H+P+F+GRQVVTFHNQRDYIFVR HRY+F GK
Sbjct: 168 TYDIKDICKFAGNKEFTHVGILSEKEKVVNGLVISRLPHGPTAFFKVSNVVLMDKIVNHARKTSHQPEVILNNFNTRLGHRIGRFLGSFFEHKPDFIGRQVVTFHNQRDYIFVRQHRYVFENGK 291
BLAST of mRNA_H-paniculata_contig38770.10124.1 vs. uniprot
Match: A0A1V9ZXE8_9STRA (Ribosome production factor 1 (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZXE8_9STRA) HSP 1 Score: 183 bits (464), Expect = 7.860e-55 Identity = 83/125 (66.40%), Postives = 106/125 (84.80%), Query Frame = 1
Query: 25 ESFTVKQICQWASNKKFTHLFVISERLKKCNGLIVSVMPSGPTAFFKVSNVVNSGDIFNHGKVTAHQPEIILNNFNTRLGHRVGRFLGSFYPHEPEFVGRQVVTFHNQRDYIFVRFHRYIFAEGK 399
+++ +K IC++ASNK+F+H+ ++SE+ KK NG+I+S +P GPTA+FK+SNVV + I NH K T HQPE+ILNNFNTRLGHR+GRFLGSFY H+P+F GRQVVTFHNQRD+IFVR HRYIF GK
Sbjct: 159 KTYDIKDICRFASNKEFSHVCILSEKEKKVNGMIISRLPHGPTAYFKISNVVLNDKIQNHAKRTNHQPELILNNFNTRLGHRIGRFLGSFYEHKPDFKGRQVVTFHNQRDFIFVRQHRYIFESGK 283
BLAST of mRNA_H-paniculata_contig38770.10124.1 vs. uniprot
Match: A0A6G0XIW8_9STRA (Brix domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XIW8_9STRA) HSP 1 Score: 184 bits (466), Expect = 1.410e-54 Identity = 81/122 (66.39%), Postives = 104/122 (85.25%), Query Frame = 1
Query: 28 SFTVKQICQWASNKKFTHLFVISERLKKCNGLIVSVMPSGPTAFFKVSNVVNSGDIFNHGKVTAHQPEIILNNFNTRLGHRVGRFLGSFYPHEPEFVGRQVVTFHNQRDYIFVRFHRYIFAE 393
++ +K IC++A NK FTH+ ++SE+ KKCNG+++S +P GPTAFFK+SNVV I NH + T+HQPE+ILNNFNTRLGHR+GRFLGSF+ H+PEF+GRQVVTFHNQRD+IFVR HRYIF +
Sbjct: 167 TYDIKDICRFAGNKAFTHVGILSEKEKKCNGMVISRLPHGPTAFFKISNVVLMDKIENHARKTSHQPEVILNNFNTRLGHRIGRFLGSFFEHKPEFIGRQVVTFHNQRDFIFVRQHRYIFDD 288
BLAST of mRNA_H-paniculata_contig38770.10124.1 vs. uniprot
Match: K3XB40_GLOUD (Brix domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XB40_GLOUD) HSP 1 Score: 181 bits (460), Expect = 4.330e-54 Identity = 85/124 (68.55%), Postives = 104/124 (83.87%), Query Frame = 1
Query: 28 SFTVKQICQWASNKKFTHLFVISERLKKCNGLIVSVMPSGPTAFFKVSNVVNSGDIFNHGKVTAHQPEIILNNFNTRLGHRVGRFLGSFYPHEPEFVGRQVVTFHNQRDYIFVRFHRYIFAEGK 399
+F +K+I Q+A+NK+FTHL V+SE+ K CNG++VS +P GPTAFFKV+NV + DI +HGK T HQPE+ILNNF+TRLGHRVGRFLGS + HEPEF GRQVVTFHNQRD+IFVR HRY+F K
Sbjct: 160 TFDIKEIVQFATNKEFTHLIVLSEKSKVCNGMLVSRLPEGPTAFFKVTNVKLNEDIKDHGKRTNHQPELILNNFSTRLGHRVGRFLGSLFRHEPEFQGRQVVTFHNQRDFIFVRHHRYVFENEK 283
BLAST of mRNA_H-paniculata_contig38770.10124.1 vs. uniprot
Match: A0A2D4BZV3_PYTIN (Ribosome production factor 1, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BZV3_PYTIN) HSP 1 Score: 180 bits (457), Expect = 1.470e-53 Identity = 86/124 (69.35%), Postives = 103/124 (83.06%), Query Frame = 1
Query: 28 SFTVKQICQWASNKKFTHLFVISERLKKCNGLIVSVMPSGPTAFFKVSNVVNSGDIFNHGKVTAHQPEIILNNFNTRLGHRVGRFLGSFYPHEPEFVGRQVVTFHNQRDYIFVRFHRYIFAEGK 399
+F +K+I Q+ASNK+FTHL V+SE+ K+CNG+IVS +P+GPTAFFKVSNV + DI G+ T HQPE+ILNNF TRLGHRVGRFLGS + H+PEF GRQVVTFHNQRD+IFVR HRYIF K
Sbjct: 167 TFDIKEIVQFASNKEFTHLIVLSEKSKECNGMIVSRLPAGPTAFFKVSNVKLTEDIKQRGRRTDHQPELILNNFATRLGHRVGRFLGSLFRHDPEFQGRQVVTFHNQRDFIFVRHHRYIFENAK 290 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig38770.10124.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig38770.10124.1 >prot_H-paniculata_contig38770.10124.1 ID=prot_H-paniculata_contig38770.10124.1|Name=mRNA_H-paniculata_contig38770.10124.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=135bp PAALVLLAESFTVKQICQWASNKKFTHLFVISERLKKCNGLIVSVMPSGPback to top mRNA from alignment at H-paniculata_contig38770:379..1698- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig38770.10124.1 ID=mRNA_H-paniculata_contig38770.10124.1|Name=mRNA_H-paniculata_contig38770.10124.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1320bp|location=Sequence derived from alignment at H-paniculata_contig38770:379..1698- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig38770:379..1698- >mRNA_H-paniculata_contig38770.10124.1 ID=mRNA_H-paniculata_contig38770.10124.1|Name=mRNA_H-paniculata_contig38770.10124.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=810bp|location=Sequence derived from alignment at H-paniculata_contig38770:379..1698- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |