mRNA_H-paniculata_contig3826.10026.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3826.10026.1 vs. uniprot
Match: D8LPT8_ECTSI (KIX_2 domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPT8_ECTSI) HSP 1 Score: 148 bits (373), Expect = 1.610e-39 Identity = 74/85 (87.06%), Postives = 79/85 (92.94%), Query Frame = 1
Query: 19 GTGLLWQSNNDIPFRKEILAKIVTYLQQRKPHARPEWIQKVPLMAKRLEDNLYRTARSFKEYKDHNTLRTRLQQLAARLGTNAQQ 273
G GL WQSNNDIP RKEIL+KIVTYLQQRKP+ARPEWIQKVPLMAKRLED+LYR A+SF+EYKDH TLR RLQQLAARLGTNAQQ
Sbjct: 49 GNGLSWQSNNDIPSRKEILSKIVTYLQQRKPNARPEWIQKVPLMAKRLEDSLYRNAKSFQEYKDHATLRQRLQQLAARLGTNAQQ 133
BLAST of mRNA_H-paniculata_contig3826.10026.1 vs. uniprot
Match: A0A6H5KPY4_9PHAE (Histone acetyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPY4_9PHAE) HSP 1 Score: 149 bits (377), Expect = 2.520e-37 Identity = 74/85 (87.06%), Postives = 80/85 (94.12%), Query Frame = 1
Query: 19 GTGLLWQSNNDIPFRKEILAKIVTYLQQRKPHARPEWIQKVPLMAKRLEDNLYRTARSFKEYKDHNTLRTRLQQLAARLGTNAQQ 273
G GL+WQSNNDIP RKEIL+KIVTYLQQRKP+ARPEWIQKVPLMAKRLE++LYR A+SFKEYKDH TLR RLQQLAARLGTNAQQ
Sbjct: 436 GNGLIWQSNNDIPSRKEILSKIVTYLQQRKPNARPEWIQKVPLMAKRLEESLYRNAKSFKEYKDHATLRQRLQQLAARLGTNAQQ 520
BLAST of mRNA_H-paniculata_contig3826.10026.1 vs. uniprot
Match: A0A835Z250_9STRA (KIX_2 domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z250_9STRA) HSP 1 Score: 125 bits (314), Expect = 1.420e-32 Identity = 62/80 (77.50%), Postives = 69/80 (86.25%), Query Frame = 1
Query: 34 WQSNNDIPFRKEILAKIVTYLQQRKPHARPEWIQKVPLMAKRLEDNLYRTARSFKEYKDHNTLRTRLQQLAARLGTNAQQ 273
WQSNNDIP RK+IL++IV YLQQRKP+ARPEWI+KVPLMAKRLED+LYR A +F EY D NTLR RLQQLA RLG AQQ
Sbjct: 60 WQSNNDIPHRKKILSRIVVYLQQRKPNARPEWIKKVPLMAKRLEDSLYRNAATFAEYNDMNTLRARLQQLALRLGNKAQQ 139
BLAST of mRNA_H-paniculata_contig3826.10026.1 vs. uniprot
Match: A0A835Z470_9STRA (KIX_2 domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z470_9STRA) HSP 1 Score: 107 bits (266), Expect = 3.420e-26 Identity = 51/75 (68.00%), Postives = 63/75 (84.00%), Query Frame = 1
Query: 34 WQSNNDIPFRKEILAKIVTYLQQRKPHARPEWIQKVPLMAKRLEDNLYRTARSFKEYKDHNTLRTRLQQLAARLG 258
WQS++D+P R++IL++IV YL QR+P+A PEW++KVPLMAKRLED LYR A SF EY D +TLR RLQQLA RLG
Sbjct: 10 WQSDDDVPHRRKILSRIVLYLHQRRPNAHPEWVEKVPLMAKRLEDALYRDAASFAEYNDMSTLRARLQQLALRLG 84
BLAST of mRNA_H-paniculata_contig3826.10026.1 vs. uniprot
Match: A0A835Z5N2_9STRA (KIX_2 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5N2_9STRA) HSP 1 Score: 102 bits (253), Expect = 4.250e-24 Identity = 49/74 (66.22%), Postives = 62/74 (83.78%), Query Frame = 1
Query: 34 WQSNNDIPFRKEILAKIVTYLQQRKPHARPEWIQKVPLMAKRLEDNLYRTARSFKEYKDHNTLRTRLQQLAARL 255
WQ+N+D+P RK+IL++I+ YL+Q + + RPEWI+KVPLMA+RLED LYR A SF EY D NTLRTRLQ LA+RL
Sbjct: 12 WQANDDMPHRKKILSRILVYLRQHRRNVRPEWIKKVPLMAQRLEDTLYRDAASFAEYNDMNTLRTRLQALASRL 85
BLAST of mRNA_H-paniculata_contig3826.10026.1 vs. uniprot
Match: A0A835ZBX7_9STRA (KIX_2 domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBX7_9STRA) HSP 1 Score: 101 bits (251), Expect = 2.030e-23 Identity = 50/80 (62.50%), Postives = 63/80 (78.75%), Query Frame = 1
Query: 34 WQSNNDIPFRKEILAKIVTYLQQRKPHARPEWIQKVPLMAKRLEDNLYRTARSFKEYKDHNTLRTRLQQLAARLGTNAQQ 273
WQSN D R++IL+++V YLQQRKP+ARPEWI++VP A+RLE++LYR A +F EY D TL RLQQLA RLG NA+Q
Sbjct: 44 WQSNQDRAHRRKILSRVVLYLQQRKPNARPEWIREVPRTAQRLENSLYRKAATFAEYNDMKTLHARLQQLALRLGHNARQ 123
BLAST of mRNA_H-paniculata_contig3826.10026.1 vs. uniprot
Match: A0A0W8BWP1_PHYNI (KIX_2 domain-containing protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8BWP1_PHYNI) HSP 1 Score: 103 bits (258), Expect = 1.360e-21 Identity = 51/93 (54.84%), Postives = 70/93 (75.27%), Query Frame = 1
Query: 7 GGSNGTGLLWQSNNDIPFRKEILAKIVTYLQQRKPHARPEWIQKVPLMAKRLEDNLYRTARSFKEYKDHNTLRTRLQQLAARLGTNAQQRSKG 285
GGSN T WQS ND+P R++++ KIV+ LQQRKP A EWI+++P MA+RLED+LYRTA++ EY D ++L+TRLQ LA +G AQ ++ G
Sbjct: 390 GGSNDTQTAWQSENDLPLRRKMIGKIVSLLQQRKPDAPAEWIRRLPDMARRLEDSLYRTAKNRDEYGDFSSLKTRLQHLAVTMGARAQHKAGG 482
BLAST of mRNA_H-paniculata_contig3826.10026.1 vs. uniprot
Match: D0N7S8_PHYIT (Uncharacterized protein n=13 Tax=Phytophthora TaxID=4783 RepID=D0N7S8_PHYIT) HSP 1 Score: 103 bits (258), Expect = 1.470e-21 Identity = 51/93 (54.84%), Postives = 70/93 (75.27%), Query Frame = 1
Query: 7 GGSNGTGLLWQSNNDIPFRKEILAKIVTYLQQRKPHARPEWIQKVPLMAKRLEDNLYRTARSFKEYKDHNTLRTRLQQLAARLGTNAQQRSKG 285
GGSN T WQS ND+P R++++ KIV+ LQQRKP A EWI+++P MA+RLED+LYRTA++ EY D ++L+TRLQ LA +G AQ ++ G
Sbjct: 456 GGSNDTQTAWQSENDLPLRRKMIGKIVSLLQQRKPDAPAEWIRRLPDMARRLEDSLYRTAKNRDEYGDFSSLKTRLQHLAVTMGARAQHKAGG 548
BLAST of mRNA_H-paniculata_contig3826.10026.1 vs. uniprot
Match: A0A2D4C1T6_PYTIN (KIX_2 domain-containing protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C1T6_PYTIN) HSP 1 Score: 102 bits (253), Expect = 5.910e-21 Identity = 49/92 (53.26%), Postives = 71/92 (77.17%), Query Frame = 1
Query: 13 SNGTGLLWQSNNDIPFRKEILAKIVTYLQQRKPHARPEWIQKVPLMAKRLEDNLYRTARSFKEYKDHNTLRTRLQQLAARLGTNAQQRSKGG 288
S+G+ WQS ND+P R++++ KIV+ LQQRKP A EWI+++P MA+RLED+LYRTA++ +EY D ++L+TRLQ LA +G AQ ++ GG
Sbjct: 361 SDGSQTAWQSENDLPLRRKMIGKIVSLLQQRKPDAPAEWIRRLPDMARRLEDSLYRTAKNREEYGDFSSLKTRLQHLAVTMGARAQHKAGGG 452
BLAST of mRNA_H-paniculata_contig3826.10026.1 vs. uniprot
Match: A0A0P1ARY7_PLAHL (Coactivator CBP, KIX domain n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ARY7_PLAHL) HSP 1 Score: 102 bits (253), Expect = 5.920e-21 Identity = 50/93 (53.76%), Postives = 69/93 (74.19%), Query Frame = 1
Query: 7 GGSNGTGLLWQSNNDIPFRKEILAKIVTYLQQRKPHARPEWIQKVPLMAKRLEDNLYRTARSFKEYKDHNTLRTRLQQLAARLGTNAQQRSKG 285
GG N T WQS ND+P R++++ KIV+ LQQRKP A EWI+++P MA+RLED+LYRTA++ EY D ++L+TRLQ LA +G AQ ++ G
Sbjct: 171 GGGNDTQSAWQSENDLPLRRKMIGKIVSLLQQRKPDAPAEWIRRLPDMARRLEDSLYRTAKNRDEYGDFSSLKTRLQHLAVTMGARAQHKAGG 263 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3826.10026.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3826.10026.1 >prot_H-paniculata_contig3826.10026.1 ID=prot_H-paniculata_contig3826.10026.1|Name=mRNA_H-paniculata_contig3826.10026.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=257bp GNGGSNGTGLLWQSNNDIPFRKEILAKIVTYLQQRKPHARPEWIQKVPLMback to top mRNA from alignment at H-paniculata_contig3826:9435..13538+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3826.10026.1 ID=mRNA_H-paniculata_contig3826.10026.1|Name=mRNA_H-paniculata_contig3826.10026.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4104bp|location=Sequence derived from alignment at H-paniculata_contig3826:9435..13538+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3826:9435..13538+ >mRNA_H-paniculata_contig3826.10026.1 ID=mRNA_H-paniculata_contig3826.10026.1|Name=mRNA_H-paniculata_contig3826.10026.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1542bp|location=Sequence derived from alignment at H-paniculata_contig3826:9435..13538+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |