mRNA_H-paniculata_contig3826.10028.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3826.10028.1 vs. uniprot
Match: A0A6H5KPY4_9PHAE (Histone acetyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPY4_9PHAE) HSP 1 Score: 122 bits (306), Expect = 8.460e-30 Identity = 83/87 (95.40%), Postives = 84/87 (96.55%), Query Frame = 2
Query: 83 LRHASKCPAEGEQCKVTPHCQAMKRLWKHIAECKNQQCPIXXXXXXXXXXXXXXXXXXXXXXVCAPVREVIAKSHQRQMIVQEAARN 343
LRHASKCPAEGEQCKVTPHCQAMKRLWKHIAECKNQQCPIXXXXXXXXXXXXXXXXXXXXXXVCAPVREVIAKSHQRQM+ Q ARN
Sbjct: 900 LRHASKCPAEGEQCKVTPHCQAMKRLWKHIAECKNQQCPIXXXXXXXXXXXXXXXXXXXXXXVCAPVREVIAKSHQRQMVTQ--ARN 984
BLAST of mRNA_H-paniculata_contig3826.10028.1 vs. uniprot
Match: D8LPT9_ECTSI (Histone acetyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPT9_ECTSI) HSP 1 Score: 120 bits (302), Expect = 2.870e-29 Identity = 61/92 (66.30%), Postives = 62/92 (67.39%), Query Frame = 2
Query: 83 LRHASKCPAEGEQCKVTPHCQAMKRLWKHIAECKNQQCPIXXXXXXXXXXXXXXXXXXXXXXVCAPVREVIAKSHQRQMIVQEAARNNRGDG 358
LRHASKCPAEGEQCKVTPHCQAMKRLWKHIAECKNQQCP VCAPVREVIAKSHQRQM+ QEA G G
Sbjct: 107 LRHASKCPAEGEQCKVTPHCQAMKRLWKHIAECKNQQCP------------------DLKCAVCAPVREVIAKSHQRQMVTQEARNRVAGSG 180
BLAST of mRNA_H-paniculata_contig3826.10028.1 vs. uniprot
Match: A0A6U3SN67_9STRA (Histone acetyltransferase (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3SN67_9STRA) HSP 1 Score: 106 bits (264), Expect = 3.770e-24 Identity = 77/120 (64.17%), Postives = 90/120 (75.00%), Query Frame = 2
Query: 32 PEDRKAALRQQQQRLLLLRHASKCPAEGEQCKVTPHCQAMKRLWKHIAECKNQQCPIXXXXXXXXXXXXXXXXXXXXXXVCAPVREVIAKSHQRQMIVQ-------EAARNNRGDGGGAG 370
P DR+ LR QQQRLLLLRHA+KCP + QC VTPHC MKRLWKHIAECK+Q+C +XXXXXXXXXXXXXXXXXXXXX VC PVRE I +SH++Q +Q +A + N+ G AG
Sbjct: 61 PSDRQQVLRHQQQRLLLLRHAAKCPHQDNQCPVTPHCAGMKRLWKHIAECKDQKCMVXXXXXXXXXXXXXXXXXXXXXPVCGPVREAIHRSHEKQKQMQALKQGHQQALQQNQLPAGSAG 180
BLAST of mRNA_H-paniculata_contig3826.10028.1 vs. uniprot
Match: A0A7S1UG10_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UG10_9STRA) HSP 1 Score: 103 bits (256), Expect = 3.180e-23 Identity = 74/98 (75.51%), Postives = 83/98 (84.69%), Query Frame = 2
Query: 29 TPEDRKAALRQQQQRLLLLRHASKCPAE---GEQCKVTPHCQAMKRLWKHIAECKNQQCPIXXXXXXXXXXXXXXXXXXXXXXVCAPVREVIAKSHQR 313
T E KA LRQQQQRLLLLRHASKCP + G+QC VTPHC +MK+LWKHIAECK+Q+C +XXXXXXXXXXXXXXXXXXXXX VCAPVRE I +S Q+
Sbjct: 386 TKEQHKALLRQQQQRLLLLRHASKCPFDSESGQQCTVTPHCASMKKLWKHIAECKDQRCQVXXXXXXXXXXXXXXXXXXXXXSVCAPVREAIQRSRQK 483
BLAST of mRNA_H-paniculata_contig3826.10028.1 vs. uniprot
Match: A0A7S2R3Z8_9STRA (Histone acetyltransferase n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R3Z8_9STRA) HSP 1 Score: 102 bits (255), Expect = 6.250e-23 Identity = 71/98 (72.45%), Postives = 82/98 (83.67%), Query Frame = 2
Query: 38 DRKAALRQQQQRLLLLRHASKCPAEGEQCKVTPHCQAMKRLWKHIAECKNQQCPIXXXXXXXXXXXXXXXXXXXXXXVCAPVREVIAKSHQRQMIVQE 331
DR+ LR QQQRLLLLRHA+KCP E +C VTPHC MKRLWKHIAECK+Q+C +XXXXXXXXXXXXXXXXXXXXX VC PVRE I +SH++Q +Q+
Sbjct: 47 DRQQVLRHQQQRLLLLRHAAKCPHEDGRCPVTPHCAGMKRLWKHIAECKDQKCLVXXXXXXXXXXXXXXXXXXXXXPVCGPVREAIHRSHEKQKQIQK 144
BLAST of mRNA_H-paniculata_contig3826.10028.1 vs. uniprot
Match: A0A7S4WAS7_9STRA (Histone acetyltransferase (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4WAS7_9STRA) HSP 1 Score: 101 bits (252), Expect = 1.220e-22 Identity = 71/97 (73.20%), Postives = 81/97 (83.51%), Query Frame = 2
Query: 38 DRKAALRQQQQRLLLLRHASKCPAEGEQCKVTPHCQAMKRLWKHIAECKNQQCPIXXXXXXXXXXXXXXXXXXXXXXVCAPVREVIAKSHQRQMIVQ 328
DR+ LR QQQRLLLLRHA+KCP E +C VTPHC MKRLWKHIAECK+Q+C +XXXXXXXXXXXXXXXXXXXXX VC PVRE I +SH++Q +Q
Sbjct: 260 DRQQVLRHQQQRLLLLRHAAKCPHEDGRCPVTPHCAGMKRLWKHIAECKDQKCLVXXXXXXXXXXXXXXXXXXXXXPVCGPVREAIHRSHEKQKHMQ 356
BLAST of mRNA_H-paniculata_contig3826.10028.1 vs. uniprot
Match: A0A7S2UKV4_9STRA (Histone acetyltransferase (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UKV4_9STRA) HSP 1 Score: 101 bits (252), Expect = 1.530e-22 Identity = 71/97 (73.20%), Postives = 81/97 (83.51%), Query Frame = 2
Query: 38 DRKAALRQQQQRLLLLRHASKCPAEGEQCKVTPHCQAMKRLWKHIAECKNQQCPIXXXXXXXXXXXXXXXXXXXXXXVCAPVREVIAKSHQRQMIVQ 328
DR+ LR QQQRLLLLRHA+KCP E +C VTPHC MKRLWKHIAECK+Q+C +XXXXXXXXXXXXXXXXXXXXX VC PVRE I +SH++Q +Q
Sbjct: 386 DRQQVLRHQQQRLLLLRHAAKCPHEDGRCPVTPHCAGMKRLWKHIAECKDQKCLVXXXXXXXXXXXXXXXXXXXXXPVCGPVREAIHRSHEKQKQMQ 482
BLAST of mRNA_H-paniculata_contig3826.10028.1 vs. uniprot
Match: A0A7S2UIC4_9STRA (Histone acetyltransferase n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UIC4_9STRA) HSP 1 Score: 101 bits (252), Expect = 1.590e-22 Identity = 71/97 (73.20%), Postives = 81/97 (83.51%), Query Frame = 2
Query: 38 DRKAALRQQQQRLLLLRHASKCPAEGEQCKVTPHCQAMKRLWKHIAECKNQQCPIXXXXXXXXXXXXXXXXXXXXXXVCAPVREVIAKSHQRQMIVQ 328
DR+ LR QQQRLLLLRHA+KCP E +C VTPHC MKRLWKHIAECK+Q+C +XXXXXXXXXXXXXXXXXXXXX VC PVRE I +SH++Q +Q
Sbjct: 386 DRQQVLRHQQQRLLLLRHAAKCPHEDGRCPVTPHCAGMKRLWKHIAECKDQKCLVXXXXXXXXXXXXXXXXXXXXXPVCGPVREAIHRSHEKQKQMQ 482
BLAST of mRNA_H-paniculata_contig3826.10028.1 vs. uniprot
Match: A0A7S4ILK3_9STRA (Histone acetyltransferase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4ILK3_9STRA) HSP 1 Score: 100 bits (248), Expect = 5.260e-22 Identity = 68/103 (66.02%), Postives = 83/103 (80.58%), Query Frame = 2
Query: 53 LRQQQQRLLLLRHASKCPAEGEQCKVTPHCQAMKRLWKHIAECKNQQCPIXXXXXXXXXXXXXXXXXXXXXXVCAPVREVIAKSHQRQMIVQEAARNNRGDGG 361
++ +QQRLLLLRHASKCP E +CKVTP+C +MKRLW+HI++C++QQCP+ XXXXXXXXXXXXXXXXXXXX CAPVR+ I KS +R+ Q A RG GG
Sbjct: 160 IKHKQQRLLLLRHASKCPYEDGKCKVTPYCASMKRLWRHISDCRDQQCPVQHXXXXXXXXXXXXXXXXXXXXACAPVRDTIRKSQKREEERQRAHAQQRGQGG 262
BLAST of mRNA_H-paniculata_contig3826.10028.1 vs. uniprot
Match: A0A7S4MNF2_9STRA (Histone acetyltransferase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MNF2_9STRA) HSP 1 Score: 100 bits (248), Expect = 5.470e-22 Identity = 68/103 (66.02%), Postives = 83/103 (80.58%), Query Frame = 2
Query: 53 LRQQQQRLLLLRHASKCPAEGEQCKVTPHCQAMKRLWKHIAECKNQQCPIXXXXXXXXXXXXXXXXXXXXXXVCAPVREVIAKSHQRQMIVQEAARNNRGDGG 361
++ +QQRLLLLRHASKCP E +CKVTP+C +MKRLW+HI++C++QQCP+ XXXXXXXXXXXXXXXXXXXX CAPVR+ I KS +R+ Q A RG GG
Sbjct: 160 IKHKQQRLLLLRHASKCPYEDGKCKVTPYCASMKRLWRHISDCRDQQCPVQHXXXXXXXXXXXXXXXXXXXXACAPVRDTIRKSQKREEERQRAHAQQRGQGG 262 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3826.10028.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3826.10028.1 >prot_H-paniculata_contig3826.10028.1 ID=prot_H-paniculata_contig3826.10028.1|Name=mRNA_H-paniculata_contig3826.10028.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=127bp WGKAAEYSVYTGRPQGGASSATTAAASSATCEQVSSRGGTVQGYAALPGDback to top mRNA from alignment at H-paniculata_contig3826:13975..16704+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3826.10028.1 ID=mRNA_H-paniculata_contig3826.10028.1|Name=mRNA_H-paniculata_contig3826.10028.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2730bp|location=Sequence derived from alignment at H-paniculata_contig3826:13975..16704+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3826:13975..16704+ >mRNA_H-paniculata_contig3826.10028.1 ID=mRNA_H-paniculata_contig3826.10028.1|Name=mRNA_H-paniculata_contig3826.10028.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=762bp|location=Sequence derived from alignment at H-paniculata_contig3826:13975..16704+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |