mRNA_H-paniculata_contig383.10034.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig383.10034.1
Unique NamemRNA_H-paniculata_contig383.10034.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig383.10034.1 vs. uniprot
Match: A0A7S4DCU9_HETAK (Phospholipid-transporting ATPase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DCU9_HETAK)

HSP 1 Score: 322 bits (824), Expect = 2.770e-100
Identity = 176/353 (49.86%), Postives = 238/353 (67.42%), Query Frame = 3
Query:   72 LPRGLVIDGPALLEALQTPESQCALLRAAQACHCVVGCRMSPDQKRALVSLVRENVPGTRTLSIGDGANDVPMIQTAHIGVGISGQEGMQAVNASDYAISQFAYLRKLLLVHGRWNYRRSSRVVCYLFYKSIMFAGPLVFYASFNGFSGTLFYDYVTTNLYAVVYTALPILLYGTYDQDISARTCLRRFPQLYAYGIQDGYMRPKIFWSWMLQALLESSFITVMPLILLSGDRNQMGVVTSTYEYGTTTFALVVITVSLKMFWVQCRWTPIHILALLGSVLAYFLSAFVVNTSVVLNWDYHGVLDSLVQSGLYWAVSVWCLVVVIGRDWAWKFHHRWWNPRLHHLVIESEHAD 1130
            LPR LVIDGP+L+ A+   E +  LL   + C  VV CR+SPDQKR +V+LV++NVPG R L+IGDGANDV MIQ AH+GVGISGQEG+QAVN+SDYA++QF YLRKLLLVHGRWNYRR S++VCY+FYK+I+ + P+ ++A   GF G  FY  V    Y + YT+LPI+L G YD+DISA   LR FP LY  GI+D Y   KIFW WM  A+ E++ + V+PL L SG+        S +E G TTF  VVI V+LK+ + Q  W  IH+  +L S   +F+  ++ N  VV+++D +   D  ++S  YW + +   ++ I RD  WK ++RW++P  HH+V E +  D
Sbjct:  184 LPRCLVIDGPSLIPAMSD-EVRPELLALGRLCRAVVACRVSPDQKREMVALVKDNVPGVRALAIGDGANDVAMIQEAHVGVGISGQEGLQAVNSSDYAVAQFKYLRKLLLVHGRWNYRRMSKLVCYVFYKNILMSLPMFWFAFAAGFGGQKFYVEVGIQFYNLFYTSLPIILIGIYDRDISADLALR-FPSLYFVGIKDTYFTVKIFWVWMASAIWEAATVCVLPLFL-SGNSFD-----SFWESGATTFTAVVIMVNLKLIFHQFAWYWIHLFIVLLSCALWFMLGWISNRLVVVDYDAYYTFDKDLKSHTYWLLVMLLCMIGIMRDLYWKGYNRWFHPSPHHIVEEIDAYD 528          
BLAST of mRNA_H-paniculata_contig383.10034.1 vs. uniprot
Match: A0A6H5KPG5_9PHAE (P-type phospholipid transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPG5_9PHAE)

HSP 1 Score: 327 bits (837), Expect = 2.520e-95
Identity = 172/348 (49.43%), Postives = 230/348 (66.09%), Query Frame = 3
Query:   78 RGLVIDGPALLEALQTPESQCALLRAAQACHCVVGCRMSPDQKRALVSLVRENVPGTRTLSIGDGANDVPMIQTAHIGVGISGQEGMQAVNASDYAISQFAYLRKLLLVHGRWNYRRSSRVVCYLFYKSIMFAGPLVFYASFNGFSGTLFYDYVTTNLYAVVYTALPILLYGTYDQDISARTCLRRFPQLYAYGIQDGYMRPKIFWSWMLQALLESSFITVMPLILLSGDRNQMGVVTSTYEYGTTTFALVVITVSLKMFWVQCRWTPIHILALLGSVLAYFLSAFVVNTSVVLNWDYHGVLDSLVQSGLYWAVSVWCLVVVIGRDWAWKFHHRWWNPRLHHLVIESE 1121
            R L++DG AL  A+  P         A  C  VV CR+SPDQKRA+V+LVRE  P  RTL+IGDGANDV MIQ AHIGVGISGQEGMQAVNASD+AI+QF +L+KL+L HGR NYRR S++V Y FYK+I+ A P+ +Y   NG+SG  FY       Y +++T  PIL  G +D+D+S +     FPQLY  GI D +   K+FWSW+ QA++E++ IT +PL+LL G     G   S   YG TTF+LVV+  + K+ W+Q RWT    + ++ SVLA+F +A V+N    +++D+  V   L+ +  +WAV   C   V  RD +WKF+HRWW P+LHHL++E E
Sbjct:  969 RALIVDGQALSLAMD-PACSKYFAELAMECEAVVCCRVSPDQKRAVVALVRERRPEARTLAIGDGANDVAMIQAAHIGVGISGQEGMQAVNASDFAIAQFRFLQKLMLFHGRQNYRRMSKLVAYTFYKNILMAVPMAWYVVANGYSGQKFYTEGGIQFYNIMFTLWPILFLGCFDRDVSLKDT-EDFPQLYVLGINDVFFNAKVFWSWISQAMVEAALITFVPLLLLKGGPGDDGTEVSYMLYGGTTFSLVVLLANSKILWLQYRWTWWAAVLVVASVLAWFGTACVLNILHKVDFDFFMVFFHLIVNPTFWAVVTLCFTAVAMRDLSWKFYHRWWQPKLHHLILEVE 1314          
BLAST of mRNA_H-paniculata_contig383.10034.1 vs. uniprot
Match: D7FU18_ECTSI (Phospholipid-transporting ATPase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU18_ECTSI)

HSP 1 Score: 288 bits (738), Expect = 3.730e-82
Identity = 174/440 (39.55%), Postives = 230/440 (52.27%), Query Frame = 3
Query:   78 RGLVIDGPALLEALQTPESQCALLRAAQACHCVVGCRMSPDQKRALVSLVRENVPGTRTLSIGDGANDVPMIQTAHIGVGISGQEGMQ--------------------------------------------------------------------------------------------AVNASDYAISQFAYLRKLLLVHGRWNYRRSSRVVCYLFYKSIMFAGPLVFYASFNGFSGTLFYDYVTTNLYAVVYTALPILLYGTYDQDISARTCLRRFPQLYAYGIQDGYMRPKIFWSWMLQALLESSFITVMPLILLSGDRNQMGVVTSTYEYGTTTFALVVITVSLKMFWVQCRWTPIHILALLGSVLAYFLSAFVVNTSVVLNWDYHGVLDSLVQSGLYWAVSVWCLVVVIGRDWAWKFHHRWWNPRLHHLVIESE 1121
            R L+IDG AL  A+  P         A  C  VV CR+SPDQKRA+V+LVRE  P  RTL+IGDGANDV MIQ AHIGVGISGQEGMQ                                                                                            AVNASD+AI+QF +L+KL+L HGR NYRR S++V Y FYK+I+ A P+ +Y   NG+SG  FY       Y +++T  PIL  G +D+D+S +     FPQLY  GI D +   K+FWSWM QA++E++ IT +PL+LL G     G   S   YG TTF+LVV+  + K+ W+Q RWT    + ++ SVLA+F +A V+N    +++D+  V   L+ +  +WAV   C   V  RD +WKF+HRWW P+LHHL++E E
Sbjct: 1015 RALIIDGQALSLAMD-PACSKYFAELAMECEAVVCCRVSPDQKRAVVALVRERRPEARTLAIGDGANDVAMIQAAHIGVGISGQEGMQSVGAQFKNQLNSLLGAIGETHPHYVRCLKPNDENVRSQFDLGRITAQLANGAVAAKARREAALRDKRCRQRGGGIYGRHRPVCCRTLLYVPLAVNASDFAIAQFRFLQKLMLFHGRQNYRRMSKLVAYTFYKNILMAVPMAWYMVVNGYSGQKFYTEGGIQFYNIMFTLWPILFLGCFDRDVSLKDT-ENFPQLYVLGINDVFFNAKVFWSWMSQAIVEAALITFVPLLLLKGGPADDGAEVSYMFYGGTTFSLVVLLANSKILWLQYRWTWWAAVLVMASVLAWFGTACVLNILHKVDFDFFMVFFHLMVNPTFWAVVTLCFTAVAMRDLSWKFYHRWWQPKLHHLILEVE 1452          
BLAST of mRNA_H-paniculata_contig383.10034.1 vs. uniprot
Match: A0A7S3HLE4_9STRA (Phospholipid-transporting ATPase n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HLE4_9STRA)

HSP 1 Score: 259 bits (661), Expect = 2.510e-72
Identity = 133/327 (40.67%), Postives = 208/327 (63.61%), Query Frame = 3
Query:   75 PRGLVIDGPALLEALQTPESQCALLRAAQACHCVVGCRMSPDQKRALVSLVRENVPGTRTLSIGDGANDVPMIQTAHIGVGISGQEGMQAVNASDYAISQFAYLRKLLLVHGRWNYRRSSRVVCYLFYKSIMFAGPLVFYASFNGFSGTLFYDYVTTNLYAVVYTALPILLYGTYDQDISARTCLRRFPQLYAYGIQDGYMRPKIFWSWMLQALLESSFITVMPLILLSGDRNQMGVVTSTYEYGTTTFALVVITVSLKMFWVQCRWTPIHILALLGSVLAYFLSAFVVNTSVVLNWDYHGVLDSLVQSGLYWAVSVWCLVVVIGRD 1055
            PR L+IDGP+L+  +   +++  LLR +Q C  VV CR+SPDQKR +V LV++ VP  RTL++GDGANDV MI  AHIGVGI G+EG+QAVN+SDY+I+QF YL  LLL HGR+NY R S +V + FYK+I  +  + ++     FSG   Y       + + YT++PILLY TYD+D++    LR FPQLY+ GI++ +   ++FW W++   LES  + ++    L G   + G++ S  E G+  F +++I ++LKM  +QC W    ++ +L S  ++    ++V+ +  +++DYH     L+Q+G +W   +  +V++  +D
Sbjct:  772 PRALIIDGPSLIFVMSDEDTKDMLLRFSQTCKAVVCCRVSPDQKREIVMLVKKGVPEVRTLAVGDGANDVAMITAAHIGVGIRGEEGVQAVNSSDYSIAQFRYLSPLLLKHGRYNYIRMSNLVNFTFYKNINMSMTMFWFNFLCFFSGEKMYTEGAIQFFNLFYTSIPILLYATYDKDVAISDALR-FPQLYSAGIKNEFFNTRVFWGWVIDGFLESIIVCILSFYFLRGFDYRTGMLASYLEAGSLCFTVLIILINLKMLKIQCEWYLTSVVVILLSFGSWIGVGYIVSATTSIDYDYHFTWSRLLQTGTFWLALLLLVVMISIKD 1097          
BLAST of mRNA_H-paniculata_contig383.10034.1 vs. uniprot
Match: A0A1V9ZVV3_9STRA (P-type phospholipid transporter n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZVV3_9STRA)

HSP 1 Score: 255 bits (652), Expect = 1.060e-70
Identity = 151/356 (42.42%), Postives = 213/356 (59.83%), Query Frame = 3
Query:   84 LVIDGPALLEALQTPESQCALLRAAQACHCVVGCRMSPDQKRALVSLVRENVPGTRTLSIGDGANDVPMIQTAHIGVGISGQEGMQAVNASDYAISQFAYLRKLLLVHGRWNYRRSSRVVCYLFYKSIMFAGPLVFYASFNGFSGTLFYDYVTTNLYAVVYTALPILLYGTYDQDISARTCLRRFPQLYAYGIQDGYMRPKIFWSWMLQALLESSFITVMPLILLSGDRNQMGVVTSTYEYGTTTFALVVITVSLKMFWVQCRWTPIHILALLGSVLAYFLSAFVVNT------SVVLNWDYHGVLDSLVQSGLYWAVSVWCLVVVIGRDWAWKFHHRWWNPRLHHLVIESEHADQ 1133
            L+IDG AL  AL+ P ++  L+  AQ C  V+ CR+SP QK  +V L+REN+P  RTL+IGDGANDV MIQ AH+G+GISGQEGMQAVN+SDYAI+QF +L++LLLVHGRWNY R S+VV Y+FYK+I       +Y   +G SG+  Y  +   +Y + +T LPI++ G  DQD+     L+ +P LY  G          F+ W+  AL ES  I ++ +   +   N +G   S  EYG   F L V+ V+LK+  V C WT +  L   GSVL++FL AF+  T       + +++D  G       SG YW + V   ++ +GR +AW  + R +NP L  ++ E+   D+
Sbjct: 2081 LIIDGEALEVALK-PHTKADLIGLAQYCVAVICCRVSPAQKADMVRLIRENIPEARTLAIGDGANDVAMIQAAHVGIGISGQEGMQAVNSSDYAIAQFRFLKRLLLVHGRWNYLRISKVVVYMFYKNITLVLAQYWYGFLSGASGSKVYWEIGVQVYNIFFTGLPIVVLGVLDQDLPEDMSLK-YPALYTVGPNRQLFNYYTFFRWLCAALYESMVIFLVMVYGYNTSTNTVGS-ESRVEYGIVAFTLAVLIVNLKITLVMCNWTWVPRLTWWGSVLSWFLIAFLCLTIFHFFVQLKVSYDEFGAFVPTFLSGSYWMILVIGCILALGRHFAWNQYQRLFNPELFQILQEAVMIDK 2433          
BLAST of mRNA_H-paniculata_contig383.10034.1 vs. uniprot
Match: A0A2P4Y8V4_9STRA (Phospholipid-transporting ATPase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y8V4_9STRA)

HSP 1 Score: 245 bits (625), Expect = 1.560e-69
Identity = 152/375 (40.53%), Postives = 216/375 (57.60%), Query Frame = 3
Query:   66 PPLPRGLVIDGPALLEALQTPESQCALLRAAQACHCVVGCRMSPDQKRALVSLVRENVPGTRTLSIGDGANDVPMIQTAHIGVGISGQEGMQAVNASDYAISQFAYLRKLLLVHGRWNYRRSSRVVCYLFYKSIMFAGPLVFYASFNGFSGTLFYDYVTTNLYAVVYTALPILLYGTYDQDISARTCL-RRFPQLYAYGIQDGYMRPKIFWSWMLQALLESSFITV-----MPLILLSGDRNQMGVVTSTYEYGTTTFALVVITVSLKMFWVQCRWTPIHILALLGSVLAYF-LSAFVVNTSVVLNWDYHGVLDSLVQSGLYWAVSVWCLVVVIGRDWAWKFHHRWWNPRLHHLVIE------SEHADQYRNEPP 1151
            PP    LVIDG  L  AL+  +    LL+ A+ C  V+ CR+SP QK  LV LVR+N P  RTL+IGDGANDV MIQ AH+GVGISGQEGMQA N+SDYAI+QF +L +LLLVHGRWNY R  +++ Y+FYK+++      +Y  + G+SG  FY       Y +++TALPI+L  T++QD+ A  CL   +P LY  G ++     K+ W+W+   + ES  I       M  ++  GD   M V      YG T+F +V+I V+LK+   Q  W PIHI+  +GS + +   +AF+ +   + +  ++GV  +     ++W V    +V  + RD+ WK + R + P   HL  E      +  ADQ    PP
Sbjct:  238 PPQDLALVIDGETLELALE--DCPDLLLKVAEKCVAVIACRVSPAQKAQLVRLVRDNNPKIRTLAIGDGANDVSMIQAAHVGVGISGQEGMQAANSSDYAIAQFRFLSRLLLVHGRWNYVRMGKLILYIFYKNVILNLTQFWYMIYTGYSGQKFYLEWGLQGYNLLFTALPIVLVSTFEQDVPA--CLAHNYPLLYRIGQENTRFNTKVVWAWISSCMWESLIICFGVVYGMRYLVPGGDTPTMWV------YGCTSFTIVLIVVTLKLCLHQQMWWPIHIVIYIGSFMLWIGTAAFISHGKSISSSYWNGVFSNTFHIDVFWLVVPLLVVASLSRDFMWKGYMRMFRPSYKHLAQEVNAFGLTHIADQLLTFPP 602          
BLAST of mRNA_H-paniculata_contig383.10034.1 vs. uniprot
Match: T0QJT0_SAPDV (Phospholipid-transporting ATPase n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QJT0_SAPDV)

HSP 1 Score: 249 bits (636), Expect = 8.440e-69
Identity = 150/351 (42.74%), Postives = 208/351 (59.26%), Query Frame = 3
Query:   84 LVIDGPALLEALQTPESQCALLRAAQACHCVVGCRMSPDQKRALVSLVRENVPGTRTLSIGDGANDVPMIQTAHIGVGISGQEGMQAVNASDYAISQFAYLRKLLLVHGRWNYRRSSRVVCYLFYKSIMFAGPLVFYASFNGFSGTLFYDYVTTNLYAVVYTALPILLYGTYDQDISARTCLRRFPQLYAYGIQDGYMRPKIFWSWMLQALLESSFITVMPLILLSGDRNQMGVVTSTYEYGTTTFALVVITVSLKMFWVQCRWTPIHILALLGSVLAYFLSAFVVNTSVV------LNWDYHGVLDSLVQSGLYWAVSVWCLVVVIGRDWAWKFHHRWWNPRLHHLVIES 1118
            LVIDG AL  AL+ P  +  LL  AQ C  V+ CR+SP QK  +V L+REN+P  RTL+IGDGANDV MIQ AH+G+GISGQEGMQAVN+SDYAI+QF +L++LLLVHGRWNY R S+VV Y+FYK+I       +Y   +G SG+  Y  +   +Y + +T LPI++ G  DQD+     L+ FP LY  G Q        F+ W+  AL ES  I ++ +   +   + +G   +  EYG   F L V+ V+LK+  + C WT +  +   GSVL++FL AF+  T +       +++D  G       SG YW + V    + +GR +AW    R + P L  ++ ES
Sbjct:  804 LVIDGEALEIALK-PHMKMDLLGLAQYCVAVICCRVSPAQKADMVRLIRENIPEARTLAIGDGANDVAMIQAAHVGIGISGQEGMQAVNSSDYAIAQFRFLKRLLLVHGRWNYLRISKVVVYMFYKNITLVLAQYWYGFLSGASGSKVYWEIGVQVYNIFFTGLPIVVLGVLDQDLPDHMSLK-FPALYGVGPQRQLFNYYTFFRWLCAALYESMVIFLVMVYGYNPSHSSVGS-EARVEYGIVAFTLAVLIVNLKITLIMCNWTWVPRITWWGSVLSWFLIAFLCLTVIPYFVKLKVSYDEFGAFVPTFVSGSYWLLLVIGCTLALGRHFAWNQFQRLFYPELFQILQES 1151          
BLAST of mRNA_H-paniculata_contig383.10034.1 vs. uniprot
Match: D7G0C1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0C1_ECTSI)

HSP 1 Score: 244 bits (624), Expect = 3.850e-67
Identity = 141/270 (52.22%), Postives = 155/270 (57.41%), Query Frame = 3
Query:    3 FLEQFINERDMFEQDTTGTLEPPLPRGLVIDGPALLEALQTPESQCALLRAAQ----------------------------------------------------------------------------------------------------ACHCVVGCRMSPDQKRALVSLVRENVPGTRTLSIGDGANDVPMIQTAHIGVGISGQEGMQAVNASDYAISQFAYLRKLLLVHGRWNYRRSSRVVCYLFYKSIMFAGPLVFYASFNGF 512
            FL  ++ ER+ FE D TG + PPLPRGL+IDGPALLEA+QTP+SQ ALLRAAQ                                                                                                     CH V+GCR+SPDQKRALV+LVRENVPGTRTLSIGDGANDVPMIQ AHIGVGISGQEGMQAVN+SDYAI+QFAYLRKLLLVHGRWNYRRSSRVVCYLFYKS+MFA PL+FYA  NGF
Sbjct: 1044 FLSMYVEERNRFEADDTGKVAPPLPRGLIIDGPALLEAMQTPDSQGALLRAAQKERFAPAIPERPWDRSNQAVVLLPNPRFSPSRNWISIVSPTPFATLENLKGSKTILSEAQGFFRVSLCSAPSIAADGCDMFVTRLSLIKSIFRCYSIQRQTCHSVIGCRLSPDQKRALVALVRENVPGTRTLSIGDGANDVPMIQRAHIGVGISGQEGMQAVNSSDYAIAQFAYLRKLLLVHGRWNYRRSSRVVCYLFYKSVMFACPLIFYAYTNGF 1313          
BLAST of mRNA_H-paniculata_contig383.10034.1 vs. uniprot
Match: A0A225W7A7_9STRA (Phospholipid-transporting ATPase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W7A7_9STRA)

HSP 1 Score: 244 bits (624), Expect = 4.460e-67
Identity = 153/375 (40.80%), Postives = 215/375 (57.33%), Query Frame = 3
Query:   66 PPLPRGLVIDGPALLEALQTPESQCALLRAAQACHCVVGCRMSPDQKRALVSLVRENVPGTRTLSIGDGANDVPMIQTAHIGVGISGQEGMQAVNASDYAISQFAYLRKLLLVHGRWNYRRSSRVVCYLFYKSIMFAGPLVFYASFNGFSGTLFYDYVTTNLYAVVYTALPILLYGTYDQDISARTCL-RRFPQLYAYGIQDGYMRPKIFWSWMLQALLESSFITV-----MPLILLSGDRNQMGVVTSTYEYGTTTFALVVITVSLKMFWVQCRWTPIHILALLGSVLAYF-LSAFVVNTSVVLNWDYHGVLDSLVQSGLYWAVSVWCLVVVIGRDWAWKFHHRWWNPRLHHLVIE------SEHADQYRNEPP 1151
            PP    LVIDG  L  AL+  E    LL+ A+ C  V+ CR+SP QK  LV LVR+N P  RTL+IGDGANDV MIQ AH+GVGISGQEGMQA N+SDYAI+QF +L +LLLVHGRWNY R  +++ Y+FYK+++      +Y  + G+SG  FY       Y +++TALPI+L  T++QD+ A  CL   +P LY  G ++     K+ W+W+   + ES  I       M  ++  GD   M V      YG T+F +V+I V+LK+   Q  W PIHI+  +GS + +   +AF+ +   + +  ++GV  +      +W V    +V  + RD+ WK + R + P   HL  E      +  ADQ    PP
Sbjct:  881 PPQELALVIDGETLELALE--ECPELLLKVAEKCVAVIACRVSPAQKAQLVRLVRDNNPKIRTLAIGDGANDVSMIQAAHVGVGISGQEGMQAANSSDYAIAQFRFLSRLLLVHGRWNYVRMGKLILYIFYKNVILNLTQFWYMIYTGYSGQKFYLEWGLQGYNLLFTALPIVLVSTFEQDVPA--CLAHNYPLLYRIGQENTRFNTKVVWAWISSCIWESLIICFGVVYGMRYLVPGGDTPTMWV------YGCTSFTIVLIVVTLKLCLHQQMWWPIHIVIYIGSFMLWIGTAAFISHGKSISSSYWNGVFTNTFSIDAFWLVVPLLVVASLSRDFMWKGYMRMFRPSYKHLAQEVNAFGLTHIADQLLTFPP 1245          
BLAST of mRNA_H-paniculata_contig383.10034.1 vs. uniprot
Match: A0A1V9ZIJ2_9STRA (Phospholipid-transporting ATPase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZIJ2_9STRA)

HSP 1 Score: 244 bits (622), Expect = 6.590e-67
Identity = 148/356 (41.57%), Postives = 208/356 (58.43%), Query Frame = 3
Query:   84 LVIDGPALLEALQTPESQCALLRAAQACHCVVGCRMSPDQKRALVSLVRENVPGTRTLSIGDGANDVPMIQTAHIGVGISGQEGMQAVNASDYAISQFAYLRKLLLVHGRWNYRRSSRVVCYLFYKSIMFAGPLVFYASFNGFSGTLFYDYVTTNLYAVVYTALPILLYGTYDQDISARTCLRRFPQLYAYGIQDGYMRPKIFWSWMLQALLESSFITVMPLILLSGDRNQMGVVTSTYEYGTTTFALVVITVSLKMFWVQCRWTPIHILALLGSVLAYFLSAFVVNTSVV------LNWDYHGVLDSLVQSGLYWAVSVWCLVVVIGRDWAWKFHHRWWNPRLHHLVIESEHADQ 1133
            LVIDG AL  AL+ P  +  L+  AQ C  V+ CR+SP QK  +V L+REN+P  RTL+IGDGANDV MIQ AH+G+GISGQEGMQAVN+SDYAI+QF +L++LLLVHGRWNY R S+VV Y+FYK+I       +Y   +G SG+  Y  +   +Y + +T LPI++ G  DQD+     L+ FP LY+ G          F+ W+  AL ES  I ++ +   +  ++ +G   S  EYG   F L V+ V+LK+  + C WT +  L   GSVL++FL AF+  T +       +++D  G       S  YW +      + +GR +AW    R + P L  ++ E    D+
Sbjct:  818 LVIDGEALELALK-PSMKADLIGLAQFCVAVLCCRVSPAQKADMVRLIRENIPDARTLAIGDGANDVAMIQAAHVGIGISGQEGMQAVNSSDYAIAQFRFLKRLLLVHGRWNYLRISKVVVYMFYKNITLVLAQYWYGFLSGASGSKVYWEIGVQVYNIFFTGLPIVVLGVLDQDLPDHMSLK-FPALYSVGPNRHLFNYYTFFRWLCAALYESMVIFLVMVYGYNPSKSNVGS-ESRVEYGIVAFTLAVLIVNLKITLIMCNWTWVPRLTWWGSVLSWFLIAFLCLTVIPYFVHLKVSYDEFGAFVPTFMSWSYWLLLAIGCSLALGRHFAWNQFQRLFYPELFQILQERVMLDK 1170          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig383.10034.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4DCU9_HETAK2.770e-10049.86Phospholipid-transporting ATPase (Fragment) n=1 Ta... [more]
A0A6H5KPG5_9PHAE2.520e-9549.43P-type phospholipid transporter n=1 Tax=Ectocarpus... [more]
D7FU18_ECTSI3.730e-8239.55Phospholipid-transporting ATPase, putative n=1 Tax... [more]
A0A7S3HLE4_9STRA2.510e-7240.67Phospholipid-transporting ATPase n=2 Tax=Spumella ... [more]
A0A1V9ZVV3_9STRA1.060e-7042.42P-type phospholipid transporter n=1 Tax=Thraustoth... [more]
A0A2P4Y8V4_9STRA1.560e-6940.53Phospholipid-transporting ATPase n=1 Tax=Phytophth... [more]
T0QJT0_SAPDV8.440e-6942.74Phospholipid-transporting ATPase n=2 Tax=Saprolegn... [more]
D7G0C1_ECTSI3.850e-6752.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A225W7A7_9STRA4.460e-6740.80Phospholipid-transporting ATPase n=1 Tax=Phytophth... [more]
A0A1V9ZIJ2_9STRA6.590e-6741.57Phospholipid-transporting ATPase n=1 Tax=Achlya hy... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig383contigH-paniculata_contig383:5911..14383 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score293.5
Seed ortholog evalue1.8e-76
Seed eggNOG ortholog2880.D7FU18
KEGG koko:K01530,ko:K14802
KEGG TC3.A.3.8
Hectar predicted targeting categoryother localisation
EggNOG free text desc.phospholipid-translocating ATPase activity
EggNOG OGsCOG0474@1,KOG0206@2759
Ec32 ortholog descriptionHAD-like domain
Ec32 orthologEc-02_001010.1
EC3.6.3.1
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03009
Exons11
Model size1502
Cds size1470
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig383.10034.1prot_H-paniculata_contig383.10034.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig383 5911..14351 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930176.8131049-CDS-H-paniculata_contig383:5910..61231622930176.8131049-CDS-H-paniculata_contig383:5910..6123Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig383 5911..6123 -
1691481178.408155-CDS-H-paniculata_contig383:5910..61231691481178.408155-CDS-H-paniculata_contig383:5910..6123Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig383 5911..6123 -
1622930176.8246253-CDS-H-paniculata_contig383:6490..67281622930176.8246253-CDS-H-paniculata_contig383:6490..6728Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig383 6491..6728 -
1691481178.4206219-CDS-H-paniculata_contig383:6490..67281691481178.4206219-CDS-H-paniculata_contig383:6490..6728Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig383 6491..6728 -
1622930176.839685-CDS-H-paniculata_contig383:7457..75701622930176.839685-CDS-H-paniculata_contig383:7457..7570Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig383 7458..7570 -
1691481178.4304423-CDS-H-paniculata_contig383:7457..75701691481178.4304423-CDS-H-paniculata_contig383:7457..7570Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig383 7458..7570 -
1622930176.8629103-CDS-H-paniculata_contig383:8011..80981622930176.8629103-CDS-H-paniculata_contig383:8011..8098Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig383 8012..8098 -
1691481178.4404607-CDS-H-paniculata_contig383:8011..80981691481178.4404607-CDS-H-paniculata_contig383:8011..8098Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig383 8012..8098 -
1622930176.8769946-CDS-H-paniculata_contig383:8662..88031622930176.8769946-CDS-H-paniculata_contig383:8662..8803Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig383 8663..8803 -
1691481178.4500504-CDS-H-paniculata_contig383:8662..88031691481178.4500504-CDS-H-paniculata_contig383:8662..8803Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig383 8663..8803 -
1622930176.8881912-CDS-H-paniculata_contig383:10481..105601622930176.8881912-CDS-H-paniculata_contig383:10481..10560Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig383 10482..10560 -
1691481178.4591327-CDS-H-paniculata_contig383:10481..105601691481178.4591327-CDS-H-paniculata_contig383:10481..10560Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig383 10482..10560 -
1622930176.9033093-CDS-H-paniculata_contig383:11289..114061622930176.9033093-CDS-H-paniculata_contig383:11289..11406Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig383 11290..11406 -
1691481178.476665-CDS-H-paniculata_contig383:11289..114061691481178.476665-CDS-H-paniculata_contig383:11289..11406Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig383 11290..11406 -
1622930176.9161482-CDS-H-paniculata_contig383:12035..122081622930176.9161482-CDS-H-paniculata_contig383:12035..12208Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig383 12036..12208 -
1691481178.4872537-CDS-H-paniculata_contig383:12035..122081691481178.4872537-CDS-H-paniculata_contig383:12035..12208Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig383 12036..12208 -
1622930176.9329162-CDS-H-paniculata_contig383:13055..131321622930176.9329162-CDS-H-paniculata_contig383:13055..13132Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig383 13056..13132 -
1691481178.496151-CDS-H-paniculata_contig383:13055..131321691481178.496151-CDS-H-paniculata_contig383:13055..13132Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig383 13056..13132 -
1622930176.9699326-CDS-H-paniculata_contig383:13746..138491622930176.9699326-CDS-H-paniculata_contig383:13746..13849Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig383 13747..13849 -
1691481178.505345-CDS-H-paniculata_contig383:13746..138491691481178.505345-CDS-H-paniculata_contig383:13746..13849Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig383 13747..13849 -
1622930176.9880345-CDS-H-paniculata_contig383:14222..143511622930176.9880345-CDS-H-paniculata_contig383:14222..14351Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig383 14223..14351 -
1691481178.5228963-CDS-H-paniculata_contig383:14222..143511691481178.5228963-CDS-H-paniculata_contig383:14222..14351Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig383 14223..14351 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930177.0061207-UTR-H-paniculata_contig383:14351..143831622930177.0061207-UTR-H-paniculata_contig383:14351..14383Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig383 14352..14383 -
1691481178.5347686-UTR-H-paniculata_contig383:14351..143831691481178.5347686-UTR-H-paniculata_contig383:14351..14383Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig383 14352..14383 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig383.10034.1

>prot_H-paniculata_contig383.10034.1 ID=prot_H-paniculata_contig383.10034.1|Name=mRNA_H-paniculata_contig383.10034.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=490bp
MFEQDTTGTLEPPLPRGLVIDGPALLEALQTPESQCALLRAAQACHCVVG
CRMSPDQKRALVSLVRENVPGTRTLSIGDGANDVPMIQTAHIGVGISGQE
GMQAVNASDYAISQFAYLRKLLLVHGRWNYRRSSRVVCYLFYKSIMFAGP
LVFYASFNGFSGTLFYDYVTTNLYAVVYTALPILLYGTYDQDISARTCLR
RFPQLYAYGIQDGYMRPKIFWSWMLQALLESSFITVMPLILLSGDRNQMG
VVTSTYEYGTTTFALVVITVSLKMFWVQCRWTPIHILALLGSVLAYFLSA
FVVNTSVVLNWDYHGVLDSLVQSGLYWAVSVWCLVVVIGRDWAWKFHHRW
WNPRLHHLVIESEHADQYRNEPPLTPPILDNSTSTAPVTVAGGKVSGAAA
GRGGLTCNADRLEMGRDLKQGPHTSFKASPVGSVTSSWSYDSSESAKIDN
IALTTTKASTVAFKDGQRSMMEFLNSNSTSPVTIVATKTN
back to top

mRNA from alignment at H-paniculata_contig383:5911..14383-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig383.10034.1 ID=mRNA_H-paniculata_contig383.10034.1|Name=mRNA_H-paniculata_contig383.10034.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8473bp|location=Sequence derived from alignment at H-paniculata_contig383:5911..14383- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATTTCCTGGAGCAGTTTATCAACGAGCGTGACATGTTCGAGCAAGATACC ACCGGCACGCTGGAGCCGCCTCTTCCTCGTGGCCTCGTCATCGACGGGCC TGCTCTGCTAGAAGCATTGCAAACGCCAGAGTCCCAGTGCGCTTTGCTTA GGGCTGCTCAGGTAGCCAGCACAATAGAAAGTGTACTGTTGACTGCACAA TACCGCGGTTCCTGTCTGCCGAACAATGATGTTCAGTGCTGATCTACTCA GATCCTGTTGTTTTACTCGGATTTGGACCTAGCTGGATTCTTGTTGAAAC TTTGCTGGGATATTGAGGCCGTGCTCATCGACCTTCATCTCTTCAAGAGT TCATAATCCAAAGAGAGATATTTCTCTCTTCCCACTATCCTCTCCCCCCC ACCATATGGATGCCTAGATATTTTGATCGATTCGATGTGCTCCAACCCAT TCACTAAAGCTAGACAGTAGCTGAACGTGTCTCAGAAAATAAGTTGACCT GCTCTCCTCCCGCGCCGTTTACACCTTACCTCAGGCGTGTCACTGTGTCG TTGGCTGTAGAATGTCTCCCGATCAGAAGCGGGCGTTGGTTTCTCTGGTT CGAGAGAACGTTCCCGGAACTCGGACGCTGTCCATAGGTAGGGGCAACGT GCGAGTCTTGATCATCATGTTACAACTTTCGATAACTTGTTGGTCTCTGC TGACAGCCGATCAATGTATTTTCGTGTTGATGCTAAAAGTATAATGCAAA ATAGTGGGTAAGAGTTGTTCAACGATCGGGGGGGGGAGGGGGGAATTTGG CCGTTCGTTCGTTTTGGAAGGTTCAGCGGTGGTTTATTATTCGTGGAACA ATGACGATTATTGTGACCCATGAATTGTGTATTCGTTTTCCTTGATTATC TCGCTCCAGGCCGCGTCCTTTGAAACAGTGCGGGGGAGGCGAAACCCCTC CATCGCCGTAGGGGGGCAGACACCTCTTAACGGATCAACCCCCCCACGAT CGTTGAACGACTCTTAAGTACCTCGTTTGGTTCCGAACACGCGCGTATTG TGTGCCGTCGTTCTTTGGTTCACAAGAACGATCCACAAGAACGGTGCCCA GGACTGGCGCGGGAAGTCACAATATTAGCATGTGATGTGTTCAAGTAAGC GCTCGCCGAGGTGAATGTCTGCTTCAGAATTAGAACCCAGCACTTGCCCC TGCCCCCGGACCCGATACCCATGTGCATTCCCGCTTACTTTGGCATGAAA GGCGACGGAGCGAACGATGTCCCTATGATCCAGACTGCTCACATCGGAGT CGGTATCAGCGGACAAGAAGGCATGCAGGTATGACATACACCACGAATGT GTTTGAGCATTTCGAAGGTGGAACGAAGCGCCAAAGTGCCACTGGGAACG GAACTGGGGTGTCTTCTCATTTACTACTTGCCACGTTGGGATTGACAGTT CTTTGAAGCGTTGGTTTGATTACGTAAACTCGTTTCCCCCGAGACAAGAA CTAGGTGACGGTTACGACACCCCTGTATCAGAGACCCCTCCGCCCTCCCC CCGAACCCCCCACCCAACTATCCTGTCGGTCAAATCTTCAAACCAAGAAA TGTGTCTGACTCAATGCTTGTCTCCAGCTGGGTTTAAGACGCAATACAAT AACACCGCGATTGTAGAGTAGGGAACAAACACAACGTAAAAACAACAGCT TGCCAGCATCGTAGTCATCGGCAACTCTGGTAAGTTCGTGTTCTTAAATC GTTTTGCTCTACAGTACGGGCCCGAGGATAAGAACCTGTTCCGTTGGCGA GAATCACGAACAGTGCTATTTCTCACTTTTATATAGGAATTACTGTTAGA CAACAAGTTAAACCCCATTTCTTGCAACTGGATTTCTTAGCTTCAGTAAA ACTTGAGCCTCAACTTCTTACTGGGTGATTTCTTGTCAGCGGGCCCGTAC TGTGCTACAACTAATCATTCATTTTTTGGTTAAATCCTGCAAACGTATAC CAGTGCATCGCAATAATGTTCATCTGTGTACCATCCAAGAAATACGATCA ACATCATTCGTTCGTTTGCCGTTGATGAAAAAAATTGAACTTACCACTTG GCCACCTCCAAGTGTTGTCCACCACCTCGTTTACAGTACGGTATGTATCT GTTGCTTTTTCCAAATGTGGTACAGGCCGTAAACGCCTCGGACTACGCCA TCAGCCAGTTCGCCTATCTGCGCAAGCTGCTGCTGGTGCACGGGAGGTGG AACTACCGGCGCTCGAGTCGCGTGGTCTGCTACCTATTCTACAAGTCCAT CATGTTCGCGGGACCTCTCGTTTTCTACGCCAGTTTCAACGGGTTCAGGT GCAGTCGCACCGCCAAACGCCGCGCGTAACAGGCAGCTGTTTCGGGATAG TACGCATCCCACTATTGTGTTGGATGTTGGGTTGTGTTGAGTCATGTTAG ATTGTGGGTGATTGTGGTCGATGGTAACGGGGACAGAAACGTGCCTCTAC TCTCTACTCTCTATTTTATACTCTATGGTCTACGCTCTATACTCTATACT CGCCTCTTTAGGGATGGATGTTCCGTCTCTGTGCTGAACTACATTGTTTT TCTCTCCCGTCCCTGCTATTGATATCCTGGGGCAAATTTCGAATATGCCA CAGTAGATGTGTAACTGGTGCCGACAAGTCCGAAAACCTATTCAAGCTCT ACGTAACTACTCGTAACATAAGTAGCTCTAAGCATACAGTATATTTCCCC CCCCCATTTGGATGATATTACGCTACACCTTTTTCCAAACCGCAGCGCAT CGACCGCGCGCCTAAATGCACGGATAGGGGTCCGTCATTCCAGCTGCTGC TAGACGTTTTGCCTTTGTCCTCCTCCTCTCACCACTAGACGTTCTCCTTC CCTGTGAATCCCTGTGCATCGTTTTAACCGATTGGTGTGTTTCGTTCACC GCAACTCAAAAAACGTTATCGCTGCAGTGGCACCTTATTTTATGACTACG TGACGACCAACCTGTACGCGGTGGTCTACACCGCGCTCCCCATCCTCTTA TACGGGACCTATGATCAAGATATCTCTGCTCGAACATGCCTCCGGTAAGA AGTCGAACATCCACAAATTCAGTGCAATCGCAGTCGCCTGCAGACCACTG CTCCCGCCCCGGCTACGCTTCGTCATGAATTTCCAGAACTTCAAAATGTT TCATTTTTATGCGAGGGGCATCTTGTTTTGCGTGTTCTTGTTTCGGGATT CTCTCTTTAGAAGCGTCAGACATGTCCAAGTTCTTGAAAAATTGTTTACT AATTACGATAGAAGCAGGAAACATTGTTCCAATCTCCCTCCCACCCTTGT TCCCCGTTTTCTCCACGTCTCTTGCAACTCAAAATTGCCTGACAGCACAC CAGCAACGACCTTAAATTAAGAACTCATGAGTACGAAAAAAAAAGAAGAA ATCAGTATGTGGGTATACTGTTATATATATATCAATAAATAATGGCCCTT TGTGACAAAAACTTCCAGTCAAGAAGCCGAAACTTTCACACTTTCTTGTT TTTCCCTTTGTTTTGGGTGCATTCAGACTTGTTTGTAGGTAGGCGTATCG GTCAGGAAGGCAGAATTTTCCCGATTATAAACATGCTGAAATACAGCTTG AGCCACCCCCGCTCACGTACCGTGGGTTACAGGTTACGGGTACGGCAACG ATGCAGCCTGCCGGCTGGCATAGGATACAGAACGTGGCGATTAAGCGAAG CCATGATTGCTACACAAACCTCATGAAACGAACGCAAATTACAATCTCTG CCTGTTCGCGCCGCGTGATCAAGCAGGTTCCCGCAGCTGTATGCCTACGG CATACAGGATGGGTACATGAGGCCAAAGATATTTTGGTCCTGGATGCTGC AGGTAAACTTTATTTCAAACGCGTCATATTCCAAACTCGTGGTACCAATG TTTTCTTTGTTACGGTGCAGCGTGTACAACGCGTTTGAATCCATCATCTC CAACCATACCAGTGTTCGCTGATATGCGATGTGTACAAGATTTCGACGGC TGACCAAACACACCATGCACCAGTCAGACTTTCGTGCTCGTGTTATGTTG GCAAGTGATGGGGGCATCAGCGCATTTGTGTATAATAGCTCTACCTCCAA AGCGCTAACTTTATTTATATGGATGTATATAGGTGTTGGTGCTCATAAGC TATCGAAGCTCATACCTATTGGCGTATCTGCTGTAGGGCACCGGTAAGTG GCGACACAGGCTGGCGTAGGCTCCGTGAGGCAGCCAAACGCAGGGACAGC TGGGAAACTGGGATGCAGTGTACACCACTTGAGATCGAAGATATTGAACT ACTGCATGCCTTCTATTAATTAGGACTTAGACAAGGAGAGAAGACCGAAC CACAGACCCGCTGGCTGCTGAAGTCATAGTGGCTGTTGTGAGAGAGTGAC TGAAGTGGGTCAGCCACACTCGGTTGATCCAGGACAAGCACCCAGATAAT TGCTTGGAAGCGGAAGGAACAAATACCCGCATACTCTCGCTCTCTCCCGG TACTCTCAAGAAACGTATCAGAAATTTCTTAGTCGAACTGGCACTAGCTG GTCCGCTTTTTTGCTGTGACCGGACATTGTTACAAGGTCTAGAATGTAGA TATCGATACCTGTACGTCCAACAGCTTCTACTGCTGTGATGCCTGCAGCA ATGCGATGATACTGAGCACTCTCTGGATTGGTTGGTGAACTCCTGTCTCC TAATACCAAGTGTTGCCACTGCACTTCACGCTACAACGCTCATACACTAC TGTCGTTGACTCTGGCTACTAAGCCATACTTCAATAATATGCTGATACGT CGCCTTTTCCGGTCAGATCATTCGGTTTAGTTGGGTTTGACAACCGTAAC AAGGGTCACGGTTAACGCAAGTGCAATAGACGAGATGAGATCATTCTTGG AGCGTAGACATTCAACCAGAGCTACAGACCATATAGCTCGAGGCAAAGAA CTCAAGCTCATCTGATACATCTATCTATTTGTTACATCCTAAAGCAAGAC CCGGTCGGGTGTTGGCCTCAGGGCCAACGTATGTGAATGTCTGGATAAAA GGATTATATACGATGTATATTTTTATGGCAGCCCCCAGCAGGCCTCTCAA AGTGTGGATCACTCCAGCTGCGACGTTTTCCATTGGTATTGCTGACGAAG GGAATCCTCCTGCATGCCTGTTCTTTCAGTTTCACCCTGTTGAACACTTT ATGATCAGACTCCACAATTTCTTTATATTCTACATCGTTGTACCGTAGAT ATACTAGATGTATATACACTGTAAATTACCTATTCCATCACCAGCTTTGT GTACAAGGGTGCTATATACTTCGATATACACCATATTGTAATCAGCAGTC TTCCGACAATATACAGTCTCAGATCTAGCCATTCACAATCATGATGAATA TTGCATACGGGAAAGATCCTACGTATAACCATAGTTCTAAACCGTATCAC CAACCTCCCCCCCCGCCCCCTCCATCCTCCGTATGATGATTCCTGTAACC CACTTTTGCCTGTGTTTTTCTCCGACACAGGCTCTTCTGGAAAGTTCATT CATCACTGTCATGCCGCTCATATTGCTGAGTGGAGACAGAAACCAAATGG GGGTAGTAACATCAACGTACGAGTACGGAACGACCACGTTCGCCCTCGTC GTCATCACAGTCTCACTCAAGGTGAAGACACCTTCAAAGTTCCGTCCGTC GCACAAGCTATCGTGAACAATCAGCACCAACTGTTGCCATGTTCGATACC CGAAACTAACGAATGTCTCCCTCAGCTCGCCACGGGAAATGCGACAACCA GTCGAACAAACTTTGAATGTTGTGTTTCGTAAACTCAGATTATTGAAATA ATTACCCCTTCTTCCTGACGTAGAATCCCGGTCGTCGTAGTTACACCTCT TCGGCATCACGACAAAAACAACGTACATTGGATCGACTTGTTTTGACACG ATAAAAATGCTTTACTACTATATAGCAACGCTATACGTGGCTCCAGTGCC ATCCAGCTGTACCCGGTCGAAGGGAATCTTGACGCAAAACCGTTTCGCCC CGTTACCTTCTCTCTATGCCTATCGCAAGTGGCGCACACTTGTAAAAGTC CTTCCTACGAACAACTACATCCAATCCATTGGTAGTGACATGTATTTCGA ACAATCGTAGTCTTCAAATCTCGTGTATGTGCTATTTAACTATCACGATG ATAACGTGTTTGTTCAAACTATCGTGCCGTTTCAGATGTTCTGGGTGCAA TGCCGCTGGACGCCCATACACATCTTGGCCTTATTGGGTTCCGTCCTAGC CTATTTCCTGTCGGCCTTCGTGGTAAGTCCACAATATTTCGCGACCAGCG ACAGATACCACTTGAAGTTGGAGTAGCTCATTTCAGGCAACTACTGCATT GTACTTACCTTGAACTTCATGTTATCGAATGTGATATGACCAGCCTTGCC CACCCTTTTATCACTAGCGACTCAGTGGTACTGTCGAAGAGCGTTGTATA CATATTGTCAAGAAGAGCGAAGTGATACCTCGTAAGCTATGTTGCTCTAA CCAACTCTCATTGCAGCATTTCTCTGCCCCCAGTTAATGTAAGATTCATG TCGTATATGTATTCAAACACCATAATCAAAACCACAAATTGAGCGATTGT AACTTATGAGAGAGGAGCTCAGTTGATTTTTCATCAAAGGAGCAGCAAGT GCTGCCACGTGCAGCAGCTGGTCCTCACCACTGGCACATGTCTTTCCCTG TTCTCCCGAAAAGGTCAATACCTCTGTCGTCCTCAACTGGGACTACCACG GAGTGCTAGACTCTCTCGTGCAAAGTGGCCTGTACTGGGCCGTCAGCGTT TGGTGCCTCGTTGTCGTCATTGGGAGGTGAACTGTATTCCTGTACCTGGC GAAATCTACCTGATTGAGTAGGTCAGCAATTTAGACGTCGTGTTTCCATG CACTGCTGCGTATCGTTTCCTACCATCAGGTCGACGCTCGATATCACTTA ACAATTTGCAAACATACGTGGGATGTACATAAGCACTCGGTCGCCAAACA CGTAATCGGCCAGGTAAATACTGGGCTCGATTCGTCAGAGCTTCAAGAAA CGACCTCACGGTGTTTGTTTTAGGTAAATAGCCTAGCTCTAGAAGTGCTA CGTATCTCGCCGATGGAATTTGACAACGACACTAATATGGCATCAAAACT GTTTGAGATTGATCGATCAAACCACATACGAGACGCACCAATCACGCCAG AGAACACAACGGCGAGAAGAAAACAACAGGCATGTAATCTAGTGCTCGTG CACGCACTGGCGGGTGGAGTACATGCTACATACGTAAGGGTAACTGTCCA AGAAAAAGCATCAACAACAACACACAAGTGTTTTTCAACCGCAAGTCCTC ACTGCACTAATCTCAACTTGATCTGTAGTCTTGAAACAAAAACGAGTTAT TGTCAAGCGCAATGGCCTCACTCCACCAATTCGAAACCAGGCCCAACTTC AAATTTAACCAAGGCTATATCAAACGAAAACTAGCCCCGAAAACTCCCGC CCATATTATCTATCTCTCCATAACCACCGTGGTACCTGTTCTCTGCTATC TCAAGGGACTGGGCCTGGAAATTTCACCATCGATGGTGGAATCCCCGACT GCATCATCTCGTCATCGAGTCCGAACATGCTGATCAGTACCGTAACGAAC CGCCGTTGACACCTCCAATACTGGACAACTCAACCTCAACCGCGCCCGTG ACGGTGGCTGGGGGTAAAGTTAGCGGCGCTGCTGCTGGACGAGGTGGACT TACATGCAATGCTGACAGACTGGAGATGGGAAGAGATCTAAAGGTATTCA GTGTGGTGGCCATTGATGTCCGCCGAGAGTCACAGGACCGACCTACTTTA CTTCCCGCAGGCTTTCGTGTCGTTGCTTCACTCACTGTGCTAGGATAGGA TGAGACAAGGTGTAGTAGATTATATGTATTGCTACAGCAGATTCTCCGTA CATGAAAGCATATACTTGGAGGGCACCAATAATATCCTGTAGAGGCTGCT GAGGCGGTACGGGGTAAATACCCTGCATTCCTGGGACGGATATGGATTCT TGAAGGTGCCCTTAACGATAATATCCAAGCTTCGCAACACACACAGTGCG CAGGACCCCTTCAGCAGCATGTACACTCACCGTTTCTCAATCGTCTGGCA ACAACAACAGCAAGGCCCCCACACCTCCTTCAAAGCTTCGCCAGTGGGTA GCGTTACTAGCAGCTGGTCCTATGATTCATCGGAGAGCGCGAAAATCGAC AATATAGCCCTGACCACAACGAAGGCCTCCACCGTAGCATTCAAGGACGG TCAGCGAAGTATGATGGAATTCCTCAACTCCAATTCAACATCCCCGGTCA CAATCGTTGCGACCAAAACAAAC
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig383:5911..14383-

>mRNA_H-paniculata_contig383.10034.1 ID=mRNA_H-paniculata_contig383.10034.1|Name=mRNA_H-paniculata_contig383.10034.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2940bp|location=Sequence derived from alignment at H-paniculata_contig383:5911..14383- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTTCGAGCAAGATACCACCGGCACGCTGGAGCCGCCTCTTCCTCGTGG
CCTCGTCATCGACGGGCCTGCTCTGCTAGAAGCATTGCAAACGCCAGAGT
CCCAGTGCGCTTTGCTTAGGGCTGCTCAGATGTTCGAGCAAGATACCACC
GGCACGCTGGAGCCGCCTCTTCCTCGTGGCCTCGTCATCGACGGGCCTGC
TCTGCTAGAAGCATTGCAAACGCCAGAGTCCCAGTGCGCTTTGCTTAGGG
CTGCTCAGGCGTGTCACTGTGTCGTTGGCTGTAGAATGTCTCCCGATCAG
AAGCGGGCGTTGGTTTCTCTGGTTCGAGAGAACGTTCCCGGAACTCGGAC
GCTGTCCATAGGCGTGTCACTGTGTCGTTGGCTGTAGAATGTCTCCCGAT
CAGAAGCGGGCGTTGGTTTCTCTGGTTCGAGAGAACGTTCCCGGAACTCG
GACGCTGTCCATAGGCGACGGAGCGAACGATGTCCCTATGATCCAGACTG
CTCACATCGGAGTCGGTATCAGCGGACAAGAAGGCATGCAGGCGACGGAG
CGAACGATGTCCCTATGATCCAGACTGCTCACATCGGAGTCGGTATCAGC
GGACAAGAAGGCATGCAGGCCGTAAACGCCTCGGACTACGCCATCAGCCA
GTTCGCCTATCTGCGCAAGCTGCTGCTGGTGCACGGGAGGTGGAACTACC
GGCGCTCGAGTCGCGTGGTCTGCTACCTATTCTACAAGTCCATCATGTTC
GCGGGACCTCTCGTTTTCTACGCCAGTTTCAACGGGTTCAGGCCGTAAAC
GCCTCGGACTACGCCATCAGCCAGTTCGCCTATCTGCGCAAGCTGCTGCT
GGTGCACGGGAGGTGGAACTACCGGCGCTCGAGTCGCGTGGTCTGCTACC
TATTCTACAAGTCCATCATGTTCGCGGGACCTCTCGTTTTCTACGCCAGT
TTCAACGGGTTCAGTGGCACCTTATTTTATGACTACGTGACGACCAACCT
GTACGCGGTGGTCTACACCGCGCTCCCCATCCTCTTATACGGGACCTATG
ATCAAGATATCTCTGCTCGAACATGCCTCCGTGGCACCTTATTTTATGAC
TACGTGACGACCAACCTGTACGCGGTGGTCTACACCGCGCTCCCCATCCT
CTTATACGGGACCTATGATCAAGATATCTCTGCTCGAACATGCCTCCGCA
GGTTCCCGCAGCTGTATGCCTACGGCATACAGGATGGGTACATGAGGCCA
AAGATATTTTGGTCCTGGATGCTGCAGCAGGTTCCCGCAGCTGTATGCCT
ACGGCATACAGGATGGGTACATGAGGCCAAAGATATTTTGGTCCTGGATG
CTGCAGGCTCTTCTGGAAAGTTCATTCATCACTGTCATGCCGCTCATATT
GCTGAGTGGAGACAGAAACCAAATGGGGGTAGTAACATCAACGTACGAGT
ACGGAACGACCACGTTCGCCCTCGTCGTCATCACAGTCTCACTCAAGGCT
CTTCTGGAAAGTTCATTCATCACTGTCATGCCGCTCATATTGCTGAGTGG
AGACAGAAACCAAATGGGGGTAGTAACATCAACGTACGAGTACGGAACGA
CCACGTTCGCCCTCGTCGTCATCACAGTCTCACTCAAGATGTTCTGGGTG
CAATGCCGCTGGACGCCCATACACATCTTGGCCTTATTGGGTTCCGTCCT
AGCCTATTTCCTGTCGGCCTTCGTGATGTTCTGGGTGCAATGCCGCTGGA
CGCCCATACACATCTTGGCCTTATTGGGTTCCGTCCTAGCCTATTTCCTG
TCGGCCTTCGTGGTCAATACCTCTGTCGTCCTCAACTGGGACTACCACGG
AGTGCTAGACTCTCTCGTGCAAAGTGGCCTGTACTGGGCCGTCAGCGTTT
GGTGCCTCGTTGTCGTCATTGGGAGGTCAATACCTCTGTCGTCCTCAACT
GGGACTACCACGGAGTGCTAGACTCTCTCGTGCAAAGTGGCCTGTACTGG
GCCGTCAGCGTTTGGTGCCTCGTTGTCGTCATTGGGAGGGACTGGGCCTG
GAAATTTCACCATCGATGGTGGAATCCCCGACTGCATCATCTCGTCATCG
AGTCCGAACATGCTGATCAGTACCGTAACGAACCGCCGTTGACACCTCCA
ATACTGGACAACTCAACCTCAACCGCGCCCGTGACGGTGGCTGGGGGTAA
AGTTAGCGGCGCTGCTGCTGGACGAGGTGGACTTACATGCAATGCTGACA
GACTGGAGATGGGAAGAGATCTAAAGGGACTGGGCCTGGAAATTTCACCA
TCGATGGTGGAATCCCCGACTGCATCATCTCGTCATCGAGTCCGAACATG
CTGATCAGTACCGTAACGAACCGCCGTTGACACCTCCAATACTGGACAAC
TCAACCTCAACCGCGCCCGTGACGGTGGCTGGGGGTAAAGTTAGCGGCGC
TGCTGCTGGACGAGGTGGACTTACATGCAATGCTGACAGACTGGAGATGG
GAAGAGATCTAAAGCAAGGCCCCCACACCTCCTTCAAAGCTTCGCCAGTG
GGTAGCGTTACTAGCAGCTGGTCCTATGATTCATCGGAGAGCGCGAAAAT
CGACAATATAGCCCTGACCACAACGAAGGCCTCCACCGTAGCATTCAAGG
ACGGTCAGCGAAGTATGATGGAATTCCTCAACTCCAATTCAACATCCCCG
GTCACAATCGTTGCGACCAAAACAAACCAAGGCCCCCACACCTCCTTCAA
AGCTTCGCCAGTGGGTAGCGTTACTAGCAGCTGGTCCTATGATTCATCGG
AGAGCGCGAAAATCGACAATATAGCCCTGACCACAACGAAGGCCTCCACC
GTAGCATTCAAGGACGGTCAGCGAAGTATGATGGAATTCCTCAACTCCAA
TTCAACATCCCCGGTCACAATCGTTGCGACCAAAACAAAC
back to top