mRNA_H-paniculata_contig3832.10040.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3832.10040.1 vs. uniprot
Match: A0A6H5JU65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU65_9PHAE) HSP 1 Score: 727 bits (1877), Expect = 2.330e-228 Identity = 400/864 (46.30%), Postives = 535/864 (61.92%), Query Frame = 2
Query: 2 GTRVIFTEGELEMDSCDLRGSPADTLVVANGPPARIRNVALGVATYDGWDSRSGKSFGNNFESCEVDPCGTTATFLGGVGYGEVSSDXXXXXXXXXXXXXXXXXGESCVDGDLGVYCPCFVATVTGEEVCLGQESTVILGVPKIKPV-VGTAGTLKSNLNISAGTEGGDVVWRVHNV---FSQDGLTWETIPSIGVLEPGGNTSVSIRGQLEGARNGLTVSRFQAVSLGSGQVSFTMVNTTFYYCIEGEYYAEGTCLPCTDIPTS-EGLECVEKGVMLDSLPLVKGYWRANINTTTIRECLHEDACAGGGIVSNANDYCNRGFEGPYCAVCSAGYSRGIAHGCRRCSSHFKAVSYTLVAVAGLILLVLAWFLYEYLVQDPAVSGGRLVVNNGKNRIVTALENIPLHKLKIPIVVFQILTQYADITSVEFPEVLERFFSLLDMVNLDLGWALSATCLVNMNFYGRLLFTTLCPLILLGSLGCTYAIARNRVLRAVRLPTENGG-----ITTL---------------------GSNAFRGSNMSESRQLSVVNTKHMAVLVGLTFLLYSTVSTIVFQTFECDELEELQSAYLRADYSMYCYTAQHKSYMVYSGVMILVYPLGIPALYGWLLFTHRHRIFPKQALRDGVSPERRLTDKKIAHTRLLWEAYRPQRYWFEVVECARRLLLTGCLVFILPDTAGQATVACVLSVVSMCLFITLRPYVDNRDDRAYILGCLVIFLTMFMSLLRKVKIEKGDSQSEVGLSWLLIVLSICLMAFAVVECFLEVLPLTR------DAARTDPSANFLTTTSSTRQVMSGIGEEKLDNST--FKGFSPENGLAMNNPTSADHLYDFVTGIHNGS 2476
G V+ T GELEMD CD RGS + G + A + T G R + V G G + + + CVDG+LGVYCPCFVAT+TGEE CLG+ +T+ L P + + VG GT+ S LNI+AG EGG VVW+V V S + LTW +P++G+LE GG+ + I G L NG T + F+A S SG + MVNTTFYYC+EGEY+ + CL C+D+ EGL+C E GV+ +LP+ GYWR++ +TTTIR+CL+E+AC GG ++S ++DYC G++GPYCAVC +GY+ GI++GC C+ F+A Y L + GL+ + AW L YL+Q+P VS GR + + G +R+V+ ++ +P+HKLKIPIVVFQILTQYADIT+V+FP + +D++NLD+GW LSA+C+ + NFYGRL+ TTL P++ +L CT+ A++R +R V LP N G I T+ G+ G MSE+RQ+SVV +H+ VLV +FL+YSTVSTIVFQ F CD L+E +LRADYS+ CYT +HK Y Y+G+MILVYP+GIP LY WLLF HRHRI+PKQALRDGVSPERRL DKKIAHT LLW+AYRP RY++EV+ECARRLLLTGCLVFILP++AGQA VACVLSV ++ LFITLRP+ D+ DD YILG ++IFL+MF+SL+ K++I G V++CF +V + D+ T AN + +R+ G GE+K D+++ +K FSPE+ +P YDF G GS
Sbjct: 1119 GPYVVLTGGELEMDLCDFRGS-----IGGVGSSGAVSGSAAAIVTTSGGSHRVLS------QHRRVSSSGGVHDAKGLLLRDDSGPGRPRRVLSTASEEEGSFSNQDCVDGNLGVYCPCFVATITGEEECLGETTTLELEAPSYELLAVGIQGTISSTLNITAGREGGPVVWKVEEVAEVHSTEALTWSIVPNVGILEEGGSATAVITGSLTSDFNGPTHALFKAESRQSGNTALAMVNTTFYYCLEGEYFNDEECLLCSDLELDGEGLDCDEPGVLQSTLPVASGYWRSSADTTTIRQCLYEEACKGGTVISQSDDYCAVGYQGPYCAVCLSGYAGGISNGCHECTEAFRAGMYLLAVLGGLLAMACAWLLLRYLIQEP-VSPGRFL-SCGNSRMVSKVKELPVHKLKIPIVVFQILTQYADITTVDFPPAYTKLLGFMDVLNLDMGWVLSASCIFSPNFYGRLVLTTLVPIVFGLALCCTFMYAKSRSVR-VGLPKANEGSSIRSINTVVSXXXXXXXXXXXXAPATVFTGTRNGHGMIMSEARQMSVVKRRHVGVLVTASFLVYSTVSTIVFQAFACDTLDEQGKTFLRADYSLECYTPEHKLYRGYAGIMILVYPIGIPLLYAWLLFQHRHRIYPKQALRDGVSPERRLVDKKIAHTVLLWQAYRPSRYYYEVIECARRLLLTGCLVFILPNSAGQAGVACVLSVATVALFITLRPFADSNDDHLYILGAILIFLSMFVSLVPKLEIADGXXXXXXXXXXXXXXXXXXXXXXXVMQCFWKVRSIDAASGRRWDSGDTSSIANLMGNGGFSRRSSGGAGEDKSDDTSSGYKNFSPEDDHNTGHPAD---FYDFTNGHFGGS 1965
BLAST of mRNA_H-paniculata_contig3832.10040.1 vs. uniprot
Match: D8LRF9_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRF9_ECTSI) HSP 1 Score: 714 bits (1843), Expect = 2.390e-226 Identity = 377/736 (51.22%), Postives = 500/736 (67.93%), Query Frame = 2
Query: 389 CLGQESTVILGVPKIKPV-VGTAGTLKSNLNISAGTEGGDVVWRVH---NVFSQDGLTWETIPSIGVLEPGGNTSVSIRGQLEGARNGLTVSRFQAVSLGSGQVSFTMVNTTFYYCIEGEYYAEGTCLPCTDIPTS-EGLECVEKGVMLDSLPLVKGYWRANINTTTIRECLHEDACAGGGIVSNANDYCNRGFEGPYCAVCSAGYSRGIAHGCRRCSSHFKAVSYTLVAVAGLILLVLAWFLYEYLVQDPAVSGGRLVVNNGKNRIVTALENIPLHKLKIPIVVFQILTQYADITSVEFPEVLERFFSLLDMVNLDLGWALSATCLVNMNFYGRLLFTTLCPLILLGSLGCTYAIARNRVLRAVRLPTENGG-----ITTL----------------------GSNAFRGSNMSESRQLSVVNTKHMAVLVGLTFLLYSTVSTIVFQTFECDELEELQSAYLRADYSMYCYTAQHKSYMVYSGVMILVYPLGIPALYGWLLFTHRHRIFPKQALRDGVSPERRLTDKKIAHTRLLWEAYRPQRYWFEVVECARRLLLTGCLVFILPDTAGQATVACVLSVVSMCLFITLRPYVDNRDDRAYILGCLVIFLTMFMSLLRKVKIEKGDSQSEVGLSWLLIVLSICLMAFAVVECFLEVLPLTR------DAARTDPSANFLTTTSSTRQVMSGIGEEKLD--NSTFKGFSPENGLAMNNPTSADHLYDFVTGIHNGS 2476
CLG+ +T+ L P + + VG GT+ S LNI+AG EGG VVW+V +V + LTW +P++G+LE GG+ +V+I G L NG T + F+A S SG + MVNTTFYYC +GEY+++ CL C+D+ EGL+C E GV+ +LP+ GYWR++ +TTTIR+CL+E+AC GG +S ++DYC G++GPYCAVC +GY+ GI++GC C+ F+A Y L + GL+ L AW L+ YL+Q+P G L N +R+V+ ++ +PLHKLKIPIVVFQILTQYADIT+V+FP + +D++NLD+GW LSA+C+ + NFYGRL+ TTL P+ L +L CT+ A++R +RA LP N G + T+ GS + G MSE+RQ+SVV +H+ VLV +FL+YSTVSTIVFQTF CD L+EL + +LRADYS+ CYT +HK Y Y+G+MILVYP+GIP LY WLLF HRHRI+PKQALRDGVSPERRL DKKIAHT LLW+AYRP RY++EV+ECARRLLLTGCLVFILP++AGQA VACVLSV ++ LFITLRP+ D+ DDR YILG ++IFL+MF+SL+ K++I GD QSE +SWLLIVLS+ L A ++CFLEV + D+ T AN + +R+ G GE K D +S +K FSPE+ +P YDF GS
Sbjct: 941 CLGETTTLELEAPSYELLAVGIQGTISSTLNITAGIEGGPVVWKVEEVADVHPTEALTWSIVPNVGILEEGGSATVAITGSLTSDFNGPTQALFKAESRQSGNTALAMVNTTFYYCQQGEYFSDDECLLCSDLELDGEGLDCDEPGVLQLTLPVASGYWRSSDDTTTIRKCLYEEACEGGSAISQSDDYCAVGYQGPYCAVCLSGYAGGISNGCHECTEAFRAWMYVLAVLGGLLALACAWLLFRYLIQEPVSPGRFLSCRN--SRMVSKVKELPLHKLKIPIVVFQILTQYADITTVDFPPAFTKLLGFMDVLNLDMGWVLSASCIFSPNFYGRLVLTTLVPIALGLALCCTFMYAKSRTVRA-GLPKANEGSSMRSVNTVVSXXXXXXXXXXXXXXPATVVAGSRSGHGIMMSEARQMSVVKRRHVGVLVTASFLVYSTVSTIVFQTFACDTLDELGTTFLRADYSLECYTPEHKLYRGYAGIMILVYPIGIPLLYAWLLFRHRHRIYPKQALRDGVSPERRLVDKKIAHTVLLWQAYRPSRYYYEVIECARRLLLTGCLVFILPNSAGQAGVACVLSVATVALFITLRPFADSNDDRLYILGAILIFLSMFVSLVPKIEIADGDDQSETVVSWLLIVLSLTLWLMAFMQCFLEVRSINAASGSRWDSGDTSSIANLMGNGGFSRRSGGGAGEYKSDGTSSGYKNFSPEDHHNTGHPAD---FYDFTNAHFGGS 1670
BLAST of mRNA_H-paniculata_contig3832.10040.1 vs. uniprot
Match: A0A6H5JU27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU27_9PHAE) HSP 1 Score: 314 bits (804), Expect = 5.800e-89 Identity = 181/442 (40.95%), Postives = 263/442 (59.50%), Query Frame = 2
Query: 1058 VAVAGLILLVLAWFLYEYLVQDPAVSGGRLVVNNGKNRIVTALENIPLHKLKIPIVVFQILTQYADITSVEFPEVLERFFSLLDMVNLDLGWALSATCLVNMNFYGRLLFTTLCPLILLGSLGCTYAIARNRVLRAVRLPTENGGITTLGSNAFRGSNMSESRQ---------LSVVNTKHMAVLVGLTFLLYSTVSTIVFQTFECDELEELQSAYLRADYSMYCYTAQHKSYMVYSGVMILVYPLGIPALYGWLLFTHRHRIFPKQALRDGV--------------------SPERRLTDKKIAHTRLLWEAYRPQRYWFEVVECARRLLLTGCLVFILPDTAGQATVACVLSVVSMCLFITLRPYVDNRDDRAYILGCLVIFLTMFMSLLRKVKIEKGDSQSEVGLSWLLIVLSICLMAFAVVECFLEVLPLTRDAARTD 2296
+A+ G++L+V + LV +PA++ + + + + +P HKLKIP VV QI+TQYA ITS+EF + + F S + ++NLDLGW L++ C++++NFYG LL T+ PL+ L L TY + R P E ++FR S + S + V K+ V + + F LYSTVST++FQTF CDELE+L +YLRADY++ C + +HK++ +Y+G MILVYP+GIP + +L+ R I P + + P++RL+D++IA T LW AYRP Y++EV+EC RRLLLTGCLVFILP++AGQA VACVL+V+++ +F + PY D D RAY LG L IFLTMFM L+ + + ++QS++ LS LLI L+I L+ AV EC E ++R D
Sbjct: 5 MALTGVVLVVGVVIVLNDLVGNPALTD---LSETHFSVMSRKIRTMPFHKLKIPFVVLQIMTQYASITSIEFAPMFQTFLSTISVINLDLGWVLTSLCIIDVNFYGNLLAATVGPLMALLVLAVTYLYTCKKHRLEPR-PREADDQAIYPMSSFRTSPNTSSENDTAEPYQGVMRRVQDKYTTVALTMAFFLYSTVSTVIFQTFSCDELEDLDKSYLRADYAIDCDSDRHKAFKLYAGFMILVYPIGIPVAFAVMLWRKRSMINPPKDILSAARVLHGSNPSQHEDERYGRPSEPDQRLSDRRIAQTAFLWRAYRPAAYYYEVLECFRRLLLTGCLVFILPNSAGQAAVACVLAVLTVAVFAFVSPYSDPDDHRAYTLGALAIFLTMFMGLVVREDLADEETQSQLVLSVLLIFLTIGLVVVAVAECLWETCRVSRGQREAD 442
BLAST of mRNA_H-paniculata_contig3832.10040.1 vs. uniprot
Match: A0A835YVC3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVC3_9STRA) HSP 1 Score: 308 bits (789), Expect = 1.160e-85 Identity = 188/525 (35.81%), Postives = 286/525 (54.48%), Query Frame = 2
Query: 722 CIEGEYYAEGT------CLPCTDIPTSEGLECVEKGVMLDSLPLVKGYWRANINTTTIRECLHEDACAGGGIVSNANDYCNRGFEGPYCAVCSAGYSRGIAHGCRRCSSHFKAVSYTLVAVAGLILLVLAWFLYEYLVQDPAVSGG--RLVVNNGKNRIVTALENIPLHKLKIPIVVFQILTQYADITSVEFPEVLERFFSLLDMVNLDLGWALSATCLVNMNFYGRLLFTTLCPLILLGSL--GCTYAIARNRVLRAVRLPTENGGITTLGSNAFRGSNMSESRQLSVVNTKHMAVLVGLTFLLYSTVSTIVFQTFECDELEELQSAYLRADYSMYCYTAQHKSYMVYSGVMILVYPLGIPALYG---WLLFTHRHRIFPKQALRDGVSPERRLTDKKIAHTRLLWEAYRPQRYWFEVVECARRLLLTGCLVFILPDTAGQATVACVLSVVSMCLFITLRPYVDNRDDRAYILGCLVIFLTMFMSLLRKVKIEKGDSQSEVGLSWLLIVLSICLMAFAVVECFL 2257
C G+Y G C C S GL C G + +LPL GYWR + IR+C + DAC GG ++ +DYC G+EGPYC VCSA Y+ + + C C++ A++ + +A ++++ LAW L + + + G R+ N +R+ L + + +L++PIVV Q+LTQY IT + P F + + + +LDL W S C +N+NFY RLL TL PL ++ + G Y IAR + G T S+A L ++ ++ + G TFL+++ VS VF+TF CDEL+ + S+YLR DYS+ CYT +H +Y +++GVM+L YP+GIPALY WL F R RD T + + LWE Y+ +++EVVEC RRL+LTG LVFI+P T GQ+ VACV +V + + ++RP+ D+ D Y +G ++F++ F+SLL +V S++ VG LL+ L++ L+ A+ + L
Sbjct: 174 CGNGQYIGAGAVDGTFGCKACD----STGLACTGIGATIATLPLDSGYWRETLMQELIRKCWNSDACIGGAAAASVDDYCAAGYEGPYCTVCSADYAALVGYRCVECTTTSVAIALSAIAAIAIVVMFLAWVLVRAVGEAHTATDGSDRVEATNTSSRVARTLL-VLMRRLRVPIVVLQVLTQYVSITGGDLPLSYTHFLNGVSIFSLDLRWLTSPGCAMNVNFYDRLLMATLSPLAIIALIFAGRLYLIARAQF-----------GRTPHRSHAT----------LQLLVSEDLNAAFGFTFLIFAGVSVTVFETFACDELQYVGSSYLRVDYSIECYTPEHTAYRIFAGVMLLFYPIGIPALYMGTLWLCFVAR---------RDHGQ-----TSQLAKASLFLWEPYQANVFYWEVVECVRRLMLTGLLVFIMPGTPGQSAVACVFAVFTGIGYESMRPHRDSYDMWLYRIGYSIVFVSYFLSLLMQVSYTDEASETIVGN--LLVALNVLLLVMALGQAVL 656
BLAST of mRNA_H-paniculata_contig3832.10040.1 vs. uniprot
Match: D7FTU5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTU5_ECTSI) HSP 1 Score: 318 bits (815), Expect = 1.350e-85 Identity = 184/507 (36.29%), Postives = 287/507 (56.61%), Query Frame = 2
Query: 743 AEGTCLP-CTDIPTSEGLECVEKGVMLDSLPLVKGYWRANINTTTIRECLHEDACAGGGIVSNANDYCNRGFEGPYCAVCSAGYSRGIAHGCRRCSSHFKAVSYTLVAVAGLILLVLAWFLYEYLVQDPAVSGGRLVVNNGKNRI----VTALENIPLHKLKIPIVVFQILTQYADITSVEFPEVLERFFSLLDMVNLDLGWALSATCLVNMNFYGRLLFTTLCPLILLGSLGCTYAIARNRVLRAVRLPTENGGITTLGSNAFRGSNMSESRQLSVVNTKHMAVLVGLTFLLYSTVSTIVFQTFECDELEELQSAYLRADYSMYCYTAQHKSYMVYSGVMILVYPLGIPALYGWLLFTHRHRIFPKQALRDGVSPERRLTDKKIAHTRLLWEAYRPQRYWFEVVECARRLLLTGCLVFILPDTAGQATVACVLSVVSMCLFITLRPYVDNRDDRAYILGCLVIFLTMFMSLLRKVKIEKGDSQSEVGLSWLLIVLSICLMAFAVVE 2248
A+ LP C +P EG + +G L +L ++ GY+R++ +T IREC +EDAC GG +V +YC G+ GPYCAVC+AG+S G H C+ C + ++ +V+ G+++L+ F+ LV + + + + + +PL +KI +VV+QI+TQY+D+ VE+P + F S++D+VNLDLG+ LS C+ + +FY RLL TT+CP ++LG LGCTY + VV +H++V + + F++Y+TVS +F+TF CD L++ S YLR+DYS+ C T H +Y VY+G+MILVYP+GIP ++GW LF HRH + KQ R ERR K A LWE Y+P Y++EVVEC RR+ LTG VFI PD++ Q + +L++V M + L P+ + Y G V+F +M+++LL +V + +QS+ S +L++ ++ V++
Sbjct: 570 ADPDLLPACEAVP--EGAQTTSRGGTLATLEILPGYYRSSATSTDIRECFYEDACEGGKVVG---EYCAAGYTGPYCAVCTAGFSPGYFHSCKSCMGDSRRRAFYVVSAVGVLVLLAVVFMAAKLVSVVETTPSSKAPSRWQQKRSVWQARMKKILPLTAIKIVVVVWQIVTQYSDVAGVEYPGAYKDFLSVVDVVNLDLGFILSLACVCDTDFYDRLLLTTICPAVVLGLLGCTYLA------------------------------------MGVVKHRHLSVALFIMFVIYATVSYTIFETFVCDPLDDGNS-YLRSDYSLTCDTETHTAYRVYAGLMILVYPVGIPCVFGWWLFKHRHEL--KQEGR-----ERRAVLKPAAD---LWEPYKPSTYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAIVFMVVSEFLSPFARPVEMWLYRTGHYVVFASMYLALLLRVDVSDERNQSQEVFSGVLVIAHAAMLLVVVLQ 1024
BLAST of mRNA_H-paniculata_contig3832.10040.1 vs. uniprot
Match: A0A6H5JWI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI3_9PHAE) HSP 1 Score: 312 bits (799), Expect = 2.850e-85 Identity = 195/576 (33.85%), Postives = 308/576 (53.47%), Query Frame = 2
Query: 668 SLG-SGQVSFTMVNTTFYYCIEGEYYAE---------GTC----------LPCTDIPTS----------------EGLECV-EKGVMLDSLPLVKGYWRANINTTTIRECLHEDACAGGGIVSNANDYCNRGFEGPYCAVCSAGYSRGIAHGCRRC------SSHFKAVSYTLVAVAGLILLVLAWF-LYEYLVQDPAVSGGRLVVNNGKNRIVTALENIPLHKLKIPIVVFQILTQYADITSVEFPEVLERFFSLLDMVNLDLGWALSATCLVNMNFYGRLLFTTLCPLILLGSLGCTYAIARNRVLRAVRLPTENGGITTLGSNAFRGSNMSESRQLSVVNTKHMAVLVGLTFLLYSTVSTIVFQTFECDELEELQSAYLRADYSMYCYTAQHKSYMVYSGVMILVYPLGIPALYGWLLFTHRHRIFPKQALRDGVSPERRLTDKKIAHTRLLWEAYRPQRYWFEVVECARRLLLTGCLVFILPDTAGQATVACVLSVVSMCLFITLRPYVDNRDDRAYILGCLVIFLTMFMSLLRKVKIEKGDSQSEVGLSWLLIVLSICLMAFAVVECFLEV 2263
SLG +G ++ T + YYC G+Y E GTC C D P S G++ + GV L L L++GY+R + + + +C E+AC GG VS YC G+ G YCAVC GY+ G C C S+ +V+ VA+ G+ L++ + + + D A + G+ + + ++RIV A +PL +KI +V +QI+TQ++ + +V +P++ E F ++L++VN DLG+ LS +C+V++NFYGRL FTT+ PL++ G L TYAI+R+R N + +KH+++ + ++F++YS+VS +FQTF C+ L++ YLRADYS+ C T H + M Y+G+MILVYP+GIP +Y W L ++RH + + + RL + R LW +Y+P+RY+FEV+EC RR+ LTG F+LPD+A Q + VL+ + M + L P+ D D Y G +IF +M+++LL KV DSQS+ + +LI + ++ +V+ L V
Sbjct: 523 SLGIAGNITDTTFESNTYYCSSGQYGYEYEIGEDEVSGTCRFGVVCSSCAASCEDNPGSVVVVNDAHVPICETAMTGVDTSGDGGVTLPELNLLRGYYRTSAESQNVLKCYQEEACIGGTDVSQ---YCQEGYRGAYCAVCDEGYASGYQFSCSICDGENLRSAIGTSVALFFVALVGIALVIADLVRVVDEVEPDTASTWGKRLTSC-RDRIVKA---VPLTSIKIVVVAWQIVTQFSSVVNVVYPDIYESFLAVLNVVNFDLGFLLSVSCIVDVNFYGRLFFTTVGPLVVFGGLAATYAISRSR-------------------------NRHSPAGMQAAKSKHLSIALFISFVVYSSVSFNIFQTFVCETLDD-GVTYLRADYSLTCSTGVHTAMMAYAGLMILVYPVGIPTVYSWWLLSNRHDLVKVGTSGNCLGGAPRLDH--LQPMRDLWSSYKPRRYYFEVLECGRRIALTGLAAFLLPDSAAQVAIEVVLAAIFMAVSDVLSPFADPFDGWLYRTGAWIIFFSMYLALLLKVDASDEDSQSQAAFAKVLIAAHVGMVLVVLVQAVLSV 1063
BLAST of mRNA_H-paniculata_contig3832.10040.1 vs. uniprot
Match: A0A6H5L324_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L324_9PHAE) HSP 1 Score: 313 bits (801), Expect = 8.860e-84 Identity = 179/498 (35.94%), Postives = 275/498 (55.22%), Query Frame = 2
Query: 785 EGLECVEKGVMLDSLPLVKGYWRANINTTTIRECLHEDACAGGGIVSNANDYCNRGFEGPYCAVCSAGYSRGIAHGCRRCSSHFKAVSYTLVAVAGLILLVLAWFLYEYLVQDPAVSGGRLVV-----NNGKNRIVTALE-----NIPLHKLKIPIVVFQILTQYADITSVEFPEVLERFFSLLDMVNLDLGWALSATCLVNMNFYGRLLFTTLCPLILLGSLGCTYAIARNRVLRAVRLPTENGGITTLGSNAFRGSNMSESRQLSVVNTKHMAVLVGLTFLLYSTVSTIVFQTFECDELEELQSAYLRADYSMYCYTAQHKSYMVYSGVMILVYPLGIPALYGWLLFTHRHRIFPKQALRDGVSPERRLTDKKIAHTRLLWEAYRPQRYWFEVVECARRLLLTGCLVFILPDTAGQATVACVLSVVSMCLFITLRPYVDNRDDRAYILGCLVIFLTMFMSLLRKVKIEKGDSQSEVGLSWLLIVLSICLMAFAVVE 2248
EG +G L +L ++ G++R++ +T IREC H+ AC GG + YC+ G+ GPYCAVC+AGYS G + C+ C + K + A GL+ L L LV V + + G R +AL+ +PL +KI +VV+QI+TQY+D+ +E+P + F S++D+VNLDLG+ LS C+ + NFY RLL T+ P+++LG LGCTY +AR R N + V +H++V + + F++Y+ VS +F+TF CD L++ S YLRADYS+ C T H +Y VY+G+ +LVYP+GIP ++GW LF +RH + KQ R+G + R D LWE Y+P Y++EVVEC RR+ LTG VFI PD++ Q + +L+ V M + L P+ + Y G V+F +M+++LL +V + QS+ S ++++ + + VV+
Sbjct: 553 EGSRTTRRGATLATLEVLPGFYRSSETSTDIRECFHKKACDGGSAIGT---YCSEGYIGPYCAVCAAGYSPGYSRTCKSCMGNSKKSALVFAAAIGLLALAAVMVLVSRLVSVVEVGPRQQXXXXXXGSKGWRRTCSALQARVRQTVPLTAVKIVVVVWQIVTQYSDVAGIEYPGAYQDFLSVVDVVNLDLGFILSFACVYDTNFYDRLLMATIGPVLVLGLLGCTYVVARRR-------------------------NRHCEEAMRDVQRRHLSVTLFVMFVIYAAVSYTIFETFVCDTLDDGNS-YLRADYSLTCDTPLHTAYRVYAGLAVLVYPVGIPCIFGWWLFKNRHEL--KQEDREGQAELRPAAD--------LWEPYKPSAYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAAVFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDERDQSQEVFSGVIVMAHVAMFLVVVVQ 1011
BLAST of mRNA_H-paniculata_contig3832.10040.1 vs. uniprot
Match: A0A835YUM0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUM0_9STRA) HSP 1 Score: 310 bits (793), Expect = 1.330e-83 Identity = 184/524 (35.11%), Postives = 281/524 (53.63%), Query Frame = 2
Query: 722 CIEGEYYAEGTCLPCTDIPTSEGLECVEKGVMLDSLPLVKGYWRANINTTTIRECLHEDACAGGGIVSNANDYCNRGFEGPYCAVCSAGYSRGIAHGCRRCSSHFKAVSYTL------VAVAGLILLVLAWFLYEYLVQ--DPAVSGGRLVVNNGKNRIVTALENIPLHKLKIPIVVFQILTQYADITSVEFPEVLERFFSLLDMVNLDLGWALSATCLVNMNFYGRLLFTTLCPLILLGSLGCTYAIARNRVLRAVRLPTENGGITTLGSNAFRGSNMSESRQLSV------------VNTKHMAVLVGLTFLLYSTVSTIVFQTFECDELEELQSAYLRADYSMYCYTAQHKSYMVYSGVMILVYPLGIPALYGWLLFTHRHRIFPKQALRDGVSPERRLTDKKIAHTRLLWEAYRPQRYWFEVVECARRLLLTGCLVFILPDTAGQATVACVLSVVSMCLFITLRPYVDNRDDRAYILGCLVIFLTMFMSLLRKVKIEKGDSQSEVGLSWLLIVLSICLMA 2233
C+ G++ + C+ C + +C + GV +LPL G WR N+ +R+C +AC GG + +DYC G+ GPYCAVC+A ++R + C C S A + ++ A G+ + + + L++ D A G V A + L L+IPIVV Q+LTQ+A +T FP++ F L++ +LDL LSA C V +FY RLLF T+ PL+ + +LG + R R R +G S SR L+ + ++H +L+ TFL++S ST VFQTF CD L+ YLRADY++ C TA+H++Y++Y+ M+LVYP+GIPALY ++L HR I + DG + + T+ LW Y+ Y++E++ECARRLLL+G LVFI P T Q+ VAC L+++++ ++ L P+ D+ D R Y+LG ++IF +MF +LL + D +S +S LLI LS+ L+A
Sbjct: 734 CLAGDFIKDDQCVYCDP----QLFDCSQIGVSAKALPLRPGLWRENLTQANVRQCWRAEACHGGSATDSPDDYCAEGYSGPYCAVCAADHTRTFGNKCVACDSGQAAAAISVFVILICAAAVGISYIAITSLRLDALIEVMDSATED-----QTGLLASVAAALGLALSHLRIPIVVVQVLTQFASVTGAPFPQLYRGFLRWLNLFSLDLSLFLSAGCYVRTDFYDRLLFVTIAPLVCVAALGAFHLFVCRRHQR--RTGGLDGXXXXXXXXXXXXXXTSSSRSLAQWRSARARERLDDIVSRHATLLLAFTFLIFSFASTTVFQTFACDCLDGTGECYLRADYALSCGTARHRAYVIYASFMVLVYPVGIPALYAYMLRRHRKGIARHE---DGG-----VVAASLKPTKFLWTPYKKTVYFWELIECARRLLLSGFLVFIFPGTPAQSAVACTLALITIVVYGELAPHKDSTDHRVYVLGSIIIFFSMFSALLVQGDYVAQDDRSAQVISVLLIALSVLLLA 1238
BLAST of mRNA_H-paniculata_contig3832.10040.1 vs. uniprot
Match: A0A836CF41_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF41_9STRA) HSP 1 Score: 308 bits (789), Expect = 3.490e-83 Identity = 188/525 (35.81%), Postives = 286/525 (54.48%), Query Frame = 2
Query: 722 CIEGEYYAEGT------CLPCTDIPTSEGLECVEKGVMLDSLPLVKGYWRANINTTTIRECLHEDACAGGGIVSNANDYCNRGFEGPYCAVCSAGYSRGIAHGCRRCSSHFKAVSYTLVAVAGLILLVLAWFLYEYLVQDPAVSGG--RLVVNNGKNRIVTALENIPLHKLKIPIVVFQILTQYADITSVEFPEVLERFFSLLDMVNLDLGWALSATCLVNMNFYGRLLFTTLCPLILLGSL--GCTYAIARNRVLRAVRLPTENGGITTLGSNAFRGSNMSESRQLSVVNTKHMAVLVGLTFLLYSTVSTIVFQTFECDELEELQSAYLRADYSMYCYTAQHKSYMVYSGVMILVYPLGIPALYG---WLLFTHRHRIFPKQALRDGVSPERRLTDKKIAHTRLLWEAYRPQRYWFEVVECARRLLLTGCLVFILPDTAGQATVACVLSVVSMCLFITLRPYVDNRDDRAYILGCLVIFLTMFMSLLRKVKIEKGDSQSEVGLSWLLIVLSICLMAFAVVECFL 2257
C G+Y G C C S GL C G + +LPL GYWR + IR+C + DAC GG ++ +DYC G+EGPYC VCSA Y+ + + C C++ A++ + +A ++++ LAW L + + + G R+ N +R+ L + + +L++PIVV Q+LTQY IT + P F + + + +LDL W S C +N+NFY RLL TL PL ++ + G Y IAR + G T S+A L ++ ++ + G TFL+++ VS VF+TF CDEL+ + S+YLR DYS+ CYT +H +Y +++GVM+L YP+GIPALY WL F R RD T + + LWE Y+ +++EVVEC RRL+LTG LVFI+P T GQ+ VACV +V + + ++RP+ D+ D Y +G ++F++ F+SLL +V S++ VG LL+ L++ L+ A+ + L
Sbjct: 761 CGNGQYIGAGAVDGTFRCKACD----STGLACTGIGATIATLPLDSGYWRETLMQELIRKCWNSDACIGGAAAASVDDYCAAGYEGPYCTVCSADYAALVGYRCVECTTTSVAIALSAIAAIAIVVMFLAWVLVRAVGEAHTATDGSDRVEATNTSSRVARTLL-VLMRRLRVPIVVLQVLTQYVSITGGDLPLSYTHFLNGVSIFSLDLRWLTSPGCAMNVNFYDRLLMATLSPLAIIALIFAGRLYLIARAQF-----------GRTPHRSHAT----------LQLLVSEDLNAAFGFTFLIFAGVSVTVFETFACDELQYVGSSYLRVDYSIECYTPEHTAYRIFAGVMLLFYPIGIPALYMGTLWLCFVAR---------RDHGQ-----TSQLAKASLFLWEPYQANVFYWEVVECVRRLMLTGLLVFIMPGTPGQSAVACVFAVFTGIGYESMRPHRDSYDMWLYRIGYSIVFVSYFLSLLMQVSYTDEASETIVGN--LLVALNVLLLVMALGQAVL 1243
BLAST of mRNA_H-paniculata_contig3832.10040.1 vs. uniprot
Match: D7FTT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTT9_ECTSI) HSP 1 Score: 311 bits (796), Expect = 3.830e-83 Identity = 180/500 (36.00%), Postives = 272/500 (54.40%), Query Frame = 2
Query: 764 CTDIPTSEGLECVEKGVMLDSLPLVKGYWRANINTTTIRECLHEDACAGGGIVSNANDYCNRGFEGPYCAVCSAGYSRGIAHGCRRCSSHFKAVSYTLVAVAGLILLVLAWFLYEYLVQDPAVSGGRLVVNNGKNRIVTALE-----NIPLHKLKIPIVVFQILTQYADITSVEFPEVLERFFSLLDMVNLDLGWALSATCLVNMNFYGRLLFTTLCPLILLGSLGCTYAIARNRVLRAVRLPTENGGITTLGSNAFRGSNMSESRQLSVVNTKHMAVLVGLTFLLYSTVSTIVFQTFECDELEELQSAYLRADYSMYCYTAQHKSYMVYSGVMILVYPLGIPALYGWLLFTHRHRIFPKQALRDGVSPERRLTDKKIAHTRLLWEAYRPQRYWFEVVECARRLLLTGCLVFILPDTAGQATVACVLSVVSMCLFITLRPYVDNRDDRAYILGCLVIFLTMFMSLLRKVKIEKGDSQSEVGLSWLLIVLSICLMAFAVVE 2248
C + P EG +G L +L ++ G++R++ +T IREC H+ AC GG V YC G+ GPYCAVCSAGYS G + C+ C K + A G + L L LV V + + G R +A + +PL +KI +VV+QI+TQY+D+ VE+P + F S++D+VNLDLG+ LS C+ + NFY RLL T+ P+++LG LGCTY +AR R N + V +H++V + + F++Y+ VS +F+TF CD L++ S YLRADYS+ C T H +Y VY+G+ +LVYP+GIP ++GW LF +RH + KQ R+ + R D LWE Y+P Y++EVVEC RR+ LTG VFI PD++ Q + +L+ V M + L P+ + Y G V+F +M+++LL +V + QS+ S ++++ + + V +
Sbjct: 572 CEEAP--EGSRTTRRGATLATLEILPGFYRSSETSTDIRECFHKQACEGGSAVGT---YCAEGYIGPYCAVCSAGYSPGYSRTCKSCMGDSKKSALVFAAAIGALALAAVVALVSRLVSVVEVGPPQQQGSKGWRRTCSAWQARVRQTVPLTAVKIVVVVWQIVTQYSDVAGVEYPGAYQDFLSVVDVVNLDLGFILSFACVYDTNFYDRLLMATIGPVLVLGLLGCTYLVARRR-------------------------NRHCEEAMRDVQRRHLSVTLFVMFVIYAAVSYTIFETFVCDTLDDGNS-YLRADYSLTCDTPLHTAYRVYAGLAVLVYPVGIPCVFGWWLFKNRHEL--KQEDRESQAELRPAAD--------LWEPYKPSAYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAAVFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDERDQSQEVFSGVIVIAHVAMFLVVVAQ 1030 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3832.10040.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3832.10040.1 >prot_H-paniculata_contig3832.10040.1 ID=prot_H-paniculata_contig3832.10040.1|Name=mRNA_H-paniculata_contig3832.10040.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1138bp MDSCDLRGSPADTLVVANGPPARIRNVALGVATYDGWDSRSGKSFGNNFEback to top mRNA from alignment at H-paniculata_contig3832:1122..15985+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3832.10040.1 ID=mRNA_H-paniculata_contig3832.10040.1|Name=mRNA_H-paniculata_contig3832.10040.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=14864bp|location=Sequence derived from alignment at H-paniculata_contig3832:1122..15985+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3832:1122..15985+ >mRNA_H-paniculata_contig3832.10040.1 ID=mRNA_H-paniculata_contig3832.10040.1|Name=mRNA_H-paniculata_contig3832.10040.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=6828bp|location=Sequence derived from alignment at H-paniculata_contig3832:1122..15985+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |