mRNA_H-paniculata_contig3836.10047.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3836.10047.1 vs. uniprot
Match: D8LLL8_ECTSI (Sulfotransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLL8_ECTSI) HSP 1 Score: 486 bits (1252), Expect = 5.760e-157 Identity = 233/341 (68.33%), Postives = 281/341 (82.40%), Query Frame = 2
Query: 959 ISGEGEGGKLLDNRDRCFHGSDGRHRCYPTVFFFGTSKCGTTSLARWLNEHPTIRWISNPRRPDQVELTGVKEAHVFDDSPKDTRNAMKELHHEKLYISSPVSNANDVVIDYTPHYMAVAESPHRIHDLYGSG-SGLKFVVTLREPASRTISSWQFKNEVNKLKGRREETRTLAKTVAEGIQRSSKLNACISRARVRGESLRQRDLTTCNPRKFLENPLFISHVGKSMYALQLERWFTLFGRDNFKIVFADDMAVNPVGVVEEVLEFLGQSITHEDEAKGLPDRQQWIKITGMAHNKTKAKKKEELEDQVTEKVIEDLRKFFEPYNRQLEHLLGFPVPDAW 1978
+ EGEGGKL D R+RCF G++G HRCYPTVFFFGTSKCGTTSLARWL+ HP W++NPRRP Q+E TGVKEAHVFDD PK + +HHEKL+I++P S A DVVIDYTPHY+AVAE+PHRI D+YG SGLKF+VTLREPA R ISSW+FKNE N KGRREE+R+LAKT+ +G +R+ KL+AC++ A+ + S R RDL CNPRKFLE PL++SHVGKSMYALQLERWF LFGR+NFK+VF DDMAV+PVGV+E+VL FLG +T EDE+KGLPD + W KITGMA+NKTK+KKK+EL DQVT++V E LRKFFEP+N LE +LG P+P+AW
Sbjct: 143 VVAEGEGGKLRDGRNRCFVGAEGDHRCYPTVFFFGTSKCGTTSLARWLDHHPATHWVANPRRPHQIEETGVKEAHVFDDPPKGDPAFEEGMHHEKLFITTPKSGAEDVVIDYTPHYIAVAETPHRIADIYGGRESGLKFIVTLREPAGRAISSWEFKNEYNPKKGRREESRSLAKTIEDGGRRAMKLHACLALAKSKAVSPRDRDLKLCNPRKFLEVPLYVSHVGKSMYALQLERWFDLFGRENFKVVFTDDMAVDPVGVLEDVLHFLGLELTSEDESKGLPDMKGWKKITGMAYNKTKSKKKDELGDQVTDEVKEGLRKFFEPHNEALEEILGQPLPEAW 483
BLAST of mRNA_H-paniculata_contig3836.10047.1 vs. uniprot
Match: A0A6H5JZE4_9PHAE (Sulfotransfer_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZE4_9PHAE) HSP 1 Score: 260 bits (664), Expect = 6.680e-73 Identity = 149/346 (43.06%), Postives = 208/346 (60.12%), Query Frame = 2
Query: 1004 RCF--HGSDGRHRCYPTVFFFGTSKCGTTSLARWLNEHPTIRWISNPRRPDQVELTGVKEAHVFDDSPKDTRNAMKELHHEKLY-ISSPVSNANDVVIDYTPHYMAVAESPHRIHDLYGSGS---GLKFVVTLREPASRTISSWQFKNEVNKL-KGRR----EETRTLAKTVAEGIQRSSKLNACIS--------RARVRGESLRQRDLTTCNPRKFLENPLFISHVGKSMYALQLERWFTLFGRDNFKIVFADDMAVNPVGVVEEVLEFLGQSITHEDEA-KGLPDRQQWIKITGMAHNKTKAKKKEELEDQVTEKVIEDLRKFFEPYNRQLEHLLGFPVPDAWN 1981
RCF G D RC+ V+FFG SKCGTTSLA W+ HP ++W+SN + EAHV + S +N+ E Y +++P++ D VIDYTPHY +AE P+RI D+YG S +K++ LREP +RTISSW+FK ++ + KG E R+L + +EG + + L C+S R G DL CNP FLE+ +F SHVGKS+Y+LQLERW LFGR+N K+VF ++MAV+P+G + V +FLG + E E KGL R +W +I HN T +KK+ L++QVT ++++ +R FF P+N QLE LLG P+PD W+
Sbjct: 110 RCFVLEGEDSS-RCHANVYFFGVSKCGTTSLAHWMARHPALQWVSNTCHTQHKQ---GGEAHVMEMST--IKNS------ESTYALTAPMTAQTDKVIDYTPHYSILAEVPYRIKDMYGKTSYDGTVKYIAVLREPVARTISSWEFKYDLRGIEKGEAVNPSSERRSLEEAFSEGREHALSLVKCLSDKENDLRNEIRYPGALKLNIDLQMCNPHAFLEHNMFFSHVGKSIYSLQLERWLDLFGRENVKVVFLEEMAVDPMGTIASVFDFLGVDLLDEKEGVKGLRSRTEWEEIVRTKHNLTNQRKKKILDEQVTPEILQSMRDFFAPFNTQLEELLGRPLPDNWS 443
BLAST of mRNA_H-paniculata_contig3836.10047.1 vs. uniprot
Match: D7FHD4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHD4_ECTSI) HSP 1 Score: 246 bits (629), Expect = 3.380e-66 Identity = 167/492 (33.94%), Postives = 230/492 (46.75%), Query Frame = 2
Query: 785 DGGQWGARGNQELIMRRPANNTQQQDDGGKHWYPAVANDVPTGSPEMFRKLQVLFRPRISG------EGEGGK--------------LLDNRDRCFHGSDGRHRCYPTVFFFGTSKCGTTSLARWLNEHPTIRWISNPRRPDQVELTGVKEAHVFDDSPKDTRNAMKELHHEKLYISSPVSNANDVVIDYTPHYMAVAESPHRIHDLY---GSG---SGLKFVVTLREPASRTISSWQFKNEV-----------------------------------NKLKGRR------EETRTLAKTVAEGIQRSSKLNACISRARVRGESLRQRDLTTC--------------------------NPRKFLENPLFISHVGKSMYALQLERWFTLFGRDNFKIVFADDMAVNPVGVVEEVLEFLGQSITHEDEAKGLPDRQQWIKITGMAHNKTKAKKKEELEDQVTEKVIEDLRKFFEPYNRQLEHLLGFPVPDAWN 1981
DGG G R L R AN GG + ++ +G+ ++ P+ G +G GG+ L D + RC+ G RC PTVFFFG SKCGTTSL+ WL+ HP ++ P D +EAHVFD++PK E L SP+++ D VID+TP+Y V E+P RI+D Y G G S L+F+V LREP +RTISSW++K+E ++ RR EE R L+ EG +L AC+ A G R+ +T C NPR +L L+ +HVGKS+YA+QL RWF FGR+NFK+VF DD+ P+ +EEVL+F+G + KGL + W I G N KK+ L+ QVT ++ E++R FF PYN+ LE LLG P+P +W+
Sbjct: 155 DGG--GGRDAVSLATRNGANADSIPAGGGPDYLHKPRLEIESGAADVSGPYDQFPGPQADGREKGVRDGGGGRGGAFLSSEELADETLADGKARCWTDEAGNGRCLPTVFFFGVSKCGTTSLSNWLSSHPRAVFVPPPEAHD------YREAHVFDNTPKYWHGVSDRGKRESL---SPMASWRDTVIDFTPNYAIVGEAPLRIYDYYHQAGGGRLRSNLRFLVVLREPVARTISSWEYKSEPLGPHGNGTGNSSYSSGGGAISEWPQRIGGVDIGASEDMRDRRRLDFVMEEQRPLSVAFREGAATVERLAACVRNATDSGLFGREPTVTYCRATKGRKQCNGRPPCELCNTHTEPWCNPRVYLGEVLYNAHVGKSVYAMQLRRWFNAFGRENFKVVFTDDLEEEPIKTLEEVLDFIGLDMVDPQGDKGLRSLEMWSDIVGARFNTADGAKKKVLDSQVTPEMREEMRAFFAPYNKDLEDLLGVPLPSSWH 635
BLAST of mRNA_H-paniculata_contig3836.10047.1 vs. uniprot
Match: D7G7B1_ECTSI (Sulfotransferase, C-terminal Sulfotransferase, N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7B1_ECTSI) HSP 1 Score: 201 bits (511), Expect = 1.710e-53 Identity = 122/283 (43.11%), Postives = 169/283 (59.72%), Query Frame = 2
Query: 1004 RCF--HGSDGRHRCYPTVFFFGTSKCGTTSLARWLNEHPTIRWISNPRRPDQVELTGVK---EAHVFDDSPKDTRNAMKELHHEKLY-ISSPVSNANDVVIDYTPHYMAVAESPHRIHDLYGSGS---GLKFVVTLREPASRTISSWQFKNEVNKL-KGRR----EETRTLAKTVAEGIQRSSKLNACIS------RARVR--GESLRQRDLTTCNPRKFLENPLFISHVGKSMYALQLERWFTLFGRDNFKIVFADDMAVNPVGVVEEVLEFLGQSITHEDE 1786
RCF G D RC+ V+FFG SKCGTTSLA W+ HP + W+SN V T K EAHV + S +K+ +E Y +++P++ D VIDYTPHY +AE P+RI D+YG S +K++ LREP +RTISSWQFK ++ + KG E R+L + +EG + + L C+S R ++R G DL CNP FLE+ ++ SHVGKS+Y+LQLERW LFGR+N K++F ++MAV+P+G + V +FLG + E E
Sbjct: 70 RCFVLEGEDSS-RCHANVYFFGVSKCGTTSLAHWMARHPALSWVSN------VWHTRHKQGGEAHVMEMS------TIKD--NESTYALTAPMAAQTDTVIDYTPHYSILAEVPYRIRDMYGKTSYDGTVKYIAVLREPVARTISSWQFKYDLEGIEKGEAANPSSERRSLEEAFSEGREHALSLVKCLSDKENDQRNQIRHPGALKLYIDLQMCNPHAFLEHNMYFSHVGKSIYSLQLERWLDLFGRENVKVLFLEEMAVDPMGTITSVFDFLGVDLLDEKE 337
BLAST of mRNA_H-paniculata_contig3836.10047.1 vs. uniprot
Match: D7G7A7_ECTSI (Sulfotransfer_1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7A7_ECTSI) HSP 1 Score: 182 bits (463), Expect = 1.950e-47 Identity = 111/312 (35.58%), Postives = 172/312 (55.13%), Query Frame = 2
Query: 1109 HPTIRWISNPRRPDQVELTGVKEAHVFDDSPK-DTRNAMKELHHEKLYISSPVSNANDVVIDY---TPHYMAVAESPHRIHDLYGSGS---GLKFVVTLREPASRTISSWQFKNEVNKLK------GRREETRTLAKTVAEGIQRSSKLNACISRARVRG------ESLRQRDLTTCNPRKFLENP--LFISHVGKSMYALQLERWFTLFGRDNFKIVFADDMAVNPVGVVEEVLEFLGQSITHEDEAKGLPDRQQWIKITGMAHNKTKAKKKEELEDQVTEKVIEDLRKFFEPYNRQLEHLLGFPVPDAWN 1981
HP ++W+SN +V +EAHV D+ K D + + + K ++P + +D VID TPH AE P+RI D+YG + K+++ LR+P +R ISSW K ++ L+ +TR+LA+ + +G + LN C + R E + +L C R FL + L+ +HV K MYA QLERWF L GR+N K+ F ++ A +PVG + + EF+G + E+ KGLP+R+ W + HN+T K+K L+ QVT ++++ +R FF +N +LE LLG P+PD W+
Sbjct: 4 HPALQWVSNLHMIGRV----AEEAHVLDELGKEDFQQMLGQGPTGKYGQTAPFAEESDKVIDCAADTPHCSIKAEVPYRILDIYGDAARDGSNKYLIQLRDPVARAISSWTSKFDLLSLEEGFVEGDSAGDTRSLAEAIQQGEHGMAALNDCEGKERRLAAPSWDPERQKVMELERCPMRNFLGHSQGLYWAHVAKGMYARQLERWFALVGRENIKVTFLEETAADPVGALASIFEFIGLDLLDEEGEKGLPNREAWESVVATVHNETDEKRKTILDQQVTPELLQSMRDFFASHNAELEELLGRPLPDNWS 311
BLAST of mRNA_H-paniculata_contig3836.10047.1 vs. uniprot
Match: A0A6H5L245_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L245_9PHAE) HSP 1 Score: 134 bits (337), Expect = 1.530e-31 Identity = 62/134 (46.27%), Postives = 88/134 (65.67%), Query Frame = 2
Query: 1580 CNPRKFLENPLFISHVGKSMYALQLERWFTLFGRDNFKIVFADDMAVNPVGVVEEVLEFLGQSITHEDEAKGLPDRQQWIKITGMAHNKTKAKKKEELEDQVTEKVIEDLRKFFEPYNRQLEHLLGFPVPDAWN 1981
CNPR +L L+ +HVGKS+YA+QL RWF FG +NFK+VF +D+ P+ +EEVL+F+G + KGL + + W +I G N KK+ L+ QVT ++ E++R FF PYNR LE LLG P+P +W+
Sbjct: 105 CNPRVYLGEILYNAHVGKSVYAMQLRRWFNAFGSENFKVVFTEDLEEEPIKTLEEVLDFIGLDMVDPQGDKGLRNLEMWSEIVGARFNTADGAKKKVLDSQVTPEMREEMRAFFAPYNRDLEDLLGVPLPSSWH 238
BLAST of mRNA_H-paniculata_contig3836.10047.1 vs. uniprot
Match: A0A6H5L1A9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1A9_9PHAE) HSP 1 Score: 138 bits (348), Expect = 3.140e-31 Identity = 73/155 (47.10%), Postives = 95/155 (61.29%), Query Frame = 2
Query: 986 LLDNRDRCFHGSDGRHRCYPTVFFFGTSKCGTTSLARWLNEHPTIRWISNPRRPDQVELTGVKEAHVFDDSPKDTRNAMKELHHEKLYISSPVSNANDVVIDYTPHYMAVAESPHRIHDLY---GSG---SGLKFVVTLREPASRTISSWQFKNE 1432
L D + RC+ G RC PTVFFFG SKCGTTSL+ WL+ HP ++ P D +EAHVFD++P+ E L SPV+++ D VID+TP+Y V E+P RI+D Y G G S L+F+V LREP +RTISSWQ+K+E
Sbjct: 238 LADGKARCWTDEAGNGRCLPTVFFFGVSKCGTTSLSNWLSSHPRAVFVPPPEAHD------YREAHVFDNTPRYWHGVSDRGKRESL---SPVASSRDTVIDFTPNYAIVGEAPLRIYDYYHQAGGGRLRSNLRFLVVLREPVARTISSWQYKSE 383
BLAST of mRNA_H-paniculata_contig3836.10047.1 vs. uniprot
Match: A0A7S4KR35_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4KR35_GUITH) HSP 1 Score: 114 bits (284), Expect = 6.690e-23 Identity = 96/344 (27.91%), Postives = 158/344 (45.93%), Query Frame = 2
Query: 1043 PTVFFFGTSKCGTTSLARWLNEHPTIRWISNPRRPD-QVELTGVK--------EAHVFDD----SPKDTRNAMKELHHEKLYISSPVSNANDVVIDYTPHYMAVAESPHRIHDLYGSGSGLKFVVTLREPASRTISSWQFKNEVNKLKGRREETRTLAKTVAEGIQRSSKLN---------------ACISRARV---RGESLRQ-------RDLTTCNPRKFLENP-LFISHVGKSMYALQLERWFTLFGRDNFKIVFADDMAVNPVGVVEEVLEFLGQSITHEDEAKGLPDRQQWIKITGMAHNKTKAKKKEELEDQVTEKVIEDLRKFFEPYNRQLEHLLG 1957
P G+SKCGT+S+ R+L P + S + Q E+ V E H+FD SP + A + +L S + ++ YTPHY+ +P+ + L+GS ++F+V LREP +R +SS+ FK + + E+RTLA+ ++ GIQ + + C+ A R E +++ + L C P L +P LF HVGK +Y QL RW +F ++ F + ++ + +PVG + E+L +G S ED K +Q ++ + + +E V+E L+ F+ P+N +L LLG
Sbjct: 104 PDFMLLGSSKCGTSSVIRYLLAVPEVSLASRVGMIETQEEIQDVSDEGNFDPLETHIFDQKVEFSPVELMRAQCIAYSSRLQEGQGASAS--MLAHYTPHYIYHPMTPYNLERLFGSEHNIRFLVMLREPVARAVSSYYFKVKTER------ESRTLAEAISAGIQYHTNMRHKIVSECGLDHDAEVVCLEDAEPALGREEMVQKLKEIYIDKTLPDCPP---LHDPNLFNDHVGKGVYHEQLRRWMHIFPKERFYVCTLEEFSQDPVGKLSEMLSHIGMS--EEDIRKSRSVLEQTVQKKWNVTQSSSSSADQE--------VLEQLKAFYAPHNEKLFQLLG 426
BLAST of mRNA_H-paniculata_contig3836.10047.1 vs. uniprot
Match: L1J6M3_GUITC (Sulfotransfer_1 domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J6M3_GUITC) HSP 1 Score: 110 bits (275), Expect = 1.100e-22 Identity = 84/306 (27.45%), Postives = 142/306 (46.41%), Query Frame = 2
Query: 1043 PTVFFFGTSKCGTTSLARWLNEHPTIRWISNPRRPDQVELTGVKEAHVFDDSPKDTRNAMKELHHEKLYISSPVSNANDVVIDYTPHYMAVAESPHRIHDLYGSGSGLKFVVTLREPASRTISSWQFKNEVNKLKGRREETRTLAKTVAEGIQRSSKLNACISRARVRGESLRQRDLTTCNPRKFLENP-LFISHVGKSMYALQLERWFTLFGRDNFKIVFADDMAVNPVGVVEEVLEFLGQSITHEDEAKGLPDRQQWIKITGMAHNKTKAKKKEELEDQVTEKVIEDLRKFFEPYNRQLEHLLG 1957
P G+SKCGT+S+ R+L P + S R +E T+ +++ + + ++ YTPHY+ +P+ + L+GS ++F+V LREP +R +SS+ FK + + E+RTLA+ ++ GIQ + + I + L C P L +P LF HVGK +Y QL RW +F ++ F + ++ + +PVG + E+L +G S ED K +Q ++ + + +E V+E L+ F+ P+N +L LLG
Sbjct: 37 PDFMLLGSSKCGTSSVIRYLLAVPEVSLAS---RVGMIE----------------TQEEIQDCIAYSSRLQEGQGASASMLAHYTPHYIYHPMTPYNLERLFGSEHNIRFLVMLREPVARAVSSYYFKVKTER------ESRTLAEAISAGIQYHTNMRHKIIYI--------DKTLPDCPP---LHDPNLFNDHVGKGVYHEQLRRWMHIFPKERFYVCTLEEFSQDPVGKLSEMLSHIGMS--EEDIRKSRSVLEQTVQKKWNVTQSSSSSADQE--------VLEQLKAFYAPHNEKLFQLLG 296
BLAST of mRNA_H-paniculata_contig3836.10047.1 vs. uniprot
Match: A0A835YNP6_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNP6_9STRA) HSP 1 Score: 105 bits (261), Expect = 7.590e-21 Identity = 103/339 (30.38%), Postives = 148/339 (43.66%), Query Frame = 2
Query: 1025 GRHRCYPTVFFFGTSKCGTTSLARWLNEHPTIRWISNPRRPDQVELTGVKEAHVFDDSPKDTRNAMKELHHEKLYISSPVSNANDVVIDYTPHYMAVAESPHRIHDLYGSGSGLKFVVTLREPASRTISSWQFKNE----------VNKLKGRREETRT---------LAKTVAEGIQRSSKLNACI------SRARVRGESLRQRDLTTCNPRKFLENPLFISHVGKSMYALQLERWFTLFGRDNFKIVFADDMAVNPVGVVEEVLEFLGQSITHEDEAKGLPDR----QQWIKITGMAHNKTKAKKKEELEDQVTEKVIEDLRKFFEPYNRQLEHLL 1954
G+ RC P V FFG SK GTTSLA WL++HP ++++ + L G A + + S + +A PVS DVV+DYTPHY V E P+RI L S KF+V LREPA R ISSW+FK ++ L R T L K++ G+ ++++ AC+ + A R + DL CN + E G++ Y + + +L RD+ VG E + D AK + + W + +N T+ + ELEDQVT LR+F+ P N L+ LL
Sbjct: 2 GQTRCLPNVVFFGVSKAGTTSLAHWLSQHPQVKFMGGRPSESRAYLKGRTLADIRERSKRLAPSA------------DPVS---DVVVDYTPHYAMVPEVPYRICHLLDCSS-TKFIVLLREPAERAISSWRFKERYKLKRDPEAYISALNAMRAGQPTASHHHAPELLTKSMERGMAKAAEWLACVEVEVAAAAAAGRNVTADAIDLQLCNAVRLFE--------GQAAYEVPSDGSLSL--RDH-------------VGKPER---------SGPDSAKWQANYHLSLEYWDSVLSKRYNPTR--RIPELEDQVTSYDRGALRRFYAPLNAALDDLL 290 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3836.10047.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3836.10047.1 >prot_H-paniculata_contig3836.10047.1 ID=prot_H-paniculata_contig3836.10047.1|Name=mRNA_H-paniculata_contig3836.10047.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=624bp MTWPPGRVRPAWGTRTRLSNDGGDNAWQRQRCHTVAMVVVSVAAAAVIILback to top mRNA from alignment at H-paniculata_contig3836:3335..16532- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3836.10047.1 ID=mRNA_H-paniculata_contig3836.10047.1|Name=mRNA_H-paniculata_contig3836.10047.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=13198bp|location=Sequence derived from alignment at H-paniculata_contig3836:3335..16532- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3836:3335..16532- >mRNA_H-paniculata_contig3836.10047.1 ID=mRNA_H-paniculata_contig3836.10047.1|Name=mRNA_H-paniculata_contig3836.10047.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3744bp|location=Sequence derived from alignment at H-paniculata_contig3836:3335..16532- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |