mRNA_H-paniculata_contig38572.10086.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig38572.10086.1 vs. uniprot
Match: D8LBW2_ECTSI (Signal peptide peptidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBW2_ECTSI) HSP 1 Score: 137 bits (346), Expect = 1.070e-35 Identity = 67/89 (75.28%), Postives = 78/89 (87.64%), Query Frame = 1
Query: 1 LAAQQVSGVVIRVNSPGGDALASDLMWREVRRLREAGKVVIASVAGVAASGGYYIAMGCEKIVCDEVSITGSIGVVQAKFAFGELYDKV 267
+A + + GVV+RV+SPGGDA ASDLMWREVRRLRE+GKVV+ASVA VAASGGYYIAMGCE+IVCDE+SITGSIGVV A GEL +K+
Sbjct: 501 IADKSIDGVVVRVSSPGGDASASDLMWREVRRLRESGKVVVASVADVAASGGYYIAMGCERIVCDELSITGSIGVVSALLKIGELLEKI 589
BLAST of mRNA_H-paniculata_contig38572.10086.1 vs. uniprot
Match: A0A7S0X169_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0X169_9CHLO) HSP 1 Score: 115 bits (287), Expect = 9.620e-28 Identity = 59/86 (68.60%), Postives = 70/86 (81.40%), Query Frame = 1
Query: 10 QQVSGVVIRVNSPGGDALASDLMWREVRRLREAGKVVIASVAGVAASGGYYIAMGCEKIVCDEVSITGSIGVVQAKFAFGELYDKV 267
+ V+ VV+RV+SPGGDALASDLMWREV++L E K VIAS+A VAASGGYYIAM C KIV + +++TGSIGVV KF GELY KV
Sbjct: 407 KSVAAVVLRVDSPGGDALASDLMWREVKKLAEK-KPVIASMADVAASGGYYIAMACSKIVAEPLTVTGSIGVVTGKFNLGELYAKV 491
BLAST of mRNA_H-paniculata_contig38572.10086.1 vs. uniprot
Match: A0A7C9AD89_OPUST (Peptidase_S49 domain-containing protein n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9AD89_OPUST) HSP 1 Score: 105 bits (262), Expect = 6.200e-26 Identity = 53/86 (61.63%), Postives = 69/86 (80.23%), Query Frame = 1
Query: 10 QQVSGVVIRVNSPGGDALASDLMWREVRRLREAGKVVIASVAGVAASGGYYIAMGCEKIVCDEVSITGSIGVVQAKFAFGELYDKV 267
++ VVIR++SPGGDALASDL+WRE+R L A K VIAS+A VAASGGYYIAM IV + +++TGSIGVV+ KF+ G+LY+K+
Sbjct: 82 KRYKAVVIRIDSPGGDALASDLLWREIRLLA-AEKPVIASLADVAASGGYYIAMAAGTIVAENLTLTGSIGVVKGKFSLGKLYEKI 166
BLAST of mRNA_H-paniculata_contig38572.10086.1 vs. uniprot
Match: A0A371ERT0_MUCPR (Serine protease SPPA, chloroplastic (Fragment) n=1 Tax=Mucuna pruriens TaxID=157652 RepID=A0A371ERT0_MUCPR) HSP 1 Score: 104 bits (260), Expect = 8.680e-26 Identity = 51/86 (59.30%), Postives = 68/86 (79.07%), Query Frame = 1
Query: 10 QQVSGVVIRVNSPGGDALASDLMWREVRRLREAGKVVIASVAGVAASGGYYIAMGCEKIVCDEVSITGSIGVVQAKFAFGELYDKV 267
++ +IR++SPGGDALASDLMWRE++ L A K VIAS+A VAASGGYY+AMG + IV + +++TGSIGVV KF G+LY+K+
Sbjct: 94 KKFKAAIIRIDSPGGDALASDLMWREIQLLA-ASKPVIASMADVAASGGYYMAMGADAIVAESLTLTGSIGVVTGKFNLGKLYEKI 178
BLAST of mRNA_H-paniculata_contig38572.10086.1 vs. uniprot
Match: A0A7S1TAP7_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TAP7_9RHOD) HSP 1 Score: 108 bits (269), Expect = 2.580e-25 Identity = 51/86 (59.30%), Postives = 67/86 (77.91%), Query Frame = 1
Query: 10 QQVSGVVIRVNSPGGDALASDLMWREVRRLREAGKVVIASVAGVAASGGYYIAMGCEKIVCDEVSITGSIGVVQAKFAFGELYDKV 267
+ V +++R++SPGG ALASDLMW E+R +RE K +IAS+ VAASGGYYIAM C +IVC+ +ITGS+GVV AK + GELY +V
Sbjct: 421 KDVKAIILRIDSPGGSALASDLMWGELRAVREK-KPIIASMVDVAASGGYYIAMACNRIVCERSTITGSVGVVTAKLSLGELYQRV 505
BLAST of mRNA_H-paniculata_contig38572.10086.1 vs. uniprot
Match: A0A0R0JK38_SOYBN (Peptidase_S49 domain-containing protein (Fragment) n=1 Tax=Glycine max TaxID=3847 RepID=A0A0R0JK38_SOYBN) HSP 1 Score: 105 bits (261), Expect = 3.390e-25 Identity = 51/86 (59.30%), Postives = 68/86 (79.07%), Query Frame = 1
Query: 10 QQVSGVVIRVNSPGGDALASDLMWREVRRLREAGKVVIASVAGVAASGGYYIAMGCEKIVCDEVSITGSIGVVQAKFAFGELYDKV 267
++ +IR++SPGGDALASDLMWRE+R L A K VIAS++ VAASGGYY+AMG + IV + +++TGSIGVV KF G+LY+K+
Sbjct: 58 KEFKAAIIRIDSPGGDALASDLMWREIRLLA-ASKPVIASMSDVAASGGYYMAMGADVIVAESLTLTGSIGVVTGKFNLGKLYEKI 142
BLAST of mRNA_H-paniculata_contig38572.10086.1 vs. uniprot
Match: A0A328DA81_9ASTE (Uncharacterized protein n=1 Tax=Cuscuta australis TaxID=267555 RepID=A0A328DA81_9ASTE) HSP 1 Score: 107 bits (268), Expect = 3.490e-25 Identity = 53/86 (61.63%), Postives = 69/86 (80.23%), Query Frame = 1
Query: 10 QQVSGVVIRVNSPGGDALASDLMWREVRRLREAGKVVIASVAGVAASGGYYIAMGCEKIVCDEVSITGSIGVVQAKFAFGELYDKV 267
++ VVIR++SPGGDALASDLMWRE+R L E K V+AS+A VAASGGYY+AMG + IV + +++TGSIGVV KF G+LY+K+
Sbjct: 412 KKYKAVVIRIDSPGGDALASDLMWREIRLLAET-KPVVASMADVAASGGYYMAMGAQAIVAENLTLTGSIGVVAGKFNLGKLYEKL 496
BLAST of mRNA_H-paniculata_contig38572.10086.1 vs. uniprot
Match: A0A699ZIY6_HAELA (Uncharacterized protein (Fragment) n=1 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A699ZIY6_HAELA) HSP 1 Score: 107 bits (266), Expect = 4.240e-25 Identity = 55/84 (65.48%), Postives = 67/84 (79.76%), Query Frame = 1
Query: 16 VSGVVIRVNSPGGDALASDLMWREVRRLREAGKVVIASVAGVAASGGYYIAMGCEKIVCDEVSITGSIGVVQAKFAFGELYDKV 267
V+ VV+RV+SPGGDALASDLMWRE+++L E K VIAS+A VAASGGYY++M KIV + ++ITGSIGVV KF ELY KV
Sbjct: 377 VAAVVLRVDSPGGDALASDLMWREIKKLGEK-KPVIASMADVAASGGYYLSMAAHKIVAEPLTITGSIGVVTGKFNLAELYGKV 459
BLAST of mRNA_H-paniculata_contig38572.10086.1 vs. uniprot
Match: A0A388JXK6_CHABU (Peptidase_S49 domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388JXK6_CHABU) HSP 1 Score: 102 bits (255), Expect = 4.640e-25 Identity = 52/81 (64.20%), Postives = 65/81 (80.25%), Query Frame = 1
Query: 25 VVIRVNSPGGDALASDLMWREVRRLREAGKVVIASVAGVAASGGYYIAMGCEKIVCDEVSITGSIGVVQAKFAFGELYDKV 267
VV+R++SPGGDALASDLMWRE+R L E K VIAS++ VAASGGYY+AMG IV +++++TGSIGVV AK G LY K+
Sbjct: 33 VVVRIDSPGGDALASDLMWRELRLLSEQ-KPVIASMSDVAASGGYYMAMGTNVIVAEKLTLTGSIGVVSAKINLGNLYKKI 112
BLAST of mRNA_H-paniculata_contig38572.10086.1 vs. uniprot
Match: UPI0009016EE6 (serine protease SPPA, chloroplastic n=2 Tax=Ipomoea TaxID=4119 RepID=UPI0009016EE6) HSP 1 Score: 107 bits (267), Expect = 4.790e-25 Identity = 52/86 (60.47%), Postives = 69/86 (80.23%), Query Frame = 1
Query: 10 QQVSGVVIRVNSPGGDALASDLMWREVRRLREAGKVVIASVAGVAASGGYYIAMGCEKIVCDEVSITGSIGVVQAKFAFGELYDKV 267
++ VVIR++SPGGDALASDLMWRE+R L E+ K V+AS+A VAASGGYY++MG + IV + +++TGSIGVV KF G LY+K+
Sbjct: 421 KRYKAVVIRIDSPGGDALASDLMWREIRLLAES-KPVVASMADVAASGGYYMSMGAQAIVAENLTLTGSIGVVTGKFNLGNLYEKI 505 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig38572.10086.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig38572.10086.1 >prot_H-paniculata_contig38572.10086.1 ID=prot_H-paniculata_contig38572.10086.1|Name=mRNA_H-paniculata_contig38572.10086.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=98bp LAAQQVSGVVIRVNSPGGDALASDLMWREVRRLREAGKVVIASVAGVAASback to top mRNA from alignment at H-paniculata_contig38572:124..872- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig38572.10086.1 ID=mRNA_H-paniculata_contig38572.10086.1|Name=mRNA_H-paniculata_contig38572.10086.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=749bp|location=Sequence derived from alignment at H-paniculata_contig38572:124..872- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig38572:124..872- >mRNA_H-paniculata_contig38572.10086.1 ID=mRNA_H-paniculata_contig38572.10086.1|Name=mRNA_H-paniculata_contig38572.10086.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=588bp|location=Sequence derived from alignment at H-paniculata_contig38572:124..872- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |